NO23G01810, NO23G01810 (gene) Nannochloropsis oceanica

Overview
NameNO23G01810
Unique NameNO23G01810
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1596
Alignment locationchr23:651667..653262 +

Link to JBrowse

Properties
Property NameValue
DescriptionDiaminopimelate decarboxylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:651667..653262 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006596polyamine biosynthetic process
GO:0006596polyamine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR029066PLP-binding_barrel
IPR009006Ala_racemase/Decarboxylase_C
IPR022643De-COase2_C
IPR022644De-COase2_N
IPR002433Orn_de-COase
IPR000183Orn/DAP/Arg_de-COase
Homology
BLAST of NO23G01810 vs. NCBI_GenBank
Match: EWM27772.1 (diaminopimelate decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 561.2 bits (1445), Expect = 3.400e-156
Identity = 305/537 (56.80%), Postives = 365/537 (67.97%), Query Frame = 0
Query:    4 AAYDSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFP---PPSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEES--LSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVK---------EGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWGPR 527
            AAY S +V  VL++L+ QG+LQPS+AR GEDV++AYDLDAL  GF SL +AFP HFLHCYA+KAAPMGFI++ AI+AGLG+EAASILEVE+AL HGC P  IVFDSPAKT++ELD+ALS GIHINANT EE+DRIASILS  + S  P   PPS+GLRINPLVG GTI  LSVATATSKFGVPL    SS S        +  S S+K +++  F KYPWLTGLH+HVGSQG+ M QLA GV+VL  L  +V+++  +   G   E   R+ T+D+GGGL  +Y S +  P   +L   L+ AAPSLF+PPP                   P +RVVTE+GR LT +TAWLASRVEY F N   DG        G  G   LRTAILHAGAD+LLRECY+PG+F HRF+++ + G    V+                      P   NLAGPLCFAGDVI  G++LP + SGDW+VVHDVGGYTLALFSRYCSR+APAVVGY  G E G E G  + V VLQ RE  +SVL FWG R
Sbjct:    3 AAYKSSKVGAVLRTLQKQGVLQPSEARKGEDVILAYDLDALEAGFRSLTEAFPAHFLHCYAMKAAPMGFIVEKAIQAGLGIEAASILEVENALLHGCQPANIVFDSPAKTFRELDYALSLGIHINANTFEEIDRIASILSEPTPSHAPPRYPPSVGLRINPLVGEGTIAALSVATATSKFGVPL----SSCSYDPSTPIENIPSSSSKDRILGAFRKYPWLTGLHVHVGSQGISMGQLAHGVRVLSLLAIDVDKAMGMEDGGGPGESGGRVRTMDLGGGLGVDYASPRNSPNFTELAATLKRAAPSLFLPPPAQEGGKGSVEPQSGCSAGHPRIRVVTEFGRGLTVRTAWLASRVEYVFAN--ADG--------GLEGAETLRTAILHAGADILLRECYLPGRFPHRFSLYSEAGQGVAVEGEXXXXXXXXXXXXXXXXXXXRPGRFNLAGPLCFAGDVIAKGVRLPLLTSGDWVVVHDVGGYTLALFSRYCSRSAPAVVGYWKGGEEGGERGEEIQVRVLQARETEKSVLGFWGGR 525          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: GAX99392.1 (Hypothetical protein PINS_007225 [Pythium insidiosum])

HSP 1 Score: 344.7 bits (883), Expect = 5.000e-91
Identity = 206/541 (38.08%), Postives = 294/541 (54.34%), Query Frame = 0
