NO14G01050, NO14G01050 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO14G01050
Unique Name	NO14G01050
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2556
Alignment location	chr14:350596..353151 -

Link to JBrowse

Properties


Property Name	Value
Description	3-ketoacyl-thiolase peroxisomal

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr14	genome	chr14:350596..353151 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups
GO:0016740	transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR016039	Thiolase-like
IPR020616	Thiolase_N
IPR020617	Thiolase_C

Homology

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: EWM24705.1 (3-ketoacyl- thiolase peroxisomal [Nannochloropsis gaditana])

HSP 1 Score: 606.7 bits (1563), Expect = 5.600e-170
Identity = 319/420 (75.95%), Postives = 352/420 (83.81%), Query Frame = 0

Query:    1 MTGAQTNPANRRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITV-----EGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFENE 416
            M+  QT+ AN+RLE L  HL KK + PGF  GDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVL AVVKQSG+D+A+LGDIV+GNVLQ G+GAVGARMAQFYAGIPY+VPLCT+NRQCSSGLQAF QVAA IQSGLY   IAGGVESMSLTDM++SVP++NF+RV E   SKDC IPMGQTSDEVA+RF+V+RE+QD FAAASHAKAEAA K+GKFAEEIVP+ V     +GGE E  VV+EDEGIRPGTT EKLG LRSSF+EG                         A   G+PV+GVLRGAAVVGVPPDIMG+GPAVAIPAALA+A L VE+VDV+EINEAFASQCLYCVREL IP+EKVNPNGGAIALGHPLGATGARQIATLLHEMRRT KR+GVVSMCIGTGMGAAAVFENE
Sbjct:    1 MSSTQTSQANKRLEHLSGHLVKKTSRPGFLGGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLEAVVKQSGVDAATLGDIVVGNVLQPGSGAVGARMAQFYAGIPYQVPLCTLNRQCSSGLQAFLQVAASIQSGLYEAGIAGGVESMSLTDMSTSVPDVNFERVSENALSKDCTIPMGQTSDEVATRFQVSREDQDRFAAASHAKAEAAVKAGKFAEEIVPVRVSSGGEDGGEDEVTVVREDEGIRPGTTPEKLGGLRSSFSEGGSTTAGNSSQMTDGAAAVLVMSRGAATAQGMPVMGVLRGAAVVGVPPDIMGIGPAVAIPAALAQARLRVEDVDVFEINEAFASQCLYCVRELKIPMEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTRKRWGVVSMCIGTGMGAAAVFENE 420

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: XP_005854303.1 (beta-ketoacyl-CoA thiolase [Nannochloropsis gaditana CCMP526] >EKU22055.1 beta-ketoacyl-CoA thiolase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 605.5 bits (1560), Expect = 1.200e-169
Identity = 319/420 (75.95%), Postives = 352/420 (83.81%), Query Frame = 0

Query:    1 MTGAQTNPANRRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITV-----EGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFENE 416
            M+  QT+ AN+RLE LG HL KK + PGF  GDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVL AVVKQSG+D+A+LGDIV+GNVLQ G+GAVGARMAQFYAGIPY+VPLCT+NRQCSSGLQAF QVAA IQSGLY   IAGGVESMSLTDM++SVP++NF+RV E   SKDC IPMGQTSDEVA+RF+V+RE+QD FAAASHAKAEAA K+GKFAEEIVP+ V     +GGE E  VV+EDEGIRPGTT EKLG LRSSF+EG                         A   G+ V+GVLRGAAVVGVPPDIMG+GPAVAIPAALA+A L VE+VDV+EINEAFASQCLYCVREL IP+EKVNPNGGAIALGHPLGATGARQIATLLHEMRRT KR+GVVSMCIGTGMGAAAVFENE
Sbjct:    1 MSSTQTSQANKRLEHLGGHLVKKTSRPGFLGGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLEAVVKQSGVDAATLGDIVVGNVLQPGSGAVGARMAQFYAGIPYQVPLCTLNRQCSSGLQAFLQVAASIQSGLYEAGIAGGVESMSLTDMSTSVPDVNFERVSENALSKDCTIPMGQTSDEVATRFQVSREDQDRFAAASHAKAEAAVKAGKFAEEIVPVRVSSGGEDGGEDEVTVVREDEGIRPGTTPEKLGGLRSSFSEGGSTTAGNSSQMTDGAAAVLVMSRGAATAQGMHVMGVLRGAAVVGVPPDIMGIGPAVAIPAALAQARLRVEDVDVFEINEAFASQCLYCVRELKIPMEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTRKRWGVVSMCIGTGMGAAAVFENE 420

