NO01G02160, NO01G02160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO01G02160 vs. NCBI_GenBank
Match: EWM29187.1 (dna replication complex gins protein psf1 [Nannochloropsis gaditana]) HSP 1 Score: 355.5 bits (911), Expect = 1.100e-94 Identity = 170/199 (85.43%), Postives = 188/199 (94.47%), Query Frame = 0 Query: 1 MNFGQKGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQIRPALAQEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHV-PSASSAQS 199 M+FG KGRELLQ+LKRSDWLPLY+EDAVSRCL ECQGHMAQIRPALAQEMTEVPPEYLVAL+VHLQ+ILRNKRCLLAYMQ+RLDKVR+LRW+TGGA+IPT LQRKLSAKE+EFFASYDK+LS+YMG+YPLLDLTGS LPPKE+CIEVRVLADCGE+MTDQGPVNL++GTNHFLRRADVEGLIRQG L H+ PSA S Sbjct: 1 MDFGLKGRELLQDLKRSDWLPLYNEDAVSRCLQECQGHMAQIRPALAQEMTEVPPEYLVALTVHLQHILRNKRCLLAYMQYRLDKVRDLRWETGGAIIPTRLQRKLSAKESEFFASYDKILSDYMGNYPLLDLTGSTLPPKEICIEVRVLADCGEIMTDQGPVNLERGTNHFLRRADVEGLIRQGFLLHIAPSARQGSS 199
BLAST of NO01G02160 vs. NCBI_GenBank
Match: CBJ29507.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 196.8 bits (499), Expect = 6.300e-47 Identity = 100/196 (51.02%), Postives = 134/196 (68.37%), Query Frame = 0 Query: 1 MNFGQKGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQIRPALAQEMT-EVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHVPSASS 196 MNFG K ++LL ELKRSDWLP Y+ED V L E Q ++ L T ++P V+L VH Q +LRNKRCLL Y++ R D++ +LRW+T G V+P LQ+ LSA+E E F +YD++L+ + LDLT + PPKE+ +EVRVL+DCGE+MTD G V L +GT H LRR+DVE L+RQGLLQ + + S+ Sbjct: 1 MNFGAKSKDLLVELKRSDWLPPYNEDGVRGVLAEIQALYDELTDTLGGRTTSDIPDPVKVSLVVHHQALLRNKRCLLTYLKWRADRITQLRWET-GPVVPQELQQSLSAREMELFNTYDRILTNFTQGLN-LDLTADLQPPKELHVEVRVLSDCGEIMTDHGSVKLDRGTTHLLRRSDVEHLVRQGLLQELENEST 194
BLAST of NO01G02160 vs. NCBI_GenBank
Match: OWZ09451.1 (DNA replication complex GINS protein PSF1 [Phytophthora megakarya]) HSP 1 Score: 182.2 bits (461), Expect = 1.600e-42 Identity = 94/192 (48.96%), Postives = 129/192 (67.19%), Query Frame = 0 Query: 1 MNFGQKGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQI--RPALAQEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHV 191 M KG+ELL+EL+RSDWLP Y+ED V R + E +I + ++ ++ P L V+ Q +LRNKRCL+AY+ HR++K++ LRW+T G +IP L + L E +FF YD+LL++YM + LDLT I PPK++ +EVRVL DCGEVMT+ G VNL+ + HFLRR DVE LIRQGLL+ + Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRRVVEESGLLHEEISKKMSMYADLVNEPASVHCGLVVNHQCLLRNKRCLIAYVHHRMEKIKALRWET-GTIIPASLAQNLCQGEVQFFNQYDQLLTDYMADFE-LDLTADIKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 190
BLAST of NO01G02160 vs. NCBI_GenBank
Match: XP_009519892.1 (hypothetical protein PHYSODRAFT_554712 [Phytophthora sojae] >EGZ24604.1 hypothetical protein PHYSODRAFT_554712 [Phytophthora sojae]) HSP 1 Score: 181.8 bits (460), Expect = 2.100e-42 Identity = 92/190 (48.42%), Postives = 127/190 (66.84%), Query Frame = 0 Query: 1 MNFGQKGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQIRPALAQEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHV 191 M KG+ELL+EL+RSDWLP Y+ED V + + E ++ L +P AL V Q +LRNKRCLLAY+ HR++K++ LRW+T G +IP L + L +E +FF YD++L++YM + LDL+ + PPK++ +EVRVL DCGEVMT+ G VNL+ + HFLRR DVE LIRQGLL+ + Sbjct: 1 MALNAKGKELLRELQRSDWLPPYNEDLVRQVVEESGLLHEELNRKLETFKEGMPKSVECALVVSHQGLLRNKRCLLAYLHHRMEKIKALRWET-GTIIPGPLAQNLCQREVQFFNQYDQMLTDYMADFE-LDLSADLKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 188
