NO14G00030, NO14G00030 (gene) Nannochloropsis oceanica

Overview
NameNO14G00030
Unique NameNO14G00030
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2588
Alignment locationchr14:6062..8649 -

Link to JBrowse

Properties
Property NameValue
DescriptionAnkyrin repeat domain-containing protein 65
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:6062..8649 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
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BLAST of NO14G00030 vs. NCBI_GenBank
Match: EWM24820.1 (hypothetical protein Naga_100294g13 [Nannochloropsis gaditana])

HSP 1 Score: 78.6 bits (192), Expect = 6.500e-11
Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 0 
Query:  456 YSECKRVGKVINQGSKK----GEVENLLIMEKVNEVARLVVATLPDDLFVELAGFMKLPWDKDEEDLG 520
            YSE  RVG  IN+G KK    GE +N   M+K+ E+A LVVATLPDDLFVELAGFM+LPWD+DE + G
Sbjct:  103 YSESGRVGG-INEGLKKYEKEGEEDNRKAMKKMGEMAHLVVATLPDDLFVELAGFMRLPWDEDEGEEG 169
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BLAST of NO14G00030 vs. NCBI_GenBank
Match: EWM20383.1 (hypothetical protein Naga_100448g7 [Nannochloropsis gaditana])

HSP 1 Score: 77.0 bits (188), Expect = 1.900e-10
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0 
Query:  456 YSECKRVGKVINQGSKK----GEVENLLIMEKVNEVARLVVATLPDDLFVELAGFMKLPWDKDEEDLG 520
            YSE  RVG  IN+G KK    GE +N   M+K+ E A LVVATLPDDLFVELAGFM+LPWD+DE + G
Sbjct:  170 YSESGRVGG-INEGLKKYEKEGEEDNRKAMKKMGEGAHLVVATLPDDLFVELAGFMRLPWDEDEGEEG 236
The following BLAST results are available for this feature:
BLAST of NO14G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM24820.16.500e-1163.24hypothetical protein Naga_100294g13 [Nannochlorops... [more]
EWM20383.11.900e-1063.24hypothetical protein Naga_100448g7 [Nannochloropsi... [more]
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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G00030.2NO14G00030.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G00030.1NO14G00030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G00030.2NO14G00030.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G00030.1NO14G00030.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G00030 ID=NO14G00030|Name=NO14G00030|organism=Nannochloropsis oceanica|type=gene|length=2588bp
TGTTTGTGTCGATTCCCTTGGAACTTAGAGAACAGAGTAGAATGGCAGCT
GGCCAAGAGAGAGTGTGCACGCCATGCCTTCCATGCACACCCTTGCACTT
GCCTGCGTCATGACATTCACATTTGGTCACCAAAGCAGACGCTGAATGAT
GAGCCCAAAGCATTATAGTCACCCACGCTTACCCGTCGACAATCTCTCCC
GCTAATGAACGCAACCACAGGCGGACACACTCCGAGTTGTTGCTTGGTTT
TTGTCGCTTCTGCGTCAGACGCGACGCGCGCGGACAAGAGTGTGAAGCGC
CGCCCCGGTCGTGTGTTGTTGTGATAGCCAACCACACTCTCTGCGTTGCC
GTGCCCAGCTATCAAAGAGATTCAAGAAGgtatgtgtacacatggatgcg
tcagtagtgtgctggtgattgagttggagtgagtgcttgcttcatgtctt
caagaacaagaaagtctgccagacgtctcttcaaaaatcacttactctct
tggttcctaccaccaccatccatcaacaccttcatttccataaaatcact
cttagTGGAATTCAGCATGCCGCCTGAATTCTCCAGGGGGCACTTGGGCC
AGGAGAAACGACGGGCTATCTTCCATTATTGCTGGCCTGCTCACCAAGCT
ATTTTTTGTCTCGTCTCACCTCAACGCCCCCCGCATCCATTCCTCAACCC
ACCAGAAATGCTGCTACGACCCTTCCACAAAGACCAGACGGCCCGCCTCG
TGGAAGCCTGCCGGATCAATGACGTGGTCTCCCTCGCCGCCATGTTGGCC
GAAGACCCCTCTCTCCTTTCTTACGAGAGCCAGCCCAAAGAGCGCAATCT
CCTCCTCCTGGCCACGCGAGCCGGTAGCCTTGACGTTGTCCACTGGCTCC
TACTTCACCATGGCACAGCCCTTCCCCTCTCCGTCCTTCCTTCCTCCTTT
TCCTCCTCCTCCTCCTTCTCTTCCTCTTCCCCCCCCCGCCTCATCAATAT
CGACAGCCAGGATCGAGAGGGGAAAAGCGCCTTGAATCTGGCTTGTGGCT
TCGTAGGCTGTCCGCGGTTGGTGTCATTGCTACTCGCGTATGGGGCAGAT
GCCACGCAGGCCGATGCGAGAGGCCTCACCCCTTTGCTCACGGCTGCGTG
GCAAGGACAGAGGGCGGCTGTGGAGGCACTTCTGGAGTGGCACCGGAAGA
AGAAGGAGGAGGTAGAGCAGAGAGGAGTCAGAGGCGAAACGATTGAGGCC
AGATTGAATCAGCAGATGTTGTCATCATTCCCGTATTCTGCTCCGCACGA
AGGAAACCTGGTAGAAACCCACGGCCAAAAGAGGGGAAGACAAAGCTCAT
TCCCCTCCCTCCCCCCTCTTTCACTCCTTCTCTCCCAAACTGATGGACGC
GGCCGCTCAGCGCTGTACCTGTCTGCGGCCTACGGCCACAATGCCGTGGT
GTCCCTCTTGCTGGCAATGGGCGCCGACCCGAGGGTGCGGTCGAAGGAAG
GGAAGACGGCGAGGGACAAGGCGGAGGCTCGGGGAGAGAAGGAGGTTGCA
GGGCTGCTGAAGCAGTACGAAGAAGAGCCAGGCAGGATAAGAATGCTTTG
TGGAATGAGGGCGAGGGAGGGAAGGAGGAGGGAGATCGATGGAGATGTCG
GTGTGAAAAATACTGAGGTAAAAAATCAGCAGCTACAGCAGCATCACGAC
CACTTGGAGGAGGTGGAGGAGGAGGAAGAGGCGGAAGAGAAGAAAGAGGA
AGAGGAAAGAGAAGATATGAATGGAGTCGGGGAAGCAGAGAGCACCTTTG
ATTGCAGGAGAAGGAGACGGCGGGAGTGGTGGCGGGGCTGGCGGCAGGTG
GTCGGCGCTGAAAGAGGGGTGCAGGATGGGAAGGAAGAGGAGGAGGACGA
AGATGGAGAGGTAGACAATGAAGAAAGAGAAGATGAGGAGGAAGATGAAG
AGGACGGAAACGTGTACGGGGCAGTCTCGCGGCCATGGTCGTGGCGGGTG
TGGAGAAGAAAGGGGGTGAAAGTGGGAGAAGAGGAAGGGAGAAAAGAAGG
GCAAAGGGAGAGCCCAGAACAGTATTCAGAGTGTAAAAGAGTAGGGAAGG
TTATCAATCAAGGCTCGAAAAAGGGAGAAGTGGAGAATCTGTTAATAATG
GAGAAGGTGAATGAGGTGGCCCGTCTGGTTGTGGCGACGCTGCCAGACGA
CCTCTTCGTGGAACTGGCAGGCTTCATGAAGCTGCCATGGGACAAAGACG
AAGAGGACTTGGGAAGAGGGTAGAGAACAGAAGGAGCAGGTGAGTAATAG
TTGAGCGGTAAGAGAGCCTCTAGATGGAGAGGTCAGAAAGCAAGAAACAA
GACCGAGTGGCAGGAAATAAAGATAGGGGAGAGTGCCCGGGTATTCTGGT
GGGTAAGGGGTGAGTTATTGTCCATGGACAAAGAAGATCAAGGTTGGCTG
ACTTGCTGAGACGCCAGGCCGGAAAAAAAGACTTCAAGAGGAGTGAAATG
ACCGAGAGGGGTGGAGGATAAAGGGATTAAAGAGGCTTGTAATGCTAGTA
ATTAGTTGATAGAAAAAATGGCAAGGATACCACACTCA
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protein sequence of NO14G00030.2