Query:    5 AYDSRQVQIVLQSLRAQGILQPSKAR--------AGEDVVIA--YDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTG--LRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            A    Q+  V++ +    +L    AR        A E V +A  YDLDA+   F +L+ +FP HF H +A+K+ P+ F ++ AI   +GLE ASI+EV+ AL  GCPP KIVFDSP KT +++ FA++ G+ +NA+  +EL  I         S FP          P IGLR+NPL+GAGT + LSV+T  SKFGVPLT                    +N+ +++ +F + PW++GLH HVGSQG  +D LA+G  ++  L  E++ +         G  R+  ++IGGGL +NY S+   PT A+ V+ LR+ AP LF     +                      +TE+GRS++AKT W+ S VEY     E DG     E  G  GT     +TAI+HAG+D+ LR CY P  F HR +V+D               G      P + N+AGPLCF GD+I   ++LP +E GD++V+HD G  T++LFSR+CSR AP V GYR+  +        +T+E+L+  E+ E V+ FWG
Sbjct:  784 AVKKTQIARVVRKMCVDAVLGSDDARRVQRFSPLADEPVKLALVYDLDAIDMAFQALLTSFPSHFDHRFAMKSCPLTFFVKRAIENDVGLECASIVEVQHALRLGCPPHKIVFDSPCKTRRDIAFAINAGVEVNADNFDELQIIREHAEELLQSNFPECTPRFAGDLPRIGLRVNPLLGAGTNECLSVSTVHSKFGVPLT-------------------KANRRRIVDFFRENPWMSGLHCHVGSQGCSLDMLAKGAAIICELANEIDAA--------AGVSRVKVVNIGGGLPSNYDSDDVTPTFAEYVDALRKGAPQLFERSGRT---------------------XLTEFGRSVSAKTGWVISEVEYV-KRHEVDG-----EILGADGTPDPLQQTAIIHAGSDLFLRTCYRPELFPHRLSVYD-------------ASGMSSTAAPSIQNVAGPLCFGGDMIARRMELPTIERGDFVVIHDAGSNTMSLFSRHCSRPAPPVYGYRVMDD-------ELTMELLKPAESAEDVMRFWG 1250          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: ETI49711.1 (hypothetical protein F443_06510 [Phytophthora parasitica P1569] >ETK89595.1 hypothetical protein L915_06376 [Phytophthora parasitica] >ETL42998.1 hypothetical protein L916_06322 [Phytophthora parasitica] >ETL96173.1 hypothetical protein L917_06189 [Phytophthora parasitica] >ETP19483.1 hypothetical protein F441_06513 [Phytophthora parasitica CJ01A1] >KUF79986.1 Diaminopimelate decarboxylase [Phytophthora nicotianae])

HSP 1 Score: 340.5 bits (872), Expect = 9.400e-90
Identity = 193/527 (36.62%), Postives = 287/527 (54.46%), Query Frame = 0
Query:    7 DSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            D++  ++V   +  + ++   +      + + YDLDA+   F +L+ +FP+HF H +A+K+ P+ F ++ AI   +GLE ASI+EV+ AL  GCPP +IVFDSP KT ++L FA++ G+ +NA+  +ELD I     A   S+FP          P IGLRINPL+GAGT   LSV+T  SKFGVPLT +                   N+ ++I++F   PW+TGLH HVGSQG  ++ L+QG  VL  L  E++ +         G  RI  L+IGGGL+ N+ +    PT A+ VEVLR  AP LF     +                     ++TE+G S+++KT W+ S VEY   +   DG +              +TAI+HAG+D+ LR CY P  F  R +V++               G +      + N+AGPLCF GD++   ++LP +  GD++VVHD G  T+++FSR+CSR APAV GYR   +        +++++L+  E  E V+ FWG
