NO14G01670, NO14G01670 (gene) Nannochloropsis oceanica

Overview
NameNO14G01670
Unique NameNO14G01670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1776
Alignment locationchr14:517464..519239 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:517464..519239 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004040amidase activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR036928AS_sf
IPR000120Amidase
IPR023631Amidase_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Homology
[Close]
BLAST of NO14G01670 vs. NCBI_GenBank
Match: EWM24666.1 (amidotransferase a subunit for asp-trna glu-trna [Nannochloropsis gaditana])

HSP 1 Score: 682.2 bits (1759), Expect = 1.500e-192
Identity = 375/602 (62.29%), Postives = 452/602 (75.08%), Query Frame = 0 
Query:    3 PTRLVLCGPSTSRRRPGHWLPRRPPAATTTTIDLCSISSRPP--------RTYACQPFPLPPSVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAALAQAAAASQSTAGGRPLHGIPIAVKDNFCTAGVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDGPHQLCFTEALQ------TAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAMSQVDVILTPVTPSGPFPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRRT 591
            P+R +    S  R R G   PRRP           S  S PP          Y+ Q      S+VE AAAI++G   P  ++Q+CL RQ+E +GLN+FVT +  AA  +AA A + +    PLHGIPIAVKDNFCTAGVRTTASSRMLA+FVPPYSATAV+RLEA+GA+VVGKTNMDEFGMGSATLFSHFG+T++PWS +                RL AGGS     VAVATG+ LAALGSDTGGS+RQPAA CGLVGLKP+YGR+SRHGLIAYASSLDCPG+LTRTVADAALVLD VAG DPL DS+C + PH+ CF   ++       AGL  SLRGLKVG+ AEF ++ELE S VTAWEEGARLL+DAGA+V+PVSVPSIPLALP YFVIACAEASSNLARYDGIR+G R S +   S+      + ++E +  DQ  LH+FIT SRS+GFG EVQRR+++GCRVLSA+ Y+ YYEKALAAR+R+R++M  A+S VDV+LTPVTP+GPFPLTTPAEPAALM+ND+MTVPASLAGLPA++VP+ + PSSF   +PVP+GLQLIGR   E++LL VA+ALE RC+F+++IP YV+K   T
Sbjct:   19 PSRALGNSRSRKRLRDG---PRRPVDIRRAQHACPSSPSSPPGLQRRVTRTNYSTQSQQSAVSMVEIAAAIRKGNADPFSVMQRCLSRQQETSGLNSFVTVLRHAAEKEAAVAGRHSVMKGPLHGIPIAVKDNFCTAGVRTTASSRMLANFVPPYSATAVSRLEASGAIVVGKTNMDEFGMGSATLFSHFGKTINPWSQAAEKGDKP---------RLAAGGSSGGSAVAVATGSALAALGSDTGGSVRQPAAFCGLVGLKPTYGRVSRHGLIAYASSLDCPGVLTRTVADAALVLDVVAGRDPL-DSTCLEQPHRPCFDRTMEAAASSRAAGLAVSLRGLKVGIPAEFAIQELEGSAVTAWEEGARLLRDAGADVLPVSVPSIPLALPTYFVIACAEASSNLARYDGIRFGFRGSKSLRASRSKEGIGSADTEED--DQRALHDFITASRSQGFGDEVQRRVISGCRVLSAQAYATYYEKALAARIRLRREMNTALSHVDVLLTPVTPTGPFPLTTPAEPAALMVNDVMTVPASLAGLPAIAVPVDLAPSSFVPGLPVPVGLQLIGRHLCEQQLLIVARALEVRCNFSERIPDYVVKATFT 605
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BLAST of NO14G01670 vs. NCBI_GenBank
Match: OQR84922.1 (glutamyl-tRNA(Gln) amidotransferase subunit [Achlya hypogyna])

HSP 1 Score: 439.5 bits (1129), Expect = 1.600e-119
