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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:45921..49164 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G00140.1 vs.
Match: XP_009033202.1 (hypothetical protein AURANDRAFT_58667 [Aureococcus anophagefferens]; EGB12114.1 hypothetical protein AURANDRAFT_58667 [Aureococcus anophagefferens]) HSP 1 Score: 119.8 bits (299), Expect = 1.000e-23 Identity = 63/142 (44.37%), Postives = 94/142 (66.20%), Query Frame = 0
Query: 34 VDARILLPSDLLKSMLPESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLEDLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPTVEEFKKLFTIHNDFTPEEEAIFRRE 176
V+ ++ S+L+K+M+PE E E+ ++PL V VL KVIEF + Y +PM +IEKPL + ++VQ Y Y++ + +++F++I AAN++ I+PLL L+ A VA ++KG T EE +K F I NDFTPEEEA R E
Sbjct: 10 VEVKVAKMSELVKTMIPEEADEEEEAQEIPLPNVKSHVLAKVIEFCRRYAEEPMSEIEKPLKSANMHEVVQEWYANYVD-VDQELLFELILAANYMDIKPLLDLTCATVASMIKGKTPEEIRKTFNIVNDFTPEEEAQVREE 150
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G00140.1 ID=NO14G00140.1|Name=NO14G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=1836bp GATTTATTGCTCGTTAAGTATCCACATATCTCTCTTACACGAGCCTTGTT GTGTATCCAAAGAGGGGCCGCTCAAGACTGGCGCAGGTGGTGTGGGTACG CGTCCAGAGGAGCAAAAATCAAAAGAAGTCCATTATCCATTATCAGTGGG TGTTTCTTCTATAGAGCATACCCCACCTATCCACAGCATGCACACTCATG CAGGCTTGCGACAGCAGGACCATGCATGCAGGTACAAGGAAAGTGTTGGT AAAGTGCCGCTCTACCCTTGTCATATGACACAACACACGGCCAGCTCCCC GTCCTCATCCTCCTCCTCCTTTCTCATGCTCCCCATCTCCCCTCAAGCAC ATACACACACAAACACCTCGCGCACAGACCTCCCCAGCTGCGACACCACA CCGCACCTCAAATAAGCAAGCAAGCAGAATGGAGAAATCCTCCGAAATGG TGAATGAGAAGGAGGGAGAGGGCGCCCCGCAGAAGTTTGTGACCTTACAG GCTCGAGATGGGGCATTGGATGAGCCCGTGGATGCCCGCATCCTTTTGCC ATCGGACCTGTTGAAAAGCATGCTGCCCGAGTCGTTGTCGGAAATCGAGG ATGATTTCCAAGTGCCGCTGCAGGGGGTCGACAAGGCCGTCCTGGAGAAG GTGATTGAGTTCTTGCAGCTCTACCACGCGGATCCCATGTGCAAGATCGA GAAGCCCTTAAACAAGCCCAAGCTTGAGGATCTAGTCCAGCCGCAGTACG TCGAGTACATCAACGCCCTCCACTACAAGATCGTCTTCCAGATCATCGAC GCGGCAAATTTTCTGGGCATCGAGCCCCTCCTCTCCCTCTCCCTCGCCTG GGTCGCGTTTGTCCTAAAGGGCCCCACGGTGGAGGAGTTCAAGAAGCTCT