Sbjct:  778 DAQVARVVQHMVEERVLVNEDQPEDETKLAVVYDLDAIDMAFQALLTSFPVHFEHRFAMKSCPLSFFIKRAIENDVGLECASIVEVKHALRLGCPPHRIVFDSPCKTRRDLQFAINAGVEVNADNFDELDIIREHAEAIFQSSFPECTPRYAGNLPRIGLRINPLLGAGTNSCLSVSTVQSKFGVPLTPE-------------------NRARIIAFFCANPWMTGLHAHVGSQGCSLEMLSQGAVVLSELANEIDAA--------AGTSRIKVLNIGGGLSTNFENEDVSPTFAEYVEVLRREAPQLFERTGRT---------------------ILTEFGSSVSSKTGWVVSEVEYVKTHPRVDGDD------------LTQTAIIHAGSDLFLRACYRPELFARRMSVYN-------------SAGLISTAPMSVQNVAGPLCFGGDMVGRRVELPTISRGDFVVVHDTGANTMSMFSRHCSRPAPAVFGYRASED-------EISLQLLKPAETPEQVMSFWG 1224          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: XP_009519084.1 (hypothetical protein PHYSODRAFT_478468 [Phytophthora sojae] >EGZ23796.1 hypothetical protein PHYSODRAFT_478468 [Phytophthora sojae])

HSP 1 Score: 339.0 bits (868), Expect = 2.700e-89
Identity = 195/527 (37.00%), Postives = 284/527 (53.89%), Query Frame = 0
Query:    7 DSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            D++  ++V   + ++ +    +      + + YDLD++   F +L+ +FP+HF H +A+K+ P+ F ++ AI   +GLE ASI+EV+ AL  GCPP +IVFDSP KT ++L FA++ G+ +NA+  +EL+ I     A   S+FP          P IGLRINPL+GAGT   LSV+T  SKFGVPLT +                   N+ K+I +F   PW+TGLH HVGSQG  ++ L+QG  VL  L  E++ +         G  RI  L+IGGGL+ N+      PT A+ VEVLR  AP LF     +                     ++TE+G S+++KT W+ S VEY   +   D            G T  +TAI+HAG+D+ LR CY P  F  R +V++               G V      + N+AGPLCF GD++   ++LP +  GD++VVHD G  T+++FSR+CSR APAV GYR   +        + +E+L+  E  E V+ FWG
Sbjct:  749 DAQVARVVQHMVESRVLANEDQPEEENKLAVVYDLDSIDMAFQALLTSFPVHFEHRFAMKSCPLAFFVKRAIENEVGLECASIVEVKHALRLGCPPHRIVFDSPCKTRRDLQFAINAGVEVNADNFDELNIIREHAEAIFQSSFPECTPRYAGNLPRIGLRINPLLGAGTNTCLSVSTVQSKFGVPLTPE-------------------NRTKIIEFFCANPWMTGLHAHVGSQGCSLEMLSQGAVVLSELANEIDAA--------AGASRIKVLNIGGGLSTNFDGEDVSPTFAEYVEVLRREAPQLFERTGRT---------------------ILTEFGSSVSSKTGWVVSEVEYVKTHPRVD------------GDTLEQTAIIHAGSDLFLRACYRPELFARRISVYN-------------SAGLVSTAPLAVQNVAGPLCFGGDMVGRRLELPTISRGDFVVVHDTGANTMSMFSRHCSRPAPAVYGYRTNED-------DIALELLKPAEPPEEVMSFWG 1195          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: XP_008892032.1 (hypothetical protein PPTG_02609 [Phytophthora parasitica INRA-310] >ETN22808.1 hypothetical protein PPTG_02609 [Phytophthora parasitica INRA-310] >KUF98439.1 hypothetical protein AM588_10011500 [Phytophthora nicotianae])

HSP 1 Score: 339.0 bits (868), Expect = 2.700e-89
Identity = 192/527 (36.43%), Postives = 286/527 (54.27%), Query Frame = 0
Query:    7 DSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            D++  ++V   +  + ++   +      + + YDLDA+   F +L+ +FP+HF H +A+K+ P+ F ++ AI   +GLE ASI+EV+ AL  GCPP +IVFDSP KT ++L FA++ G+ +NA+  +ELD I     A   S+FP          P IGLRINPL+GAGT   LSV+T  SKFGVPLT +                   N+ ++I++F   PW+TGLH HVGSQG  ++ L+QG  VL  L  E++ +         G  RI  L+IGGGL+ N+ +    PT A+ VEVLR  AP LF     +                     ++TE+G S+++KT W+ S VEY   +   DG +              +TAI+HAG+D+ LR CY P  F  R +V++               G +      + N+ GPLCF GD++   ++LP +  GD++VVHD G  T+++FSR+CSR APAV GYR   +        +++++L+  E  E V+ FWG