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: XP_005852686.1 (3-ketoacyl- thiolase peroxisomal, partial [Nannochloropsis gaditana CCMP526] >EKU23146.1 3-ketoacyl- thiolase peroxisomal, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 553.1 bits (1424), Expect = 7.300e-154
Identity = 292/392 (74.49%), Postives = 325/392 (82.91%), Query Frame = 0

Query:    1 MTGAQTNPANRRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITV-----EGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHE 388
            M+  QT+ AN+RLE LG HL KK + PGF  GDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVL AVVKQSG+D+A+LGDIV+GNVLQ G+GAVGARMAQFYAGIPY+VPLCT+NRQCSSGLQAF QVAA IQSGLY   IAGGVESMSLTDM++SVP++NF+RV E   SKDC IPMGQTSDEVA+RF+V+RE+QD FAAASHAKAEAA K+GKFAEEIVP+ V     +GGE E  VV+EDEGIRPGTT EKLG LRSSF+EG                         A   G+ V+GVLRGAAVVGVPPDIMG+GPAVAIPAALA+A L VE+VDV+EINEAFASQCLYCVREL IP+EKVNPNGGAIA+GHPLGATGARQIATLLHE
Sbjct:    1 MSSTQTSQANKRLEHLGGHLVKKTSRPGFLGGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLEAVVKQSGVDAATLGDIVVGNVLQPGSGAVGARMAQFYAGIPYQVPLCTLNRQCSSGLQAFLQVAASIQSGLYEAGIAGGVESMSLTDMSTSVPDVNFERVSENALSKDCTIPMGQTSDEVATRFQVSREDQDRFAAASHAKAEAAVKAGKFAEEIVPVRVSSGGEDGGEDEVTVVREDEGIRPGTTPEKLGGLRSSFSEGGSTTAGNSSQMTDGAAAVLVMSRGAATAQGMHVMGVLRGAAVVGVPPDIMGIGPAVAIPAALAQARLRVEDVDVFEINEAFASQCLYCVRELKIPMEKVNPNGGAIAIGHPLGATGARQIATLLHE 392

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: XP_012198798.1 (hypothetical protein SPRG_04484 [Saprolegnia parasitica CBS 223.65] >KDO30583.1 hypothetical protein SPRG_04484 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 436.0 bits (1120), Expect = 1.300e-118
Identity = 234/404 (57.92%), Postives = 286/404 (70.79%), Query Frame = 0

Query:   11 RRLERLGSHL-TKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITVEGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFE 414
            +RL R+  HL T  PT       +VVVV+A RTP+ KAKRGAFK TT D LL  V   V+KQ+ +D   +GDIV+GNVLQ G+ AVGARM Q  AGIPY VPL +VNRQCSSGLQAF  VAA IQ+G Y   +A GVESMSLTDM  S P++ ++ V   + +K C + MG TS+ VA+++ +TR +QD  AAASHAKA AAQ +G+F  EI P+ ++  +G+ VV+ +DEG+R GTT E L KLR+SF E                          A +  LP+LG     AV GVPP+IMGVGPA AIPAALA+AGL +E++DV+EINEAFASQ LYC+ EL IP+EKVNPNGGAIALGHPLG TGARQIATLLHE++RT K YGV+SMCIGTGMGAAAVF+
Sbjct:    2 QRLNRIQGHLQTPSPT-------EVVVVAATRTPIAKAKRGAFKDTTPDVLLRQVFEGVLKQTKVDPKIIGDIVVGNVLQPGSAAVGARMGQLCAGIPYTVPLNSVNRQCSSGLQAFANVAAAIQAGFYDVGLAAGVESMSLTDMGGSAPDVAWEDVYANEGAKSCTVSMGLTSENVAAKYGITRTQQDTLAAASHAKAAAAQAAGRFDAEITPVVLKTDDGKEVVISKDEGVRAGTTVEGLAKLRTSFKENGTTTAGNSSQVSDGAAAVLVMTRAMAEKLQLPILGTFVSYAVSGVPPEIMGVGPAYAIPAALAKAGLRIEDIDVFEINEAFASQALYCINELKIPMEKVNPNGGAIALGHPLGCTGARQIATLLHELQRTQKTYGVISMCIGTGMGAAAVFK 398

