NO14G00140, NO14G00140 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G00140 vs. NCBI_GenBank
Match: XP_009033202.1 (hypothetical protein AURANDRAFT_58667 [Aureococcus anophagefferens] >EGB12114.1 hypothetical protein AURANDRAFT_58667 [Aureococcus anophagefferens]) HSP 1 Score: 114.4 bits (285), Expect = 4.200e-22 Identity = 59/135 (43.70%), Postives = 90/135 (66.67%), Query Frame = 0 Query: 34 VDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V+ ++ S+L+K+M+PE E E+ ++PL V VL KVIEF + Y +PM +IEKPL + ++VQ Y Y++ + +++F++I AAN++ I+PLL L+ A VA ++KG T EE +K F I NDFTPEE Sbjct: 10 VEVKVAKMSELVKTMIPEEADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVD-VDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEE 143
BLAST of NO14G00140 vs. NCBI_GenBank
Match: XP_002294707.1 (hypothetical protein THAPSDRAFT_38460, partial [Thalassiosira pseudonana CCMP1335] >EED88067.1 hypothetical protein THAPSDRAFT_38460, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 111.7 bits (278), Expect = 2.700e-21 Identity = 57/136 (41.91%), Postives = 90/136 (66.18%), Query Frame = 0 Query: 33 PVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 PVD + S+L+K ML + + E+ ++PL V VL+KVIEF + + ++PM +IEKPL + ++VQ Y +++N + ++F++I AAN++ I+PLL L+ A VA ++KG T EE +K F I NDF+PEE Sbjct: 8 PVDIEVARMSELVKGMLEDDADDDEEATEIPLPNVKSTVLKKVIEFCKHHRSEPMTEIEKPLKSAAMAEVVQKWYADFVN-VEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIANDFSPEE 142
BLAST of NO14G00140 vs. NCBI_GenBank
Match: EWM24786.1 (glycoprotein fp21 [Nannochloropsis gaditana]) HSP 1 Score: 111.3 bits (277), Expect = 3.600e-21 Identity = 61/139 (43.88%), Postives = 89/139 (64.03%), Query Frame = 0 Query: 30 LDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 LD PV+A +LLPS LL ML ED+ + L V+K E V+ FL+++ A P+ I KP+ + L ++VQ +Y E+I +L Y+ + Q+++ A+FL ++PLL LSLA V F+LK +EEFK+LF ND T EE Sbjct: 13 LDAPVEAALLLPSTLLAGMLEAEEDCGEDERTLELPSVEKTAFEYVMRFLRVHAATPLQDIPKPILENSLGEIVQKEYSEFIESLPYRDLVQVMELAHFLVLDPLLRLSLARVHFILKATPLEEFKRLFLFQNDLTQEE 151
BLAST of NO14G00140 vs. NCBI_GenBank
Match: CBJ48672.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 109.8 bits (273), Expect = 1.000e-20 Identity = 66/170 (38.82%), Postives = 102/170 (60.00%), Query Frame = 0 Query: 1 MEKSSEMVNEKEGEGAPQKFVTLQARDGALDEPVDARILLP--SDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 +E+ S+ + E + V L +++G E D ++ + S+L+K+M+ E E D ++PL V +VL KVIEF Y DPM +IEKPL + D+VQ Y +++ + + +F++I AAN++ I+PLL L+ A VA ++KG T EE +K F I NDFTPEE Sbjct: 4 LEEKSQAADAPADETEDTRSVHLVSQEG---ESFDIKVSVAKMSNLVKTMIDEDAEEDGDAQEIPLPNVKASVLSKVIEFCAHYKEDPMNEIEKPLKSANMHDVVQEWYAKFVE-VQQETLFELILAANYMDIKPLLDLTCATVASMIKGKTAEEIRKTFNIVNDFTPEE 169
BLAST of NO14G00140 vs. NCBI_GenBank
Match: GAX21881.1 (S-phase kinase-associated protein 1 [Fistulifera solaris] >GAX13788.1 S-phase kinase-associated protein 1 [Fistulifera solaris]) HSP 1 Score: 107.1 bits (266), Expect = 6.700e-20 Identity = 62/149 (41.61%), Postives = 96/149 (64.43%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIED-DFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L ++DG PV + S+L++SM+ E +E E+ ++PL V VL+KVIEF Q + A+PM +IEKPL K+ D+VQ Y +++ L ++F++I AAN++ I+PLL L+ A VA ++KG + E+ + F I NDF+PEE Sbjct: 8 VNLISKDGD-SFPVSIGVAKMSELVRSMMDEDENEDENSSMEIPLPNVKSEVLQKVIEFCQHHLAEPMNEIEKPLKSQKMSDVVQKWYADFVE-LEQVLLFELILAANYMDIKPLLDLTCATVASMIKGKSPEDIRATFNITNDFSPEE 154