Sbjct:  778 DAQVARVVQHMVEERVLVNEDQPEDETKLAVVYDLDAIDMAFQALLTSFPVHFEHRFAMKSCPLSFFIKRAIENDVGLECASIVEVKHALRLGCPPHRIVFDSPCKTRRDLQFAINAGVEVNADNFDELDIIREHAEAIFQSSFPECTPRYAGNLPRIGLRINPLLGAGTNSCLSVSTVQSKFGVPLTPE-------------------NRARIIAFFCANPWMTGLHAHVGSQGCSLEMLSQGAVVLSELANEIDAA--------AGTSRIKVLNIGGGLSTNFENEDVSPTFAEYVEVLRREAPQLFERTGRT---------------------ILTEFGSSVSSKTGWVVSEVEYVKTHPRVDGDD------------LTQTAIIHAGSDLFLRACYRPELFARRMSVYN-------------SAGLISTAPMSVQNVVGPLCFGGDMVGRRVELPTISRGDFVVVHDTGANTMSMFSRHCSRPAPAVFGYRASED-------EISLQLLKPAETPEQVMSFWG 1224          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: ETM49343.1 (hypothetical protein L914_06305 [Phytophthora parasitica] >ETO78425.1 hypothetical protein F444_06576 [Phytophthora parasitica P1976])

HSP 1 Score: 338.6 bits (867), Expect = 3.600e-89
Identity = 192/527 (36.43%), Postives = 286/527 (54.27%), Query Frame = 0
Query:    7 DSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            D++  ++V   +  + ++   +      + + YDLDA+   F +L+ +FP+HF H +A+K+ P+ F ++ AI   +GLE ASI+EV+ AL  GCPP +IVFDSP KT ++L FA++ G+ +NA+  +ELD I     A   S+FP          P IGLRINPL+GAGT   LSV+T  SKFGVPLT +                   N+ ++I++F   PW+TGLH HVGSQG  ++ L+QG  VL  L  E++ +         G  RI   +IGGGL+ N+ +    PT A+ VEVLR  AP LF     +                     ++TE+G S+++KT W+ S VEY   +   DG +              +TAI+HAG+D+ LR CY P  F  R +V++               G +      + N+AGPLCF GD++   ++LP +  GD++VVHD G  T+++FSR+CSR APAV GYR   +        +++++L+  E  E V+ FWG
Sbjct:  778 DAQVARVVQHMVEERVLVNEDQPEDETKLAVVYDLDAIDMAFQALLTSFPVHFEHRFAMKSCPLSFFIKRAIENDVGLECASIVEVKHALRLGCPPHRIVFDSPCKTRRDLQFAINAGVEVNADNFDELDIIREHAEAIFQSSFPECTPRYAGNLPRIGLRINPLLGAGTNSCLSVSTVQSKFGVPLTPE-------------------NRARIIAFFCANPWMTGLHAHVGSQGCSLEMLSQGAVVLSELANEIDAA--------AGTSRIKVFNIGGGLSTNFDNEDVSPTFAEYVEVLRREAPQLFERTGRT---------------------ILTEFGSSVSSKTGWVVSEVEYVKTHPRVDGDD------------LTQTAIIHAGSDLFLRACYRPELFARRMSVYN-------------SAGLISTAPMSVQNVAGPLCFGGDMVGRRVELPTISRGDFVVVHDTGANTMSMFSRHCSRPAPAVFGYRASED-------EISLQLLKPAETPEQVMSFWG 1224          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: ETP47423.1 (hypothetical protein F442_06553 [Phytophthora parasitica P10297])

HSP 1 Score: 338.2 bits (866), Expect = 4.700e-89
Identity = 192/527 (36.43%), Postives = 286/527 (54.27%), Query Frame = 0