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: XP_008616222.1 (acetyl-CoA acyltransferase 1 [Saprolegnia diclina VS20] >EQC30369.1 acetyl-CoA acyltransferase 1 [Saprolegnia diclina VS20])

HSP 1 Score: 432.2 bits (1110), Expect = 1.900e-117
Identity = 232/404 (57.43%), Postives = 285/404 (70.54%), Query Frame = 0

Query:   11 RRLERLGSHL-TKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITVEGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFE 414
            +RL R+  HL T  PT       +VVVV+A RTP+ KAKRGAFK TT D LL  V   V+KQ+ +D   +GDIV+GNVLQ G+ AVGARM Q  AGIPY VPL +VNRQCSSGLQAF  VAA IQ+G Y   +A GVE MSLTDM  S P++ ++ V   + +K+C + MG TS+ VA+++ +TR +QD  AAASHAKA AAQ +G+F  EI P+ ++  +G+ VV+ +DEG+R GTT E L KLR+SF E                          A +  LP+LG     AV GVPP+IMGVGPA AIPAALA+A L +E++DV+EINEAFASQ LYC+ EL IP+EKVNPNGGAIALGHPLG TGARQIATLLHE++RT K YGV+SMCIGTGMGAAAVF+
Sbjct:    2 QRLNRIQGHLQTPSPT-------EVVVVAATRTPIAKAKRGAFKDTTPDVLLRQVFEGVLKQTKVDPKIIGDIVVGNVLQPGSAAVGARMGQLCAGIPYTVPLNSVNRQCSSGLQAFANVAAAIQAGYYDVGLAAGVECMSLTDMGGSAPDVAWEDVYANEGAKNCTVSMGLTSENVAAKYGITRTQQDTLAAASHAKAAAAQAAGRFDAEITPVVLKTDDGKEVVISKDEGVRAGTTVEGLAKLRTSFKENGTTTAGNSSQVSDGAAAVLVMTRAMAEKLQLPILGTFVSYAVAGVPPEIMGVGPAYAIPAALAKADLRIEDIDVFEINEAFASQALYCIHELKIPMEKVNPNGGAIALGHPLGCTGARQIATLLHELQRTQKTYGVISMCIGTGMGAAAVFK 398

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: OQR95928.1 (3-ketoacyl-CoA thiolase A [Thraustotheca clavata])

HSP 1 Score: 429.9 bits (1104), Expect = 9.300e-117
Identity = 229/408 (56.13%), Postives = 290/408 (71.08%), Query Frame = 0

Query:    8 PANRRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITVEGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFENE 416
            P  +R+ER+  H+   P  P     +VV+V+A RTP+ KAKRGAFK TT D LL  V   ++ Q+ ID   +GDIV+GNVLQ G+ AVGARM Q  AGIPY VPL +VNRQCSSGLQAF  VAAGI++G Y   IA GVESMSLTDMASS PE+ ++ V   + +K+C + MG TS+ VA+++ +TR +QD  AA SHAKA AAQ++G F  EI P+ ++  +G+ VVV +DEGIRPGT+ + L KLR+SF E                          A +  LP+LG     +VVGVPP+IMGVGPA+AIP ALA+AGL++ ++D++EINEAFASQ L+C+  L IP EKVNP GGAIALGHPLG TGARQIATLL+E++RT K+YGVVSMCIGTGMGAAA+F+ E
Sbjct:  434 PTMQRIERIQGHM-HAPAAP----VEVVIVAATRTPIAKAKRGAFKDTTPDVLLRHVFEGIINQTKIDPKIIGDIVVGNVLQPGSAAVGARMGQLCAGIPYSVPLNSVNRQCSSGLQAFANVAAGIRAGYYDVGIAAGVESMSLTDMASSAPEVAWEDVYANEAAKNCTVSMGLTSENVAAKYGITRTQQDTMAAESHAKAAAAQQNGLFKGEITPVILKTDDGKEVVVSQDEGIRPGTSVQGLAKLRASFKENGTTTAGNSSQVSDGAAACLVMTRAMAEKLQLPILGSFVSYSVVGVPPEIMGVGPALAIPDALAKAGLTINDIDIFEINEAFASQALFCIDHLKIPKEKVNPKGGAIALGHPLGCTGARQIATLLYELKRTNKQYGVVSMCIGTGMGAAAIFKRE 836

