NO04G03160, NO04G03160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G03160 vs. NCBI_GenBank
Match: EWM28789.1 (qb- vti1-family [Nannochloropsis gaditana]) HSP 1 Score: 263.1 bits (671), Expect = 8.100e-67 Identity = 145/226 (64.16%), Postives = 177/226 (78.32%), Query Frame = 0 Query: 8 MEEEYYRLSRAINKGIDEL-------GSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVFNYGVLARYRKND 227 M+EEYYRLSRAIN+G++EL G S M PS L R++AE+D+DLAEAEGQVK LE+E++ M DK++ R+K+ QFRNDL A+RRSF +AKA AE+ +L+Q + SGK K ERLM STEQL+DA+++V ETE +G+GII QME+QREQLVRASE+VQETNWFTRSARQVMNNMHLRA+RHKACLILII F +LIGIVFNYGVLARY K + Sbjct: 1 MQEEYYRLSRAINRGLNELTRGRLDGGGSIS----GGHDTMPPSRLLRLVAEIDLDLAEAEGQVKGLEIEVQDMPVKDKRMCREKVLQFRNDLKAMRRSFEAAKARAERHMLLQLSQVSGKRKNIAERLMSSTEQLHDARKVVDETEHIGEGIIYQMEAQREQLVRASEQVQETNWFTRSARQVMNNMHLRAVRHKACLILIIGFLLVLIGIVFNYGVLARYHKKN 222
BLAST of NO04G03160 vs. NCBI_GenBank
Match: CBN79289.1 (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) [Ectocarpus siliculosus]) HSP 1 Score: 90.1 bits (222), Expect = 9.400e-15 Identity = 67/215 (31.16%), Postives = 111/215 (51.63%), Query Frame = 0 Query: 9 EEEYYRLSRAINKGID--ELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPG-------------SGKLKG-----ATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILII 204 EE Y+R S +IN+ I+ +L + +V + P +DL EAE VK +E+E+R M +++ + + +Q R DL ALRRS A A+ L++++ G G L G A + L RS L D++R++ ETE +G G++ +ESQRE L+R+ V++T AR+++ ++ R +RH+ CL +I Sbjct: 21 EESYHRCSMSINRAINGIQLNNLVDAVGATSLP---------------LDLQEAEQHVKGMEIEVRSMKGNERRQCQSRANQCRADLKALRRSIDQAGQRAQAEELMRRSGGGAIGGGPRNFSESGGDLGGLGPDLAQQSLARSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRTSVRDTGAAAGQARRLLGSISRRELRHRLCLYAVI 220
BLAST of NO04G03160 vs. NCBI_GenBank
Match: OQR88372.1 (hypothetical protein THRCLA_10365 [Thraustotheca clavata]) HSP 1 Score: 82.8 bits (203), Expect = 1.500e-12 Identity = 67/219 (30.59%), Postives = 110/219 (50.23%), Query Frame = 0 Query: 3 DAHKHMEEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKK-------IYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVF 215 D +EE+Y RAIN I +L T + S+ +I ++ EA+ +K + VE+R + +K +YR++I+ F+ D L R+ AK + A ++ T RL R+++QL +KR+V ETED+G G+++ + QRE L+ A +KV+ET T AR+V+ M R + +K L +I+ I I +VF Sbjct: 2 DRFLSLEEDYIECKRAINNSIHDL-----------TQSNQKSSARQI---AQANIVEAQRCLKLMSVEIRGRSPAQRKEMQAKINVYREEIAGFQRD---LERAMLLAKDMPSNSSTQSDAARYDRIVTNTNRLQRASDQLEQSKRIVAETEDIGIGVMDTLAQQRETLLSAHDKVRETRELTGDARRVLLRMSQRVLTNKITLWFVIIVLIISICLVF 203
BLAST of NO04G03160 vs. NCBI_GenBank
Match: OQR81335.1 (hypothetical protein ACHHYP_16493 [Achlya hypogyna]) HSP 1 Score: 71.6 bits (174), Expect = 3.500e-9 Identity = 67/218 (30.73%), Postives = 107/218 (49.08%), Query Frame = 0 Query: 8 MEEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKG-----------ATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVF 215 +EE+Y R IN I +L S T A +R LA+ + EA+ +K + VE+R +K + KI+ +R+++ +R E+ +L+ AP + G T RL RS++QL +KR+V ETE +G +++ + QRE L+ A +KV+ET T AR+V+ M R + +K L +IV I I +VF Sbjct: 11 LEEDYVDCKRTINNCIHDL---------SQTDQKA---AARQLAQ--ATIVEAQRCLKLMAVEVRGRPPTLRKEMQAKINVYRDEIAGFQRDL-------ERAMLLGTAPPTAAATGNDLARYDRIVTNTNRLQRSSDQLEQSKRIVAETEQIGITVMDTLAQQRETLLSAHDKVRETRELTGDARRVLVRMGQRVLTNKITLWFVIVVLVISICLVF 207