BLAST of NO01G02160 vs. NCBI_GenBank
Match: XP_008909734.1 (hypothetical protein PPTG_14572 [Phytophthora parasitica INRA-310] >ETI40428.1 hypothetical protein F443_14168 [Phytophthora parasitica P1569] >ETK80529.1 hypothetical protein L915_13814 [Phytophthora parasitica] >ETL33953.1 hypothetical protein L916_13710 [Phytophthora parasitica] >ETL87227.1 hypothetical protein L917_13516 [Phytophthora parasitica] >ETM40414.1 hypothetical protein L914_13624 [Phytophthora parasitica] >ETN04797.1 hypothetical protein PPTG_14572 [Phytophthora parasitica INRA-310] >ETO69129.1 hypothetical protein F444_14197 [Phytophthora parasitica P1976] >ETP00593.1 hypothetical protein F441_21990 [Phytophthora parasitica CJ01A1] >ETP38344.1 hypothetical protein F442_14012 [Phytophthora parasitica P10297]) HSP 1 Score: 177.9 bits (450), Expect = 3.000e-41 Identity = 93/192 (48.44%), Postives = 128/192 (66.67%), Query Frame = 0 Query: 1 MNFGQKGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQIRPALAQEMTEVPPEYLVA--LSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHV 191 M K RELL+EL+RSDWLP Y+ED V + + E +I +A + VA L V+ Q +LRNKRCL+AY+ HR++K++ LRW+T G +IP L + L +E +FF YD+LL++YM + LDL+ + PPK++ +EVRVL DCGEVMT+ G VNL+ + HFLRR DVE LIRQGLL+ + Sbjct: 1 MALNAKARELLRELQRSDWLPPYNEDLVRQVVEESGVLEEEIARKMATFDDNLTENTFVACGLVVNHQCLLRNKRCLIAYVHHRMEKIKALRWET-GTIIPAQLAQNLCQREVQFFNQYDQLLTDYMAEFE-LDLSADMKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 190
BLAST of NO01G02160 vs. NCBI_GenBank
Match: GBG32447.1 (DNA replication complex GINS protein PSF1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 176.8 bits (447), Expect = 6.800e-41 Identity = 96/194 (49.48%), Postives = 125/194 (64.43%), Query Frame = 0 Query: 3 FGQKGRELLQELKRSDWLPLYS----EDAVSRCLLECQGHMAQIRPALAQEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHVPS 193 +G KGRELL ELKRS+WLP Y+ +D V + L E ++R +A+ P Y L V+ + LRNKRCLLAY+++R D + LRWD G A IP L+RKL A+E ++F++YD +LS+YM LDL + PPK + +EVRVL DCGE+ T GPV L K T H LRR+DVE LIRQG L+ V S Sbjct: 7 YGAKGRELLLELKRSEWLPAYNGKRQDDGVRQVLGEIDALYKRMRSRMAESRDMREPFYGCPLMVYHASTLRNKRCLLAYLKYRADLIGNLRWDAGSA-IPEDLRRKLCAEEAQYFSAYDNILSDYMREVD-LDLAADMEPPKNLYVEVRVLRDCGEIDTVSGPVVLAKDTTHNLRRSDVEHLIRQGALEQVTS 198
BLAST of NO01G02160 vs. NCBI_GenBank
Match: XP_008617638.1 (hypothetical protein SDRG_13334 [Saprolegnia diclina VS20] >EQC28999.1 hypothetical protein SDRG_13334 [Saprolegnia diclina VS20]) HSP 1 Score: 175.3 bits (443), Expect = 2.000e-40 Identity = 90/185 (48.65%), Postives = 124/185 (67.03%), Query Frame = 0 Query: 6 KGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQIRPALA---QEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLL 188 K +ELLQEL RS+WLP Y+ED++ + E QI + E++E P E + H Q + RNKRC LAY+ HR++K++ELRW T G+V+P HL L A+E +FF YD+LL++YM + +DL + PPK++ IEVRVL DCGE+ T+ G V+L+ + HFLRR DVEGLIRQG+L Sbjct: 6 KAKELLQELGRSEWLPPYNEDSIRQISEEVHALNKQIVKTIQTFDNELSEYPAEQCGVVINH-QCLTRNKRCTLAYVNHRVNKIKELRWQT-GSVVPDHLAPALHAREVQFFHGYDQLLTDYMSSFG-IDLAADMQPPKDLFIEVRVLKDCGEIYTENGAVHLRANSTHFLRRMDVEGLIRQGML 187