TCACGATCCACAACGACTTCACGCCCGAGGAGGAGGCCATCTTCCGCCGG GAGTATCTGTTGCCACGCCGGAATCGGGCAGGTGGGGATGGAGGGGCGGG GGGAGGGGCGGCAGGGGGCAGTGGGAGCAGCACCACCGCGTGAAGAGAGA ATAAAGGTGGAGAGGTGGGGGAAGAGGGAATGTGAATTTGCAAGGGGAGG GAGGGAGCGCTTGAGGGAAGGTGGGAGAATTTGGCGGAGATGTGCATATG TCTAGATGAAACGTGTTGGGGAGGAAGAATGGCATGCTGGAGGGATGCTT ACTCTCCTTATGGCAAGGGAGGAGAGAGGAAGGAGGGAGGGAGGAAGAGG GAGAGAGAGAGAGGGAGGGGGCGATGTATGTTTAGGAGAAAGAGAGGGAG GAGGAGAAGGAGAATCAGTAGGAGAAGAAGGAAAACAAGGAGGGTGAAGG GAGAGGGCTGATGGTATTGAGGGAGGAGGAAAGTGAAAACAATGATCGGA ATGGCAATAGTCATGGTAGATGACGTCTCTGCCACCCCTGTTGCCCTCTT TGTGCGTCGAAAGCAAGGAGGGAGGCATGCACACTGTAGCAAGCCATATG AAAAATGAAGAAGAAAAAGAAGGAAATAGAGCAGGACAAGAGTGGACGCT GGAGGAGAAGAAAAAAATAAAAAAGAAGAAAAAGAAGCAGAAAAGAAGAA ATACAATTATAAGAAAAAGAGGAAGTACAAGACGAAGAGAGTGGAATAGA AGACTAAAGAGAAGATTAAAAAAAAAAGAACTGCAATTAACTCAAATATT ATTAATTATCATGAAGCCTCTTGCCCCTTACGCCTCATTCTCTATACAGT TTTCCCCCCGGCTCTGCTCAGCTTCCCCCCCTCTTTTTGTCCTCCTTGCC TTTGTGGTCTGTTTAGTTTTTCCAGGTCAGGGGAAG back to topprotein sequence of NO14G00140.1 >NO14G00140.1-protein ID=NO14G00140.1-protein|Name=NO14G00140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=205bp MEKSSEMVNEKEGEGAPQKFVTLQARDGALDEPVDARILLPSDLLKSMLP ESLSEIEDDFQVPLQGVDKAVLEKVIEFLQLYHADPMCKIEKPLNKPKLE DLVQPQYVEYINALHYKIVFQIIDAANFLGIEPLLSLSLAWVAFVLKGPT VEEFKKLFTIHNDFTPEEEAIFRREYLLPRRNRAGGDGGAGGGAAGGSGS STTA* back to topmRNA from alignment at chr14:45921..49164- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G00140.1 ID=NO14G00140.1|Name=NO14G00140.1|organism=Nannochloropsis oceanica|type=mRNA|length=3244bp|location=Sequence derived from alignment at chr14:45921..49164- (Nannochloropsis oceanica) GATTTATTGCTCGTTAAGTATCCACATATCTCTCTTACACGAGCCTTGTT
GTGTATCCAAAGAGGGGCCGCTCAAGACTGGCGCAGGTGGTGTGGGTACG
CGTCCAGAGGAGCAAAAATCAAAAGAAGTCCATTATCCATTATCAGTGGG
TGTTTCTTCTATAGAGCATACCCCACCTATCCACAGCATGCACACTCATG
CAGGCTTGCGACAGCAGGACCATGCATGCAGGTACAAGGAAAGTGTTGGT
AAAGTGCCGCTCTACCCTTGTCATATGACACAACACACGGCCAGCTCCCC
GTCCTCATCCTCCTCCTCCTTTCTCATGCTCCCCATCTCCCCTCAAGCAC