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: OQR92766.1 (3-ketoacyl-CoA thiolase A [Achlya hypogyna])

HSP 1 Score: 420.6 bits (1080), Expect = 5.700e-114
Identity = 227/408 (55.64%), Postives = 282/408 (69.12%), Query Frame = 0

Query:   11 RRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITVEGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGV-----GPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFE 414
            +R+ER+  H+  +P        +VVVV+A RTP+ KAKRGAFK TT D LL  V   ++ Q+ ID   +GDIV+GNVLQ G+ AVGARM Q  AGIPY VPL +VNRQCSSGLQAF  VA+ IQ+G Y   IA GVESMSLTDM SS P++N++ V   + + +C + MG TS+ VA+++ +TR +QD  AA SHAKA  AQ  G FA EI P+ ++  +GE VV+ +DEG+RPGTT E L KLR+SF E                          A +  LP+LG     AV GVPP+IMG+     GPA AIP ALA+AGL+++++DV+EINEAFASQ LYC+  L IP  KVNPNGGAIALGHPLG TGARQIATLLHE++RT K YGV+SMCIGTGMGAAAVF+
Sbjct:    2 QRIERIQGHM--RPAA----QVEVVVVAATRTPIAKAKRGAFKDTTPDVLLRQVFEGILNQTKIDPKIIGDIVVGNVLQPGSAAVGARMGQLCAGIPYSVPLNSVNRQCSSGLQAFANVASAIQAGYYDVGIAAGVESMSLTDMGSSAPDVNWEDVYANEGATNCTVSMGLTSENVAAKYGITRAQQDAMAAESHAKAATAQAKGYFAAEITPVVLKTDDGETVVISQDEGVRPGTTVEGLAKLRASFKENGTTTAGNSSQVSDGAAACLVMTRAMAEKLQLPILGSFVSYAVAGVPPEIMGIANDGEGPAYAIPEALAKAGLAIDDIDVFEINEAFASQALYCIDTLKIPKHKVNPNGGAIALGHPLGCTGARQIATLLHELQRTQKTYGVISMCIGTGMGAAAVFK 403

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BLAST of NO14G01050 vs. NCBI_GenBank
Match: NP_001072686.1 (3-ketoacyl-CoA thiolase, peroxisomal [Xenopus tropicalis] >AAI24020.1 acetyl-Coenzyme A acyltransferase 1 [Xenopus tropicalis] >ATO96903.1 acetyl-CoA acyltransferase 1, partial [synthetic construct])

HSP 1 Score: 415.6 bits (1067), Expect = 1.800e-112
Identity = 223/390 (57.18%), Postives = 275/390 (70.51%), Query Frame = 0

Query:   33 DVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITV----EGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKR-YGVVSMCIGTGMGAAAVFENEGY 418
            D+V+V+  RTP+CKAKRG FK TT D+LL+ V+ AV+    ++   LGDI +GNVLQ GAGA+ AR+ QF +GIP  VPL  VNRQCSSGLQA   +A GI++G Y   +A GVESMSL  + +  P     R  +F  ++DC+IPMG TS+ VA RF +TRE+QD  A AS  +A AAQ+SG+F EEIVPIT     + G  + + V EDEGIR  TT E LG+L+++F EG                         A + GLP+LGVLR  AVVGVPPD+MG+GPA AIPAAL +AGLSV ++DVYEINEAFASQ  YCV +LGIP+EKVNPNGGAIALGHPLG TGARQ  TLL+E++R GKR +GVVSMCIGTGMGAAAV+E  G+
Sbjct:   32 DIVIVAGRRTPICKAKRGGFKETTPDELLSAVMTAVLNDVNLNPELLGDICVGNVLQPGAGALVARIGQFLSGIPESVPLHVVNRQCSSGLQAIINIAGGIRNGSYDVGLACGVESMSLRSVGN--PGDISSRTMDFSKARDCLIPMGITSENVAERFGITREKQDSLALASQQRAAAAQRSGRFKEEIVPITTTFTDDQGNTKTITVTEDEGIRASTTMEGLGRLKAAFKEGGSTTAGNSSQVSDGAAAVLMAKRCKAEQLGLPILGVLRSFAVVGVPPDVMGIGPAYAIPAALQKAGLSVHDIDVYEINEAFASQAAYCVEKLGIPLEKVNPNGGAIALGHPLGCTGARQTVTLLNELKRRGKRGFGVVSMCIGTGMGAAAVYEYPGH 419

