NO16G01530, NO16G01530 (gene) Nannochloropsis oceanica

Overview
NameNO16G01530
Unique NameNO16G01530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1200
Alignment locationchr16:464014..465213 -

Link to JBrowse

Properties
Property NameValue
DescriptionFilamentous hemagglutinin family N-terminal domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:464014..465213 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01530.1NO16G01530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01530.1NO16G01530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01530 ID=NO16G01530|Name=NO16G01530|organism=Nannochloropsis oceanica|type=gene|length=1200bp
ATGCGTTCCTTGAAGCCCTCCCTGATGTGCTCCCTGGCCCTGTTTGCGGC
CGCCGTCTTGGCTGACGAGGGTGATACCTCGGCTCCCACGCCCGTCCCGA
CCAAGGCCGCTTACACGGGGCTTACGCTTTCTCCCACCGCGTCCCCTACG
AAGTCGGTCTACACGTCCCAGCCGACGTCTTCGATCGTGACGCTCGAGGC
ACCGACGGTTGCCCCTACGGCAATTATCACGACTGCCCCTACTTCAGCTC
CCACTGTAGCACCCACGGCCGCTCCTACTGCTGCTCCTACTGCTGCGCCT
TCTGCTACTCCTACTGCTGCGCCTACTACAACCCCCACGGCCGCTCCTAC
GGCTGCCCCAACGGTTGCCCCCACAGCCGCTCCTACGGCCGCTCCTACGG
TTGCCCCAACGGGTACGCCTACTGCTGTACCTACTGCCGCCCCCACTTCA
ACCCCCACGGTTGCTCCTACGGCTTTCCCGACAGCGGCGCCCACCGCGAT
GATCTATACTCCTCCTCCCACCGCTGCCCCCACGGTTGCTCCTACGGTTT
CCCCTACGGCGTCGCCCACCGAGATGATCTATACTCCTCCTCCCACCGCT
GCCCCCACACTGGCGCCAACAGCCACACCCACGGCGGCCCCTACGGCCGC
TCCTACGGTTGCCCCCACGGTTGCTCCTACGGCTTTCCCGACAGCGGCGC
CCACCGCGATGATCTATACTCCTCCTCCCACCGCTGCCCCCACACTGGCG
CCAACAGCCACACCCACGGCGGCCCCGACAGCCTCGCCCACGGTTGCTCC
TACGGTTTCCCCTACGGCGTCGCCTACCGAGATGATCTATACTCCTCCTC
CCACTACTGCCCCCACACTGGCGCCAACGGCTTCGCCCACGGCGGCCCCG
ACAGCCTCGCCCACGGTTGCTCCTACGGCGGCGCCAACCACCACTCCTAC
CGCTGCCGCCACGGCAGCCCCTACTTCGATCCCTGAGATTTCTTGGGGCC
CGCCCGAGCCGACCCAGACAATCACGCTTGCCCCAACGCCGTCACCGACC
GAGAAATCCGTCTACTCTGCTCCCGCTTCAGAACCAAATGCGGTAGATGA
ACCGGTTGTGTACAGCCCTGCCAAGCCCTCTAGCCCCGCTCCCACGGTGT
TGCCCACGTCTGCGACAAACGGTCGTCATCTGCGCCGAGGAAGCGCCTAG
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protein sequence of NO16G01530.1

>NO16G01530.1-protein ID=NO16G01530.1-protein|Name=NO16G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=400bp
MRSLKPSLMCSLALFAAAVLADEGDTSAPTPVPTKAAYTGLTLSPTASPT
KSVYTSQPTSSIVTLEAPTVAPTAIITTAPTSAPTVAPTAAPTAAPTAAP
SATPTAAPTTTPTAAPTAAPTVAPTAAPTAAPTVAPTGTPTAVPTAAPTS
TPTVAPTAFPTAAPTAMIYTPPPTAAPTVAPTVSPTASPTEMIYTPPPTA
APTLAPTATPTAAPTAAPTVAPTVAPTAFPTAAPTAMIYTPPPTAAPTLA
PTATPTAAPTASPTVAPTVSPTASPTEMIYTPPPTTAPTLAPTASPTAAP
TASPTVAPTAAPTTTPTAAATAAPTSIPEISWGPPEPTQTITLAPTPSPT
EKSVYSAPASEPNAVDEPVVYSPAKPSSPAPTVLPTSATNGRHLRRGSA*
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Synonyms
Publications