NO02G01910, NO02G01910 (gene) Nannochloropsis oceanica

Overview
NameNO02G01910
Unique NameNO02G01910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2190
Alignment locationchr2:547949..550138 -

Link to JBrowse

Properties
Property NameValue
DescriptionFucosyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:547949..550138 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019378GDP-Fuc_O-FucTrfase
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Homology
BLAST of NO02G01910 vs. NCBI_GenBank
Match: EWM30443.1 (fucosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 819.7 bits (2116), Expect = 5.900e-234
Identity = 409/582 (70.27%), Postives = 455/582 (78.18%), Query Frame = 0
Query:   16 EGSADFPDASGAGSDFEDSSLSSSLRKEAAESWPNCVGRGAWVLTFLLLVAGVVGFSMVAFSQGLLEPVGQHSPLATLRGATNSKSLAPAELRVAASRNSANDNAAAPSLPSDNAEKKKKTKKKDIFNSVEAVDKVWVDEEENPFDKDWETFPPSELADHCGVSDIFYWQRYDEEILAAAAADGAAVEVKNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREKMEMIEMKDFLEAEATSGHLGPLPPGNRTDLESGELWSYLNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKEQQERLDLFCGKREPVFYDKAMQEAKVIHFGSGEDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            E S+D+ DASG+ SD EDSS+     KE+   W NC GR  WVL  L+ VA  +GF MV+FSQ         +P A LRG    + +AP  L          D A +P        ++KK KKKD+FNSV +VDKVWVDEE NPFDK+WE FPPSELADHCG SDIFYWQRYD ++           +V NPWA LGPE+KYVTFEPD GGWNNIRMAMEVVLVFAYATGRTLVMPPEQ MYLLNKG  P DN LHF+DFFYL+RL+EKMEMIEMKDFLE EA +G+LG LPP N TDL    LW YL GL  G   W PF VC+AF ETPGK +E+HS EQQERL  FCGKR PV Y++ +Q+AKVIHFG+G+  RVLAHFYTFEHFMDPALD+AVKRFVR+YIHYRDEVFCAAGRIIAAMET AGPGG+KALHIRRGDLQFKEVKIPAE+II  TKDIL E ETIY+ATDE D AYLDV R RFNV+FL DFHERVGL KLNQNYMGM+EQIVCSRSQVFIGTWFSTFTGYITRMRGY GFDYR+NWYH+ LRKDSFQTEY+ RDPWYVREWPEGWV+ID
Sbjct:   12 EESSDYVDASGSDSD-EDSSVLGHGLKESQAEWLNCTGRRPWVL--LVFVASAIGFVMVSFSQETTVSSRSFTPFAALRG-VYPRMVAPPVL---------GDAAISP--------REKKIKKKDVFNSVNSVDKVWVDEEANPFDKNWEKFPPSELADHCGASDIFYWQRYDPDL----------EKVVNPWAALGPEKKYVTFEPDRGGWNNIRMAMEVVLVFAYATGRTLVMPPEQNMYLLNKGSDPGDNTLHFADFFYLHRLQEKMEMIEMKDFLETEAVTGNLGALPPSNSTDLRRDVLWKYLEGLEVGTTHWKPFDVCLAFPETPGKPIEDHSAEQQERLKEFCGKRTPVHYNETLQDAKVIHFGAGQGSRVLAHFYTFEHFMDPALDRAVKRFVRSYIHYRDEVFCAAGRIIAAMETEAGPGGYKALHIRRGDLQFKEVKIPAEKIIANTKDILKENETIYIATDETDEAYLDVFRKRFNVFFLKDFHERVGLPKLNQNYMGMLEQIVCSRSQVFIGTWFSTFTGYITRMRGYYGFDYRTNWYHFGLRKDSFQTEYHPRDPWYVREWPEGWVNID 562          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: OEU12260.1 (hypothetical protein FRACYDRAFT_210969 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 298.1 bits (762), Expect = 6.000e-77
Identity = 158/425 (37.18%), Postives = 239/425 (56.24%), Query Frame = 0
