Naga_100016g34, gene5386 (gene) Nannochloropsis gaditana

Overview
NameNaga_100016g34
Unique Namegene5386
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002466.1:316322..318737 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100016g34
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002466.1supercontigCM002466.1:316322..318737 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0006259DNA metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL019ngnoL019Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL018ngnoL018Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO11G01050NO11G01050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna5574rna5574-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna5573rna5573-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna5574rna5574Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna5573rna5573Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna5574

>rna5574-protein ID=rna5574-protein|Name=rna5574|organism=Nannochloropsis gaditana|type=polypeptide|length=529bp
MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPI
DVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTS
HERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLI
CDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPG
CAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVI
VVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSI
RLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADAL
VWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGK
AIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKAL
HIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRAPKQFKSL
SMKIYQCLTAHEPQSLINECGDNNKGKRK
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protein sequence of rna5573

>rna5573-protein ID=rna5573-protein|Name=rna5573|organism=Nannochloropsis gaditana|type=polypeptide|length=499bp
MADFCDLTEDLASPVKAHGQETVILKDDQDDEDNLLNDPFEAVGLPAPPI
DVSTSSLTQTSDFIVRSCRMASREEEDERGERGNDKFQGGAEHTRGVSTS
HERRILSTSLNGRSDEHISRVRKERRAAVKAEREAKQVEERIRKARAKLI
CDSQRGLYKHEEIVMVVEKRLRHTPLGEVIADIRRSEEFKSKQIFVAGPG
CAEEEDEMPEAACYHPGLIMWARMPKPLWDSEEECPRHSGPFVEQLGLVI
VVWDAGEFCDKLAVDARGICRRRTVGDSRIETVGTVVGSYDTLQHAIQSI
RLSPGIPADSRVVLVLQGVKAEIASRWRQRGGGAVEQGARLTMDDYADAL
VWMLLAEGIEYKETKDAAETGTYLRDVTRALAEVPFRDTATELSSAAKGK
AIVNTGLGGNRDEALVFASSTQGLSQADKVATAWARQLEVVPGMSDTKAL
HIVNNHHGTLRSLLDVYQDPKYSEEEKMNWLADKMESVSGTRVSALRCL
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Synonyms
Publications