NO11G01050, NO11G01050 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO11G01050 vs. NCBI_GenBank
Match: EWM25146.1 (hypothetical protein Naga_100016g34 [Nannochloropsis gaditana]) HSP 1 Score: 435.6 bits (1119), Expect = 2.200e-118 Identity = 243/544 (44.67%), Postives = 319/544 (58.64%), Query Frame = 0 Query: 1 MEVICDLTEDSPTPRIPPLNREAAASSAAIKLDNEEGKDAHDVLALNNEEDDENELFKNPFTEAGLPDRPDELPSSCEPLFARGDAASASRRRMLDAYDEHKDECSYDDGLQG------STGNKQPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWSKLVGDSQRGLYKNDEIVMVVDKRLRDTGLGKAVADTMRTGEFKAKQIFLAGPSCRCEDDEALEGARHHPGMVRWARMPRPLWDDKDVCPRHSGPHVEQLGFVVVVWEARDFCDQLGMDTRGDLRVDGPNEGAAGGVGKSRTTYQTLERVIEDIRLSPGMPAGARLVVLLQGVQAEIALRWRRKGQGSGGTGGACVTSDDYADALVWLLLSKGIEYKETKDPVETAMYLREATRALAERPFRDRATDLISATKGKAVIS-----SXXXXXXXXXXXXXXXXXXXXXXXWARQLEVIPGMSDSKSLYVVKNHHRTLRSLLDVYEDPRYTQEQKINWLADKMETCPVGKAPRHFKSLSTKIYQCLMVDDPNFLIND 534 M CDLTED +P +K +E + L +++DDE+ L +PF GLP P ++ +S L D S R ++ + E +D QG R +KL+ DSQRGLYK++EIVMVV+KRLR T LG+ +AD R+ EFK+KQIF+AGP C E+DE E A +HPG++ WARMP+PLWD ++ CPRHSGP VEQLG V+VVW+A +FCD+L +D RG R + VG +Y TL+ I+ IRLSPG+PA +R+V++LQGV+AEIA RWR++G G GA +T DDYADALVW+LL++GIEYKETKD ET YLR+ TRALAE PFRD AT+L SA KGKA+++ + WARQLEV+PGMSD+K+L++V NHH TLRSLLDVY+DP+Y++E+K+NWLADKME+ +AP+ FKSLS KIYQCL +P LIN+ Sbjct: 1 MADFCDLTEDLASP---------------VKAHGQE------TVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTS--SLTQTSDFIVRSCRMASREEEDERGERG-NDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRG-GGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSLSMKIYQCLTAHEPQSLINE 519
BLAST of NO11G01050 vs. NCBI_GenBank
Match: EWM25147.1 (hypothetical protein Naga_100016g34 [Nannochloropsis gaditana]) HSP 1 Score: 401.7 bits (1031), Expect = 3.500e-108 Identity = 226/512 (44.14%), Postives = 298/512 (58.20%), Query Frame = 0 Query: 1 MEVICDLTEDSPTPRIPPLNREAAASSAAIKLDNEEGKDAHDVLALNNEEDDENELFKNPFTEAGLPDRPDELPSSCEPLFARGDAASASRRRMLDAYDEHKDECSYDDGLQG------STGNKQPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDWSKLVGDSQRGLYKNDEIVMVVDKRLRDTGLGKAVADTMRTGEFKAKQIFLAGPSCRCEDDEALEGARHHPGMVRWARMPRPLWDDKDVCPRHSGPHVEQLGFVVVVWEARDFCDQLGMDTRGDLRVDGPNEGAAGGVGKSRTTYQTLERVIEDIRLSPGMPAGARLVVLLQGVQAEIALRWRRKGQGSGGTGGACVTSDDYADALVWLLLSKGIEYKETKDPVETAMYLREATRALAERPFRDRATDLISATKGKAVIS-----SXXXXXXXXXXXXXXXXXXXXXXXWARQLEVIPGMSDSKSLYVVKNHHRTLRSLLDVYEDPRYTQEQKINWLADKMET 502 M CDLTED +P +K +E + L +++DDE+ L +PF GLP P ++ +S L D S R ++ + E +D QG R +KL+ DSQRGLYK++EIVMVV+KRLR T LG+ +AD R+ EFK+KQIF+AGP C E+DE E A +HPG++ WARMP+PLWD ++ CPRHSGP VEQLG V+VVW+A +FCD+L +D RG R + VG +Y TL+ I+ IRLSPG+PA +R+V++LQGV+AEIA