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_012204138.1 (hypothetical protein SPRG_09203 [Saprolegnia parasitica CBS 223.65] >KDO25064.1 hypothetical protein SPRG_09203 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 70.1 bits (170), Expect = 1.000e-8 Identity = 63/219 (28.77%), Postives = 103/219 (47.03%), Query Frame = 0 Query: 8 MEEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGA------------TERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVF 215 +EE+Y R IN I +L +R LA+ + EA+ +K + VE+R + +K + KI+ +R+++ +R A +L++ P S A T RL RS++QL +KR+V ETE +G +++ + QRE L+ +KV+ET T AR+V+ M R + +K L +IV I I +VF Sbjct: 11 LEEDYIDCKRTINNCIHDL------------TQTDQKNAARQLAQ--ATIVEAQRCLKLMAVEIRGRSPTLRKEMQAKINVYRDEIAGFQRDLERA------MLLVKATPPSATASSANDAARYDRIVTNTNRLQRSSDQLEQSKRIVAETEQIGITVMDTLAQQRETLLSTHDKVRETRELTGDARRVLLRMSQRVLTNKITLWFVIVVLVISICLVF 209
BLAST of NO04G03160 vs. NCBI_GenBank
Match: ETN62886.1 (SNARE Vti1a protein [Anopheles darlingi]) HSP 1 Score: 68.6 bits (166), Expect = 2.900e-8 Identity = 46/175 (26.29%), Postives = 100/175 (57.14%), Query Frame = 0 Query: 47 SRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEK-----------RILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILI 211 +++++++D L E++ ++ + +E+R + + Y +++ ++ + L++ FG+AKA K I IQ+ +L TERL R++ LNDA R+ ETE +G +++ + QRE + R+ +++ET+ + +++N+M +RA+R K L+++I F+++ Sbjct: 34 NKLISDVDRQLEESQELLEQIGLEIRDIPQGSRAAYTSRLNCYQAEWKRLQQEFGNAKAARPKAGYDSSVDDFDEIGIQE-DQKRRLLDNTERLERTSNYLNDAYRVTIETEQIGAQVLSDLSQQRETIQRSRARLRETDADLSRSSRILNSMIMRAMREKFILVVVIAAIFLVL 207
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_009827441.1 (hypothetical protein H257_04567 [Aphanomyces astaci] >ETV82770.1 hypothetical protein H257_04567 [Aphanomyces astaci]) HSP 1 Score: 67.4 bits (163), Expect = 6.500e-8 Identity = 55/205 (26.83%), Postives = 103/205 (50.24%), Query Frame = 0 Query: 9 EEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIV 214 +EEY L+++++ I E+ S Y A+ +T D+ L +A ++ +E+E+R ++A K+ K+ Q++ L +L + KA +K L A ++ GAT++L ++ +++ A + V ETE+V GI ++ RE++ +KV+ N RS +++ M R R K L ++ F + I IV Sbjct: 9 DEEYKSLAQSVSSKISEIAS-YEEEPDKRRTAITHAT--------DL-LTQASQLIQQMELEVRSLDAATKRELSKKVDQYKKSLKSLSDDLKNIKAKEDKEGLFGSAEARSRMAGATQKLQQTGDRIKAAHQTVLETEEVAIGIQEELGRNREKIQATHDKVKGVNDMARSGGRILGRMSARDKRQKLILYGVMGFMVLAILIV 203
