NO14G00660, NO14G00660 (gene) Nannochloropsis oceanica

Overview
NameNO14G00660
Unique NameNO14G00660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2235
Alignment locationchr14:246526..248760 -

Link to JBrowse

Properties
Property NameValue
DescriptionAutophagy regulatory protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:246526..248760 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
GO:0030242autophagy of peroxisome
GO:0006914autophagy
Vocabulary: INTERPRO
TermDefinition
IPR026849ATG2
IPR026886ATG2_fungi/plants
IPR015412Autophagy-rel_C
Homology
BLAST of NO14G00660 vs. NCBI_GenBank
Match: EWM24714.1 (autophagy regulatory protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 490.0 bits (1260), Expect = 1.100e-134
Identity = 340/648 (52.47%), Postives = 394/648 (60.80%), Query Frame = 0
Query:    1 MFAGRDWGEREDGRGGMEGRVAGARSEEERHVPSSKHLQGLFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRKGRRVDCMVEVCLSHASARLDTHLPPXXXXXXXXXXXXXXXXXXXXXXTLIIHVLDLYVLDRIFSVQPRRILGYWRSDSEHPRDGSAPMIEVEMAVVCPLYDATVGMGRXXXXXXXXXXXXXXXXXXXEVSDAIPVHDVSGVXXXXXXXXXXGLPAQALLPPLPGATEEDEGEDNIKGAVKEGQTSAQAATVSPAPALXXXXXXXXXXXXXPEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPS-----LAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGLTKVVASTLNDLVTIEGG-------RXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWRV 637
            +FAGRDWGERE GR  + GR  G   E E   P  KHL+ L                                          XXXXXXXXXXX   GR+V CM+EVCLSHA  +  + +P                          + V DL VLDRI SVQPRR+LGYWRSD EHPRDG+APM++V+++   P YDA+V  G+                                                                                         XXXXXXXXXXXXX   P+EEL LRVRLLPLRV VD+HT+DF+S FF L                 R  P  +    P+     LAFFQS+L+RPVK+KLDTQTRPL++REVQRGNYAELLNLCPLKNVKLQL AV+LRG+SGWAA+G G+RESWVRDVT+KQ+YR+LMGPS IRS++N+G G+ADL+++PLE YRRDGR+ RGLRKG I+CLRN++IEALNASVG+T+ VASTLNDLV +EGG        XXXXXXXXXXXXXXXXXX   EHAYD+LSKG  T AHTIIA+PIQEMERSGP+GS+RAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDP SRREEEELWRV
Sbjct:   17 LFAGRDWGERE-GRKALGGREGG--REGEVRAPRGKHLEELL-------------------------------DGGEGGRTPGXXXXXXXXXXXXXXGRQVGCMMEVCLSHARLQHASFMPGQTRAARSR-----------------VWVSDLCVLDRIISVQPRRVLGYWRSDREHPRDGTAPMLQVDVSAWTPRYDASVVQGK---------------------------------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXPVEELTLRVRLLPLRVLVDRHTIDFVSNFFALV------------DASARTSPPPSAGTSPALPLEHLAFFQSVLVRPVKVKLDTQTRPLNLREVQRGNYAELLNLCPLKNVKLQLAAVTLRGISGWAAIGEGVRESWVRDVTEKQMYRLLMGPSPIRSVFNMGSGVADLILLPLEHYRRDGRVFRGLRKGVIRCLRNVSIEALNASVGITRAVASTLNDLVALEGGXXXXXXXXXXXXXXXXXXXXXXXXXXEGLEHAYDTLSKGFSTVAHTIIAVPIQEMERSGPQGSVRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPGSRREEEELWRV 520          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: CBN78544.1 (ATG2 Autophagy-related protein homolog [Ectocarpus siliculosus])

