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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:350596..353151 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G01050.1 vs.
Match: EWM24705.1 (3-ketoacyl- thiolase peroxisomal [Nannochloropsis gaditana]) HSP 1 Score: 651.4 bits (1679), Expect = 2.000e-183 Identity = 342/420 (81.43%), Postives = 376/420 (89.52%), Query Frame = 0
Query: 1 MTGAQTNPANRRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMAQFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMSLTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIFAAASHAKAEAAQKSGKFAEEIVPITV-----EGGEGEGVVVKEDEGIRPGTTAEKLGKLRSSFTEGGSTTAGNSSQMTDGAAAVVVASRGAAAEHGLPVLGVLRGAAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCVRELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSMCIGTGMGAAAVFENE 416
M+ QT+ AN+RLE L HL KK + PGF GDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVL AVVKQSG+D+A+LGDIV+GNVLQ G+GAVGARMAQFYAGIPY+VPLCT+NRQCSSGLQAF QVAA IQSGLY IAGGVESMSLTDM++SVP++NF+RV E SKDC IPMGQTSDEVA+RF+V+RE+QD FAAASHAKAEAA K+GKFAEEIVP+ V +GGE E VV+EDEGIRPGTT EKLG LRSSF+EGGSTTAGNSSQMTDGAAAV+V SRGAA G+PV+GVLRGAAVVGVPPDIMG+GPAVAIPAALA+A L VE+VDV+EINEAFASQCLYCVREL IP+EKVNPNGGAIALGHPLGATGARQIATLLHEMRRT KR+GVVSMCIGTGMGAAAVFENE
Sbjct: 1 MSSTQTSQANKRLEHLSGHLVKKTSRPGFLGGDVVVVSALRTPLCKAKRGAFKSTTTDDLLAPVLEAVVKQSGVDAATLGDIVVGNVLQPGSGAVGARMAQFYAGIPYQVPLCTLNRQCSSGLQAFLQVAASIQSGLYEAGIAGGVESMSLTDMSTSVPDVNFERVSENALSKDCTIPMGQTSDEVATRFQVSREDQDRFAAASHAKAEAAVKAGKFAEEIVPVRVSSGGEDGGEDEVTVVREDEGIRPGTTPEKLGGLRSSFSEGGSTTAGNSSQMTDGAAAVLVMSRGAATAQGMPVMGVLRGAAVVGVPPDIMGIGPAVAIPAALAQARLRVEDVDVFEINEAFASQCLYCVRELKIPMEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTRKRWGVVSMCIGTGMGAAAVFENE 420
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G01050.1 ID=NO14G01050.1|Name=NO14G01050.1|organism=Nannochloropsis oceanica|type=mRNA|length=2107bp TGCTTTTTGGTCAAGACACTTTACGACGAGCCTCCAAATACACGTGGACT GTTTGAGAAACTTAATACATTCTTCTCCCTTCTCGCAATAAATGAAATCA TATCTGGTGAATTGTCAGGTGTGGTGCAAGGCTAGTGAGGAAATTGAGTC TCGAGCAAGGAAGTAGCCGTTCCCACTTCGCTCCTTCGACAAGAACAAGC TCCTTCATCCATTGCACGTCCTTTTTCCACACCAGAGACACATTCAGGCC ACATGTACCAGGTCCTTTTTGTCTTTAATACCCATATTCTAACAGTCCCT AAAACCTTTATCCTTTCACACGCATATAGGCAAGCAAGCCAAGGACCGTC TCCCTCTATCCGAGCATCAAATCAGGCAGAGTCCTTCTTCCACAGGCTCA