RWR++G G GA +T DDYADALVW+LL++GIEYKETKD ET YLR+ TRALAE PFRD AT+L SA KGKA+++ + WARQLEV+PGMSD+K+L++V NHH TLRSLLDVY+DP+Y++E+K+NWLADKME+ Sbjct: 1 MADFCDLTEDLASP---------------VKAHGQE------TVILKDDQDDEDNLLNDPFEAVGLPAPPIDVSTS--SLTQTSDFIVRSCRMASREEEDERGERG-NDKFQGGAEHTRGVSTSHERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLICDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPGCAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVIVVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSIRLSPGIPADSRVVLVLQGVKAEIASRWRQRG-GGAVEQGARLTMDDYADALVWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGKAIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKALHIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMES 487
BLAST of NO11G01050 vs. NCBI_GenBank
Match: CBJ28673.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 91.3 bits (225), Expect = 1.000e-14 Identity = 83/366 (22.68%), Postives = 145/366 (39.62%), Query Frame = 0 Query: 173 RGLYKNDEIVMVVDKRLRDTGLGKAVADTMRTGEFKAKQIFLAGPSCRCEDDEALEGARHHPGMVRWARMPRPLWDDKDVCPRHSGPHVEQLGFVVVVWEARDFCDQLGMDTRGDLRVDGPNEGAAGGVGKSRTTYQTLERVIEDIRLSPGMPAGARLVVLLQGVQAEIALRWRRKGQGSGGTG------GACVTSDDYADALVWLLLSKGIEYKETKDPVETAMYLREATRALAERPFRDRATDLISATKGKAVISSXXXXXXXXXXXXXXXXXXXXXXXWARQLEVIPGMSDSKSLYVVKNHHRTLRSLLDVYEDPRYTQEQKINWLADKMETCPVGKAPRHFKSLSTKIYQCLMVDDPNFLIN 533 RG ++++E+ V+++ D+ A A + K+ F+ P G G V W R D SGP V+ L +VVV D+LG + ++ L + ++ IR S +RLV++L+G +A I RW S +G G C D++ DA WLL+ K +E + TK+ ET YL + T++L+ P++D T+L + K W R LE + +S +K++ + H+ R L+ DP + + L KM G + + + ++++ +D +F+I+ Sbjct: 454 RGNFRDEEVACVMERHFFDSA-RNARARAGAAEQQGHKEKFMVAP-----------GDCGAAGAVWWTRRAH-----LDGGAAVSGPGVQTLDILVVVVPPETLLDRLGRPGAXXXXXXXXXXXXXXDL------FRGLGQFVDGIRSSAA--GFSRLVLVLEGAKAAIDKRWAASAHSSSSSGNGKGPAGRCARDDEFEDAQCWLLIHKEVETRLTKNSEETGQYLWDLTKSLSSMPYKDDVTELHCVARSKT---------EARGSERFPEKEKELMDTWVRMLEQVQHVSGNKAVEIAA-HYPLPRDLVAALSDPSVPEGDRAGLLQRKM-----GSSSEQ-RKCARRVFELFTQEDGDFVID 778 The following BLAST results are available for this feature:
BLAST of NO11G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO11G01050 ID=NO11G01050|Name=NO11G01050|organism=Nannochloropsis oceanica|type=gene|length=4098bpback to top protein sequence of NO11G01050.2 >NO11G01050.2-protein ID=NO11G01050.2-protein|Name=NO11G01050.2|organism=Nannochloropsis oceanica|type=polypeptide|length=528bpback to top protein sequence of NO11G01050.1 >NO11G01050.1-protein ID=NO11G01050.1-protein|Name=NO11G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=551bpback to top Synonyms
Publications
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