NO14G00990, NO14G00990 (gene) Nannochloropsis oceanica

Overview
NameNO14G00990
Unique NameNO14G00990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1360
Alignment locationchr14:333696..335055 +

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Properties
Property NameValue
DescriptionNascent polypeptide-associated complex subunit alpha
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:333696..335055 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005854nascent polypeptide-associated complex
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR016641EGD2/NACA
IPR002715Nas_poly-pep-assoc_cplx_dom
Homology
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: EWM24741.1 (nascent polypeptide-associated complex subunit alpha [Nannochloropsis gaditana])

HSP 1 Score: 199.9 bits (507), Expect = 7.200e-48
Identity = 122/141 (86.52%), Postives = 127/141 (90.07%), Query Frame = 0 
Query:   52 LGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELTI 193
            LGMKP+PGIARVTVKKSKNILFVIGQPDV+KSP SDTYIVFGEAKLEDLGAQAQSAAAAQFSREP  MPQG       XXXXXXXXXXXXX   G+VDETGVEAKDIELVMSQA CSRARAVGALKKN+GDIVNAIMELT+
Sbjct:   81 LGMKPLPGIARVTVKKSKNILFVIGQPDVYKSPFSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPTGMPQG------LXXXXXXXXXXXXXXXXGEVDETGVEAKDIELVMSQAACSRARAVGALKKNDGDIVNAIMELTV 215
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: XP_023269117.1 (nascent polypeptide-associated complex subunit alpha-like protein 1, partial [Seriola lalandi dorsalis])

HSP 1 Score: 174.1 bits (440), Expect = 4.200e-40
Identity = 99/147 (67.35%), Postives = 110/147 (74.83%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPM-SMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELTI 193
            KA+QKLGMKPVPGI RVTVKKSKNILFVI +PDVFKSP SDTYI+FGEAK+EDL AQAQ AAA QF    M + P+ A                    E+G+VDETGVE KD+ELVMSQAG SRA+AV ALK NEGDIVNAIMELT+
Sbjct:   36 KAMQKLGMKPVPGIMRVTVKKSKNILFVIAKPDVFKSPASDTYIIFGEAKIEDLSAQAQQAAAEQFKEPVMTNKPEMAKVTKPVIEEIGG--------EDGEVDETGVEPKDVELVMSQAGVSRAKAVKALKINEGDIVNAIMELTM 174
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: XP_003055470.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH60722.1 predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 161.0 bits (406), Expect = 3.700e-36
Identity = 86/146 (58.90%), Postives = 107/146 (73.29%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELTI 193
            KA+ KLGMKPVPG+ RVT+KKSKNILFV+ +PDVFKSP SDT+++FGEAK+EDL A +Q+AAA QF    M   + A                   E+EG++DETGVE KDIELVM+QAG SR +AV ALK N+GDIV+AIM+LT+
Sbjct:   48 KAMLKLGMKPVPGVMRVTIKKSKNILFVVSKPDVFKSPNSDTHVIFGEAKIEDLSAASQAAAAEQFKSADMPSLEPA------------SAATIEEEDEGEIDETGVEPKDIELVMTQAGVSRGKAVNALKSNDGDIVSAIMDLTM 181
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: XP_001700625.1 (predicted protein, partial [Chlamydomonas reinhardtii])

HSP 1 Score: 160.6 bits (405), Expect = 4.800e-36
Identity = 89/146 (60.96%), Postives = 104/146 (71.23%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELTI 193
            KA+QKLGMKPV G+ RVT+KKSKNILFVI  PDVFKSP SDTYI+FGEAK+EDL AQ Q+AAA QF   P +M   A                     EG+VD++GVE KDIELVM+QA  SR++AV ALK  EGDIV+AIMELT+
Sbjct:   40 KAMQKLGMKPVTGVTRVTIKKSKNILFVIQSPDVFKSPASDTYIIFGEAKIEDLSAQTQAAAAEQFKMRPEAMAGAAALAG-----------------EGEVDDSGVEQKDIELVMTQANVSRSKAVKALKNAEGDIVSAIMELTM 168
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: XP_022882769.1 (nascent polypeptide-associated complex subunit alpha-like protein 3 [Olea europaea var. sylvestris])