HSP 1 Score: 240.7 bits (613), Expect = 1.200e-59
Identity = 174/544 (31.99%), Postives = 241/544 (44.30%), Query Frame = 0
Query:   95 KRKGRRVDCMVEVCLSHASARLDTHLPPXXXXXXXXXXXXXXXXXXXXXXTLIIHVLDLYVLDRIFSVQPRRILGYWRSDSEHPRDGSAPMIEVEMAVVCPLYDATVGMGRXXXXXXXXXXXXXXXXXXXEVSDAIPVHDVSGVXXXXXXXXXXGLPAQALLPPLPGATEEDEGEDNIKGAVKEGQTSAQAATVSPAPALXXXXXXXXXXXXXPEAPI-EELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGLTKVVASTLNDLVTIEGGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMER-SGPKGS--MRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELW 635
            +R GR   CMVEV L ++S RLD   P                        L+  V DL+  D + S +PR+ L +WR D  HPR+    M+ V M    P                               SD     D                                                                           AP+ +E++L+VRLLP+ +   QHT+DF  +F                     + P+ A  +     F     +   K+K+D Q R + V  +Q G+Y ELLNL PL+ V L L  V L GVSGW  V   + +SWV+D+T  Q+++ L G +A+R +  +G+G+ADLV++P++QYRRDGR+LRGLRKG    LR ITIE L+ S  +   V+ TL+D+V  + G                      EHAYD+L+K +  AA TIIAIP ++ E   GP G   +R+V RALP+AV++PVVG SEA+S TLLG RN + PV R+EEE  W
Sbjct: 1805 RRTGRDTSCMVEVVLENSSLRLDNFHP---------------GPPTSLLSNLLFSVKDLHASDTLTSSRPRKALHHWRDDRRHPREFQHKMVTVRMTTRSP-------------------------------SDHFCPED---------------------------------------------------------------------------APLGDEVMLKVRLLPIHLSFGQHTVDFFRSF----SPEVQSSPTAHEKQAAGEDPTAAAEMGAGPLFISCCDVGSFKVKIDYQPRTIKVAALQNGDYMELLNLFPLEGVHLTLQKVVLTGVSGWNGVTQLLLQSWVQDITTNQLHKFLAGTTAVRPLVTMGKGVADLVLLPVQQYRRDGRVLRGLRKGTQSFLRAITIETLHTSHRVASFVSRTLDDIVA-QPGAQASLRGLEYYDEQPTGVIDSLEHAYDTLAKEVQVAAQTIIAIPYEDQEEVVGPHGRSYVRSVARALPVAVLRPVVGASEAVSCTLLGFRNYMAPVMRKEEEMRW 2222          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: KIP09539.1 (hypothetical protein PHLGIDRAFT_116332 [Phlebiopsis gigantea 11061_1 CR5-6])

HSP 1 Score: 205.3 bits (521), Expect = 5.600e-49
Identity = 125/351 (35.61%), Postives = 185/351 (52.71%), Query Frame = 0
Query:  311 PIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPS-LAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGLTK-----------VVASTLNDLVTIE--------------GGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWR 636
            P EE  LR ++LPLR++VDQ  LDFL  FF+                    Q + A ++ PS   FFQ + + PV +KLD + R +D R ++ G   EL+N       ++ L  ++L G++GWA +G  + + W  DV   Q+  ++ G + IRS+ NVG G+ADLV++P+ QY++DGR++RGL+KG    +R+   EA+     L             V+     D VT E              G                         AY SL + L +AA TI+A+P++  ERSG +GS+RAV+RA+PIAV+KP++G SEA+S TLLG+ N LDP  R E E  ++
