NO08G03460, NO08G03460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO08G03460 vs. NCBI_GenBank
Match: EWM26795.1 (SH2 domain protein [Nannochloropsis gaditana]) HSP 1 Score: 192.2 bits (487), Expect = 7.400e-45 Identity = 265/609 (43.51%), Postives = 307/609 (50.41%), Query Frame = 0 Query: 351 RRVISCYQPLQGWLPSVDLEVLFDKSPATSATI---QNXXXXXXXXXXXXXXXXXXXXXXXXXSSYKPDAGWRHLAGCLGRNEAESLLRPRPVGTFLLRRFDERSLRLSYRTQHSVEHAPIIFTSEGRWTHIRSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAPNTPRGSSSRNGGRERISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVQKAQLVGHQLQLQAPFPLVPPSIRPKTILRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQSFETLDELLKFFSKKAMHGLCFRRVPWTCEYEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPFVTVPTVEQVDGVFKDLNRVLKEVWMYDEKEKKTRSKSGGRRRVVLGEYKREGEGVQRAVEDEEVEQGALLGLCGHSHGRVLVALGLDSDAIESDGCSKGKEEEDKNEFMPGMSSVDLVESIIALDIKFCELLRSINTLLFVAGASCPSFTSTASQSSPXXXXXXXXADVLSHEKAEIQKKAYLQALRALGQWRPLLETLRLRFEAE 957 R ++ YQP +GWLPS DL VLF +SPA S T+ Q XXXXXXXXXXXXXXXXX GWRHLAG +GR AE LLR +P GTFLLRR+DERSLRLSYRT+ VEHAP++FT EGRW H+R XXXXXXXXXX + P+T R XXXXXXXXXXXXXXXXXXXXXXXXXXXX + +AQ GH QL APFP VP SIRP R XXXXXXXXXXPQSF +L+ELL FF +KA HGLCFRRVP TC+YE XXXXXXXXXXX + T P+ +V VFK L+ VL V D E++ R R R G G +EE +Q +LL LC S VL ALGL + S +G ++ M LVE I+ LD+K +LL +IN LL VA + XXXXXXXX QK A L+ALR LG+WRPLL+TLRLRF+ E Sbjct: 41 RVALASYQPPRGWLPSEDLAVLFGRSPAASVTLGVFQRQQLDRRREXXXXXXXXXXXXXXXXXXXXXXXXGWRHLAGSMGREAAERLLRAKPPGTFLLRRYDERSLRLSYRTRTGVEHAPLVFTREGRWAHVR-------------RVSTAGVASPGAXXXXXXXXXXFSPPSTAPXXXLRG--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXSTLPVSTHALFQAQAFGH--QLHAPFPSVPLSIRPAR--RMGRGSIGRSEGPLTSPFQPPPQSXXXXXXXXXXPQSFASLEELLSFFRRKAAHGLCFRRVPGTCDYE-ELSEGGDGRRKTGPWLGEQEGXXXXXXXXXXXRVLLGWFQRRISQPGTASAEGRGGPSKQEGGRKGKAQAQGGTCTEDTFPSSVEVVEVFKSLHEVLAAVGRRDGAERQGRGGVEARER-------EAGLGT-----EEEEDQMSLLRLCDQSAEPVLAALGLKT---VSPAPEEGPWRQEHGREGEAMDLAALVEKIVLLDMKIFQLLSTINRLLLVATSXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----QKTACLEALRVLGRWRPLLKTLRLRFQTE 603
BLAST of NO08G03460 vs. NCBI_GenBank
Match: CBJ48935.1 (RABSH2, a protein conserved in some stramenopiles (also in oomycetes), characterised by a combinatio [Ectocarpus siliculosus]) HSP 1 Score: 130.2 bits (326), Expect = 3.500e-26 Identity = 84/229 (36.68%), Postives = 109/229 (47.60%), Query Frame = 0 Query: 10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYVPAHVPRVLLAHKADLVNEAGCCVNDKLLEAY-KRAAGLTDWCWTVGHEYFGDY-VANR--------------------SNKSRPVADAVQLLVDHILLFRREGGGEEG 217 E+ K+L+VG GKTS +RR DK YV T+G DV V P G RPV LH WDV+ +L A HH LI G+ V+DV++RESL AVD W L+++ P ++L+ HKADL VND+ L Y A+G WC TVG +GDY VA R K V++AV+ L+ H+ R GG G Sbjct: 9 ELVLKVLLVGAPKAGKTSLVRRMCDKAFRE-DYVQTLGFDVTVVPY------------GTYQGRPVKLHLWDVAGSQLTAQPCHHGLIGQGAEGVLYVMDVTSRESLQAVDDWDQALSKFYPPWTCKLLVGHKADL---PAYVVNDEALSLYVAGASGFRGWCLTVGSSEYGDYDVAARRGGGSGATAHGARHKGQSLSGEKQLSVSEAVRTLLGHVF---RSGGAARG 218