CCAAAAGAACCAACAACAATGACCGGCGCTCAAACCAACCCTGCCAATCG CCGCCTGGAGCGTCTCGGAAGCCATCTGACGAAGAAGCCTACCGGTCCCG GCTTTCGCGACGGTGATGTCGTGGTTGTCTCTGCTCTCCGCACACCCCTT TGCAAGGCTAAACGCGGTGCCTTCAAAAGCACCACTACTGACGACTTGCT TGCTCCCGTCTTGGCTGCCGTGGTGAAGCAATCGGGCATCGACTCTGCTT CCCTCGGAGACATTGTCATTGGTAACGTCTTGCAGGCGGGTGCTGGGGCT GTTGGAGCAAGGATGGCTCAGTTCTATGCTGGAATCCCTTATGAGGTACC TCTCTGCACCGTGAACCGCCAGTGCTCCTCCGGCCTGCAAGCTTTTTTCC AAGTCGCCGCCGGCATTCAATCCGGGCTCTACTCCACCGCCATCGCTGGC GGGGTGGAATCAATGTCCCTCACCGACATGGCATCCTCTGTCCCCGAAAT CAATTTCGACCGGGTCCAGGAATTCAAAAATTCAAAAGACTGCATCATCC CTATGGGCCAGACAAGCGATGAGGTTGCGTCAAGGTTCAGGGTCACGAGG GAGGAACAGGACATATTCGCTGCTGCCTCGCACGCCAAGGCAGAGGCGGC GCAGAAGAGTGGGAAATTTGCGGAGGAGATCGTGCCGATTACAGTGGAGG GGGGAGAGGGGGAAGGAGTAGTTGTGAAGGAGGACGAGGGGATTCGCCCG GGGACAACAGCGGAGAAATTGGGAAAATTGAGGTCAAGTTTCACGGAGGG GGGCTCGACTACGGCAGGGAACAGTAGTCAGATGACTGACGGAGCGGCGG CGGTGGTGGTAGCGAGTAGGGGCGCAGCAGCAGAGCATGGCTTGCCGGTG TTGGGCGTCTTGAGGGGGGCGGCGGTTGTAGGTGTGCCTCCGGACATTAT GGGAGTGGGGCCTGCGGTTGCTATTCCTGCGGCGTTAGCACGTGCGGGGT TGAGCGTCGAGGAGGTGGATGTGTACGAGATTAACGAGGCGTTTGCGAGC CAGTGCTTGTATTGTGTGCGGGAGTTGGGGATTCCAGTAGAGAAGGTCAA CCCGAATGGGGGGGCCATTGCGCTTGGTCATCCGTTGGGGGCCACGGGGG CGAGGCAGATTGCGACGTTGCTGCATGAGATGAGGAGGACGGGAAAGAGG TATGGAGTGGTGAGCATGTGCATTGGCACGGGCATGGGGGCGGCGGCCGT GTTTGAGAATGAGGGTTATAAGGTGCGGAAGTAGAGGAGAGGGGGGGTTG AAAGGTTGTATGCATGCACAACGTTGCTGGGGGGGAAGGTGATAGAGAAA GGAGGAGCCTTAGACAATGCTGCTGGAGATGGGCAGGGGACAAGTTGAGA TGAGGGGGGAAAGCATCTAAACCGTAGGTAGGGTATCTTTGCTGCTGCGG CTGTTGCTGCTAGTGCTGCAGCTGATGGTGATGCAGATGCTGGTGAGCTT GCAGATGCAGATGCAGATGCTGCTGCATGTACACATGTCACAGGAAAAGT TGTTTGTGGCACTCGAAAATAAAAAAGCTATATAAACGTTAAAAGAGGAG GGCGGACAAGAAGAAGTTAAGACATCGATGAGAGCGAGGAGAGAAGATAG AAAATTTGTCGCACAAATACGCATAGAGAAAGACGAGTCATAGGACAAAT CAAACTG back to topprotein sequence of NO14G01050.1 >NO14G01050.1-protein ID=NO14G01050.1-protein|Name=NO14G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=422bp MTGAQTNPANRRLERLGSHLTKKPTGPGFRDGDVVVVSALRTPLCKAKRG AFKSTTTDDLLAPVLAAVVKQSGIDSASLGDIVIGNVLQAGAGAVGARMA QFYAGIPYEVPLCTVNRQCSSGLQAFFQVAAGIQSGLYSTAIAGGVESMS LTDMASSVPEINFDRVQEFKNSKDCIIPMGQTSDEVASRFRVTREEQDIF AAASHAKAEAAQKSGKFAEEIVPITVEGGEGEGVVVKEDEGIRPGTTAEK LGKLRSSFTEGGSTTAGNSSQMTDGAAAVVVASRGAAAEHGLPVLGVLRG AAVVGVPPDIMGVGPAVAIPAALARAGLSVEEVDVYEINEAFASQCLYCV RELGIPVEKVNPNGGAIALGHPLGATGARQIATLLHEMRRTGKRYGVVSM