Sbjct: 1769 PAEEARLRAKILPLRLHVDQDALDFLKKFFSFKDA----------------QNAPAASIEPSEEIFFQQVEVFPVDLKLDYKPRRVDYRALRDGRTIELMNFFHFDGAEMTLRHITLTGITGWARMGDLLNDLWTPDVKATQLVEVISGVAPIRSVVNVGSGVADLVLLPISQYKKDGRVVRGLQKGTTAFVRSTATEAVKLGARLATGTQVILEQAEGVIGGQFKDSVTAEALQIPVSYREVDEQGEDEIPEELISRYADQPSSVREGVVSAYKSLRRNLTSAAQTILAVPMEVYERSGNEGSVRAVVRAVPIAVLKPMIGASEAVSQTLLGLHNTLDPNVRAENEAKYK 2103          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: KZT56758.1 (hypothetical protein CALCODRAFT_517970 [Calocera cornea HHB12733])

HSP 1 Score: 201.8 bits (512), Expect = 6.200e-48
Identity = 123/346 (35.55%), Postives = 181/346 (52.31%), Query Frame = 0
Query:  308 PEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGLT--------------------KVVASTLNDLVTIEGG--RXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEE 632
            P+ P EE  L+ +LLPL++ +DQ  LDF+  FF                    + P+E        AF Q + + PV IKLD + + +D R ++ GN  EL+N       ++ L  + L GV+GWA VG  + + W  DV   Q+  +L G + IRS+ NVG GMADLV++P+ QYR+D RL+RG++KGA   +++  +EAL     L                      V A T++D    E G                        + AY SLSK + +AA TI+A+P++  ER   +G +R V+RA+PIAV+KP++G +EA+S TLLG+RN +DP  R E E
Sbjct: 1516 PDEPTEEARLKAKLLPLKLNIDQDALDFIKHFFMF--------QKAGGSVASNEAPAEE-------AFIQHVEVFPVDIKLDYKPKRVDYRALREGNTIELMNFFHWDGAEITLRHIQLSGVTGWANVGELLNDMWTPDVKAHQLADVLSGIAPIRSVVNVGSGMADLVLLPIGQYRKDQRLVRGMQKGAAAFMKSTAMEALKVGAQLATGTQVILEQAEHALGGNFSHTVTAETVDDWSDDESGDDNNDRPELISKYADQPMDFREGVQAAYKSLSKNVHSAAQTILAVPMEVYERPNGQGPVRTVVRAVPIAVLKPMIGATEAVSKTLLGIRNSMDPSMRLEHE 1846          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: EXX72697.1 (Atg2p [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 200.3 bits (508), Expect = 1.800e-47
Identity = 113/355 (31.83%), Postives = 186/355 (52.39%), Query Frame = 0
Query:  308 PEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGL---TKVVASTLNDLVTIE------------------------GGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWR 636
            P   +EEL L+ R LPLR Y+DQ  L F+  FF+                  +D   E         +FQSI I P+K+K+D + + +D   ++ GN  EL+N    +  ++ L  V L GV GW  +   +  +W+  +   Q+  ++ G + IRS+ N+G G+ADL+++P+EQY++DGR++RGL+KG     R  T+EA+     L   T+++    +++++ E                                                E AY SL   +GTAAHTI A+P++  E++G +G++RAVIRA+P+AV+KP++G +EA+S TLLG+RN +DP  + + E+ ++
Sbjct: 1695 PTDSLEELRLKARFLPLRFYIDQDALQFIIQFFSF-----------------QDSTIEKPPKADDNTYFQSIEIHPIKMKIDYKPKHIDYANLKEGNLVELMNFFHFEAAEMTLNNVKLTGVKGWQRLAEELGAAWLPHIKSTQVPNVVSGVAPIRSLVNLGSGVADLILLPIEQYKKDGRVIRGLQKGTQSFARATTMEAIKFGTKLAVGTQILLEHADEILSFESQTSTENRNNSSNTTIGTVEEEFDSDDENTKELISKYANQPADLNEGIEKAYKSLRTNIGTAAHTIFAVPMEVYEKTGTQGTVRAVIRAVPVAVLKPMIGATEAVSQTLLGLRNSIDPNKKLQTEDKYK 2032          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: GBC46056.1 (autophagy-related protein 2 [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 200.3 bits (508), Expect = 1.800e-47