Query:    7 DSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            D++  ++V   +  + ++   +      + + YDLDA+   F +L+ +FP+HF H +A+K+ P+ F ++ AI   +GLE AS +EV+ AL  GCPP +IVFDSP KT ++L FA++ G+ +NA+  +ELD I     A   S+FP          P IGLRINPL+GAGT   LSV+T  SKFGVPLT +                   N+ ++I++F   PW+TGLH HVGSQG  ++ L+QG  VL  L  E++ +         G  RI  L+IGGGL+ N+ +    PT A+ VEVLR  AP LF     +                     ++TE+G S+++KT W+ S VEY   +   DG +              +TAI+HAG+D+ LR CY P  F  R +V++               G +      + N+AGPLCF GD++   ++LP +  GD++VVHD G  T+++FSR+CSR APAV GYR   +        +++++L+  E  E V+ FWG
Sbjct:  778 DAQVARVVQHMVEERVLVNEDQPEDETKLAVVYDLDAIDMAFQALLTSFPVHFEHRFAMKSCPLSFFIKRAIENDVGLECASTVEVKHALRLGCPPHRIVFDSPCKTRRDLQFAINAGVEVNADNFDELDIIREHAEAIFQSSFPECTPRYAGNLPRIGLRINPLLGAGTNSCLSVSTVQSKFGVPLTPE-------------------NRARIIAFFCANPWMTGLHAHVGSQGCSLEMLSQGAVVLSELANEIDAA--------AGTSRIKVLNIGGGLSTNFDNEDVSPTFAEYVEVLRREAPQLFERTGRT---------------------ILTEFGSSVSSKTGWVVSEVEYVKTHPRVDGDD------------LTQTAIIHAGSDLFLRACYRPELFARRMSVYN-------------SAGLISTAPMSVQNVAGPLCFGGDMVGRRVELPTISRGDFVVVHDTGANTMSMFSRHCSRPAPAVFGYRASED-------EISLQLLKPAETPEQVMSFWG 1224          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: XP_002999089.1 (pyridoxal-dependent decarboxylase, putative [Phytophthora infestans T30-4] >EEY69235.1 pyridoxal-dependent decarboxylase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 335.9 bits (860), Expect = 2.300e-88
Identity = 193/527 (36.62%), Postives = 285/527 (54.08%), Query Frame = 0
Query:    7 DSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            D++  ++V   +  + +    +      + + YDLDA+   F +L+ +FP+HF H +A+K+ P+ F ++ AI   +GLE ASI+EV+ AL  GCPP +IVFDSP KT ++L FA+  G+ +NA+  +ELD I     A   S+FP          P IGLRINPL+GAG    LSV+T  SKFGVPLT +                   N+ ++I++F   P++TGLH HVGSQG  ++ L+QG  VL  L  E++ +         G  RI  L+IGGGL+ N+   +  PT A+ VEVLR  AP LF     +                     ++TE+G S+++KT W+ S VEY   + + DG +              +TAI+HAG+D+ LR CY P  F  R +V++               G V      + N+AGPLCF GD++   ++LP +  GD++VVHD G  T+++FSR+CSR APAV GYR   +        V++++L+  E  E V+ FWG
Sbjct:  753 DAQVARVVQHMIEERVLANEDQPEDETKLAVVYDLDAIDMAFQALLTSFPVHFEHRFAMKSCPLSFFIKRAIENDVGLECASIVEVKHALRLGCPPHRIVFDSPCKTRRDLQFAIIAGVEVNADNFDELDIIREHAEAIFQSSFPECTPRYAGNLPRIGLRINPLLGAGANSCLSVSTVQSKFGVPLTAE-------------------NRARIIAFFCANPYMTGLHAHVGSQGCSLEMLSQGAVVLSELANEIDAA--------AGTSRIKVLNIGGGLSTNFDDEEVSPTFAEYVEVLRREAPQLFKRTGRT---------------------ILTEFGSSVSSKTGWVVSEVEYVKAHPQVDGDD------------LTQTAIIHAGSDLFLRACYRPELFARRMSVYN-------------PAGLVSMAPVSVQNVAGPLCFGGDMVGRRVELPTISQGDFVVVHDTGANTMSMFSRHCSRPAPAVFGYRASED-------EVSLQLLKAAETPEQVMSFWG 1199          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: XP_024571538.1 (diaminopimelate decarboxylase [Plasmopara halstedii] >CEG35169.1 diaminopimelate decarboxylase [Plasmopara halstedii])

