NO14G00380, NO14G00380 (gene) Nannochloropsis oceanica

Overview
NameNO14G00380
Unique NameNO14G00380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3678
Alignment locationchr14:158969..162646 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:158969..162646 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002228NSK002228Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00380.1NO14G00380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00380.1NO14G00380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00380 ID=NO14G00380|Name=NO14G00380|organism=Nannochloropsis oceanica|type=gene|length=3678bp
CTACTGCTGCTGCTGCTGCTGCTGCCGTCGCCGCCTTGGCTCCACATGAA
GGCAAGGATAAGAAGGAGGAGGAGGAGCAGAGGGAGGAGGAGGAGGAGGA
AGAAGCGGTTGGGGCACGCAGGGCCCGACCGGGGAGAAGGTGGGAGGGAG
GGCGGGCTTGAAGGATGATTTGAGGCCTACTCCGACCGTCAGGGTGGAGG
TCCGGCCATTCCGCCTCCTCCTGCTCCTGCTCCTGCTCCTGCTCCTCCCC
CTCTTCCTCCTCCCCTCCCTCCTCCGCCATCTCCTCTTCAGAAGTGGTTG
AATGCTCAGTCCTCTTCGCCTTCGTATTGGTACTTACAAATGACATCCTC
CTTCCCCCATCCCATTCCCCTCCTCCTTCATCCATCTCACCCGGCGTTGA
CAATGAGGAGACCGCAGTCGTGTAGGAGGAAGCCGAGCTCCTCCGTCTCC
TTCCTCCTCCTCTCTCTCCTCCTCGTCCGCTTTTCATGCAGAGAGAGTCG
CGCATTAAAGGACGGTATTCGTGCCCATCACTTTGCCGCGGGGCACGACA
AGCGGAGGACAAACCCGAGGAAGTAGACAAAGAGGAGGGCGTACGGGAGG
AAGCAGAGGAAGGGACAGCAGCAACAGCAGCCGCAGCCGCCGTAGCAGCG
ACAACAGCAGCGGCAGGCGCTGCACGTTTGAAGAAACCAGCGGGCGGCAC
AACGTTCCAGGGAGGAGGGACGCCTCCTCCTCCTCCCCCACCTCCTCCTC
CACCACCAGCACTTTCAGCGAGACCACTTAACCCCATGCCGAGGATGCTA
CTTCTCCCACTGCTTCCCGGCCGACTTCTTTTCTTACATGGTGACAGGGA
GCTTGCCCCAAGGTAAGCCATGTTGTGATAGCCACGCACCTTTTGCGGTG
TGAAAAAGGACTCGTCGTCTTCCTCCTCCTCCTCCTCCTCGTGGTCAGAG
TGATGATGGTGGTAATGGTCATAATTAACGGCAACGCCCGCGCTGGCTGC
TGCTGGCATGGCCCCGGCAGGAGGGTGAGACATCAGAGCAGGAGGAAGGG
GGGGTCAGGATGCCTATAAGCCTCCTCTTCCCCCTCCCCGTCCCTCTCCT
CCTCCTCGTCCGAGACCTCCGCAGTGGTGTCGACCTCGTCGTCAATCAAG
CCAGGGACAGGCATGGCTTGTTTGCGTGAGGTGGCCCTCGCCCTGGTCGT
AAGCGGCGGCGGCTATAAATGGTTGGCTTCCTCAATGTCCTGTGCGGGTG
CGTGAGAGCATGTGAGACAAGGGTGTGTTTGTCAGTGTGTCATGGAAAAA
AGAGAGGGAAAGGCGCAGCACCCAGCAGCTCATCGCCGAGGATAACAAGA
AAGAAGACGGCTAGGTGCGGCAATGCCATAGCCACACGCAAGCACACCCC
AATTACAAGACCCTGTGTGGTGCGTGTGTCTTATGTTGCCGCACGGGTAG
GCGTGCAGAAATTGCGACAAATAGGAGGAGCAAGGAGCGTGGAGCGCGTC
GTTTTGGACCTCTTCCCGCGCTTCTGGTGCCTTTTTTCGTCCTGTCTACG
GACGACACGCGATGGCGAGAAACGGTGGCCCATTCCACAAAACGCAAAGA
TCACTCTTGTCCTTGCTACACCAACCCCTGACACTATACTCAAACACACA
GGGTCTTGATATTCTAGTTATCGAGGTCTTTAAGCGCGGGTTGGTGGAGT
GAGCGAGTGTAAGAAGCCGAAACCGCAGGCAAAGCATGGACCACCAGCTG