Identity = 113/355 (31.83%), Postives = 186/355 (52.39%), Query Frame = 0
Query:  308 PEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGL---TKVVASTLNDLVTIE------------------------GGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWR 636
            P   +EEL L+ R LPLR Y+DQ  L F+  FF+                  +D   E         +FQSI I P+K+K+D + + +D   ++ GN  EL+N    +  ++ L  V L GV GW  +   +  +W+  +   Q+  ++ G + IRS+ N+G G+ADL+++P+EQY++DGR++RGL+KG     R  T+EA+     L   T+++    +++++ E                                                E AY SL   +GTAAHTI A+P++  E++G +G++RAVIRA+P+AV+KP++G +EA+S TLLG+RN +DP  + + E+ ++
Sbjct: 3003 PTDSLEELRLKARFLPLRFYIDQDALQFIIQFFSF-----------------QDSTIEKPPKADDNTYFQSIEIHPIKMKIDYKPKHIDYANLKEGNLVELMNFFHFEAAEMTLNNVKLTGVKGWQRLAEELGAAWLPHIKSTQVPNVVSGVAPIRSLVNLGSGVADLILLPIEQYKKDGRVIRGLQKGTQSFARATTMEAIKFGTKLAVGTQILLEHADEILSFESQTSTENRNNSSNTTIGTVEEEFDSDDENTKELISKYANQPADLNEGIEKAYKSLRTNIGTAAHTIFAVPMEVYEKTGTQGTVRAVIRAVPVAVLKPMIGATEAVSQTLLGLRNSIDPNKKLQTEDKYK 3340          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: PKC13478.1 (hypothetical protein RhiirA5_410548 [Rhizophagus irregularis])

HSP 1 Score: 200.3 bits (508), Expect = 1.800e-47
Identity = 113/355 (31.83%), Postives = 186/355 (52.39%), Query Frame = 0
Query:  308 PEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGL---TKVVASTLNDLVTIE------------------------GGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWR 636
            P   +EEL L+ R LPLR Y+DQ  L F+  FF+                  +D   E         +FQSI I P+K+K+D + + +D   ++ GN  EL+N    +  ++ L  V L GV GW  +   +  +W+  +   Q+  ++ G + IRS+ N+G G+ADL+++P+EQY++DGR++RGL+KG     R  T+EA+     L   T+++    +++++ E                                                E AY SL   +GTAAHTI A+P++  E++G +G++RAVIRA+P+AV+KP++G +EA+S TLLG+RN +DP  + + E+ ++
Sbjct: 1795 PTDSLEELRLKARFLPLRFYIDQDALQFIIQFFSF-----------------QDSTIEKPPKADDNTYFQSIEIHPIKMKIDYKPKHIDYANLKEGNLVELMNFFHFEAAEMTLNNVKLTGVKGWQRLAEELGAAWLPHIKSTQVPNVVSGVAPIRSLVNLGSGVADLILLPIEQYKKDGRVIRGLQKGTQSFARATTMEAIKFGTKLAVGTQILLEHADEILSFESQTSTENRNNSSNTTIGTVEEEFDSDDENTKELISKYANQPADLNEGIEKAYKSLRTNIGTAAHTIFAVPMEVYEKTGTQGTVRAVIRAVPVAVLKPMIGATEAVSQTLLGLRNSIDPNKKLQTEDKYK 2132          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: PKC61430.1 (hypothetical protein RhiirA1_539163 [Rhizophagus irregularis])

HSP 1 Score: 200.3 bits (508), Expect = 1.800e-47
Identity = 113/355 (31.83%), Postives = 186/355 (52.39%), Query Frame = 0
Query:  308 PEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGL---TKVVASTLNDLVTIE------------------------GGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWR 636
