NO13G00310, NO13G00310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO13G00310 vs. NCBI_GenBank
Match: EWM22871.1 (hypothetical protein Naga_100931g3 [Nannochloropsis gaditana]) HSP 1 Score: 105.1 bits (261), Expect = 3.700e-19 Identity = 102/275 (37.09%), Postives = 137/275 (49.82%), Query Frame = 0 Query: 1 MAYLRVLTYDLDDPLFLRLFETLALTAKQEIELIHVLKRIATPMETLIAQGRAKEAMSKLE---------GXXXXXXXXXXXXXXXXXXXXXXXPSDVGEPGRRIRGDGPTASPSPLPSLPFLLTADPPPFNVSDTLNRTTITGTKTLQERGGH-------PRRVLVTVSTGTQSVGTGDVRFFYSSLLAVPEEEEALKEEVKKAVRIRVLGIEGXXXXXXXXXXXXXXXXXXREGGMSTTINFAPPKSLRKTVLKLTEKMATLCEEGEGGRGEG 260 M++LR+L +DLDDPLFLRLF++L L + QE+ELIHVLKRI TPMETLIA+GR++EA++ LE XXXXXXXXXX + PG + G A + +P LP + P F++ D + T + GH RRVLVT S+G + G RF YSS A E+A EE+++ VR E S ++NF+P +L+KTV K+T GEG +G G Sbjct: 1 MSFLRILDHDLDDPLFLRLFDSLGLNSHQEVELIHVLKRITTPMETLIARGRSREALAFLEKXXXXXXXXXXXXXXXXXXXVEEEARLSPQTCVAAPFPGPGPSVWGTVQEAGQAAVPRLP----SSSPCFHLRDPTVPSPAALTASPALAQGHASRQDAPARRVLVTFSSG-RCQAAGAKRFLYSSHRASRAGEDAFVEEIQEQVR-------------QWRDSGGGRGGSEGEETYSVSVNFSPSGALKKTVWKVT--------AGEGRKGGG 249
BLAST of NO13G00310 vs. NCBI_GenBank
Match: XP_005854655.1 (hypothetical protein NGA_0243500, partial [Nannochloropsis gaditana CCMP526] >EKU21700.1 hypothetical protein NGA_0243500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 102.8 bits (255), Expect = 1.900e-18 Identity = 97/258 (37.60%), Postives = 131/258 (50.78%), Query Frame = 0 Query: 1 MAYLRVLTYDLDDPLFLRLFETLALTAKQEIELIHVLKRIATPMETLIAQGRAKEAMSKLE---------GXXXXXXXXXXXXXXXXXXXXXXXPSDVGEPGRRIRGDGPTASPSPLPSLPFLLTADPPPFNVSDTLNRTTITGTKTLQERGGH-------PRRVLVTVSTGTQSVGTGDVRFFYSSLLAVPEEEEALKEEVKKAVRIRVLGIEGXXXXXXXXXXXXXXXXXXREGGMSTTINFAPPKSLRKTVLKLT 243 M++LR+L +DLDDPLFLRLF++L L + QE+ELIHVLKRI TPMETLIA+GR++EA++ LE XXXXXXXXXX + PG + G A + +P LP + P F++ D + T + GH RRVLVT S+G + G RF YSS A E+A EE+++ VR E S ++NF+P +L+KTV K+T Sbjct: 1 MSFLRILDHDLDDPLFLRLFDSLGLNSHQEVELIHVLKRITTPMETLIARGRSREALAFLEKXXXXXXXXXXXXXXXXXXXVEEEARLSPQTCVAAPFPGPGPSVWGTVQEAGQAAVPRLP----SSSPCFHLRDPTVPSPAALTASPALAQGHASRQDAPARRVLVTFSSG-RCQAAGAKRFLYSSHRASRAGEDAFVEEIQEQVR-------------QWRDSGGGRGGSEGEETYSVSVNFSPSGALKKTVWKVT 240 The following BLAST results are available for this feature:
BLAST of NO13G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 2
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00310 ID=NO13G00310|Name=NO13G00310|organism=Nannochloropsis oceanica|type=gene|length=1846bpback to top protein sequence of NO13G00310.1 >NO13G00310.1-protein ID=NO13G00310.1-protein|Name=NO13G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=301bpback to top Synonyms
Publications
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