NO14G00380.1, NO14G00380.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO14G00380.1
Unique NameNO14G00380.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2480
Alignment locationchr14:158969..162646 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:158969..162646 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G00380.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO14G00380NO14G00380Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO14G00380.1NO14G00380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO14G00380.1.cds1NO14G00380.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00380.1.cds2NO14G00380.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00380.1.cds3NO14G00380.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00380.1.cds4NO14G00380.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00380.1.cds5NO14G00380.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO14G00380.1.cds6NO14G00380.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO14G00380.1 ID=NO14G00380.1|Name=NO14G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=2480bp
CTACTGCTGCTGCTGCTGCTGCTGCCGTCGCCGCCTTGGCTCCACATGAA
GGCAAGGATAAGAAGGAGGAGGAGGAGCAGAGGGAGGAGGAGGAGGAGGA
AGAAGCGGTTGGGGCACGCAGGGCCCGACCGGGGAGAAGGTGGGAGGGAG
GGCGGGCTTGAAGGATGATTTGAGGCCTACTCCGACCGTCAGGGTGGAGG
TCCGGCCATTCCGCCTCCTCCTGCTCCTGCTCCTGCTCCTGCTCCTCCCC
CTCTTCCTCCTCCCCTCCCTCCTCCGCCATCTCCTCTTCAGAAGTGGTTG
AATGCTCAGTCCTCTTCGCCTTCGTATTGGTACTTACAAATGACATCCTC
CTTCCCCCATCCCATTCCCCTCCTCCTTCATCCATCTCACCCGGCGTTGA
CAATGAGGAGACCGCAGTCGTGTAGGAGGAAGCCGAGCTCCTCCGTCTCC
TTCCTCCTCCTCTCTCTCCTCCTCGTCCGCTTTTCATGCAGAGAGAGTCG
CGCATTAAAGGACGGTATTCGTGCCCATCACTTTGCCGCGGGGCACGACA
AGCGGAGGACAAACCCGAGGAAGTAGACAAAGAGGAGGGCGTACGGGAGG
AAGCAGAGGAAGGGACAGCAGCAACAGCAGCCGCAGCCGCCGTAGCAGCG
ACAACAGCAGCGGCAGGCGCTGCACGTTTGAAGAAACCAGCGGGCGGCAC
AACGTTCCAGGGAGGAGGGACGCCTCCTCCTCCTCCCCCACCTCCTCCTC
CACCACCAGCACTTTCAGCGAGACCACTTAACCCCATGCCGAGGATGCTA
CTTCTCCCACTGCTTCCCGGCCGACTTCTTTTCTTACATGGTGACAGGGA
GCTTGCCCCAAGGTAAGCCATGTTGTGATAGCCACGCACCTTTTGCGGTG
TGAAAAAGGACTCGTCGTCTTCCTCCTCCTCCTCCTCCTCGTGGTCAGAG
TGATGATGGTGGTAATGGTCATAATTAACGGCAACGCCCGCGCTGGCTGC
TGCTGGCATGGCCCCGGCAGGAGGGTGAGACATCAGAGCAGGAGGAAGGG
GGGGTCAGGATGCCTATAAGCCTCCTCTTCCCCCTCCCCGTCCCTCTCCT
CCTCCTCGTCCGAGACCTCCGCAGTGGTGTCGACCTCGTCGTCAATCAAG