BLAST of NO01G02160 vs. NCBI_GenBank
Match: XP_012207874.1 (hypothetical protein SPRG_12434 [Saprolegnia parasitica CBS 223.65] >KDO21427.1 hypothetical protein SPRG_12434 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 174.5 bits (441), Expect = 3.400e-40 Identity = 90/185 (48.65%), Postives = 123/185 (66.49%), Query Frame = 0 Query: 6 KGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQIRPALA---QEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLL 188 K +ELLQEL RS+WLP Y+ED + + E QI + E++E P E + H Q + RNKRC LAY+ HR++K++ELRW T G+V+P HL L A+E +FF YD+LL++YM + +DL + PPK++ IEVRVL DCGE+ T+ G V+L+ + HFLRR DVEGLIRQG+L Sbjct: 6 KAKELLQELGRSEWLPPYNEDNIRQISEEVHALNKQIVKTIQTFDSELSEYPAEQCGVVINH-QCLTRNKRCTLAYINHRVNKIKELRWQT-GSVVPEHLAPALHAREVQFFHGYDQLLTDYMSSFG-IDLAADMQPPKDLFIEVRVLKDCGEIYTENGAVHLRANSTHFLRRTDVEGLIRQGML 187
BLAST of NO01G02160 vs. NCBI_GenBank
Match: OQR93597.1 (DNA replication complex GINS protein PSF1 [Thraustotheca clavata]) HSP 1 Score: 171.8 bits (434), Expect = 2.200e-39 Identity = 88/188 (46.81%), Postives = 123/188 (65.43%), Query Frame = 0 Query: 6 KGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQI---RPALAQEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHV 191 K +ELL EL RS+WLP Y+ED+V + E G Q+ A ++ E P E L H Q ++RNKR +LAY+ HR++K++ELRW T G+V+P HL L +E +FF YD+LL+ YM + +DL + PPK++ IEVRVL DCGE+ T+ G ++L+ + HFLRR DVEGLIRQG+L + Sbjct: 6 KAKELLLELTRSEWLPPYNEDSVRQISQEVHGFHKQVLKKLQAYEDDIAEHPAEQCNVLVSH-QCLMRNKRTILAYLNHRVNKIKELRWQT-GSVVPEHLAPALCTREMQFFHGYDQLLAGYMSGFG-IDLAADLQPPKDLFIEVRVLKDCGEIYTENGAIHLRANSTHFLRRTDVEGLIRQGMLVQI 190
BLAST of NO01G02160 vs. NCBI_GenBank
Match: XP_002908705.1 (DNA replication complex GINS protein PSF1 [Phytophthora infestans T30-4] >EEY57519.1 DNA replication complex GINS protein PSF1 [Phytophthora infestans T30-4]) HSP 1 Score: 169.5 bits (428), Expect = 1.100e-38 Identity = 88/190 (46.32%), Postives = 124/190 (65.26%), Query Frame = 0 Query: 1 MNFGQKGRELLQELKRSDWLPLYSEDAVSRCLLECQGHMAQIRPALAQEMTEVPPEYLVALSVHLQNILRNKRCLLAYMQHRLDKVRELRWDTGGAVIPTHLQRKLSAKETEFFASYDKLLSEYMGHYPLLDLTGSILPPKEMCIEVRVLADCGEVMTDQGPVNLKKGTNHFLRRADVEGLIRQGLLQHV 191 M K +EL++EL+RSDWLP Y+ED V R ++E G+ L V+ Q +LRNKRCL+AY+ HR++K++ LRW+T G ++P L + L +E +FF YD+LL++YM + LDL+ + PPK++ +EVRVL DCGEVMT+ G VNL+ + HFLRR DVE LIRQGLL+ + Sbjct: 1 MALNMKAKELVRELQRSDWLPPYNEDLV-RQVVEESGN----------------TYVACGLVVNHQCLLRNKRCLIAYLHHRIEKIKALRWET-GTIMPAQLAQNLCQREVQFFNQYDQLLTDYMADFE-LDLSADMKPPKDLYVEVRVLRDCGEVMTESGLVNLEAHSQHFLRRVDVEQLIRQGLLEQI 171 The following BLAST results are available for this feature:
BLAST of NO01G02160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO01G02160 ID=NO01G02160|Name=NO01G02160|organism=Nannochloropsis oceanica|type=gene|length=2319bpback to top protein sequence of NO01G02160.1 >NO01G02160.1-protein ID=NO01G02160.1-protein|Name=NO01G02160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=201bpback to top Synonyms
Publications
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