Identity = 265/539 (49.17%), Postives = 340/539 (63.08%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVT-TMETAALAQAAAASQSTAGGR--PLHGIPIAVKDNFC-TAGVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDG-PHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAMSQ-VDVILTPVTPSGPFPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            S+ +A+AA+  G  T   + + C+++     GLN FV  T++ A  A  A+ ++  AG    PL GIPIAVKD FC    V TT  S++L  F  PY +TA  RL  AGAV +GK NMDEFGMGSAT +S FG T++PWS +             G   L AGGS      A+A+G C AALGSDTGGS+RQPAA CG+ G+KP+YGRISRHG+IAYASSLD P L T+T  DAALVL  +AGPD    ++  DG PH    T+          LRG+ VG+  E+ V EL  + ++ W+EG R L+DAGA V+ VS+P    ALP Y+++ACAEASSNL+RYDG+RYG+RA+         +S  A  ++  A     LH+    +RSEGFGPEVQRRIL+G  VLSA  ++ YYE+A+  R RIR D A A +  VDV+LTP TP+GPF L T A+P  + +NDIMT+PASLAGLPAVSVP +V          +PLGLQLIG P  E  +L  A ALE+R  F + +P  V +G R
Sbjct:   15 SLADASAALSAGTTTAVALTEACIRQIEATRGLNMFVAETIDDARAAAVASDARRAAGTAKGPLDGIPIAVKDIFCMDNSVPTTCGSKILQGFRAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSTFGATINPWSKN------------LGDDALVAGGSSGASAAAIASGCCFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPALFTKTARDAALVLPLLAGPDGKDSTAIQDGVPHDWLPTDVSH-------LRGVTVGVPNEYFVEELPETILSVWDEGIRHLRDAGARVVEVSLPMTKYALPTYYILACAEASSNLSRYDGVRYGYRAA---------TSDDAAVADDTANQANALHDLYCRTRSEGFGPEVQRRILSGTFVLSAGAFNDYYERAVIVRQRIRADFAAAFATGVDVLLTPTTPTGPFSLHTAADPIEMFMNDIMTIPASLAGLPAVSVPAAVTADG------LPLGLQLIGAPRTEDTVLLAAGALESRLRFDELVPDRVYEGSR 519
[Close]
BLAST of NO14G01670 vs. NCBI_GenBank
Match: XP_009824686.1 (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, variant 1 [Aphanomyces astaci] >ETV86208.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, variant 1 [Aphanomyces astaci])

HSP 1 Score: 421.8 bits (1083), Expect = 3.600e-114
Identity = 254/538 (47.21%), Postives = 330/538 (61.34%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAALAQAAAASQSTAGGR---PLHGIPIAVKDNFCTA-GVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDGPHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAM-SQVDVILTPVTPSGPFPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            S+ +A+AA+  G  T   + Q C+ +       N FV T   +ALA+A+ +      GR   PL GIP+ VKD FC   GV TTASS++L  FV PY +TA  RL  AGA+ +GK NMDEF MGS T +S FG T++PWS               G   L AGGS    X  VA+G C AALGSDTGGS+RQPAA CG+ GLKP+YGRISRHG+IA+ASSLD PG+L +T+ DAA+VL A+AGPD   DS+         +  A +T   N   + L VG+  E+ V+EL  S +  W++G   L  +G  V+  S+P+   ALP Y+++ACAEASSNL+RYDG+RYG RA         + +++A  ++        LH+    +RSEGFG EVQRRIL+G  VLSA   + YYE+A+  R  IR D A    S +DV+LTP TPSGPF +   A P  + +NDIMT+PASLAGLP+VSVP +V+         +PLGLQLIG P +E  LL+VA  LE R DF++ IP  VL   R
Sbjct:   25 SLTDASAALANGSVTSVALTQACIDQIEATKRFNMFVATTFDSALARASESDARRRDGRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSD------------LGDRALVAGGSSGASXXXVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDG-HDSTALPDKLPSQWEPASETDATN--TKQLTVGVPKEYYVKELPESILKVWDQGIEWLLQSGVRVVEASLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRA------ELNNEAAAAAVADASNNQANALHDLYCRTRSEGFGDEVQRRILSGTFVLSAGALADYYERAVLVRQTIRDDFASTFESGIDVLLTPTTPSGPFAVHGKANPVDMFMNDIMTIPASLAGLPSVSVPAAVLDQ-------MPLGLQLIGAPHQEHTLLHVAHLLEQRADFSRHIPLRVLTSAR 534