HSP 1 Score: 159.1 bits (401), Expect = 1.400e-35
Identity = 88/145 (60.69%), Postives = 106/145 (73.10%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELT 192
            KA+ KLGMKP+PG++RVTVKKSKNILFVI +PDVFKSP SDTYI+FGEAK+EDL +Q Q+ AA QF    +S                        +++ DVDETGVE KDIELVM+QAG SRARAV ALK+++GDIV+AIMELT
Sbjct:   67 KAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNIS------------NVAPKPEPVTVAQDDEDVDETGVEPKDIELVMTQAGVSRARAVKALKESDGDIVSAIMELT 199
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: GAV87450.1 (UBA domain-containing protein/NAC domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 158.3 bits (399), Expect = 2.400e-35
Identity = 88/149 (59.06%), Postives = 108/149 (72.48%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQF----SREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELT 192
            KA+ KLGMKP+PG++RVTVKKSKNILFVI +PDVFKSP SDTY++FGEAK+EDL +Q QS AA QF    +   +S P+ +                   +++ DVDETGVE KDIELVM+QAG SR+RAV ALK  +GDIV+AIMELT
Sbjct:   69 KAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQAAEQFKAPSASNVLSKPESS----------------ALAQDDEDVDETGVEPKDIELVMTQAGVSRSRAVKALKAADGDIVSAIMELT 201
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: GAQ86365.1 (Nascent polypeptide-associated complex (NAC) alpha subunit family protein [Klebsormidium nitens])

HSP 1 Score: 157.5 bits (397), Expect = 4.100e-35
Identity = 87/143 (60.84%), Postives = 104/143 (72.73%), Query Frame = 0 
Query:   49 VQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELT 192
            +QKLGMKPVPG+ RVT+KKSKNILFVI +PDVFKSP SDTYI+FGEAK+EDL +Q QS AA QF       P+ A                   +++ +VDETGVE KDIELVM+QAG SRA+AV ALK+ +GDIV+AIMELT
Sbjct:   70 MQKLGMKPVPGVQRVTIKKSKNILFVISKPDVFKSPASDTYIIFGEAKIEDLSSQLQSQAAQQF-----QAPEAA------LETPKQSASIADLDDDEEVDETGVEPKDIELVMTQAGVSRAKAVSALKQTDGDIVSAIMELT 201
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: PHT36997.1 (Nascent polypeptide-associated complex subunit alpha-like protein 3 [Capsicum baccatum])

HSP 1 Score: 157.1 bits (396), Expect = 5.300e-35
Identity = 87/145 (60.00%), Postives = 104/145 (71.72%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELT 192
            KA+ KLGMKP+PG++RVTVKKSKNILFVI +PDVFKSP SDTY++FGEAK+EDL +Q QS AA QF    +S                        +++ DVDETGVE KDIELVM+QAG SRA+AV ALK  +GDIV+AIMELT
Sbjct:   66 KAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYVIFGEAKIEDLSSQLQSQAAEQFKAPNLS------------NVISKPEPSTVAQDDEDVDETGVEPKDIELVMTQAGVSRAKAVKALKAADGDIVSAIMELT 198
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: XP_022869442.1 (nascent polypeptide-associated complex subunit alpha-like protein 3 isoform X1 [Olea europaea var. sylvestris])

HSP 1 Score: 157.1 bits (396), Expect = 5.300e-35
Identity = 88/145 (60.69%), Postives = 105/145 (72.41%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELT 192
            KA+ KLGMKP+PG++RVTVKKSKNILFVI +PDVFKSP SDTYI+FGEAK+EDL +Q Q+ AA QF    +S                         ++ DVDETGVE KDIELVM+QAG SRARAV ALK+++GDIV+AIMELT
Sbjct:   67 KAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVS------------NIAPKPEPVTVALDDEDVDETGVEPKDIELVMTQAGVSRARAVKALKESDGDIVSAIMELT 199
[Close]
BLAST of NO14G00990 vs. NCBI_GenBank
Match: XP_022869443.1 (nascent polypeptide-associated complex subunit alpha-like protein isoform X2 [Olea europaea var. sylvestris])