HSP 1 Score: 331.3 bits (848), Expect = 5.700e-87
Identity = 195/527 (37.00%), Postives = 287/527 (54.46%), Query Frame = 0
Query:    8 SRQVQ-IVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPP---------PSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTP-RLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFW 524
            +R VQ +V   + A G+    + +    + + YDL+A+   F +L+ +FP+HF H +A+K+ P+ F ++ AI+  +GLE ASI+EV+ AL  GCPP +IVFDSP KT ++L FAL+ G+ +NA+  +EL+ I     A   S+FP          P IGLR+NPL+GAG    LSV+T  SKFGVPLT                     N+ K+I+++   PW+TGLH HVGSQG  ++ L+Q   +L  L  E++ +         G  ++  L+IGGGL AN+ +    PT A  V +LR  AP LF     +                     ++TE+G S+++KT W+ S VEY  ++   D  +             ++TAI+HAG+D+ LR CY P  F HR +V D  G              V +  P  L N+AGPLCF GD+    +KLP +  GD++V+HD G  T+++FSR+CSR APAV GYR       E+G  +++++L+  E  E VL FW
Sbjct:  761 ARVVQYLVKNRILAHGMTSEDETK----LAVIYDLEAVDMAFQTLLCSFPVHFEHRFAMKSCPLSFFIKMAIKNNIGLECASIVEVKHALRLGCPPHRIVFDSPCKTRRDLLFALNAGVEVNADNFDELEIIREHADAIFQSSFPECTPRNAGHLPRIGLRVNPLLGAGNNACLSVSTVHSKFGVPLT-------------------KKNRAKIIAFYCANPWMTGLHAHVGSQGCSLEMLSQSAVMLNELANEIDAA--------AGTSKVEALNIGGGLPANFDNENVTPTFADYVAILRRKAPQLFKHTSRT---------------------ILTEFGSSVSSKTGWVVSEVEYVKEHSYVDNND------------LIQTAIIHAGSDLFLRACYRPEIFAHRMSVFDSSG--------------VASTAPISLQNVAGPLCFGGDIAGRRMKLPTISRGDFVVIHDTGANTMSMFSRHCSRPAPAVFGYR-------ESGKEISLQLLKPAETAEEVLSFW 1202          
BLAST of NO23G01810 vs. NCBI_GenBank
Match: CBJ49155.1 (diaminopimelate decarboxylase [Ectocarpus siliculosus])

HSP 1 Score: 330.9 bits (847), Expect = 7.400e-87
Identity = 201/518 (38.80%), Postives = 284/518 (54.83%), Query Frame = 0
Query:   26 PSKARAGEDVVIAYDLDALHTGFDSLVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGCPPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTFPPPSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSSSYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTEEVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLREAAPSLFVPPPLSSSNXXXXXXXXXXXXXXPCVRVVTEYGRSLTAKTAWLASRVEY--AFDNQEEDGREG----QREEEGGR--GTTGL-----------RTAILHAGADVLLRECYVPGKFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIVSGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNEAGMGVTVEVLQGREAGESVLEFWG 525