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_009524750.1 (hypothetical protein PHYSODRAFT_489080 [Phytophthora sojae] >EGZ22033.1 hypothetical protein PHYSODRAFT_489080 [Phytophthora sojae]) HSP 1 Score: 129.8 bits (325), Expect = 4.500e-26 Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 KI +VGGAAVGKTS +RR++ + Y PTIGVDV T ++ + + LH WDVS E+ ASAS H+L+C ++ GIF V +V S+AA+D W+H L++Y+ P VP L++HKADL+ + +D + AY RAAG W WTVG FG+ + K+ V +A++ +V+ I Sbjct: 57 KIALVGGAAVGKTSIVRRWLQRSYPA-TYSPTIGVDV-------SSMTYKH------RGQELLLHVWDVSSAEVDASASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKEVPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKPNFGE-----NEKNPAVREALERMVEFI 228
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_008868874.1 (hypothetical protein H310_05820 [Aphanomyces invadans] >ETW02269.1 hypothetical protein H310_05820 [Aphanomyces invadans]) HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24 Identity = 74/196 (37.76%), Postives = 109/196 (55.61%), Query Frame = 0 Query: 10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 E+ K+ IVGG VGK+S +RR++ +P Y PTIGVDV T + G P+++ WDVS E V S + H L+CT + GIF V +V S+AAVDAWQ L +++ + +P LL+HKAD++ + +D ++AY R AG W WTVG G+ S+K+ V +A+ ++D I Sbjct: 44 ELHMKVAIVGGNGVGKSSIVRRWLKRPYQS-AYHPTIGVDV---------HTIKYSKRGASKDSPIYVDVWDVSCAE-VNSPAFHELLCTGLDGIFFVFNVHRVSSIAAVDAWQTALGKFISSSEIPFYLLSHKADMLQKRVMTSDD--IDAYVRTAGFKGWSWTVGRAGLGE-----SDKNPAVLEALDTMIDLI 221
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_008868875.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW02270.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24 Identity = 74/196 (37.76%), Postives = 109/196 (55.61%), Query Frame = 0 Query: 10 EVTEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 E+ K+ IVGG VGK+S +RR++ +P Y PTIGVDV T + G P+++ WDVS E V S + H L+CT + GIF V +V S+AAVDAWQ L +++ + +P LL+HKAD++ + +D ++AY R AG W WTVG G+ S+K+ V +A+ ++D I Sbjct: 44 ELHMKVAIVGGNGVGKSSIVRRWLKRPYQS-AYHPTIGVDV---------HTIKYSKRGASKDSPIYVDVWDVSCAE-VNSPAFHELLCTGLDGIFFVFNVHRVSSIAAVDAWQTALGKFISSSEIPFYLLSHKADMLQKRVMTSDD--IDAYVRTAGFKGWSWTVGRAGLGE-----SDKNPAVLEALDTMIDLI 221
BLAST of NO08G03460 vs. NCBI_GenBank
Match: OWZ18422.1 (hypothetical protein PHMEG_0007490 [Phytophthora megakarya]) HSP 1 Score: 124.8 bits (312), Expect = 1.500e-24 Identity = 74/193 (38.34%), Postives = 110/193 (56.99%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 KI +VGG+AVGKTS +RR++ + Y PTIGVDV + + + + L WDVS E+ ASAS HAL+C ++ GIF V +V S+AA+D W+H L++Y+ P +P L++HKADL+ + +D + AY RA G W WTVG FG+ + K+ V +A++ +V+ I Sbjct: 55 KIALVGGSAVGKTSIVRRWLQRSYP-TTYSPTIGVDV-------------STMTYNHRGQELLLQLWDVSSAEVDASASSLHALLCDDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYMSPKEIPCFLISHKADLLQKRVMTSDD--IAAYARAGGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 226
BLAST of NO08G03460 vs. NCBI_GenBank
Match: XP_024581186.1 (ras family protein [Plasmopara halstedii] >CEG44817.1 ras family protein [Plasmopara halstedii]) HSP 1 Score: 124.0 bits (310), Expect = 2.500e-24 Identity = 74/194 (38.14%), Postives = 113/194 (58.25%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRP-VADAVQLLVDHI 205 KI +VGG+AVGKTS +RR++ + + Y+PT+GVD VY + + + + L WDVS E+ ASAS H+L+C ++ GIF V +V S+AA+D W+H L++Y+ P P L++HKADL+ + +D + AY + AG W WTVG FG+ N+ RP V +A++ ++D I Sbjct: 80 KIALVGGSAVGKTSIVRRWLQRSYP-VTYLPTVGVD--VYSMKY-----------EHRGKELLLSIWDVSSAEVDASASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVITSDD--IAAYAKTAGYRGWMWTVGKATFGE------NEKRPAVREALERMIDFI 251