HSP 1 Score: 157.1 bits (396), Expect = 5.300e-35
Identity = 88/145 (60.69%), Postives = 105/145 (72.41%), Query Frame = 0 
Query:   47 KAVQKLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDLGAQAQSAAAAQFSREPMSMPQGAXXXXXXXXXXXXXXXXXXXEEEGDVDETGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELT 192
            KA+ KLGMKP+PG++RVTVKKSKNILFVI +PDVFKSP SDTYI+FGEAK+EDL +Q Q+ AA QF    +S                         ++ DVDETGVE KDIELVM+QAG SRARAV ALK+++GDIV+AIMELT
Sbjct:   66 KAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPNSDTYIIFGEAKIEDLSSQLQTQAAEQFKAPNVS------------NIAPKPEPVTVALDDEDVDETGVEPKDIELVMTQAGVSRARAVKALKESDGDIVSAIMELT 198
The following BLAST results are available for this feature:
BLAST of NO14G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24741.17.200e-4886.52nascent polypeptide-associated complex subunit alp... [more]
XP_023269117.14.200e-4067.35nascent polypeptide-associated complex subunit alp... [more]
XP_003055470.13.700e-3658.90predicted protein [Micromonas pusilla CCMP1545] >E... [more]
XP_001700625.14.800e-3660.96predicted protein, partial [Chlamydomonas reinhard... [more]
XP_022882769.11.400e-3560.69nascent polypeptide-associated complex subunit alp... [more]
GAV87450.12.400e-3559.06UBA domain-containing protein/NAC domain-containin... [more]
GAQ86365.14.100e-3560.84Nascent polypeptide-associated complex (NAC) alpha... [more]
PHT36997.15.300e-3560.00Nascent polypeptide-associated complex subunit alp... [more]
XP_022869442.15.300e-3560.69nascent polypeptide-associated complex subunit alp... [more]
XP_022869443.15.300e-3560.69nascent polypeptide-associated complex subunit alp... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002255NSK002255Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00990.1NO14G00990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101149g1gene5745Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00990.1NO14G00990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00990 ID=NO14G00990|Name=NO14G00990|organism=Nannochloropsis oceanica|type=gene|length=1360bp
TGGACCGAGCGGCTGCGAAGCAATGTGGTGGTGGTGATGAAAACGCGCGC
TCCTTCCACTTCTGTGCTCGTGACCGAGGAATATGCGTACGCTCACGTCT
CGGTAGGCCTCTTAAGGGGTCGCGTGTGCATGCCAGTAGAACGCCCCGGC
CCCGGTTACGCGTTATCGTCGCTTTTATTAGCCTCCCCTCCCCTGTGCCC
GTGCCTAGGTTCTTCTCTCCTTCGCTGGGATACTCTCTTAAGTTGGACAC
CTGCAAACACTAACCACAACCCTCCACCCCCCCTTCACCGCACGCTAAAC
AACGACAGTACACACTAGGAAGACAACACAGAAAATCATGGCCAAGGAGC
AAGAGCCCAAGGTGGTGGAGGAGAGCGAAGAGGAGGAGGAGGAGGAGTCG
GAGGAGGGCTCCGATGAGGAAGAAGAGGCAGGTGGCAAGGGTGGCAAGCA
AAGCCGCAGCGAGAAGAAGAGCCGAAAGGCCGTCCAGAAGCTGgtacgtc
gtgaatagagagagggaaaggggaaattaaatgcggagtgcttgggtgtt
caagagaggcggagatggggattcaggaggtctgaagggcagagagaagg
ggaaaggacatgtaccttgcgtggattttgtccttcctttgaggtagaga
tgtttggtggttgacctgcctagccctcctcctattcatcacatatttcg
tgtctcgtatctgcatgttgtctagctcggtcgtaccaaatttcgccttc
cattcacgctccctccctttctccctttcctccctccctttcttccctcc
ctcccttcataccctcccttgtacatcagGGCATGAAACCAGTCCCTGGC
ATTGCCCGCGTCACGGTCAAGAAGAGCAAGAACATCTTGTTCGTCATCGG
TCAGCCTGACGTCTTTAAGTCCCCTGTCTCGGACACTTATATCGTGTTTG
GTGAGGCCAAGCTCGAGGACCTGGGAGCTCAGGCCCAAAGCGCTGCGGCC
GCGCAGTTCTCCCGTGAGCCCATGTCTATGCCTCAGGGTGCAATGGCGGC
GGCGGCAGCTGCTGCTGGGGGTGGAGGGGGGATCCCCTCGGGCGTAGTAG
AGGAGGAAGGGGATGTAGACGAAACGGGGGTGGAAGCCAAGGATATTGAG
CTGGTCATGAGCCAAGCTGGGTGCTCGCGGGCGAGGGCCGTGGGGGCATT
GAAGAAGAACGAGGGGGATATCGTCAATGCCATCATGGAGCTGACAATTT
AAGACGAATGTGAACCCGGCGAGCGCGAGGAGGATGGGGGGAGGGAGGGG
GAGGGAGAGTTAGGGAGAGCAAAAGAAGGAAACGAGAGCAAAGAAAGGGG
TCGGCGATTG
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protein sequence of NO14G00990.1

>NO14G00990.1-protein ID=NO14G00990.1-protein|Name=NO14G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=193bp
MAKEQEPKVVEESEEEEEEESEEGSDEEEEAGGKGGKQSRSEKKSRKAVQ
KLGMKPVPGIARVTVKKSKNILFVIGQPDVFKSPVSDTYIVFGEAKLEDL
GAQAQSAAAAQFSREPMSMPQGAMAAAAAAAGGGGGIPSGVVEEEGDVDE
TGVEAKDIELVMSQAGCSRARAVGALKKNEGDIVNAIMELTI*
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Synonyms
Publications