ATACACACACAAACACCTCGCGCACAGACCTCCCCAGCTGCGACACCACA
CCGCACCTCAAATAAGCAAGCAAGCAGAATGGAGAAATCCTCCGAAATGG
TGAATGAGAAGGAGGGAGAGGGCGCCCCGCAGAAGTTTGTGACCTTACAG
GCTCGAGATGGGGCATTGGATGAGCCCGTGGATGCCCGCATCCTTTTGCC
ATCGGACCTGTTGAAAAGCATGCTGCCCGAGTCGTGTAAGGAGGGGAGGG
AAGATGGAGGGGGGGGGTAGAGGGAGGGAGCGTAGGCGTGTTGTGCTTGT
GATGTTCTTGGTTTGAGCCGGAACGTGCGATGGGGAAGTAGGAGGAGAGG
AGGAGAGGAGAGAGAGAGGGGGGAAGGAGGACAGCAGGAAGGGAGGGTTG
GAGAAAGAAAGGGTTGGAAAAGAGGGTTGTCGCAACGCTCCGTTGATCTG
GTGGTGGTCGGTGGTGTGGTGGTATCGATGCTGGTAGTCGTAGTGCTGGT
GTACGCACGAGCTCTTTTTGTGAGCATCCGACCGTCCATTTCCTCAACCC
TTTCCTCACCCCTATTCCCTCCACCTTTCCCTCCCCTGCTGGACAGTGTC
GGAAATCGAGGATGATTTCCAAGTGCCGCTGCAGGGGGTCGACAAGGCCG
TCCTGGAGAAGGTACGGAGGGAGGAAGGGAGGGAGGGGGGGAGGAAAAAG
AGGACGTGTAATGAAAAGAATGAATGCCAGCATGTCACACCCGTGTGGCT
TTCCGACCTACACGTCCCTCCCTCCCTCCCTTCCAGGTGATTGAGTTCTT
GCAGCTCTACCACGCGGATCCCATGTGCAAGATCGAGAAGGTGCCCAGGG
AGGGAGGGAGGGAGGGAGGGGGGGAGGGAGGGGGGAAAGGAGGGTAGGAG
GGAGAAGCGGGGCCTACAAGCCAGCCGCCAGCCGAAGGAATAATTCACAA
TGATGCTTTCCTCCCTCCCCCTAGCCCTTAAACAAGCCCAAGCTTGAGGA
TCTAGTCCAGCCGCAGTACGTCGAGTACATCAACGCCCTCCACTACAAGA
TCGTCTTCCAGATCATCGACGCGGTAAGCATCCCTCCCTCCCTCCGTCCC
TCCTTCCCTCCCTCCCTCCCTTCCTCCCTGCCTTCCTCCCTCCATCCCTC
TGTTTCCTTCTCCCTCATCACCTATTCATAAATCCTTGTCTCCTGTTTCT
CCCTCCCTCCCTCCCTCCCTCCCTCCGATTTCCTTCCTCCCTCCTCACCT
GTTTATAAATTCTTGCGTCTTCCGTCTCTCCTTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCTCTCCCTCCCACAGCGCACTTTCTCCTCTCCATTCGCC
CCTGATCACTCATCGCACTACCCTCCCTCCCTCCCTCCTTCCCCCCTTCC
CCCCCTCCCTCCCTCATGCAGGCAAATTTTCTGGGCATCGAGCCCCTCCT
CTCCCTCTCCCTCGCCTGGGTCGCGTTTGTCCTAAAGGGTGAGTGGGCGA
GGGAGGGAGGGAGGGAGGGAGGGAGGAAAGTCTAGGAAGGAAATGCCTTT
ACTGCGGGCACACGTGTCCTGCCACCCTGCATCTCCTCTGCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCCCTTTTTCCCTCCCTCCTTCTTTGCACGC
TCTTCGGTATTTGCAACCAAGGCCAGGAAGTCAGCCCCTACCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTGCAGGCCCCACGGTGGAGGAGTTCA
AGAAGCTCTTCACGATCCACAACGACTTCACGCCCGAGGTAGGGAGGGAG
GGCGGGGGAAAAGGAAGAAGAGAGAGAAGGAGGAGAAAAAGAGGACGATT
GAGAAGGAAACGAGGGTGGAAGAGGGCAAGAGGGAGGGGGAGACTTGTTT