CCAGGGACAGGCATGGCTTGTTTGCGTGAGGTGGCCCTCGCCCTGGTCGT
AAGCGGCGGCGGCTATAAATGGTTGGCTTCCTCAATGTCCTGTGCGGGTG
CGTGAGAGCATGTGAGACAAGGGTGTGTTTGTCAGTGTGTCATGGAAAAA
AGAGAGGGAAAGGCGCAGCACCCAGCAGCTCATCGCCGAGGATAACAAGA
AAGAAGACGGCTAGGTGCGGCAATGCCATAGCCACACGCAAGCACACCCC
AATTACAAGACCCTGTGTGGTGCGTGTGTCTTATGTTGCCGCACGGGTAG
GCGTGCAGAAATTGCGACAAATAGGAGGAGCAAGGAGCGTGGAGCGCGTC
GTTTTGGACCTCTTCCCGCGCTTCTGGTGCCTTTTTTCGTCCTGTCTACG
GACGACACGCGATGGCGAGAAACGGTGGCCCATTCCACAAAACGCAAAGA
TCACTCTTGTCCTTGCTACACCAACCCCTGACACTATACTCAAACACACA
GGGTCTTGATATTCTAGTTATCGAGGTCTTTAAGCGCGGGTTGGTGGAGT
GAGCGAGTGTAAGAAGCCGAAACCGCAGGCAAAGCATGGACCACCAGCTG
AGCAGCTCGATGTGGGGCGAGTTTCAGCCTTTCTCAGGCTCGTTTCTGAT
GAAAGGCTACCACCCCCTTGCCGGGGGCCTGCTGGACGACTCCTCCCCTC
TCACCTGGACCAAGGTATTGGTGTACTTGAAAGAACCGAATGTGCTAGTC
ATCTGCCAGTCGAACATTGACAGAGAGGAGGAGCTGATTCAAAATGAAAC
AGACGCTGGCGGCGCCTCGCAACGGACGCTACCAGACCGGTCGCGGGACG
ATCTGACAATACGCATCGACAGACACACCTCAGTAACTGGAGTTACGAAA
AAAAACTACTCTACCGACCCGTCCAAGAGCATCGTCCTCGAGGCCTTCGT
CTTGGAGAAAGCAAAGGACTGGGGTGTTCTTCTGGACGGGCTTAAATACA
AGAGATTGAAATTTGCCGTCTTGCCCTCCCAGCGACAGAAACTGGTCGAC
CTCCGTACCGCCATCATCGGACTCTGTGATAAAGCACGCGAGGTTCCTGA
GGAGGTGAGCAATGGCGGGTTATTGCATGGTATCAGGGCTAGATTAGAAG
GAGGGAGACCTACGTACACTACGATGAAATAGAGAGGGGAGGAAGGGAAG
GAGGGAGGAAAGGAGGGAGGAAATTCGGAAAAGAAAGGAGGGAGGGAGGG
AGGGAGGTAAGACGGAGCAGTGTTACTTCTGCACACATCAAAATTGAGGC
ATGGCACCGACAGAGGAAGGAAGGGAAGGA
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protein sequence of NO14G00380.1

>NO14G00380.1-protein ID=NO14G00380.1-protein|Name=NO14G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=199bp
MDHQLSSSMWGEFQPFSGSFLMKGYHPLAGGLLDDSSPLTWTKVLVYLKE
PNVLVICQSNIDREEELIQNETDAGGASQRTLPDRSRDDLTIRIDRHTSV
TGVTKKNYSTDPSKSIVLEAFVLEKAKDWGVLLDGLKYKRLKFAVLPSQR
QKLVDLRTAIIGLCDKAREVPEEVSNGGLLHGIRARLEGGRPTYTTMK*
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mRNA from alignment at chr14:158969..162646-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO14G00380.1 ID=NO14G00380.1|Name=NO14G00380.1|organism=Nannochloropsis oceanica|type=mRNA|length=3678bp|location=Sequence derived from alignment at chr14:158969..162646- (Nannochloropsis oceanica)
CTACTGCTGCTGCTGCTGCTGCTGCCGTCGCCGCCTTGGCTCCACATGAA
GGCAAGGATAAGAAGGAGGAGGAGGAGCAGAGGGAGGAGGAGGAGGAGGA
AGAAGCGGTTGGGGCACGCAGGGCCCGACCGGGGAGAAGGTGGGAGGGAG
GGCGGGCTTGAAGGATGATTTGAGGCCTACTCCGACCGTCAGGGTGGAGG
