Naga_100013g21, gene187 (gene) Nannochloropsis gaditana

Overview
NameNaga_100013g21
Unique Namegene187
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:512466..514187 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100013g21
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:512466..514187 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01910NO02G01910Nannochloropsis oceanica (N. oceanica IMET1)gene
NO02G01800NO02G01800Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna196rna196-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna196rna196Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna196

>rna196-protein ID=rna196-protein|Name=rna196|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp
MVLQNAPDTILHSLKASLSAQISNQRSSEETHYAGFQEATSNLAAPEAVA
TELVSETLAVRSSFDVARKGGALQEFGDFYDISSWEKYLEVMPMHEYLKK
EGLTGGLKNKERPPGNATTFDRQKTLWDYIRRATDVFPVGPDAHVVAFGL
PAHVNTSKALHEYHPEADAIIDGRNLLCYGSDLHARKSLHFTSMYNGGKR
YLAHFYGFLYFADQKVDAFMKRFVRDHMHYRNDIFCRATKVIDLLRRNAS
DKNGGYDAIHIRRGDFQFKEARLDIEDIFKAVEDVIDPGSLVYIVTDEKN
STLFDPVRDLYRLRFYEDFYKAAGLEDMDPNLTGMVEQIIASGARTFVGT
YFSTFTAFITRMRGYLGRNPGFYYLEKFKYALQSPGKNFYASGANFVREW
PVAYTNLDLA
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Synonyms
Publications