            PS  R  ++  + +D+DAL   F +  +AFP H+ HC A+K+ P+  ++Q A+RAGLG+EAAS +E+   L  GCP     FDSPAKT  EL+ AL++G+ INAN+L ELDRI +I+     +T     +G+R+NPLVGAG+I ELSV+T+TSKF VP+T                    +N   V+  F K+PWL  LH HVGSQG  ++QLA+G+ VL  + + ++  L        G+ R+T LDIGGGL ANY S++  PT  +    L++AAPSLF        N                  VVTE+GR+  AK A   S+VEY  + D    +GR      Q+EE+     G+ G            +T + H GAD+ LR  Y PG++ HR +++ ++G            G    RT    ++AGPLCF GD +  G  LP+   GD +VVHD G  TL+LFSR+CSR  P+V GY    +G       V V +++ +E+ + V  FWG
Sbjct:   27 PSLPREPDNSAVVFDVDALRAAFAAAKQAFPPHWNHCVAVKSCPLSVVVQEAVRAGLGIEAASFVELYMGLALGCPAVLAAFDSPAKTDGELEMALARGVLINANSLVELDRIDAIIKRQGCAT--SARVGIRLNPLVGAGSIAELSVSTSTSKFAVPMT-------------------PANVQAVVDSFRKWPWLVALHTHVGSQGYSVEQLAEGIAVLCEIADVIDSKL--------GKGRVTLLDIGGGLPANYDSDEVSPTFHEYAAALKKAAPSLF-------HNTERI--------------VVTEFGRAFVAKVAMTVSKVEYVRSSDGSGAEGRAAGKATQQEEDPSNVVGSPGKVPESSLPVEDHQTLVTHIGADLFLRTSYCPGRYSHRLSMYSRNGAAL---------GGSAIRT----DVAGPLCFQGDYVARGASLPRASPGDLVVVHDTGANTLSLFSRHCSRRFPSVYGYARNADG------TVCVRLVKEKESVQDVARFWG 475          
The following BLAST results are available for this feature:
BLAST of NO23G01810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27772.13.400e-15656.80diaminopimelate decarboxylase [Nannochloropsis gad... [more]
GAX99392.15.000e-9138.08Hypothetical protein PINS_007225 [Pythium insidios... [more]
ETI49711.19.400e-9036.62hypothetical protein F443_06510 [Phytophthora para... [more]
XP_009519084.12.700e-8937.00hypothetical protein PHYSODRAFT_478468 [Phytophtho... [more]
XP_008892032.12.700e-8936.43hypothetical protein PPTG_02609 [Phytophthora para... [more]
ETM49343.13.600e-8936.43hypothetical protein L914_06305 [Phytophthora para... [more]
ETP47423.14.700e-8936.43hypothetical protein F442_06553 [Phytophthora para... [more]
XP_002999089.12.300e-8836.62pyridoxal-dependent decarboxylase, putative [Phyto... [more]
XP_024571538.15.700e-8737.00diaminopimelate decarboxylase [Plasmopara halstedi... [more]
CBJ49155.17.400e-8738.80diaminopimelate decarboxylase [Ectocarpus siliculo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL038nonsL038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL035nonsL035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR062ncniR062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR126ngnoR126Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR125ngnoR125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR124ngnoR124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010469NSK010469Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO23G01810.1NO23G01810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|560563gene_10012Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100187g10gene2782Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO23G01810.1NO23G01810.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO23G01810 ID=NO23G01810|Name=NO23G01810|organism=Nannochloropsis oceanica|type=gene|length=1596bp