Query:  203 EVKNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLL--NKGDAPDDNKLHFSDFFYLN--RLREKMEMIEMKDFLEAEATSGHLGPLPPGNRTDLESG---------------ELWSYLNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKEQQERLDLFCGKREPVFYDKAMQEAKVIHFGSGE-DMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA----------GPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            E   P+A  G + KY+TF  D GGWNN+RM+ME++ V A A GRTLV+PP++ +Y L  +KG    + +  F+DFF L      +K++ I   +F++ E   G   P+P     ++ +                 L  YLN  G  P   +    C+ F +    A    + + +  +  FCG R+P  +   + +  +IHF + E + R+LAHFY   HF DP++D   KRFVR+++HY D+++CAAG+I+ A++             G G F A+HIRRGD Q+K+VKI AE+  E TK++    E IY+ATDE+D ++ D +    ++ FL+D+ +   LG ++ NY GM++ IV SR++ F GTWFSTFTGYI RMRGY+G   + +WY +  +K             Y  EWP+GW+ ID
Sbjct:   57 EFVTPFAPKGTDEKYITFSTDRGGWNNVRMSMEIIFVIAAALGRTLVLPPKEPLYRLAADKG----NKQRGFADFFPLGTPEFAKKVKTISTAEFIKREGGPGGRVPIPVEMIENVTNSALVCEHRKKSKNFCDHLTGYLNSAGYVPDINS--DSCIIF-DNDLYAGNSKTNQTESSISSFCGSRKPFTWTSELNDHTLIHFRAQEKEWRLLAHFYNAIHFTDPSVDNYFKRFVRDFLHYNDQIYCAAGKIVKALQIEGIERGFNPDEEGGGIFSAMHIRRGDFQYKKVKISAEKWYENTKEVWKPNEIIYIATDERDKSFFDPIAKHHDIRFLDDYWDLASLGDIDPNYFGMIDTIVSSRARAFAGTWFSTFTGYINRMRGYHGMSMKDSWYSFLEKKTKLHAWENMNISAYAYEWPDGWIGID 474          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: GAX19490.1 (hypothetical protein FisN_19Hh065 [Fistulifera solaris])

HSP 1 Score: 285.0 bits (728), Expect = 5.300e-73
Identity = 153/433 (35.33%), Postives = 243/433 (56.12%), Query Frame = 0
Query:  204 VKNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREKMEMIEMKDFLEAEATSGHLGPLP----------------PGNRTDLESGELWSYLNGLGQGPVRWNPFKV--CVAFTETPGKAVEEHSKEQ-QERLDLFCG-KREPVFYDKAMQEAKVIHFGSG-EDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA------------------GPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            +++P++   P  +YVTF PD GGWNN+RM++E++ V A ATGRTLV+PP++ +YL++   A  +    F DFF L +L   + ++  +DF E    S H  P+P                  + ++     ++ YL   G   V  N   V  C+ F ET     +  +     E +   CG  R+ V++ + M +  ++ F +G +  R+L HFY   HF +P  D   +RFVR+Y+HY + ++CAAG+I+ A++  A                  G GG+ ALH+RRGDLQ+K+VKIPA+E  + TKD+    E +Y+ATDE+D ++ + ++    + FL+D+ +   L  L+ NYMGM++ IV SR + + GTWFSTF+GYI R+RGY+G   + +WY +  +K++        +  Y  EWP+GW+ ID
Sbjct:  169 LRSPFSTKKP-HQYVTFSPDRGGWNNVRMSLEIIFVIAAATGRTLVLPPKEPLYLMHHDKA--NRYRGFGDFFPLEQLHPVVPVLSFQDFFE----SPHRPPVPSHIDEAAIQKAADHCDKRDASENACRHVFDYLEATG---VHQNISAVHTCMIFDETAYVTGKPPTNATILEHVQQVCGPTRDQVYFTQEMNDPDILFFAAGNKTFRLLTHFYGMIHFTNPVYDNYFRRFVRDYLHYHEAIYCAAGKIVKAIQKEAALLNANITDPKYAVRGEDGSGGYSALHVRRGDLQYKKVKIPAQEWYDNTKDVWYPKELLYIATDERDKSFFNDIKKHHELRFLDDYWDLANLSSLDPNYMGMIDTIVASRGRAYAGTWFSTFSGYINRLRGYHGLSMQDSWYGFLPKKEAVHEWKLVNEFAYAYEWPDGWIGID 591          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: GAX16485.1 (hypothetical protein FisN_19Lh065 [Fistulifera solaris])