CAAAAGGGGAAGATCCATCCCAACAGCGACGCCCACTCCCATGCCCTCCC
TCTCTCCCTCCTTCCCTCCCTCCCTCCCCAACTCCAGGAGGAGGCCATCT
TCCGCCGGGAGTATCTGTTGCCACGCCGGAATCGGGCAGGTGGGGATGGA
GGGGCGGGGGGAGGGGCGGCAGGGGGCAGTGGGAGCAGCACCACCGCGTG
AAGAGAGAATAAAGGTGGAGAGGTGGGGGAAGAGGGAATGTGAATTTGCA
AGGGGAGGGAGGGAGCGCTTGAGGGAAGGTGGGAGAATTTGGCGGAGATG
TGCATATGTCTAGATGAAACGTGTTGGGGAGGAAGAATGGCATGCTGGAG
GGATGCTTACTCTCCTTATGGCAAGGGAGGAGAGAGGAAGGAGGGAGGGA
GGAAGAGGGAGAGAGAGAGAGGGAGGGGGCGATGTATGTTTAGGAGAAAG
AGAGGGAGGAGGAGAAGGAGAATCAGTAGGAGAAGAAGGAAAACAAGGAG
GGTGAAGGGAGAGGGCTGATGGTATTGAGGGAGGAGGAAAGTGAAAACAA
TGATCGGAATGGCAATAGTCATGGTAGATGACGTCTCTGCCACCCCTGTT
GCCCTCTTTGTGCGTCGAAAGCAAGGAGGGAGGCATGCACACTGTAGCAA
GCCATATGAAAAATGAAGAAGAAAAAGAAGGAAATAGAGCAGGACAAGAG
TGGACGCTGGAGGAGAAGAAAAAAATAAAAAAGAAGAAAAAGAAGCAGAA
AAGAAGAAATACAATTATAAGAAAAAGAGGAAGTACAAGACGAAGAGAGT
GGAATAGAAGACTAAAGAGAAGATTAAAAAAAAAAGAACTGCAATTAACT
CAAATATTATTAATTATCATGAAGCCTCTTGCCCCTTACGCCTCATTCTC
TATACAGTTTTCCCCCCGGCTCTGCTCAGCTTCCCCCCCTCTTTTTGTCC
TCCTTGCCTTTGTGGTCTGTTTAGTTTTTCCAGGTCAGGGGAAG back to topCoding sequence (CDS) from alignment at chr14:45921..49164- >NO14G00140.1 ID=NO14G00140.1|Name=NO14G00140.1|organism=Nannochloropsis oceanica|type=CDS|length=615bp|location=Sequence derived from alignment at chr14:45921..49164- (Nannochloropsis oceanica) ATGGAGAAATCCTCCGAAATGGTGAATGAGAAGGAGGGAGAGGGCGCCCC GCAGAAGTTTGTGACCTTACAGGCTCGAGATGGGGCATTGGATGAGCCCG TGGATGCCCGCATCCTTTTGCCATCGGACCTGTTGAAAAGCATGCTGCCC GAGTCGTTGTCGGAAATCGAGGATGATTTCCAAGTGCCGCTGCAGGGGGT CGACAAGGCCGTCCTGGAGAAGGTGATTGAGTTCTTGCAGCTCTACCACG CGGATCCCATGTGCAAGATCGAGAAGCCCTTAAACAAGCCCAAGCTTGAG GATCTAGTCCAGCCGCAGTACGTCGAGTACATCAACGCCCTCCACTACAA GATCGTCTTCCAGATCATCGACGCGGCAAATTTTCTGGGCATCGAGCCCC TCCTCTCCCTCTCCCTCGCCTGGGTCGCGTTTGTCCTAAAGGGCCCCACG GTGGAGGAGTTCAAGAAGCTCTTCACGATCCACAACGACTTCACGCCCGA GGAGGAGGCCATCTTCCGCCGGGAGTATCTGTTGCCACGCCGGAATCGGG CAGGTGGGGATGGAGGGGCGGGGGGAGGGGCGGCAGGGGGCAGTGGGAGC AGCACCACCGCGTGA back to top
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