[Close]

BLAST of NO14G01050 vs. NCBI_GenBank
Match: OCA19835.1 (hypothetical protein XENTR_v90027452mg [Xenopus tropicalis])

HSP 1 Score: 415.6 bits (1067), Expect = 1.800e-112
Identity = 223/390 (57.18%), Postives = 275/390 (70.51%), Query Frame = 0

Query:   33 DVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITV----EGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKR-YGVVSMCIGTGMGAAAVFENEGY 418
            D+V+V+  RTP+CKAKRG FK TT D+LL+ V+ AV+    ++   LGDI +GNVLQ GAGA+ AR+ QF +GIP  VPL  VNRQCSSGLQA   +A GI++G Y   +A GVESMSL  + +  P     R  +F  ++DC+IPMG TS+ VA RF +TRE+QD  A AS  +A AAQ+SG+F EEIVPIT     + G  + + V EDEGIR  TT E LG+L+++F EG                         A + GLP+LGVLR  AVVGVPPD+MG+GPA AIPAAL +AGLSV ++DVYEINEAFASQ  YCV +LGIP+EKVNPNGGAIALGHPLG TGARQ  TLL+E++R GKR +GVVSMCIGTGMGAAAV+E  G+
Sbjct:   60 DIVIVAGRRTPICKAKRGGFKETTPDELLSAVMTAVLNDVNLNPELLGDICVGNVLQPGAGALVARIGQFLSGIPESVPLHVVNRQCSSGLQAIINIAGGIRNGSYDVGLACGVESMSLRSVGN--PGDISSRTMDFSKARDCLIPMGITSENVAERFGITREKQDSLALASQQRAAAAQRSGRFKEEIVPITTTFTDDQGNTKTITVTEDEGIRASTTMEGLGRLKAAFKEGGSTTAGNSSQVSDGAAAVLMAKRCKAEQLGLPILGVLRSFAVVGVPPDVMGIGPAYAIPAALQKAGLSVHDIDVYEINEAFASQAAYCVEKLGIPLEKVNPNGGAIALGHPLGCTGARQTVTLLNELKRRGKRGFGVVSMCIGTGMGAAAVYEYPGH 447

[Close]

BLAST of NO14G01050 vs. NCBI_GenBank
Match: ETI53494.1 (hypothetical protein F443_03599 [Phytophthora parasitica P1569] >ETM53008.1 hypothetical protein L914_03467 [Phytophthora parasitica])

HSP 1 Score: 415.2 bits (1066), Expect = 2.400e-112
Identity = 218/408 (53.43%), Postives = 281/408 (68.87%), Query Frame = 0

Query:   12 RLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITV----EGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGXXXXXXXXXXXXXXXXXXXXXXXXXAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFENE 416
            R+ R+ SH+      P   + DVV+VSALRTP+ KA+RG FK TT D LL+ VL AV+KQ+ +D   +GDIV+GNVLQ GAGA  ARMAQ  AGIP+ VPL  +NRQCSSGLQA   V A I++G Y   IA GVE MSL+ +    P +N++RV + +++ DC +PMG TS+ VA ++ ++R +QD  AA SHAKA AAQ +G F EEI P++     + G  + V++ +D+G+R GTT EKL KLR +F EG                         A + GLP+LG     AV GVPP +MG+GPA AIP AL +AGL  +++DV+EINEAFASQ  YCV +LGIP+EKVNP GGAIALGHPLG TGARQ++TLL++++R  +RYGV+SMCIGTGMGAAAVFE E
Sbjct:    3 RINRIRSHVANGSPAPVTPEEDVVIVSALRTPITKARRGGFKDTTPDVLLSHVLQAVLKQAKVDPKLVGDIVVGNVLQPGAGAGMARMAQLAAGIPHTVPLHVINRQCSSGLQAVANVTAAIKAGYYDIGIAAGVECMSLSGIGKDPPTVNWERVGQVQDAMDCTVPMGITSENVAEKYGISRTKQDELAALSHAKAAAAQANGWFKEEITPVSTVIKDKDGNEKSVIISQDDGVRAGTTVEKLAKLRPAFKEGGSTTAGNSSQVSDGAAAVLLMRRSVAKQMGLPILGRFVSYAVAGVPPALMGIGPAYAIPEALQKAGLRQDQIDVFEINEAFASQATYCVEKLGIPIEKVNPKGGAIALGHPLGCTGARQMSTLLYQLKRKNQRYGVISMCIGTGMGAAAVFERE 410