TCCGGCCATTCCGCCTCCTCCTGCTCCTGCTCCTGCTCCTGCTCCTCCCC
CTCTTCCTCCTCCCCTCCCTCCTCCGCCATCTCCTCTTCAGAAGTGGTTG
AATGCTCAGTCCTCTTCGCCTTCGTATTGGTACTTACAAATGACATCCTC
CTTCCCCCATCCCATTCCCCTCCTCCTTCATCCATCTCACCCGGCGTTGA
CAATGAGGAGACCGCAGTCGTGTAGGAGGAAGCCGAGCTCCTCCGTCTCC
TTCCTCCTCCTCTCTCTCCTCCTCGTCCGCTTTTCATGCAGAGAGAGTCG
CGCATTAAAGGACGGTATTCGTGCCCATCACTTTGCCGCGGGGCACGACA
AGCGGAGGACAAACCCGAGGAAGTAGACAAAGAGGAGGGCGTACGGGAGG
AAGCAGAGGAAGGGACAGCAGCAACAGCAGCCGCAGCCGCCGTAGCAGCG
ACAACAGCAGCGGCAGGCGCTGCACGTTTGAAGAAACCAGCGGGCGGCAC
AACGTTCCAGGGAGGAGGGACGCCTCCTCCTCCTCCCCCACCTCCTCCTC
CACCACCAGCACTTTCAGCGAGACCACTTAACCCCATGCCGAGGATGCTA
CTTCTCCCACTGCTTCCCGGCCGACTTCTTTTCTTACATGGTGACAGGGA
GCTTGCCCCAAGGTAAGCCATGTTGTGATAGCCACGCACCTTTTGCGGTG
TGAAAAAGGACTCGTCGTCTTCCTCCTCCTCCTCCTCCTCGTGGTCAGAG
TGATGATGGTGGTAATGGTCATAATTAACGGCAACGCCCGCGCTGGCTGC
TGCTGGCATGGCCCCGGCAGGAGGGTGAGACATCAGAGCAGGAGGAAGGG
GGGGTCAGGATGCCTATAAGCCTCCTCTTCCCCCTCCCCGTCCCTCTCCT
CCTCCTCGTCCGAGACCTCCGCAGTGGTGTCGACCTCGTCGTCAATCAAG
CCAGGGACAGGCATGGCTTGTTTGCGTGAGGTGGCCCTCGCCCTGGTCGT
AAGCGGCGGCGGCTATAAATGGTTGGCTTCCTCAATGTCCTGTGCGGGTG
CGTGAGAGCATGTGAGACAAGGGTGTGTTTGTCAGTGTGTCATGGAAAAA
AGAGAGGGAAAGGCGCAGCACCCAGCAGCTCATCGCCGAGGATAACAAGA
AAGAAGACGGCTAGGTGCGGCAATGCCATAGCCACACGCAAGCACACCCC
AATTACAAGACCCTGTGTGGTGCGTGTGTCTTATGTTGCCGCACGGGTAG
GCGTGCAGAAATTGCGACAAATAGGAGGAGCAAGGAGCGTGGAGCGCGTC
GTTTTGGACCTCTTCCCGCGCTTCTGGTGCCTTTTTTCGTCCTGTCTACG
GACGACACGCGATGGCGAGAAACGGTGGCCCATTCCACAAAACGCAAAGA
TCACTCTTGTCCTTGCTACACCAACCCCTGACACTATACTCAAACACACA
GGGTCTTGATATTCTAGTTATCGAGGTCTTTAAGCGCGGGTTGGTGGAGT
GAGCGAGTGTAAGAAGCCGAAACCGCAGGCAAAGCATGGACCACCAGCTG
AGCAGCTCGATGTGGGGCGAGGTGAGTTAGTAAAGAGTCAGAAACTCGTA
AAACGACACGCGGACATCGGTGTGGTATGCATAATGGACCAAGATAGATG
TATAATTTTATGTGGCTGAATGGCTCCAGTCCTTGATGCCTCCACACACT
GCTTAAGTAGGCACCCCTTCCTCGATCCTCTTTCTTCTTTGCACTATCGG
TTCTTGGGATACTGTGTACCTGCATACACACGCACAACCCCCTACAAATG
TATGGGTGTGCATGTCGAGTATAGGAACTCTTTAGTTACCCCCTGCTTAA
TGTTCAGTCGGCGCCTCTCTCTCTCATTTACCCCTCTCATCCCTCTCCCT
CCCCCGTCCTCGGTGCACAGTTTCAGCCTTTCTCAGGCTCGTTTCTGATG
AAAGGCTACCACCCCCTTGCCGGGGGCCTGCTGGACGACTCCTCCCCTCT
CACCTGGACCAAGGTATTGGTGTACTTGAAAGAACCGAATGTGCTAGTCA
TCTGCCAGTCGAACATTGACAGAGAGGAGGAGGTGAGGGAGGGAGAGAGG
GGGGAAGGATGGGAGGGGGATGTGCGAAGGGGAAAGAGAGGGATACAGGA
AGTACATGGACGTGGCGCTGGATGGCGCGGTGAACAATATTCACAGCACA