AGCAGCTCGATGTGGGGCGAGgtgagttagtaaagagtcagaaactcgta
aaacgacacgcggacatcggtgtggtatgcataatggaccaagatagatg
tataattttatgtggctgaatggctccagtccttgatgcctccacacact
gcttaagtaggcaccccttcctcgatcctctttcttctttgcactatcgg
ttcttgggatactgtgtacctgcatacacacgcacaaccccctacaaatg
tatgggtgtgcatgtcgagtataggaactctttagttaccccctgcttaa
tgttcagtcggcgcctctctctctcatttacccctctcatccctctccct
cccccgtcctcggtgcacagTTTCAGCCTTTCTCAGGCTCGTTTCTGATG
AAAGGCTACCACCCCCTTGCCGGGGGCCTGCTGGACGACTCCTCCCCTCT
CACCTGGACCAAGGTATTGGTGTACTTGAAAGAACCGAATGTGCTAGTCA
TCTGCCAGTCGAACATTGACAGAGAGGAGGAGgtgagggagggagagagg
ggggaaggatgggagggggatgtgcgaaggggaaagagagggatacagga
agtacatggacgtggcgctggatggcgcggtgaacaatattcacagcaca
caccacttaaaagagagacacatatacataaatatatatatatatgtaaa
tatcacttacaaaagacacatgctgcacacacgtggttacccacacatca
tgcaaatgagggagacacacacacctatagattcatatacatatcatttg
cacagCTGATTCAAAATGAAACAGACGCTGGCGGCGCCTCGCAACGGACG
CTACCAGACCGGgtacgtaaatcacacgaagaaggagatgccgaagaagg
aagggagggatgaagggagggaaagaaagatggaggtagggagggaaaaa
ggaagtgagggagagagccccttcccccggaggggcggaggaaagagagg
gagctctttgacgcgtgtcaagttgtgttgacatgatatttacttgtgtg
tgtgtttattttccttccttccctccctcccgccctccttccccagTCGC
GGGACGATCTGACAATACGCATCGACAGACACACCTCAGTAACTGGAGTT
ACGAAAAAAAACTACTCTACCGACCCGTCCAAGAGCATCGTCCTCGAGGC
CTTCGTCTTGGAGAAAGCAgtagggagggagggagggagagagggaagga
gggagggagaatatgtaggcttgagcaggctcttcaaaatgcgctcgaaa
taaattgagtccatcatgttttctacggacagcccagcccattccctccc
tccctccctcccttcctccctccttccctccctcccttcctccccccctt
ccctcctcccagAAGGACTGGGGTGTTCTTCTGGACGGGCTTAAATACAA
GAGATTGAAATTTGCCGTCTTGCCCTCCCAGCGACAGAAACTGGTCGACC
TCCGTACCGCCATCATCGGACTCTGTGATAAAgtgagactcttccctccc
tccctccccccctccctccctccctcccttgcttcgtcgttgccatgcct
cactttttatgtgtgcagaagtaacactgctccgtcttacctgctgcctc
cctccttcgtccgtcctctctccctccctagGCACGCGAGGTTCCTGAGG
AGGTGAGCAATGGCGGGTTATTGCATGGTATCAGGGCTAGATTAGAAGGA
GGGAGACCTACGTACACTACGATGAAATAGAGAGGGGAGGAAGGGAAGGA
GGGAGGAAAGGAGGGAGGAAATTCGGAAAAGAAAGGAGGGAGGGAGGGAG
GGAGGTAAGACGGAGCAGTGTTACTTCTGCACACATCAAAATTGAGGCAT
GGCACCGACAGAGGAAGGAAGGGAAGGA
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protein sequence of NO14G00380.1

>NO14G00380.1-protein ID=NO14G00380.1-protein|Name=NO14G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=199bp
MDHQLSSSMWGEFQPFSGSFLMKGYHPLAGGLLDDSSPLTWTKVLVYLKE
PNVLVICQSNIDREEELIQNETDAGGASQRTLPDRSRDDLTIRIDRHTSV
TGVTKKNYSTDPSKSIVLEAFVLEKAKDWGVLLDGLKYKRLKFAVLPSQR
QKLVDLRTAIIGLCDKAREVPEEVSNGGLLHGIRARLEGGRPTYTTMK*
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Synonyms
Publications