HSP 1 Score: 284.6 bits (727), Expect = 6.900e-73
Identity = 154/432 (35.65%), Postives = 241/432 (55.79%), Query Frame = 0
Query:  204 VKNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREKMEMIEMKDFL-----------EAEATSGHLGPLPPGNRTDLESG--ELWSYLNGLGQGPVRWNPFKV--CVAFTE---TPGKAVEEHSKEQQERLDLFCG-KREPVFYDKAMQEAKVIHFGSG-EDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA------------------GPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            +++P+A   P ++YVTF PD GGWNN+RM++E++ V A ATGRTLV+PP++ +YL++      +    F DFF L +L   + ++  ++F            + +  + H        R   E+    ++ YL   G   V  N   V  C+ F E     GK     +    E +   CG  R+ V++ + M +  ++ F +G +  R+L HFY   HF +P  D   +RFVR+Y+HY + ++CAAG+I+ A++  A                  G GG+ ALH+RRGDLQ+K+VKIPA+E  + TKD+    E +Y+ATDE+D ++ D +R    + FL+D+ E   L  L+ NYMGM++ IV SR + + GTWFSTF+GYI R+RGY+G   + +WY +  +K++        +  Y  EWP+GW+ ID
Sbjct:  179 LQSPFATTQPHQQYVTFSPDRGGWNNVRMSLEIIFVIAAATGRTLVLPPKEPLYLMHHDKT--NRYRGFGDFFPLEQLHPIVPVLSFQEFFTNNPHRPSVPSQMDEAAIHKAADHCDKRDASENACRHVFEYLEATG---VHQNISAVHTCLIFDEMAYVTGK--PPTNATILEHVQQVCGPTRDHVYFTQEMNDPDILFFAAGNKTFRLLTHFYGMIHFTNPVFDNYFRRFVRDYLHYHEAIYCAAGKIVKAIQKEAALLNANITDPKYAVSAEDGSGGYSALHVRRGDLQYKKVKIPAQEWYDNTKDVWYPKELLYIATDERDKSFFDDIRKHHELRFLDDYWELADLSSLDPNYMGMIDTIVASRGRAYAGTWFSTFSGYINRLRGYHGLSMQDSWYGFLPKKEAVHEWKLVNEFAYAYEWPDGWIGID 603          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002287896.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95339.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 281.2 bits (718), Expect = 7.600e-72
Identity = 172/481 (35.76%), Postives = 248/481 (51.56%), Query Frame = 0
Query:  178 VSDIFYWQ----RYDEEILAAAAADGAAVEVKNPWAKLGPE--RKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFF--YLNRLREKMEMIEMKDFL-------------EAEATSGHLGPLPPGNRTDLES---GELWSYLNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKEQQERLDLFCGKREPVFYDKAMQEAKVIHF--GSGEDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA----------GPGGFKALHIRRGDLQFK-------------------------EVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            V+ + YW     + DEE +             +P+    PE   KY+TFE D GGWNNIRM+MEVV V A ATGRTLV+PP Q MYLL       +N++ + DFF  +    ++++++IEM+DFL             +A+A    L        T   S    +++  L   G    +    K C+ F E    A +  +    +++  FC  R P++Y K M E  ++HF   S +D R+L HFY   HF  P++D   KRFVR++IHY D ++CAAG+II A++             G GG+ A H+RRGDLQ+K                         EV IPAEE  E T  +    E +Y+ATDEKD ++ D +    ++ +L D+    GL K++ N+MGMVE +VCSR ++F+GTW STF+ YI R+RGY G    SN+Y +  R+       Y    +  RE+P  W+ ID