ATGCCGCCCGCCGCCTACGACTCCCGCCAGGTGCAAATAGTCCTCCAATC
ATTGCGTGCCCAAGGTATCCTGCAGCCCTCCAAGGCCCGCGCAGGGGAAG
ACGTGGTGATTGCCTATGACTTGGATGCCTTGCATACGGGGTTCGACAGC
CTCGTCAAAGCCTTCCCCCTTCATTTCCTCCACTGCTATGCCATCAAAGC
CGCACCCATGGGCTTCATCCTCCAAGCAGCCATTCGGGCAGGGCTAGGAC
TCGAAGCTGCTTCAATTCTAGAGGTCGAAAGCGCCCTCTTTCACGGCTGT
CCCCCGGAAAAGATTGTCTTTGACTCCCCCGCCAAGACCTACAAAGAGCT
GGACTTCGCCTTGTCCAAAGGTATTCACATCAACGCCAACACTCTCGAGG
AACTTGATCGCATTGCCTCCATCCTCTCAGCAACATCCTCCTCCACTTTT
CCCCCTCCCTCCATCGGCTTGCGTATCAACCCCCTCGTCGGCGCGGGTAC
AATCCAAGAACTCAGCGTCGCCACTGCCACATCCAAATTCGGTGTCCCCC
TCACCCTCGACACCTCCTCCTTCTCCTCTTCTTCTTTTCCTTGTTCCTCC
TCTTATTTTTCCTTGAGCAATAAACATAAAGTCATCTCCTACTTCCATAA
GTACCCCTGGCTGACTGGCCTCCACATACACGTCGGGTCGCAAGGACTCG
GGATGGATCAACTAGCACAAGGCGTTAAGGTCCTCATCGCCCTCACAGAA
GAAGTAGAGGAATCGCTTTCTAAGAATGGGGCAGAGATGGAGGGAAGGAG
AAGGATCACCACGTTGGATATCGGAGGGGGGTTGGCCGCGAATTATCTAT
CGAATCAAGCCATGCCTACTCATGCGCAGCTGGTGGAGGTTTTGAGGGAG
GCGGCTCCTTCTCTTTTCGTTCCGCCCCCACTTTCTTCCTCGAATAGAAA
CGGAAGCAATGGCAGCAGTGGCAGCAGTAGCAGTGGTCCTTGCGTGAGGG
TAGTGACGGAGTATGGTCGCTCCCTTACGGCGAAAACTGCCTGGCTTGCC
AGCCGGGTGGAGTACGCTTTTGACAACCAGGAGGAAGACGGGAGGGAGGG
ACAAAGGGAGGAAGAGGGAGGACGCGGGACGACAGGATTGCGAACGGCAA
TTCTGCATGCGGGTGCCGACGTGTTGTTGCGCGAGTGCTACGTGCCGGGG
AAGTTCTACCATCGATTTACAGTGCACGACAAAGATGGCCACCTGGCCGA
AGTAAAGGAAGGAGGGAAGGAGGAAGGGCAAGTGCACGCACGCACCCCTC
GCCTTCACAATCTGGCTGGGCCTCTGTGCTTTGCGGGGGACGTGATTGTA
AGCGGCATAAAGTTACCAAAAGTTGAGTCAGGAGACTGGCTTGTCGTGCA
TGATGTCGGAGGGTACACTCTGGCCTTGTTTTCTCGCTATTGCTCAAGAG
CCGCGCCAGCCGTGGTTGGGTATAGAATAGGAAGAGAGGGAGGGAATGAG
GCAGGGATGGGGGTGACGGTGGAGGTGCTTCAGGGAAGGGAGGCGGGGGA
GAGTGTGTTGGAATTTTGGGGGCCGCGAGGGGAGAGGGAAAGGTAG
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protein sequence of NO23G01810.1

>NO23G01810.1-protein ID=NO23G01810.1-protein|Name=NO23G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=532bp
MPPAAYDSRQVQIVLQSLRAQGILQPSKARAGEDVVIAYDLDALHTGFDS
LVKAFPLHFLHCYAIKAAPMGFILQAAIRAGLGLEAASILEVESALFHGC
PPEKIVFDSPAKTYKELDFALSKGIHINANTLEELDRIASILSATSSSTF
PPPSIGLRINPLVGAGTIQELSVATATSKFGVPLTLDTSSFSSSSFPCSS
SYFSLSNKHKVISYFHKYPWLTGLHIHVGSQGLGMDQLAQGVKVLIALTE
EVEESLSKNGAEMEGRRRITTLDIGGGLAANYLSNQAMPTHAQLVEVLRE
AAPSLFVPPPLSSSNRNGSNGSSGSSSSGPCVRVVTEYGRSLTAKTAWLA
SRVEYAFDNQEEDGREGQREEEGGRGTTGLRTAILHAGADVLLRECYVPG
KFYHRFTVHDKDGHLAEVKEGGKEEGQVHARTPRLHNLAGPLCFAGDVIV
SGIKLPKVESGDWLVVHDVGGYTLALFSRYCSRAAPAVVGYRIGREGGNE
AGMGVTVEVLQGREAGESVLEFWGPRGERER*
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Synonyms
Publications