The following BLAST results are available for this feature:

BLAST of NO14G01050 vs. NCBI_GenBank

BLAST of NO14G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM24705.1	5.600e-170	75.95	3-ketoacyl- thiolase peroxisomal [Nannochloropsis ...	[more]
XP_005854303.1	1.200e-169	75.95	beta-ketoacyl-CoA thiolase [Nannochloropsis gadita...	[more]
XP_005852686.1	7.300e-154	74.49	3-ketoacyl- thiolase peroxisomal, partial [Nannoch...	[more]
XP_012198798.1	1.300e-118	57.92	hypothetical protein SPRG_04484 [Saprolegnia paras...	[more]
XP_008616222.1	1.900e-117	57.43	acetyl-CoA acyltransferase 1 [Saprolegnia diclina ...	[more]
OQR95928.1	9.300e-117	56.13	3-ketoacyl-CoA thiolase A [Thraustotheca clavata]	[more]
OQR92766.1	5.700e-114	55.64	3-ketoacyl-CoA thiolase A [Achlya hypogyna]	[more]
NP_001072686.1	1.800e-112	57.18	3-ketoacyl-CoA thiolase, peroxisomal [Xenopus trop...	[more]
OCA19835.1	1.800e-112	57.18	hypothetical protein XENTR_v90027452mg [Xenopus tr...	[more]
ETI53494.1	2.400e-112	53.43	hypothetical protein F443_03599 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL138	nonsL138	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR069	ncniR069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR024	ngnoR024	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR023	ngnoR023	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK002301	NSK002301	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO14G01050.1	NO14G01050.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|589937	gene_5671	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100076g17	gene5780	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO14G01050.1	NO14G01050.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO14G01050 ID=NO14G01050|Name=NO14G01050|organism=Nannochloropsis oceanica|type=gene|length=2556bp
TGCTTTTTGGTCAAGACACTTTACGACGAGCCTCCAAATACACGTGGACT
GTTTGAGAAACTTAATACATTCTTCTCCCTTCTCGCAATAAATGAAATCA
TATCTGGTGAATTGTCAGGTGTGGTGCAAGGCTAGTGAGGAAATTGAGTC
TCGAGCAAGGAAGTAGCCGTTCCCACTTCGCTCCTTCGACAAGAACAAGC
TCCTTCATCCATTGCACGTCCTTTTTCCACACCAGAGACACATTCAGGCC
ACATGTACCAGGTCCTTTTTGTCTTTAATACCCATATTCTAACAGTCCCT
AAAACCTTTATCCTTTCACACGCATATAGGCAAGCAAGCCAAGGACCGTC
TCCCTCTATCCGAGCATCAAATCAGGCAGAGTCCTTCTTCCACAGGCTCA
CCAAAAGAACCAACAACAATGACCGGCGCTCAAACCAACCCTGCCAATCG
CCGCCTGGAGCGTCTCGGAAGCCATCTGACGAAGAAGgtatgtatgaaaa
tgccggcggaaggagggtttggcggtagggttgagggagggagtgttgat
gcaggaaaggcacacaacttcaatgcgcatgacttcgtcagggataccct
aagcttgtaagactctggatacatctggaagatgtgtgacttttgaatga
tgtgtacataagtcattttgctggcctgttcggcttcttgagagagacct