Sbjct:  341 VNSLAYWNSPQGKRDEEFI-------------SPFKVSAPEGKTKYLTFEADPGGWNNIRMSMEVVFVIAAATGRTLVLPPPQRMYLL-------ENRIMYDDFFPLFTEAFQKRVKVIEMEDFLGKVLEKEGILEMNDADAKKDLLRIAKSCELTRKSSDACDKIYEILREKGY-VAQVKDSKNCLIFDE---NAYQNGAAPVTQQISRFCADRAPLYYSKEMAEPDILHFHTSSDDDFRILNHFYAVIHFTKPSIDNYYKRFVRDFIHYHDNIYCAAGKIIQALQDEGRQRGFNTDEEGGGGYSAWHVRRGDLQYKEGNRRHRFSLMSCHDHYLTTSSLLHEVIIPAEEWWENTAKLWQPKEILYIATDEKDTSFFDPIAKHHDIRYLKDYWVHAGLDKMDPNFMGMVEIVVCSRGRLFVGTWHSTFSSYIMRLRGYYGASKVSNYYSFKPRRFWMHKWSYPGGNYAAREFPIAWLGID 797          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002185959.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65429.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 279.3 bits (713), Expect = 2.900e-71
Identity = 189/529 (35.73%), Postives = 265/529 (50.09%), Query Frame = 0
Query:  144 SVEAVDKVWVDEEENPFDKDW--------ETFPPSELADHCGVSDIF-----YWQRYDEEILAAAAADGAAVEVKNPW-AKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREK---MEMIEMKDFLEAEATSG-----HLGPL--PPGNRTDLESGE---LWSYLNGLGQGPVRWNPFKVCVAF------------------TETPGKAVEEHSKEQQERLDL---------FCGKREPVFYDKAMQEAKVIHFGSGEDMRV--LAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAAGP--------GGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYN-------GFD---YRSNWYHYSLRKDSFQTEYYS-RDPWYVREWPEGWVDID 598
            SV   D++   +E  P ++D+         T      ADH G  D F     YWQ    +            +  +P+ +K G  R+Y+TFEPD GGWNNIRMAME VL    A GRT+V+PPEQ MYLL K          F+DFF ++ L  +   +EMI M++FL+AEA +G     H G +  PP NRTD +  +   L  +L+ +   P  W P K   AF                   +  G  ++EH  E    +D             ++E   YD+ MQ+  V+HF     +RV  L HFY F  F D   D  +KRF+R+++ Y D + C A RI+ A+   A          G F   H+RRGD QFK  +I AE+I+  T+D L EG  IY+ATDE+D A+ D L+  ++V F++DF     L  +N NY GM++Q+V SR Q F G W STFTG+I R+RGY+       GF+     + +Y+ +L       EY      ++ RE+P  W DID
Sbjct:  107 SVAQYDRMHEADEGEPIERDYSGAEESDRSTLAGLSCADHGGPLDEFAREMVYWQDISSD-----------SQYTSPFRSKSGQPRRYMTFEPDGGGWNNIRMAMETVLGLGIAMGRTVVLPPEQRMYLLAKDRGRQKTDFGFADFFPMHELATENAGLEMITMQEFLQAEAMTGNLRDKHTGQISFPPENRTDWDGQDVKPLKEWLHNVTHTPF-WAPEKCMAAFPASGNHKDVEVLKSMLEQIQKDGGPLQEHVLENPTPVDATPIERMRENLARRKELCVYDETMQKEPVVHFMCNHRLRVRMLVHFYAFLFFEDWREDLWMKRFMRDHMRYIDAIQCPAARIVHALREYARQKDPVNNPRGDFDTFHVRRGDFQFKRTRISAEDILSNTRDELTEGAVIYIATDERDKAFFDPLKQFYDVKFMDDFKNE--LANVNTNYYGMIDQLVASRGQKFFGCWHSTFTGFIARIRGYHSVKDNLAGFEKGTLPTTFYYATLANKYVMHEYAPLHGAFFNREFPISWRDID 621          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: CBN75327.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 278.1 bits (710), Expect = 6.400e-71
Identity = 166/440 (37.73%), Postives = 231/440 (52.50%), Query Frame = 0
Query:  216 KYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREKMEMIEMKDFLEAEATSGHLGPLPPGNRTDLESGE-LWSYLNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKEQQERLDLF-CGKREPVFYDKAMQEAKVIHF----GSG-EDMRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAAG--PG--------------------------------------------GFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLR-KD----SFQTEYYSRDPWYVREWPEGWVDID 598