[Close]
BLAST of NO14G01670 vs. NCBI_GenBank
Match: XP_008863759.1 (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Aphanomyces invadans] >ETW07666.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Aphanomyces invadans])

HSP 1 Score: 419.9 bits (1078), Expect = 1.400e-113
Identity = 256/533 (48.03%), Postives = 335/533 (62.85%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAALAQAAAASQSTAGGR---PLHGIPIAVKDNFCTA-GVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDGPHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAM-SQVDVILTPVTPSGPFPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYV 585
            S+ +A+ A+  G  T   + Q C+ +     G N FV T   AAL  AA A +    GR   PL GIP+ VKD FC    V TTA S++L  FV PY +TA  RL  AGA+ +GK NMDEF MGS T +S FG T++PWS +             G   L AGGS  XXX    +G C AALGSDTGGS+RQPAA CG+ GLKP+YGRISRHG+IA+ASSLD PG+LT+T+ DA++VL A+AGPD    ++  D       +   + A    S + L VG+  E+ V+EL  + +  W++G   LQ AG  V+  S+P+   ALP Y++IACAEASSNL+RYDG+RYG R     A+   D+++  T+++  A     LH+    +RSEGFG EVQRRIL+G  VLSA  ++ YYE+A+  R  IR+D A +  S +DV+LTP TPSGPF +   A+P  + +NDIMT+PASLAGLP+VSVP +V+      D  VPLGLQLIG P +ER +L VAQ LE + DF +  P YV
Sbjct:   26 SLTDASEALANGTVTSVALTQACMDQIEATRGFNMFVATTFDAALEHAAEADKRRRDGRARGPLDGIPVGVKDIFCMRNAVPTTACSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSKN------------LGEQALVAGGSSGXXXXXXXSGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILTKTIRDASIVLQAIAGPDGHDSTALPDK-----LSSQWEAAA---SRKQLTVGVPKEYYVKELPETILKVWDQGIEWLQQAGVRVVETSLPTTKYALPTYYIIACAEASSNLSRYDGVRYGFR-----AELNRDAATDTTDNQANA-----LHDSYCRTRSEGFGDEVQRRILSGTFVLSAGAFADYYERAVLVRQSIREDFAASFDSGIDVMLTPTTPSGPFFVHGKADPIDMFMNDIMTIPASLAGLPSVSVPTAVL------DEQVPLGLQLIGAPQQERTMLDVAQLLEDKADFYRHTPSYV 522
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BLAST of NO14G01670 vs. NCBI_GenBank
Match: XP_008607039.1 (hypothetical protein SDRG_03193 [Saprolegnia diclina VS20] >EQC39767.1 hypothetical protein SDRG_03193 [Saprolegnia diclina VS20])

HSP 1 Score: 416.0 bits (1068), Expect = 2.000e-112
Identity = 260/539 (48.24%), Postives = 336/539 (62.34%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVT-TMETA-ALAQAAAASQSTAGGR-PLHGIPIAVKDNFCTAG-VRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDG-PHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAM-SQVDVILTPVTPSGPFPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            S++E + A+  G  T T + + C+ +      LN FV  T E+A ALA A+ A +++   R PL GIP+ VKD FC      TT  S++L  F  PY +TA  RL  AGAV +GK NMDEFGMGSAT +S FG T++PWS +                 L +GGS    X A+A+G C AALGSDTGGS+RQPAA CG+ G+KP+YGRISRHG+IAYASSLD P L T+T  DA+LVL  +AGPD    ++  +  P+  C     Q      SL+GL VG+  E+ V EL  + +  W++G R L+DAGA V+ VS+P+   ALP Y+++ACAEASSNL+RYDG+RYG RA++    S  D S+ AT           LH+    +RSEGFGPEVQRRIL+G  VLSA  ++ YYE+A+  R RIR D A    S VDV+LTP TP+GPF L   A+P  + +NDIMT+PASLAGLPA+S+P ++          +PLGLQLIG P  E  LL  A ALE R  F + IP  V +G R