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_002949312.1 (Qb-SNARE, VTI1-family [Volvox carteri f. nagariensis] >EFJ49805.1 Qb-SNARE, VTI1-family [Volvox carteri f. nagariensis]) HSP 1 Score: 66.6 bits (161), Expect = 1.100e-7 Identity = 57/224 (25.45%), Postives = 113/224 (50.45%), Query Frame = 0 Query: 9 EEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAK---------AIAEKRILIQQAPG----------SGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIV 214 E EY S I++ I+ S++T ++ T + L E+D D+ EA+ +K +++E R + K ++K+ +++ DL +LR A+ A AE I Q G ++ A+ +L +S ++L K+++ ETE++G GI+ + +QRE ++ + + + + AR++++NM R +++K LI+ + F+L GI+ Sbjct: 12 ENEYCNKSTDISRKIN------SAIT------LSGETKRKKLVEVDADIKEADNIIKKMDMEARSVAPERSKQLQNKVKEYKADLASLREQLTKARTAAGSEYDAARAELSQNISQGLGIDYASSSQAQRDRMLSASAKLEQSNDRLQTGKKLLAETEELGSGILANLAAQREVIIHSRDTLHGADDNISKARKILSNMSRRMLQNK--LIMFGIIGFLLAGII 221
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_001693784.1 (Qb-SNARE protein, VTI1-family [Chlamydomonas reinhardtii] >PNW73902.1 hypothetical protein CHLRE_13g577500v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 66.2 bits (160), Expect = 1.500e-7 Identity = 56/217 (25.81%), Postives = 111/217 (51.15%), Query Frame = 0 Query: 15 LSRAINKGIDELGSKYSSVTCSPTPA--MAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAI--------AEKRILIQQAPGSG----KLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHK-----------ACLILIIVFQ 207 +S N+ +E +K + ++ T A + + L E+D+D+ EA+ +K ++ E R + +K ++K+ +++ DL +L+ A++ AE + + A S ++ AT +L +S E+L K ++ ETED+G GI+ + SQRE +VR+ + + + AR+++++M R +++K A +ILII F+ Sbjct: 4 VSALFNQYENEYCNKSTDISRKITTASTLGAEAKRKKLVEVDVDIKEADTIIKKMDNEARSVAPDRQKQLQNKVKEYKADLASLKEQLQKARSSTSDFEAGRAELGLGMDYASSSAAQRDRMLSATAKLEQSDERLKQGKALLAETEDLGAGILANLHSQRETIVRSRDTLHGADDNITKARKILSSMSKRMLQNKLIMFGIIGTLLAAIILIIYFK 220
BLAST of NO04G03160 vs. NCBI_GenBank
Match: XP_008619157.1 (hypothetical protein SDRG_14781 [Saprolegnia diclina VS20] >EQC27457.1 hypothetical protein SDRG_14781 [Saprolegnia diclina VS20]) HSP 1 Score: 66.2 bits (160), Expect = 1.500e-7 Identity = 58/207 (28.02%), Postives = 94/207 (45.41%), Query Frame = 0 Query: 8 MEEEYYRLSRAINKGIDELGSKYSSVTCSPTPAMAPSTLSRILAEMDMDLAEAEGQVKALEVELRCMNAVDKKIYRDKISQFRNDLCALRRSFGSAKAIAEKRILIQQAPGSGKLKGATERLMRSTEQLNDAKRMVGETEDVGDGIINQMESQREQLVRASEKVQETNWFTRSARQVMNNMHLRAIRHKACLILIIVFQFILIGIVF 215 +EE+Y R IN I +L + +A +T+ + + E G+ L E++ +YRD+I+ F+ DL A ++ T RL RS++QL +KR+V ETE +G +++ + QRE L+ +KV+ET T AR+V+ M R + +K L +IV I I +VF Sbjct: 11 LEEDYIDCKRTINNCIHDLTQTEQK---NAARQLAQATIVEAQRCLKLMAVEVRGRSPTLRKEMQ----AKINVYRDEIAGFQRDLERAMLLXXXXXXXXXXXXXXXDAARYDRIVTNTNRLQRSSDQLEQSKRIVAETEQIGITVMDTLAQQRETLLSTHDKVRETRELTGDARRVLLRMSQRVLTNKITLWFVIVVLVISICLVF 210 The following BLAST results are available for this feature:
BLAST of NO04G03160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G03160 ID=NO04G03160|Name=NO04G03160|organism=Nannochloropsis oceanica|type=gene|length=1386bpback to top protein sequence of NO04G03160.1 >NO04G03160.1-protein ID=NO04G03160.1-protein|Name=NO04G03160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=227bpback to top Synonyms
Publications
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