            +YVTFEPDHGG+NNIRMAMEV+LVFA  TGRTLVMP  Q  YLLN+        + F+D F +  L + M++I M++FL+ E  +G LG +PPGN++   S E +  YL  +      W+     + F  +P        +E Q  L  F   KR  + Y + MQ A+ IHF    G G E+ R+  HFYTF  F DP   +  +R VR+ +H+R+ +FCAA  I+  +  A G  PG                                            GF   HIRRGD Q+  +K PAE I   TKD++  GE +++ATDE+   + DV      V++L+DF +   L  ++ +Y  M++ IV S+ + FIGTW STFTGYITR+RGY  F    +WY +    KD    S   +   R P+++REWP  W D+D
Sbjct:  140 QYVTFEPDHGGFNNIRMAMEVMLVFARETGRTLVMPAAQKFYLLNR------PAVEFADMFPIEYLSDYMDVITMEEFLKKEGLTGRLGKVPPGNKSSGHSKEAVQDYLREVADVVPHWHHMDEALIFGPSPEVPKVPDDEESQAWLQEFLTDKRRQLDYGEDMQRARHIHFRTSPGQGREEYRLFTHFYTFVGFSDPVAARHHRRLVRDLVHFRESLFCAAATIVGRLRAAGGGDPGNWSGYYGEWGGLGEREGWVGGGEVXXXXXXXXXXXXXXXXXXXAGFSTFHIRRGDFQYVRMKPPAETIAGATKDLIQPGEVLFIATDERKKEFFDVFTHEHRVFYLDDFQD--VLEGIDPSYYLMIDTIVASQGRTFIGTWRSTFTGYITRLRGYYRFPTEFSWYFWDESVKDYIPKSLVEDAVPRSPFFMREWPVAWEDLD 571          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: XP_002185932.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65402.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 275.4 bits (703), Expect = 4.200e-70
Identity = 162/443 (36.57%), Postives = 237/443 (53.50%), Query Frame = 0
Query:  216 KYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREK---MEMIEMKDFLEAEATSGHLG------PLPPGNRTDLESGE------LWSYLNGLGQGPVRWNPFKVCVAFTETP--------------------------GKAVEEHSKEQQERLDLFCGKREPVFYDKAMQEAKVIHFGSGEDM--RVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAM-------ETAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYR---------SNWYHYSL--RKDSFQTEYYSRDPWYVREWPEGWVDID 598
            +Y+TFEPDHGG+NNIRMAME VL  A+A GRTLV+PPE+ MYLL+K    + N   F  FF++  +  +   + +I M+++LE EA +GH          PP NRT  +         L+ +L  + Q  V WNP +    F  +                           GK     +  +    +   G++E   Y++ +Q A+ IHF +   M  R+L HFY F  F D   D  +KRF+R+++ Y DE+ CAA R++AA+         A   G F + HIRRGD Q+K+ ++ A EI +  K  L E ET+Y+ATDE++  +   L+  +NV+FL+DF     L  +N NY GM++Q+V SR  +F G WFSTFTGYI R+RGY+    +         ++WY Y+L  R D  Q+ Y  +  +Y RE+P  W  +D
Sbjct:  129 EYLTFEPDHGGFNNIRMAMETVLALAFAMGRTLVLPPEKRMYLLDKDS--ERNHFGFDHFFHMEAIHNEHTGLNIITMQEYLEREAMTGHFRDGDGNVAFPPSNRTQWDGANPDEIDTLFYWLRSVSQ-VVVWNPEECMAVFPASASHEDTQDLIRINSEVNAENVKWEDYVGKPFPIDASAKNRMKENRAGRQEICLYNETLQAAQRIHFPTDHSMSARLLVHFYAFLFFQDWKQDLWMKRFIRDHVRYMDEIQCAAARVVAAVRQKARAYNNANTEGSFSSFHIRRGDFQYKKTRVEATEIYDMAKRRLAENETVYIATDERNIGFFQPLKGHYNVFFLSDFASE--LAGVNTNYYGMIDQLVTSRGSIFFGCWFSTFTGYINRIRGYHADQQKLPGYEQGIVNSWY-YTLPDRFDHMQSFYPVKQAFYAREFPSSWRLLD 565          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: EJK53273.1 (hypothetical protein THAOC_27317 [Thalassiosira oceanica])