            P   +EEL L+ R LPLR Y+DQ  L F+  FF+                  +D   E         +FQSI I P+K+K+D + + +D   ++ GN  EL+N    +  ++ L  V L GV GW  +   +  +W+  +   Q+  ++ G + IRS+ N+G G+ADL+++P+EQY++DGR++RGL+KG     R  T+EA+     L   T+++    +++++ E                                                E AY SL   +GTAAHTI A+P++  E++G +G++RAVIRA+P+AV+KP++G +EA+S TLLG+RN +DP  + + E+ ++
Sbjct:  552 PTDSLEELRLKARFLPLRFYIDQDALQFIIQFFSF-----------------QDSTIEKPPKADDNTYFQSIEIHPIKMKIDYKPKHIDYANLKEGNLVELMNFFHFEAAEMTLNNVKLTGVKGWQRLAEELGAAWLPHIKSTQVPNVVSGVAPIRSLVNLGSGVADLILLPIEQYKKDGRVIRGLQKGTQSFARATTMEAIKFGTKLAVGTQILLEHADEILSFESQTSTENRNNSSNTTIGTVEEEFDSDDENTKELISKYANQPADLNEGIEKAYKSLRTNIGTAAHTIFAVPMEVYEKTGTQGTVRAVIRAVPVAVLKPMIGATEAVSQTLLGLRNSIDPNKKLQTEDKYK 889          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: PKK78733.1 (hypothetical protein RhiirC2_728888 [Rhizophagus irregularis])

HSP 1 Score: 200.3 bits (508), Expect = 1.800e-47
Identity = 113/355 (31.83%), Postives = 186/355 (52.39%), Query Frame = 0
Query:  308 PEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGL---TKVVASTLNDLVTIE------------------------GGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWR 636
            P   +EEL L+ R LPLR Y+DQ  L F+  FF+                  +D   E         +FQSI I P+K+K+D + + +D   ++ GN  EL+N    +  ++ L  V L GV GW  +   +  +W+  +   Q+  ++ G + IRS+ N+G G+ADL+++P+EQY++DGR++RGL+KG     R  T+EA+     L   T+++    +++++ E                                                E AY SL   +GTAAHTI A+P++  E++G +G++RAVIRA+P+AV+KP++G +EA+S TLLG+RN +DP  + + E+ ++
Sbjct: 1815 PTDSLEELRLKARFLPLRFYIDQDALQFIIQFFSF-----------------QDSTIEKPPKADDNTYFQSIEIHPIKMKIDYKPKHIDYANLKEGNLVELMNFFHFEAAEMTLNNVKLTGVKGWQRLAEELGAAWLPHIKSTQVPNVVSGVAPIRSLVNLGSGVADLILLPIEQYKKDGRVIRGLQKGTQSFARATTMEAIKFGTKLAVGTQILLEHADEILSFESQTSTENRNNSSNTTIGTVEEEFDSDDENTKELISKYANQPADLNEGIEKAYKSLRTNIGTAAHTIFAVPMEVYEKTGTQGTVRAVIRAVPVAVLKPMIGATEAVSQTLLGLRNSIDPNKKLQTEDKYK 2152          
BLAST of NO14G00660 vs. NCBI_GenBank
Match: PKY19297.1 (hypothetical protein RhiirB3_432328 [Rhizophagus irregularis])

HSP 1 Score: 200.3 bits (508), Expect = 1.800e-47
Identity = 113/355 (31.83%), Postives = 186/355 (52.39%), Query Frame = 0
Query:  308 PEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAXXXXXXXXXXXXXXXXRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREVQRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQKQIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKCLRNITIEALNASVGL---TKVVASTLNDLVTIE------------------------GGRXXXXXXXXXXXXXXXXXXXXXEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAVVKPVVGVSEALSITLLGVRNKLDPVSRREEEELWR 636