CIGTGMGAAAVFENEGYKVRK* back to topmRNA from alignment at chr14:350596..353151- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G01050.1 ID=NO14G01050.1|Name=NO14G01050.1|organism=Nannochloropsis oceanica|type=mRNA|length=2556bp|location=Sequence derived from alignment at chr14:350596..353151- (Nannochloropsis oceanica) TGCTTTTTGGTCAAGACACTTTACGACGAGCCTCCAAATACACGTGGACT
GTTTGAGAAACTTAATACATTCTTCTCCCTTCTCGCAATAAATGAAATCA
TATCTGGTGAATTGTCAGGTGTGGTGCAAGGCTAGTGAGGAAATTGAGTC
TCGAGCAAGGAAGTAGCCGTTCCCACTTCGCTCCTTCGACAAGAACAAGC
TCCTTCATCCATTGCACGTCCTTTTTCCACACCAGAGACACATTCAGGCC
ACATGTACCAGGTCCTTTTTGTCTTTAATACCCATATTCTAACAGTCCCT
AAAACCTTTATCCTTTCACACGCATATAGGCAAGCAAGCCAAGGACCGTC
TCCCTCTATCCGAGCATCAAATCAGGCAGAGTCCTTCTTCCACAGGCTCA
CCAAAAGAACCAACAACAATGACCGGCGCTCAAACCAACCCTGCCAATCG
CCGCCTGGAGCGTCTCGGAAGCCATCTGACGAAGAAGGTATGTATGAAAA
TGCCGGCGGAAGGAGGGTTTGGCGGTAGGGTTGAGGGAGGGAGTGTTGAT
GCAGGAAAGGCACACAACTTCAATGCGCATGACTTCGTCAGGGATACCCT
AAGCTTGTAAGACTCTGGATACATCTGGAAGATGTGTGACTTTTGAATGA
TGTGTACATAAGTCATTTTGCTGGCCTGTTCGGCTTCTTGAGAGAGACCT
GCCATGCCAAAGCGTAAGTGCTTGGTTCCCAGTTTTCCACTCCATCATCC
TTCAACTCAACCACCCTCCCTCCGATCCCCCTCTACGCATCCTACCCCCA
CCTAGCCTACCGGTCCCGGCTTTCGCGACGGTGATGTCGTGGTTGTCTCT
GCTCTCCGCACACCCCTTTGCAAGGCTAAACGCGGTGCCTTCAAAAGCAC
CACTACTGACGACTTGCTTGCTCCCGTCTTGGCTGCCGTGGTGAAGCAAT
CGGGCATCGACTCTGCTTCCCTCGGAGACATTGTCATTGGTAACGTCTTG
CAGGCGGGTGCTGGGGCTGTTGGAGCAAGGATGGCTCAGTTCTATGCTGG
AATCCCTTATGAGGTGAGGAAGGATGAAGGGAGGGTGGGAGGGAGGAGGG
AAGAAGGCAGATGGGGGTTATCAAGCGTGAACATGGTAATGTAATCTACT
TCCTGAATACTTAGCCGTCGCTCCCTATTATCGTCCCTTCCCAGGTACCT
CTCTGCACCGTGAACCGCCAGTGCTCCTCCGGCCTGCAAGCTTTTTTCCA
AGTCGCCGCCGGCATTCAATCCGGGCTCTACTCCACCGCCATCGCTGGCG
GGGTGGAATCAATGTCCCTCACCGACATGGCATCCTCTGTCCCCGAAATC
AATTTCGACCGGGTCCAGGAATTCAAAAATTCAAAAGACTGCATCATCCC
TATGGGCCAGACAAGCGATGAGGTTGCGTCAAGGTTCAGGGTCACGAGGG
AGGAACAGGACATATTCGCTGCTGCCTCGCACGCCAAGGCAGAGGCGGCG
CAGAAGAGTGGGAAATTTGCGGAGGAGATCGTGCCGATTACAGTGGAGGG
GGGAGAGGGGGAAGGAGTAGTTGTGAAGGAGGACGAGGGGATTCGCCCGG
GGACAACAGCGGAGAAATTGGGAAAATTGAGGTCAAGTTTCACGGAGGGG
GGCTCGACTACGGCAGGGAACAGTAGTCAGATGACTGACGGAGCGGCGGC
GGTGGTGGTAGCGAGTAGGGGCGCAGCAGCAGAGCATGGCTTGCCGGTGT
TGGGCGTCTTGAGGGGGGCGGCGGTTGTAGGTGTGCCTCCGGACATTATG
GGAGTGGGGCCTGCGGTTGCTATTCCTGCGGCGTTAGCACGTGCGGGGTT
GAGCGTCGAGGAGGTGGATGTGTACGAGATTAACGAGGCGTTTGCGAGCC