BLAST of NO14G00140 vs. NCBI_GenBank
Match: EWM25403.1 (glycoprotein fp21 [Nannochloropsis gaditana]) HSP 1 Score: 105.9 bits (263), Expect = 1.500e-19 Identity = 61/150 (40.67%), Postives = 95/150 (63.33%), Query Frame = 0 Query: 19 KFVTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 K V L +++G E V+ + S+L+K+MLP+ + + ++PL V VL KVIEF + + DPM IEKPL + ++VQ Y ++N + +++F++I AAN++ I+PLL L+ A VA ++KG T EE ++ F I NDFTPEE Sbjct: 60 KVVHLVSQEGDQYE-VEVSVCKMSELVKTMLPDD-DDSSETQEIPLPNVKNNVLAKVIEFCKHHKEDPMNDIEKPLKSANMHEVVQDWYANFVN-VDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRRTFNITNDFTPEE 206
BLAST of NO14G00140 vs. NCBI_GenBank
Match: XP_002176583.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51046.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 101.3 bits (251), Expect = 3.700e-18 Identity = 57/148 (38.51%), Postives = 91/148 (61.49%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L ++DG V + S+L+K M+ E + D ++PL V VL KVIEF + + +PM +IEKPL + D+VQ Y ++++ + ++F++I AAN++ I+PLL L+ A VA ++KG T E+ ++ F I NDF+PEE Sbjct: 10 VNLISKDGD-SFSVPLAVAKMSELVKGMIDEDAEDEGDKIEIPLPNVKSQVLNKVIEFCEHHLQEPMTEIEKPLKSQVMADVVQKWYADFVD-VEQVLLFELILAANYMDIKPLLDLTCATVAGMIKGKTPEDIRQTFGIQNDFSPEE 155
BLAST of NO14G00140 vs. NCBI_GenBank
Match: PCI31026.1 (hypothetical protein COB52_00540 [Candidatus Kaiserbacteria bacterium]) HSP 1 Score: 98.6 bits (244), Expect = 2.400e-17 Identity = 57/146 (39.04%), Postives = 91/146 (62.33%), Query Frame = 0 Query: 23 LQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 L ++G + E V+ I++ S L++SM+ +S + D +PL V KA+L K+I+F + +P +IEKPL L D+V Y ++ L +++F++I AAN++ I+ LL LS A VA ++KG ++ E +K F I NDFTPEE Sbjct: 7 LSVQEGEIIE-VEKDIIIKSSLVQSMIDDS---SDADEVIPLPNVKKAILTKIIDFCKYSKDNPTPEIEKPLRSSNLADVVPQWYANFVE-LEQEVLFELILAANYMDIKSLLELSCAKVASMIKGKSIPEIRKFFNIENDFTPEE 147
BLAST of NO14G00140 vs. NCBI_GenBank
Match: CDW87582.1 (glycoprotein fp21 [Stylonychia lemnae]) HSP 1 Score: 96.3 bits (238), Expect = 1.200e-16 Identity = 58/148 (39.19%), Postives = 88/148 (59.46%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L +G + E VD + S L+K M+ +S E E +PL V + +L+K+I+F + +IEKPL L D+ P Y E++N L +++F++I AAN+L I+PLL L+ A VA ++K ++ E +K F I NDFTPEE Sbjct: 4 VKLVTSEGEIVE-VDIEVASKSVLIKGMIDDSGVEEE----IPLPNVKRNILQKIIDFCTYIKDNSPPEIEKPLKSNNLNDVTTPWYAEFVN-LDQEVLFELILAANYLDIKPLLELACAKVASLIKNRSIPEIRKFFNIENDFTPEE 145
BLAST of NO14G00140 vs. NCBI_GenBank
Match: OQR91138.1 (S-phase kinase-associated protein 1A [Thraustotheca clavata]) HSP 1 Score: 96.3 bits (238), Expect = 1.200e-16 Identity = 58/148 (39.19%), Postives = 90/148 (60.81%), Query Frame = 0 Query: 21 VTLQARDGALDEPVDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEE 169 V L ++DG E V + S+L+K+M+ + + +D ++PL V VL KVIEF + +H +PM IEKPL + D+V +++ + ++F++I AAN++ I+ LL LS A VA ++KG T EE ++ F I NDFTPEE Sbjct: 9 VNLVSQDGDSFE-VPRSVACTSELVKTMVADEQDD-DDVQEIPLPNVKSTVLSKVIEFCRHHHNNPMQDIEKPLRSSDMHDVVSEWDANFVD-IEQDLLFELILAANYMDIKSLLDLSCAKVASMIKGKTPEEIRETFNITNDFTPEE 153 The following BLAST results are available for this feature:
BLAST of NO14G00140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G00140 ID=NO14G00140|Name=NO14G00140|organism=Nannochloropsis oceanica|type=gene|length=3244bpback to top protein sequence of NO14G00140.1 >NO14G00140.1-protein ID=NO14G00140.1-protein|Name=NO14G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=205bpback to top Synonyms
Publications
|