BLAST of NO08G03460 vs. NCBI_GenBank
Match: GAX94985.1 (Hypothetical protein PINS_002874 [Pythium insidiosum]) HSP 1 Score: 124.0 bits (310), Expect = 2.500e-24 Identity = 79/200 (39.50%), Postives = 111/200 (55.50%), Query Frame = 0 Query: 12 TEKILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKEL-VASASHHALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYVPA-HVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHILLFRR 210 T KI +VGG+AVGKTS +RR+ + + QY PTIGVDV LP + GD V + WDVS E+ +S HALIC + GIF V +V S+AA+D W+H L +Y+ A +P LL HKAD++ + +D + AY +AAG W WTVG FG+ + K V A++ +V+ +L R+ Sbjct: 83 TFKIALVGGSAVGKTSIVRRWTRRSFSS-QYSPTIGVDVHSLRLPHRR--------GD-----VIVQLWDVSSVEVDNTQSSLHALICDELDGIFFVCNVHRVSSIAAIDKWRHSLGKYISAREIPFFLLCHKADMIQKRIMSSDD--IGAYAKAAGYRGWMWTVGRPSFGE-----NEKHPAVMAALERMVECVLQERQ 261
BLAST of NO08G03460 vs. NCBI_GenBank
Match: ETI36488.1 (hypothetical protein F443_17410 [Phytophthora parasitica P1569]) HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 K+ +VGG AVGKTS +RR++ + Y PT+GV+V N + + LH WDVS E+ +SAS H+L+C ++ GIF V +V S+AA+D W+H L++Y+ P P L++HKADL+ + +D + AY RAAG W WTVG FG+ + K+ V +A++ +V+ I Sbjct: 74 KLALVGGPAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMTYKHRGQELLLHLWDVSSAEVDSSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 245
BLAST of NO08G03460 vs. NCBI_GenBank
Match: ETK76720.1 (hypothetical protein L915_16931 [Phytophthora parasitica] >ETL30151.1 hypothetical protein L916_16834 [Phytophthora parasitica] >ETP06312.1 hypothetical protein F441_17278 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 123.6 bits (309), Expect = 3.200e-24 Identity = 72/193 (37.31%), Postives = 109/193 (56.48%), Query Frame = 0 Query: 14 KILIVGGAAVGKTSFIRRFVDKPLAGLQYVPTIGVDVIVYPLPACQATARNITDGDDDARPVHLHFWDVSHKELVASASH-HALICTNVSGIFLVLDVSNRESLAAVDAWQHLLARYV-PAHVPRVLLAHKADLVNEAGCCVNDKLLEAYKRAAGLTDWCWTVGHEYFGDYVANRSNKSRPVADAVQLLVDHI 205 K+ +VGG AVGKTS +RR++ + Y PT+GV+V N + + LH WDVS E+ +SAS H+L+C ++ GIF V +V S+AA+D W+H L++Y+ P P L++HKADL+ + +D + AY RAAG W WTVG FG+ + K+ V +A++ +V+ I Sbjct: 74 KLALVGGPAVGKTSIVRRWLQRSYP-TTYSPTVGVEV-------------NTMTYKHRGQELLLHLWDVSSAEVDSSASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVMTSDD--IAAYARAAGYKGWMWTVGKANFGE-----NEKNPAVREALERMVEFI 245 The following BLAST results are available for this feature:
BLAST of NO08G03460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO08G03460 ID=NO08G03460|Name=NO08G03460|organism=Nannochloropsis oceanica|type=gene|length=3140bpback to top protein sequence of NO08G03460.1 >NO08G03460.1-protein ID=NO08G03460.1-protein|Name=NO08G03460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=957bpback to top Synonyms
Publications
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