AGTGCTTGTATTGTGTGCGGGAGTTGGGGATTCCAGTAGAGAAGGTCAAC
CCGAATGGGGGGGCCATTGCGCTTGGTCATCCGTTGGGGGCCACGGGGGC
GAGGCAGATTGCGACGTTGCTGCATGAGATGAGGAGGACGGGAAAGAGGT
ATGGAGTGGTGAGCATGTGCATTGGCACGGGCATGGGGGCGGCGGCCGTG
TTTGAGAATGAGGGTTATAAGGTGCGGAAGTAGAGGAGAGGGGGGGTTGA
AAGGTTGTATGCATGCACAACGTTGCTGGGGGGGAAGGTGATAGAGAAAG
GAGGAGCCTTAGACAATGCTGCTGGAGATGGGCAGGGGACAAGTTGAGAT
GAGGGGGGAAAGCATCTAAACCGTAGGTAGGGTATCTTTGCTGCTGCGGC
TGTTGCTGCTAGTGCTGCAGCTGATGGTGATGCAGATGCTGGTGAGCTTG
CAGATGCAGATGCAGATGCTGCTGCATGTACACATGTCACAGGAAAAGTT
GTTTGTGGCACTCGAAAATAAAAAAGCTATATAAACGTTAAAAGAGGAGG
GCGGACAAGAAGAAGTTAAGACATCGATGAGAGCGAGGAGAGAAGATAGA
AAATTTGTCGCACAAATACGCATAGAGAAAGACGAGTCATAGGACAAATC
AAACTG back to topCoding sequence (CDS) from alignment at chr14:350596..353151- >NO14G01050.1 ID=NO14G01050.1|Name=NO14G01050.1|organism=Nannochloropsis oceanica|type=CDS|length=1266bp|location=Sequence derived from alignment at chr14:350596..353151- (Nannochloropsis oceanica) ATGACCGGCGCTCAAACCAACCCTGCCAATCGCCGCCTGGAGCGTCTCGG AAGCCATCTGACGAAGAAGCCTACCGGTCCCGGCTTTCGCGACGGTGATG TCGTGGTTGTCTCTGCTCTCCGCACACCCCTTTGCAAGGCTAAACGCGGT GCCTTCAAAAGCACCACTACTGACGACTTGCTTGCTCCCGTCTTGGCTGC CGTGGTGAAGCAATCGGGCATCGACTCTGCTTCCCTCGGAGACATTGTCA TTGGTAACGTCTTGCAGGCGGGTGCTGGGGCTGTTGGAGCAAGGATGGCT CAGTTCTATGCTGGAATCCCTTATGAGGTACCTCTCTGCACCGTGAACCG CCAGTGCTCCTCCGGCCTGCAAGCTTTTTTCCAAGTCGCCGCCGGCATTC AATCCGGGCTCTACTCCACCGCCATCGCTGGCGGGGTGGAATCAATGTCC CTCACCGACATGGCATCCTCTGTCCCCGAAATCAATTTCGACCGGGTCCA GGAATTCAAAAATTCAAAAGACTGCATCATCCCTATGGGCCAGACAAGCG ATGAGGTTGCGTCAAGGTTCAGGGTCACGAGGGAGGAACAGGACATATTC GCTGCTGCCTCGCACGCCAAGGCAGAGGCGGCGCAGAAGAGTGGGAAATT TGCGGAGGAGATCGTGCCGATTACAGTGGAGGGGGGAGAGGGGGAAGGAG TAGTTGTGAAGGAGGACGAGGGGATTCGCCCGGGGACAACAGCGGAGAAA TTGGGAAAATTGAGGTCAAGTTTCACGGAGGGGGGCTCGACTACGGCAGG GAACAGTAGTCAGATGACTGACGGAGCGGCGGCGGTGGTGGTAGCGAGTA GGGGCGCAGCAGCAGAGCATGGCTTGCCGGTGTTGGGCGTCTTGAGGGGG GCGGCGGTTGTAGGTGTGCCTCCGGACATTATGGGAGTGGGGCCTGCGGT TGCTATTCCTGCGGCGTTAGCACGTGCGGGGTTGAGCGTCGAGGAGGTGG ATGTGTACGAGATTAACGAGGCGTTTGCGAGCCAGTGCTTGTATTGTGTG CGGGAGTTGGGGATTCCAGTAGAGAAGGTCAACCCGAATGGGGGGGCCAT TGCGCTTGGTCATCCGTTGGGGGCCACGGGGGCGAGGCAGATTGCGACGT TGCTGCATGAGATGAGGAGGACGGGAAAGAGGTATGGAGTGGTGAGCATG TGCATTGGCACGGGCATGGGGGCGGCGGCCGTGTTTGAGAATGAGGGTTA TAAGGTGCGGAAGTAG back to top
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