HSP 1 Score: 270.8 bits (691), Expect = 1.000e-68
Identity = 174/454 (38.33%), Postives = 245/454 (53.96%), Query Frame = 0
Query:  214 ERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFS--DFFYLNRL---REKMEMIEMKDFLEAEATSGHLG-------PLPPGNRT---DLESGELWSYLNGLGQGPVRWNPFKVCVAFTETPGKAVEEHSKEQQERLDLFCGKR--------EPV-----------------------FYDKAMQEAKVIHFGSGEDMRV--LAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAA--------GPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDF-HERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYR-----------SNWYHYSLRKD-SFQTEYYS-RDPWYVREWPEGWVDID 598
            ++KY+TFEPD GG+NNIRM++E +++ A+A GRTLVMPP QGMYLL K    D  ++HFS  DF++L ++      +++I M++FL+ E  +G+L          PP NRT    L+  EL  YL G+   P+ W P +  VAF    G+   EH KE ++      G++         PV                        YD+ MQEA V+HF     MRV  L HFY F  F D   D   KRFVR+++ Y DE+ CAA RI+AA+   A          G + + HIRRGD Q+K  ++ A++I + TKD L EG T++VATD +   +   L   +++ FL DF HE  G   +N NY GM++Q+V SR + F G + STF+G+I RMRGY+  + R              Y+YS ++D     +YYS     Y RE+P  W DID
Sbjct:   23 KKKYLTFEPDGGGFNNIRMSLETMVLMAHAMGRTLVMPPSQGMYLLRKD--RDKQRVHFSFDDFYHLEQVGYEHAGLDIITMEEFLKTEGMAGNLRNKTTGTVVYPPNNRTKWDGLDPKELKEYLRGVTLTPLDWKPERCVVAFPSDDGR---EHFKELEDIFSEASGQKPKWAQFTDNPVAVDAPPQERLKESLRGGDVKNLCIYDEEMQEAPVVHFMCYHKMRVRFLTHFYAFLFFEDWRQDLWSKRFVRDHLRYSDEIQCAAARIVAALRKRARDRDPKGNPDGDYDSFHIRRGDFQYKNTRLEADQIYDNTKDELKEGSTVFVATDHQGKPFFKPLSDHYDLVFLKDFKHELEG---VNSNYYGMIDQLVASRGRTFFGCFHSTFSGFIFRMRGYHSQNDRLDDRAQALGIVPRSYYYSSKQDMRLYDKYYSVHGAVYSREYPVAWRDID 468          
BLAST of NO02G01910 vs. NCBI_GenBank
Match: EJK48474.1 (hypothetical protein THAOC_32723, partial [Thalassiosira oceanica])

HSP 1 Score: 270.4 bits (690), Expect = 1.300e-68
Identity = 157/421 (37.29%), Postives = 232/421 (55.11%), Query Frame = 0
Query:  216 KYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVMPPEQGMYLLNKGDAPDDNKLHFSDFFYL--NRLREKMEMIEMKDFLEAEATSGHLGPLPPGNRTDLESGELWSYLNGLGQ---------------------GPVRWNPFKVCVAFTE---TPGKAVEEHSKEQQERLDLFCGK-REPVFYDKAMQEAKVIHFGSGED--MRVLAHFYTFEHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAME----------TAAGPGGFKALHIRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRARFNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYITRMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID 598
            KY+TFEPD GG+NNIRM++E +LV A  TGRTLV+PP Q +YLL        +K+  SDFF +  ++ ++++++I M +FL+ E   G  G L    + D +   L +   G  Q                      PV+    K C  F +     G A    S   Q+ +  FCGK R PV+Y K      ++HF + +    R+L HFYT  +F DP +D   KRFVR+++HY D +FCAAG+I+ A++             G GG+ ALH+RRGDLQ+KEV I AEE   TT  +    E +Y+ATDE++  + +     + + +L ++ +  GL KL++  MGMVE +VCS +++F+GTW STF+GYITR+RGY G    +++Y +  R  S     +    +  REW   W+ ID