            P   +EEL L+ R LPLR Y+DQ  L F+  FF+                  +D   E         +FQSI I P+K+K+D + + +D   ++ GN  EL+N    +  ++ L  V L GV GW  +   +  +W+  +   Q+  ++ G + IRS+ N+G G+ADL+++P+EQY++DGR++RGL+KG     R  T+EA+     L   T+++    +++++ E                                                E AY SL   +GTAAHTI A+P++  E++G +G++RAVIRA+P+AV+KP++G +EA+S TLLG+RN +DP  + + E+ ++
Sbjct: 1795 PTDSLEELRLKARFLPLRFYIDQDALQFIIQFFSF-----------------QDSTIEKPPKADDNTYFQSIEIHPIKMKIDYKPKHIDYANLKEGNLVELMNFFHFEAAEMTLNNVKLTGVKGWQRLAEELGAAWLPHIKSTQVPNVVSGVAPIRSLVNLGSGVADLILLPIEQYKKDGRVIRGLQKGTQSFARATTMEAIKFGTKLAVGTQILLEHADEILSFESQTSTENRNNSSNTTIGTVEEEFDSDDENTKELISKYANQPADLNEGIEKAYKSLRTNIGTAAHTIFAVPMEVYEKTGTQGTVRAVIRAVPVAVLKPMIGATEAVSQTLLGLRNSIDPNKKLQTEDKYK 2132          
The following BLAST results are available for this feature:
BLAST of NO14G00660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24714.11.100e-13452.47autophagy regulatory protein, partial [Nannochloro... [more]
CBN78544.11.200e-5931.99ATG2 Autophagy-related protein homolog [Ectocarpus... [more]
KIP09539.15.600e-4935.61hypothetical protein PHLGIDRAFT_116332 [Phlebiopsi... [more]
KZT56758.16.200e-4835.55hypothetical protein CALCODRAFT_517970 [Calocera c... [more]
EXX72697.11.800e-4731.83Atg2p [Rhizophagus irregularis DAOM 197198w][more]
GBC46056.11.800e-4731.83autophagy-related protein 2 [Rhizophagus irregular... [more]
PKC13478.11.800e-4731.83hypothetical protein RhiirA5_410548 [Rhizophagus i... [more]
PKC61430.11.800e-4731.83hypothetical protein RhiirA1_539163 [Rhizophagus i... [more]
PKK78733.11.800e-4731.83hypothetical protein RhiirC2_728888 [Rhizophagus i... [more]
PKY19297.11.800e-4731.83hypothetical protein RhiirB3_432328 [Rhizophagus i... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL139nonsL139Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR024ngnoR024Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002291NSK002291Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00660.1NO14G00660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|589802gene_5635Nannochloropsis oceanica (N. oceanica CCMP1779)gene
ATG2gene5772Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00660.1NO14G00660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00660 ID=NO14G00660|Name=NO14G00660|organism=Nannochloropsis oceanica|type=gene|length=2235bp
ATGTTCGCCGGGAGGGACTGGGGGGAGAGGGAGGACGGGAGGGGAGGGAT
GGAGGGGAGGGTGGCCGGTGCTAGGAGTGAGGAGGAAAGGCATGTGCCGA
GCTCGAAGCACTTGCAGGGTCTTTTTGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGGGGAGAAGGAGGAAGAGGAGGAGGAGGCACAGCTGCGGC
TACTGCTGGTTCCAGCTCTCCCTCCAAATGTAGCAGGACTGGGATTACAA
AGATGAAGAGGAGGAGGACGAGGATGGGGAGAAAGAGGAAGGGTCGTCGC
GTAGACTGCATGGTCGAGGTTTGCCTTTCGCATGCCAGTGCCCGTCTGGA
CACGCATCTCCCTCCCTCCCCCTCGCCTGCTTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCGTCTTCCTATCGTTCCTCCACCCTCATCATTCATGTC