Sbjct:   32 SLLEVSQALAAGTTTATALTEACIAQINATRDLNMFVADTFESARALAAASDARRASGAARGPLDGIPVGVKDIFCMHNEAPTTCGSKILDGFHAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSTFGATINPWSTN------------LTDAALVSGGSSGASXXAIASGCCFAALGSDTGGSVRQPAAYCGVTGIKPNYGRISRHGMIAYASSLDTPALFTKTARDASLVLPLLAGPDGKDATAIQEPIPNAWC-----QLPADTSSLKGLTVGVPNEYYVEELPEAMLAVWDDGIRHLRDAGARVVEVSLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRAATT-ETSVADDSNQAT----------ALHDLYCRTRSEGFGPEVQRRILSGTFVLSAGAFNDYYERAVIVRQRIRDDFAATFTSGVDVLLTPTTPTGPFSLHGAADPIEMFMNDIMTIPASLAGLPALSLPAAISGG-------LPLGLQLIGAPQTEDRLLSAAVALEDRLAFRQLIPARVYEGTR 535
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BLAST of NO14G01670 vs. NCBI_GenBank
Match: XP_009538553.1 (hypothetical protein PHYSODRAFT_566222 [Phytophthora sojae] >EGZ05692.1 hypothetical protein PHYSODRAFT_566222 [Phytophthora sojae])

HSP 1 Score: 415.2 bits (1066), Expect = 3.300e-112
Identity = 251/544 (46.14%), Postives = 335/544 (61.58%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAALAQAAAASQSTAGGRP---LHGIPIAVKDNFCTAGVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDG--PHQLCF-TEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAMSQ--VDVILTPVTPSGPFPL---TTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            +++EA+ A+ +G+ +  Q+ + C+Q+  +    N FV T    AL  A A+ +  A G+    L GIP+A KD FCT  + TTA S++L  FVPPY +TA  RL   GAV +GK NMDEF MGSATL+S FG T++PWS               G   +     XXXXX         AALGSDTGGS+RQPAA CG+VGLKPSYGR+SRHG+I+YASSLD PG+  R+V DAA+VL A+AGPD + DS+C     P   C  T        N  L G++VG+ AE+ V EL    ++ W++G   L++AGA+V+ VS+P+  L +PAY+++ACAEASSNL+RYDG+RYG+RA     ++Q D S             G LH+    +RSEGFG EVQRRIL+G  VLSA   S YYE+ +  R RIRQD  +   +  VDV+LTP TPSGPFP+       +P ++ LND+MTVPA++AG+P++S     VP++   D   PLGLQL+G    E  +L VA ALE R  F   +P+ V    R
Sbjct:   28 TLLEASEALDRGDVSAVQLTEACIQQVEKTRAFNMFVATDFDRALDLARASDERRAAGKARGLLDGIPVAFKDIFCTKNLTTTAGSKVLEGFVPPYESTATQRLLDQGAVPLGKLNMDEFAMGSATLYSKFGATINPWSKD------------LGDGAVXXXXXXXXXXXXXXXXXXXAALGSDTGGSVRQPAAYCGIVGLKPSYGRVSRHGMISYASSLDTPGIFARSVGDAAVVLKAIAGPDHM-DSTCMTDALPEAWCSNTVEASQQSKNVDLTGVRVGVPAEYFVEELPKEILSVWDKGVAWLREAGAQVVSVSLPTTKLCIPAYYILACAEASSNLSRYDGVRYGYRAKDIALEAQEDQS-------------GALHDLYCRTRSEGFGEEVQRRILSGTFVLSAGAMSDYYERGVVLRQRIRQDFQRVFEEQDVDVLLTPTTPSGPFPVHNKKAKEDPVSMYLNDVMTVPANMAGVPSIS-----VPAALTTDGDYPLGLQLMGARKTEERMLQVANALEQRASFGDLVPERVYATER 540
[Close]
BLAST of NO14G01670 vs. NCBI_GenBank
Match: XP_009824684.1 (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, variant 2 [Aphanomyces astaci] >ETV86209.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit, variant 2 [Aphanomyces astaci])

HSP 1 Score: 407.9 bits (1047), Expect = 5.300e-110
Identity = 245/503 (48.71%), Postives = 314/503 (62.43%), Query Frame = 0 