Sbjct:  349 KYLTFEPDPGGFNNIRMSLENILVIAAVTGRTLVLPPPQRIYLL-------QDKMQLSDFFPILNDKFQKRIKVITMSEFLQREMKEG--GYLYNVGKDDNDEATLLTLAEGCVQMKTGDKSCNKLNTILQRKGYMAPVK--DSKNCFVFDKYAFDRGPAAVT-SPRTQKLIAEFCGKERTPVYYTKGFHSPSILHFHTSDPNAYRLLNHFYTVIYFTDPKMDNFYKRFVRDFVHYNDAIFCAAGKIVHALQEEGRSRGDTVDGEGGGGYSALHVRRGDLQYKEVIISAEEWYNTTNKLWKPNELLYIATDERNHKFFEPFAKHYELRYLENYTKEAGLDKLDRALMGMVEIVVCSSARLFVGTWHSTFSGYITRLRGYYGRSKMTSYYSFRPRIFSMHKWQFPSGNYAAREWQSAWLGID 757          
The following BLAST results are available for this feature:
BLAST of NO02G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30443.15.900e-23470.27fucosyltransferase [Nannochloropsis gaditana][more]
OEU12260.16.000e-7737.18hypothetical protein FRACYDRAFT_210969 [Fragilario... [more]
GAX19490.15.300e-7335.33hypothetical protein FisN_19Hh065 [Fistulifera sol... [more]
GAX16485.16.900e-7335.65hypothetical protein FisN_19Lh065 [Fistulifera sol... [more]
XP_002287896.17.600e-7235.76predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002185959.12.900e-7135.73predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBN75327.16.400e-7137.73conserved unknown protein [Ectocarpus siliculosus][more]
XP_002185932.14.200e-7036.57predicted protein [Phaeodactylum tricornutum CCAP ... [more]
EJK53273.11.000e-6838.33hypothetical protein THAOC_27317 [Thalassiosira oc... [more]
EJK48474.11.300e-6837.29hypothetical protein THAOC_32723, partial [Thalass... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL020nonsL020Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL016nonsL016Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR032ncniR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR005ngnoR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR002ngnoR002Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR000ngnoR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK006853NSK006853Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO02G01910.1NO02G01910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|522717gene_775Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100100g8gene221Nannochloropsis gaditana (N. gaditana B-31)gene
Naga_100013g21gene187Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO02G01910.1NO02G01910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO02G01910 ID=NO02G01910|Name=NO02G01910|organism=Nannochloropsis oceanica|type=gene|length=2190bp
ACAGCCGCCGCCACAATGCGACGTCGGCCTGTCGAGGATGATGACACCAG
CGATCATTCAGAAGGCTCAGCAGATTTTCCCGATGCCTCAGGTGCGGGCT
CAGACTTCGAGGACAGCTCTCTCTCTAGCAGCCTGCGGAAAGAAGCAGCT
GAGAGCTGGCCCAACTGCGTTGGGCGTGGCGCATGGGTCCTGACCTTCTT
GCTCCTGGTCGCGGGTGTGGTGGGCTTTAGCATGGTAGCCTTTTCTCAAG
GTCTATTGGAGCCGGTAGGGCAGCACAGCCCTTTGGCGACCTTACGGGGT
GCGACTAACTCAAAGAGCTTGGCCCCCGCGGAGCTGCGCGTGGCTGCAAG