gccatgccaaagcgtaagtgcttggttcccagttttccactccatcatcc
ttcaactcaaccaccctccctccgatccccctctacgcatcctaccccca
cctagCCTACCGGTCCCGGCTTTCGCGACGGTGATGTCGTGGTTGTCTCT
GCTCTCCGCACACCCCTTTGCAAGGCTAAACGCGGTGCCTTCAAAAGCAC
CACTACTGACGACTTGCTTGCTCCCGTCTTGGCTGCCGTGGTGAAGCAAT
CGGGCATCGACTCTGCTTCCCTCGGAGACATTGTCATTGGTAACGTCTTG
CAGGCGGGTGCTGGGGCTGTTGGAGCAAGGATGGCTCAGTTCTATGCTGG
AATCCCTTATGAGgtgaggaaggatgaagggagggtgggagggaggaggg
aagaaggcagatgggggttatcaagcgtgaacatggtaatgtaatctact
tcctgaatacttagccgtcgctccctattatcgtcccttcccagGTACCT
CTCTGCACCGTGAACCGCCAGTGCTCCTCCGGCCTGCAAGCTTTTTTCCA
AGTCGCCGCCGGCATTCAATCCGGGCTCTACTCCACCGCCATCGCTGGCG
GGGTGGAATCAATGTCCCTCACCGACATGGCATCCTCTGTCCCCGAAATC
AATTTCGACCGGGTCCAGGAATTCAAAAATTCAAAAGACTGCATCATCCC
TATGGGCCAGACAAGCGATGAGGTTGCGTCAAGGTTCAGGGTCACGAGGG
AGGAACAGGACATATTCGCTGCTGCCTCGCACGCCAAGGCAGAGGCGGCG
CAGAAGAGTGGGAAATTTGCGGAGGAGATCGTGCCGATTACAGTGGAGGG
GGGAGAGGGGGAAGGAGTAGTTGTGAAGGAGGACGAGGGGATTCGCCCGG
GGACAACAGCGGAGAAATTGGGAAAATTGAGGTCAAGTTTCACGGAGGGG
GGCTCGACTACGGCAGGGAACAGTAGTCAGATGACTGACGGAGCGGCGGC
GGTGGTGGTAGCGAGTAGGGGCGCAGCAGCAGAGCATGGCTTGCCGGTGT
TGGGCGTCTTGAGGGGGGCGGCGGTTGTAGGTGTGCCTCCGGACATTATG
GGAGTGGGGCCTGCGGTTGCTATTCCTGCGGCGTTAGCACGTGCGGGGTT
GAGCGTCGAGGAGGTGGATGTGTACGAGATTAACGAGGCGTTTGCGAGCC
AGTGCTTGTATTGTGTGCGGGAGTTGGGGATTCCAGTAGAGAAGGTCAAC
CCGAATGGGGGGGCCATTGCGCTTGGTCATCCGTTGGGGGCCACGGGGGC
GAGGCAGATTGCGACGTTGCTGCATGAGATGAGGAGGACGGGAAAGAGGT
ATGGAGTGGTGAGCATGTGCATTGGCACGGGCATGGGGGCGGCGGCCGTG
TTTGAGAATGAGGGTTATAAGGTGCGGAAGTAGAGGAGAGGGGGGGTTGA
AAGGTTGTATGCATGCACAACGTTGCTGGGGGGGAAGGTGATAGAGAAAG
GAGGAGCCTTAGACAATGCTGCTGGAGATGGGCAGGGGACAAGTTGAGAT
GAGGGGGGAAAGCATCTAAACCGTAGGTAGGGTATCTTTGCTGCTGCGGC
TGTTGCTGCTAGTGCTGCAGCTGATGGTGATGCAGATGCTGGTGAGCTTG
CAGATGCAGATGCAGATGCTGCTGCATGTACACATGTCACAGGAAAAGTT
GTTTGTGGCACTCGAAAATAAAAAAGCTATATAAACGTTAAAAGAGGAGG
GCGGACAAGAAGAAGTTAAGACATCGATGAGAGCGAGGAGAGAAGATAGA
AAATTTGTCGCACAAATACGCATAGAGAAAGACGAGTCATAGGACAAATC
AAACTG

protein sequence of NO14G01050.1

>NO14G01050.1-protein ID=NO14G01050.1-protein|Name=NO14G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bp
MTGAQTNPANRRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRG
AFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMA
QFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMS
LTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIF
AAASHAKAEAAQKSGKFAEEIVPITVEGGEGEGVVVKEDEGIRPGTTAEK
LGKLRSSFTEGGSTTAGNSSQMTDGAAAVVVASRGAAAEHGLPVLGVLRG
AAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCV
RELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSM
CIGTGMGAAAVFENEGYKVRK*

Synonyms

Publications