Query:   92 FVTTMETAALAQAAAASQSTAGGR---PLHGIPIAVKDNFCTA-GVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDGPHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAM-SQVDVILTPVTPSGPFPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            FV T   +ALA+A+ +      GR   PL GIP+ VKD FC   GV TTASS++L  FV PY +TA  RL  AGA+ +GK NMDEF MGS T +S FG T++PWS               G   L AGGS    X  VA+G C AALGSDTGGS+RQPAA CG+ GLKP+YGRISRHG+IA+ASSLD PG+L +T+ DAA+VL A+AGPD   DS+         +  A +T   N   + L VG+  E+ V+EL  S +  W++G   L  +G  V+  S+P+   ALP Y+++ACAEASSNL+RYDG+RYG RA         + +++A  ++        LH+    +RSEGFG EVQRRIL+G  VLSA   + YYE+A+  R  IR D A    S +DV+LTP TPSGPF +   A P  + +NDIMT+PASLAGLP+VSVP +V+         +PLGLQLIG P +E  LL+VA  LE R DF++ IP  VL   R
Sbjct:    2 FVATTFDSALARASESDARRRDGRACGPLDGIPVGVKDIFCMQNGVPTTASSKILQGFVAPYESTATQRLLDAGAIPLGKLNMDEFAMGSGTTYSTFGPTINPWSSD------------LGDRALVAGGSSGASXXXVASGCCFAALGSDTGGSVRQPAAYCGVTGLKPNYGRISRHGMIAFASSLDTPGILAKTIRDAAIVLHAIAGPDG-HDSTALPDKLPSQWEPASETDATN--TKQLTVGVPKEYYVKELPESILKVWDQGIEWLLQSGVRVVEASLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRA------ELNNEAAAAAVADASNNQANALHDLYCRTRSEGFGDEVQRRILSGTFVLSAGALADYYERAVLVRQTIRDDFASTFESGIDVLLTPTTPSGPFAVHGKANPVDMFMNDIMTIPASLAGLPSVSVPAAVLDQ-------MPLGLQLIGAPHQEHTLLHVAHLLEQRADFSRHIPLRVLTSAR 476
[Close]
BLAST of NO14G01670 vs. NCBI_GenBank
Match: XP_012195396.1 (hypothetical protein SPRG_01639 [Saprolegnia parasitica CBS 223.65] >KDO33758.1 hypothetical protein SPRG_01639 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 407.1 bits (1045), Expect = 9.100e-110
Identity = 261/539 (48.42%), Postives = 333/539 (61.78%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVT-TMETA-ALAQAAAASQSTAGGR-PLHGIPIAVKDNFCTAG-VRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCWDG-PHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAM-SQVDVILTPVTPSGPFPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            S+VE + A+  G  T T++ + C+ +      LN FV  T E+A  LA A+ A +++   R PL GIP+ VKD FC      TT  S+ML  F  PY +TA  RL  AGAV +GK NMDEFGMGSAT +S FG T++PWS +                 L +   XXXXX         AALGSDTGGS+RQPAA CG+ G KP+YGRISRHG+IAYASSLD P L T+T  DA+LVL  +AGPD    ++  +  P   C     Q      SL+GL VG+  E+ V+EL  + +  W+EG R L+DAGA V+ VS+P+   ALP Y+++ACAEASSNL+RYDG+RYG RA+ + A S  D+S+ AT           LH+    +RSEGFGPEVQRRIL+G  VLSA  ++ YYE+A+  R RIR D A    S VDV+LTP TP+GPF L   A+P  + +NDIMT+PASLAGLPA+S+P ++       D  +PLGLQLIG P  E  LL  A ALE R  F + IP  V +G R
Sbjct:   22 SLVEVSQALAAGTTTATELTEACIAQINATRDLNMFVADTFESARTLAAASDARRASGAARGPLDGIPVGVKDIFCMHNEAPTTCGSKMLDGFHAPYESTATQRLLDAGAVPLGKLNMDEFGMGSATKYSQFGATINPWSTN------------LTDAALVSXXXXXXXXXXXXXXXXFAALGSDTGGSVRQPAAYCGVTGFKPNYGRISRHGMIAYASSLDTPALFTKTARDASLVLPLLAGPDGKDATAIQETLPDTWC-----QLPADTSSLKGLTVGVPNEYFVQELPEAMLHVWDEGIRHLRDAGARVVEVSLPTTKYALPTYYILACAEASSNLSRYDGVRYGFRAAVSEATSVADASNQAT----------ALHDLYCRTRSEGFGPEVQRRILSGTFVLSAGAFNDYYERAVIVRQRIRDDFAATFTSGVDVLLTPTTPTGPFSLHGAADPIEMFMNDIMTIPASLAGLPALSLPAAITD-----DAGLPLGLQLIGAPKTEDRLLSAAVALEDRLGFRQLIPSRVYEGTR 528