TTGGATTTGTATGTCCTCGATCGCATCTTCTCGGTGCAGCCTCGACGGAT
TCTGGGGTATTGGAGATCAGATTCCGAGCATCCAAGGGACGGGAGTGCGC
CTATGATAGAGGTGGAAATGGCGGTTGTATGTCCATTGTACGATGCAACG
GTAGGCATGGGACGAGGAAAGGAGGGAGGGAGGGAGGGAGGGAGAGAGGG
AGGGAGGCTACCTGTTGCGTTGGAGGTGTCGGATGCCATTCCTGTGCATG
ACGTGTCTGGTGTGAGGGAGGGAGGGACGAAGGGAGGGAAGGAGGGACTC
CCTGCACAGGCGCTCCTTCCTCCCCTCCCTGGAGCGACGGAGGAGGACGA
GGGAGAAGATAACATAAAGGGTGCCGTGAAGGAGGGACAAACGAGTGCAC
AAGCAGCAACAGTGTCACCAGCACCAGCACTACCACCACCACCACAAGCA
GCACTAGCAGCAACAGCAGCACCGGAAGCGCCCATTGAAGAGCTCGTCCT
TCGCGTTCGCCTCCTCCCCCTCCGGGTCTACGTCGATCAGCACACTCTTG
ATTTCCTCTCGGCCTTCTTCACCCTTGCTGAGTCCTCCTCCTCTTCCTCC
TCATCCTCCTCCTCTTCCTCCCACCCCCGGGATCAACCTTCCGAAGCTCT
CGCCGTCCTTCCCTCCCTCGCCTTCTTCCAATCCATTCTCATCCGCCCCG
TGAAAATTAAATTGGACACCCAAACTCGTCCCTTGGACGTTCGTGAAGTC
CAACGCGGCAATTATGCCGAGCTCCTCAACCTCTGCCCGTTGAAAAACGT
TAAGTTGCAATTAACGGCTGTGTCTCTCCGGGGCGTCAGTGGATGGGCGG
CCGTGGGCATAGGCATCCGAGAGTCGTGGGTGCGTGACGTCACGCAAAAG
CAGATTTACCGGATTCTGATGGGACCTAGCGCGATTCGATCCATGTATAA
TGTGGGGCAGGGCATGGCCGACTTGGTCATTGTCCCGTTGGAGCAATATC
GGAGGGACGGCCGGTTGTTGCGCGGCTTGCGTAAAGGCGCGATTAAGTGT
TTGAGGAACATCACGATTGAGGCCTTGAACGCTTCGGTTGGTTTGACGAA
AGTGGTGGCGTCGACGCTGAACGATTTGGTGACGATCGAGGGAGGGAGGG
AGGGAGGGAGGGAGAGGTTGATCCAGCCTGAACTGCAGCCAAAGGGGATG
CGGGAGGGGTTAGAGCACGCGTACGATTCCTTGTCGAAGGGGCTGGGGAC
GGCAGCGCATACGATCATTGCGATTCCAATTCAGGAGATGGAGAGGAGTG
GGCCGAAGGGGAGTATGAGAGCGGTAATTCGCGCGCTGCCTATTGCGGTG
GTGAAGCCGGTTGTGGGCGTGTCGGAGGCGCTGTCGATCACGTTGTTGGG
AGTGAGGAATAAGCTGGACCCGGTGAGTCGGAGGGAGGAGGAGGAGTTAT
GGCGTGTATAGCTTCGTGTGCTTGAACGTTCCTGAACGTTCCTTCCTTCA
CGTATATATATACATGTAAATATCTATGAATGTAGACACACGTCCGATAA
GAAGCAGAAAAGAGAATTTTTTTTTTGAAAGATCTAGTGTAGCAAAGGTG
TGGATTGAAGGAGTAGACGGGCAGGCAGGCGGAATAGATAAAAGCAAAGA
AACAGAAATGCATTGCATGACGTGTGTTTGTGTAAATGAGAATCATTAAA
CAGGCAGCGATCGACAAGCTTCTCCCTTGTAAAGACGAAGCAACGAAGAG
GAAAGATAATTGAGTTACTTATGGGTCAACATGCT
back to top

protein sequence of NO14G00660.1

>NO14G00660.1-protein ID=NO14G00660.1-protein|Name=NO14G00660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=637bp
MFAGRDWGEREDGRGGMEGRVAGARSEEERHVPSSKHLQGLFGGGGGGGG
GGGGGEGGRGGGGTAAATAGSSSPSKCSRTGITKMKRRRTRMGRKRKGRR
VDCMVEVCLSHASARLDTHLPPSPSPASSSSSSSSSSSSSYRSSTLIIHV
LDLYVLDRIFSVQPRRILGYWRSDSEHPRDGSAPMIEVEMAVVCPLYDAT
VGMGRGKEGGREGGREGGRLPVALEVSDAIPVHDVSGVREGGTKGGKEGL
PAQALLPPLPGATEEDEGEDNIKGAVKEGQTSAQAATVSPAPALPPPPQA
ALAATAAPEAPIEELVLRVRLLPLRVYVDQHTLDFLSAFFTLAESSSSSS
SSSSSSSHPRDQPSEALAVLPSLAFFQSILIRPVKIKLDTQTRPLDVREV
QRGNYAELLNLCPLKNVKLQLTAVSLRGVSGWAAVGIGIRESWVRDVTQK
QIYRILMGPSAIRSMYNVGQGMADLVIVPLEQYRRDGRLLRGLRKGAIKC
LRNITIEALNASVGLTKVVASTLNDLVTIEGGREGGRERLIQPELQPKGM
REGLEHAYDSLSKGLGTAAHTIIAIPIQEMERSGPKGSMRAVIRALPIAV
VKPVVGVSEALSITLLGVRNKLDPVSRREEEELWRV*
back to top
Synonyms
Publications