CACCACTTAAAAGAGAGACACATATACATAAATATATATATATATGTAAA
TATCACTTACAAAAGACACATGCTGCACACACGTGGTTACCCACACATCA
TGCAAATGAGGGAGACACACACACCTATAGATTCATATACATATCATTTG
CACAGCTGATTCAAAATGAAACAGACGCTGGCGGCGCCTCGCAACGGACG
CTACCAGACCGGGTACGTAAATCACACGAAGAAGGAGATGCCGAAGAAGG
AAGGGAGGGATGAAGGGAGGGAAAGAAAGATGGAGGTAGGGAGGGAAAAA
GGAAGTGAGGGAGAGAGCCCCTTCCCCCGGAGGGGCGGAGGAAAGAGAGG
GAGCTCTTTGACGCGTGTCAAGTTGTGTTGACATGATATTTACTTGTGTG
TGTGTTTATTTTCCTTCCTTCCCTCCCTCCCGCCCTCCTTCCCCAGTCGC
GGGACGATCTGACAATACGCATCGACAGACACACCTCAGTAACTGGAGTT
ACGAAAAAAAACTACTCTACCGACCCGTCCAAGAGCATCGTCCTCGAGGC
CTTCGTCTTGGAGAAAGCAGTAGGGAGGGAGGGAGGGAGAGAGGGAAGGA
GGGAGGGAGAATATGTAGGCTTGAGCAGGCTCTTCAAAATGCGCTCGAAA
TAAATTGAGTCCATCATGTTTTCTACGGACAGCCCAGCCCATTCCCTCCC
TCCCTCCCTCCCTTCCTCCCTCCTTCCCTCCCTCCCTTCCTCCCCCCCTT
CCCTCCTCCCAGAAGGACTGGGGTGTTCTTCTGGACGGGCTTAAATACAA
GAGATTGAAATTTGCCGTCTTGCCCTCCCAGCGACAGAAACTGGTCGACC
TCCGTACCGCCATCATCGGACTCTGTGATAAAGTGAGACTCTTCCCTCCC
TCCCTCCCCCCCTCCCTCCCTCCCTCCCTTGCTTCGTCGTTGCCATGCCT
CACTTTTTATGTGTGCAGAAGTAACACTGCTCCGTCTTACCTGCTGCCTC
CCTCCTTCGTCCGTCCTCTCTCCCTCCCTAGGCACGCGAGGTTCCTGAGG
AGGTGAGCAATGGCGGGTTATTGCATGGTATCAGGGCTAGATTAGAAGGA
GGGAGACCTACGTACACTACGATGAAATAGAGAGGGGAGGAAGGGAAGGA
GGGAGGAAAGGAGGGAGGAAATTCGGAAAAGAAAGGAGGGAGGGAGGGAG
GGAGGTAAGACGGAGCAGTGTTACTTCTGCACACATCAAAATTGAGGCAT
GGCACCGACAGAGGAAGGAAGGGAAGGA
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Coding sequence (CDS) from alignment at chr14:158969..162646-

>NO14G00380.1 ID=NO14G00380.1|Name=NO14G00380.1|organism=Nannochloropsis oceanica|type=CDS|length=597bp|location=Sequence derived from alignment at chr14:158969..162646- (Nannochloropsis oceanica)
ATGGACCACCAGCTGAGCAGCTCGATGTGGGGCGAGTTTCAGCCTTTCTC
AGGCTCGTTTCTGATGAAAGGCTACCACCCCCTTGCCGGGGGCCTGCTGG
ACGACTCCTCCCCTCTCACCTGGACCAAGGTATTGGTGTACTTGAAAGAA
CCGAATGTGCTAGTCATCTGCCAGTCGAACATTGACAGAGAGGAGGAGCT
GATTCAAAATGAAACAGACGCTGGCGGCGCCTCGCAACGGACGCTACCAG
ACCGGTCGCGGGACGATCTGACAATACGCATCGACAGACACACCTCAGTA
ACTGGAGTTACGAAAAAAAACTACTCTACCGACCCGTCCAAGAGCATCGT
CCTCGAGGCCTTCGTCTTGGAGAAAGCAAAGGACTGGGGTGTTCTTCTGG
ACGGGCTTAAATACAAGAGATTGAAATTTGCCGTCTTGCCCTCCCAGCGA
CAGAAACTGGTCGACCTCCGTACCGCCATCATCGGACTCTGTGATAAAGC
ACGCGAGGTTCCTGAGGAGGTGAGCAATGGCGGGTTATTGCATGGTATCA
GGGCTAGATTAGAAGGAGGGAGACCTACGTACACTACGATGAAATAG
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Synonyms
Publications