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BLAST of NO14G01670 vs. NCBI_GenBank
Match: ETI38317.1 (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica P1569] >ETK78556.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica] >ETL31967.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica] >ETL85212.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica] >ETM38377.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica] >ETP08197.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica CJ01A1])

HSP 1 Score: 400.6 bits (1028), Expect = 8.500e-108
Identity = 246/544 (45.22%), Postives = 328/544 (60.29%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAALAQAAAASQSTAGGRP---LHGIPIAVKDNFCTAGVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCW--DGPHQLCF-TEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAMSQ--VDVILTPVTPSGPFPL---TTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            S++ AA A+  G+ +  ++ Q C+ +  +    N FV+T    AL  A A+ +  A G     L GIP+ VKD FC   V TTASS++L +F+ PY +TA  RL   GAV +GK NMDEF MGS T++S FG T++PWS               G   +     XXXXX         AALGSDTGGS+RQPAA CG+VGLKPSYGR+SRHG+I+YASSLD PG+  R+V DAA+VL A+AGPD + DS+C   + P   C  T           L G++VG+ AE+ V+EL    ++ W  G   L+ AGA+V+ VS+P+  L +PAY+++ACAEASSNL+RYDG+RYG+RA     ++Q D S +             LH+    +RSEGFG EV+RRIL+G  VLSA   S YYE+ +  R RIRQD  +   +  VDV+LTP TPSGPFP+       +P ++ LND+MTVPA++AG+PA+S     +P++   D   PLGLQL+G    E  LL VA ALE R  F   +P  V    R
Sbjct:   34 SLLTAAKALDSGDVSAVELTQACIDQVEKTRAFNMFVSTDFERALQLAKASDERRAAGHSLGLLDGIPVGVKDLFCMENVPTTASSKILENFLSPYESTATQRLLDQGAVPLGKLNMDEFAMGSGTIYSKFGATINPWSKD------------LGDNAVXXXXXXXXXXXXXXXXXXXAALGSDTGGSVRQPAAYCGVVGLKPSYGRVSRHGMISYASSLDTPGVFARSVGDAAVVLQAIAGPDHM-DSTCMTDELPENWCSNTVETSQQSKQVDLTGVRVGVPAEYFVKELPEEILSVWNNGVAWLRGAGAQVVSVSLPTTKLCIPAYYILACAEASSNLSRYDGVRYGYRAKDIALETQEDQSDA-------------LHDLYCRTRSEGFGEEVKRRILSGTFVLSAGAMSDYYERGVILRQRIRQDFQRVFEEQGVDVLLTPTTPSGPFPVQNKQAKEDPVSMYLNDVMTVPANMAGVPAIS-----IPAALTRDSAYPLGLQLMGGRKTEERLLQVANALEQRASFGDLVPARVYATER 546
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BLAST of NO14G01670 vs. NCBI_GenBank
Match: XP_008895519.1 (aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica INRA-310] >ETN19697.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica INRA-310] >ETO67087.1 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit [Phytophthora parasitica P1976])

HSP 1 Score: 400.6 bits (1028), Expect = 8.500e-108
Identity = 246/544 (45.22%), Postives = 328/544 (60.29%), Query Frame = 0 