CCGCAACAGCGCGAATGATAACGCAGCAGCACCATCCTTACCATCTGACA
ATGCCGAAAAGAAGAAAAAGACTAAGAAAAAGGATATATTCAATAGCGTG
GAGGCCGTCGACAAGGTGTGGGTGGATGAGGAGGAAAATCCCTTTGACAA
GGACTGGGAGACGTTCCCCCCCTCCGAGCTCGCGGACCACTGCGGTGTCT
CGGATATTTTCTACTGGCAGCGTTACGATGAAGAGATCTTGGCTGCTGCC
GCCGCAGACGGGGCGGCGGTGGAGGTGAAGAACCCTTGGGCAAAGTTGGG
ACCGGAGAGGAAGTATGTGACGTTTGAGCCGGACCATGGGGGGTGGAATA
ACATCCGAATGGCTATGGAGGTCGTCTTAGTTTTCGCTTATGCTACTGGA
CGAACGTTGGTAATGCCACCGGAGCAAGGAATGTATCTATTGAACAAGGG
CGATGCCCCCGACGACAATAAGTTACACTTTTCTGACTTCTTTTACTTGA
ACCGGCTGCGGGAGAAGATGGAGATGATCGAAATGAAGGACTTCTTGGAG
GCAGAGGCCACGTCAGGCCATCTTGGACCGCTTCCCCCTGGTAATCGCAC
GGACCTGGAAAGTGGCGAGCTATGGAGTTATTTGAATGGTCTGGGACAGG
GGCCAGTGCGCTGGAACCCTTTCAAGGTGTGTGTGGCTTTTACTGAGACT
CCGGGCAAGGCCGTAGAGGAGCATTCGAAGGAGCAGCAGGAGAGGTTGGA
CTTGTTTTGTGGGAAGCGAGAGCCAGTATTTTATGATAAGGCGATGCAGG
AGGCCAAGGTGATTCATTTCGGGTCGGGCGAGGACATGCGTGTGTTGGCG
CATTTTTACACTTTCGAGCACTTCATGGACCCGGCTTTGGATAAGGCGGT
GAAACGATTTGTCAGgtatgactgtatggacagagggacagaagaagagg
gtgattataaaggtttgtgggatagatgctttgtattgaattgaatggaa
cgtccccggacttgacagctgcacgccctcctcctgtgtgtgcattctct
ttttttccgtcctccctccctccaataggacacctttcacacgacccaca
cataaacatatgttgccactttctttatgtgttcccctttaccatacagA
AACTACATACATTACCGCGACGAGGTCTTTTGCGCGGCCGGCCGGATCAT
TGCGGCAATGGAGACAGCTGCTGGCCCCGGGGGATTCAAAGCCCTCCACA
TTCGCCGGGGAGACTTGCAATTTAAGGAGGTCAAGATCCCTGCAGAAGAG
ATCATTGAGACCACCAAGGATATTTTGAATGAGGGGGAGACGATTTACGT
TGCCACGGACGAGAAGGACGCGGCTTATTTGGATGTGCTAAGGGCGCGAT
TTAATGTGTATTTTTTGAATGATTTCCACGAGAGGGTGGGTTTGGGGAAG
CTAAATCAGAATTATATGGGCATGGTGGAGCAGATTGTGTGCTCGCGGTC
GCAGGTCTTCATTGGGACGTGGTTCTCGACGTTCACGGGGTATATTACCC
GGATGCGCGGGTACAATGGGTTTGATTATCGCTCGAATTGGTATCATTAT
AGTCTGCGGAAAGACTCGTTTCAGACGGAGTACTACTCACGGGACCCCTG
GTATGTCCGTGAATGGCCGGAAGGATGGGTGGATATTGATTAATCGGAGA
CATGATTAGGAATGGAGGGCGGTGGGGAGGAGGATAGAGGAAGAAGGAGG
ATGCAGGGAAAGTATGCATGCATGTAAACCAAGGGAAAAAGAGGGAACAC
AAGAAAAAGAAAAAATAAGTCGACAATAGAATCAAGAAGC
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protein sequence of NO02G01910.1

>NO02G01910.1-protein ID=NO02G01910.1-protein|Name=NO02G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=598bp
MRRRPVEDDDTSDHSEGSADFPDASGAGSDFEDSSLSSSLRKEAAESWPN
CVGRGAWVLTFLLLVAGVVGFSMVAFSQGLLEPVGQHSPLATLRGATNSK
SLAPAELRVAASRNSANDNAAAPSLPSDNAEKKKKTKKKDIFNSVEAVDK
VWVDEEENPFDKDWETFPPSELADHCGVSDIFYWQRYDEEILAAAAADGA
AVEVKNPWAKLGPERKYVTFEPDHGGWNNIRMAMEVVLVFAYATGRTLVM
PPEQGMYLLNKGDAPDDNKLHFSDFFYLNRLREKMEMIEMKDFLEAEATS
GHLGPLPPGNRTDLESGELWSYLNGLGQGPVRWNPFKVCVAFTETPGKAV
EEHSKEQQERLDLFCGKREPVFYDKAMQEAKVIHFGSGEDMRVLAHFYTF
EHFMDPALDKAVKRFVRNYIHYRDEVFCAAGRIIAAMETAAGPGGFKALH
IRRGDLQFKEVKIPAEEIIETTKDILNEGETIYVATDEKDAAYLDVLRAR
FNVYFLNDFHERVGLGKLNQNYMGMVEQIVCSRSQVFIGTWFSTFTGYIT
RMRGYNGFDYRSNWYHYSLRKDSFQTEYYSRDPWYVREWPEGWVDID*
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Synonyms
Publications