Query:   57 SVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAALAQAAAASQSTAGGRP---LHGIPIAVKDNFCTAGVRTTASSRMLADFVPPYSATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPXXXXXXXXXXYCGGLRLTAGGSXXXXXVAVATGACLAALGSDTGGSIRQPAALCGLVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLGDSSCW--DGPHQLCF-TEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAWEEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYGHRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRRILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAMSQ--VDVILTPVTPSGPFPL---TTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLGLQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRR 590
            S++ AA A+  G+ +  ++ Q C+ +  +    N FV+T    AL  A A+ +  A G     L GIP+ VKD FC   V TTASS++L +F+ PY +TA  RL   GAV +GK NMDEF MGS T++S FG T++PWS               G   +     XXXXX         AALGSDTGGS+RQPAA CG+VGLKPSYGR+SRHG+I+YASSLD PG+  R+V DAA+VL A+AGPD + DS+C   + P   C  T           L G++VG+ AE+ V+EL    ++ W  G   L+ AGA+V+ VS+P+  L +PAY+++ACAEASSNL+RYDG+RYG+RA     ++Q D S +             LH+    +RSEGFG EV+RRIL+G  VLSA   S YYE+ +  R RIRQD  +   +  VDV+LTP TPSGPFP+       +P ++ LND+MTVPA++AG+PA+S     +P++   D   PLGLQL+G    E  LL VA ALE R  F   +P  V    R
Sbjct:   34 SLLTAAKALDSGDVSAVELTQACIDQVEKTRAFNMFVSTDFERALQLAKASDERRAAGHSLGLLDGIPVGVKDLFCMENVPTTASSKILENFLSPYESTATQRLLDQGAVPLGKLNMDEFAMGSGTIYSKFGATINPWSKD------------LGDNAVXXXXXXXXXXXXXXXXXXXAALGSDTGGSVRQPAAYCGVVGLKPSYGRVSRHGMISYASSLDTPGVFARSVGDAAVVLQAIAGPDHM-DSTCMTDELPENWCSNTVETSQQSKQVDLTGVRVGVPAEYFVKELPEEILSVWNNGVAWLRGAGAQVVSVSLPTTKLCIPAYYILACAEASSNLSRYDGVRYGYRAKDIALETQEDQSDA-------------LHDLYCRTRSEGFGEEVKRRILSGTFVLSAGAMSDYYERGVILRQRIRQDFQRVFEEQGVDVLLTPTTPSGPFPVQNKQAKEDPVSMYLNDVMTVPANMAGVPAIS-----IPAALTRDSDYPLGLQLMGGRKTEERLLQVANALEQRASFGDLVPARVYATER 546
The following BLAST results are available for this feature:
BLAST of NO14G01670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24666.11.500e-19262.29amidotransferase a subunit for asp-trna glu-trna [... [more]
OQR84922.11.600e-11949.17glutamyl-tRNA(Gln) amidotransferase subunit [Achly... [more]
XP_009824686.13.600e-11447.21aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
XP_008863759.11.400e-11348.03aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
XP_008607039.12.000e-11248.24hypothetical protein SDRG_03193 [Saprolegnia dicli... [more]
XP_009538553.13.300e-11246.14hypothetical protein PHYSODRAFT_566222 [Phytophtho... [more]
XP_009824684.15.300e-11048.71aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
XP_012195396.19.100e-11048.42hypothetical protein SPRG_01639 [Saprolegnia paras... [more]
ETI38317.18.500e-10845.22aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]
XP_008895519.18.500e-10845.22aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002366NSK002366Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G01670.1NO14G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590171gene_5737Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100055g13gene5836Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G01670.1NO14G01670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G01670 ID=NO14G01670|Name=NO14G01670|organism=Nannochloropsis oceanica|type=gene|length=1776bp
ATGCGGCCGACGCGCTTAGTCCTTTGTGGGCCCTCGACGAGCAGAAGGAG
ACCCGGGCACTGGCTCCCACGTCGTCCTCCTGCCGCAACGACCACAACAA
TAGATCTCTGCTCCATTTCCTCTCGACCTCCCCGCACCTACGCCTGCCAG
CCCTTTCCATTGCCTCCCTCCGTGGTCGAGGCCGCGGCGGCCATCCAGCA
GGGTGAGCAGACACCCACCCAGATCCTGCAGCAATGCCTGCAGCGCCAGC
GAGAGATTGCAGGCCTCAACGCCTTTGTCACCACGATGGAAACAGCAGCC
CTGGCGCAGGCAGCAGCGGCGTCGCAGAGTACAGCAGGAGGGCGGCCGCT
GCACGGGATTCCTATCGCGGTTAAGGACAATTTCTGTACAGCAGGTGTAC
GGACGACAGCCTCGTCCAGAATGCTGGCAGATTTCGTCCCTCCGTACTCG
GCTACTGCCGTGGCACGTCTCGAGGCGGCTGGGGCAGTGGTGGTGGGCAA
GACCAACATGGATGAATTTGGCATGGGCTCAGCCACGCTCTTTTCTCACT
TTGGTGAGACTGTCAGTCCATGGTCACCATCACCCTCATCATCCTCATCA
CCCTCGTCGTCAGCATACTGTGGTGGTCTCCGACTCACAGCTGGGGGCAG
CTCGGGAGGGAGTGCCGTAGCAGTAGCGACGGGTGCGTGTCTGGCGGCCT
TGGGATCGGACACGGGAGGCTCTATACGCCAACCCGCGGCCCTGTGCGGG
CTTGTGGGGCTCAAGCCCAGCTACGGACGCATATCACGCCATGGACTCAT
CGCCTATGCCTCTTCCTTGGACTGCCCTGGCCTGCTGACGCGGACGGTGG
CTGATGCAGCCTTGGTGCTGGACGCGGTAGCGGGACCTGACCCGCTGGGA
GACTCTTCCTGCTGGGACGGGCCGCACCAGTTGTGCTTCACCGAGGCCTT
GCAGACAGCTGGCCTGAACTTTTCACTTCGCGGCCTGAAGGTGGGGCTGG
CCGCGGAATTTGGGGTCCGGGAGCTGGAGGCCAGCACGGTGACAGCATGG
GAGGAAGGGGCGCGACTGCTGCAGGATGCAGGTGCCGAGGTGATGCCTGT
GTCCGTACCCTCTATCCCCCTGGCTCTCCCGGCTTACTTTGTCATTGCCT
GTGCCGAGGCATCCTCAAACCTAGCGCGCTACGACGGCATTCGGTACGGC
CATCGCGCTTCGAGTGCTTGGGCAGACAGTCAGGGAGACAGCAGCAGCAG
TGCGACTGAGAGCGAGAGAGAGGCGAAGGACCAAGGCATGCTGCATAATT
TCATTACTGTCTCCCGCTCCGAAGGTTTCGGGCCCGAGGTCCAGCGCCGC
ATCCTCGCCGGCTGCCGAGTCCTATCGGCTCGCACCTACTCGGCCTACTA
TGAAAAGGCGCTGGCAGCCCGTGTCCGCATCCGTCAGGATATGGCCCAGG
CGATGAGCCAGGTGGACGTCATCCTTACCCCCGTCACGCCCTCGGGCCCC
TTCCCCCTCACCACCCCAGCCGAGCCGGCGGCCCTGATGCTCAACGACAT
CATGACTGTCCCGGCCAGCCTAGCTGGGCTGCCGGCCGTCTCGGTGCCCA
TATCCGTGGTGCCTTCATCCTTCGCAGCCGACGTACCCGTGCCTTTGGGT
TTGCAGCTGATAGGACGTCCCTTCAGGGAGCGGGAGTTGCTGTACGTGGC
GCAGGCTTTGGAGGCCCGGTGTGATTTTGCAAAGCAGATTCCCAAGTATG
TGCTCAAGGGCAGGCGCACGATATGA
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protein sequence of NO14G01670.1

>NO14G01670.1-protein ID=NO14G01670.1-protein|Name=NO14G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=592bp
MRPTRLVLCGPSTSRRRPGHWLPRRPPAATTTTIDLCSISSRPPRTYACQ
PFPLPPSVVEAAAAIQQGEQTPTQILQQCLQRQREIAGLNAFVTTMETAA
LAQAAAASQSTAGGRPLHGIPIAVKDNFCTAGVRTTASSRMLADFVPPYS
ATAVARLEAAGAVVVGKTNMDEFGMGSATLFSHFGETVSPWSPSPSSSSS
PSSSAYCGGLRLTAGGSSGGSAVAVATGACLAALGSDTGGSIRQPAALCG
LVGLKPSYGRISRHGLIAYASSLDCPGLLTRTVADAALVLDAVAGPDPLG
DSSCWDGPHQLCFTEALQTAGLNFSLRGLKVGLAAEFGVRELEASTVTAW
EEGARLLQDAGAEVMPVSVPSIPLALPAYFVIACAEASSNLARYDGIRYG
HRASSAWADSQGDSSSSATESEREAKDQGMLHNFITVSRSEGFGPEVQRR
ILAGCRVLSARTYSAYYEKALAARVRIRQDMAQAMSQVDVILTPVTPSGP
FPLTTPAEPAALMLNDIMTVPASLAGLPAVSVPISVVPSSFAADVPVPLG
LQLIGRPFRERELLYVAQALEARCDFAKQIPKYVLKGRRTI*
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Synonyms
Publications