>NO14G00030.2-protein ID=NO14G00030.2-protein|Name=NO14G00030.2|organism=Nannochloropsis oceanica|type=polypeptide|length=569bp
MPPEFSRGHLGQEKRRAIFHYCWPAHQAIFCLVSPQRPPHPFLNPPEMLL
RPFHKDQTARLVEACRINDVVSLAAMLAEDPSLLSYESQPKERNLLLLAT
RAGSLDVVHWLLLHHGTALPLSVLPSSFSSSSSFSSSSPPRLINIDSQDR
EGKSALNLACGFVGCPRLVSLLLAYGADATQADARGLTPLLTAAWQGQRA
AVEALLEWHRKKKEEVEQRGVRGETIEARLNQQMLSSFPYSAPHEGNLVE
THGQKRGRQSSFPSLPPLSLLLSQTDGRGRSALYLSAAYGHNAVVSLLLA
MGADPRVRSKEGKTARDKAEARGEKEVAGLLKQYEEEPGRIRMLCGMRAR
EGRRREIDGDVGVKNTEVKNQQLQQHHDHLEEVEEEEEAEEKKEEEERED
MNGVGEAESTFDCRRRRRREWWRGWRQVVGAERGVQDGKEEEEDEDGEVD
NEEREDEEEDEEDGNVYGAVSRPWSWRVWRRKGVKVGEEEGRKEGQRESP
EQYSECKRVGKVINQGSKKGEVENLLIMEKVNEVARLVVATLPDDLFVEL
AGFMKLPWDKDEEDLGRG*
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protein sequence of NO14G00030.1

>NO14G00030.1-protein ID=NO14G00030.1-protein|Name=NO14G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=522bp
MLLRPFHKDQTARLVEACRINDVVSLAAMLAEDPSLLSYESQPKERNLLL
LATRAGSLDVVHWLLLHHGTALPLSVLPSSFSSSSSFSSSSPPRLINIDS
QDREGKSALNLACGFVGCPRLVSLLLAYGADATQADARGLTPLLTAAWQG
QRAAVEALLEWHRKKKEEVEQRGVRGETIEARLNQQMLSSFPYSAPHEGN
LVETHGQKRGRQSSFPSLPPLSLLLSQTDGRGRSALYLSAAYGHNAVVSL
LLAMGADPRVRSKEGKTARDKAEARGEKEVAGLLKQYEEEPGRIRMLCGM
RAREGRRREIDGDVGVKNTEVKNQQLQQHHDHLEEVEEEEEAEEKKEEEE
REDMNGVGEAESTFDCRRRRRREWWRGWRQVVGAERGVQDGKEEEEDEDG
EVDNEEREDEEEDEEDGNVYGAVSRPWSWRVWRRKGVKVGEEEGRKEGQR
ESPEQYSECKRVGKVINQGSKKGEVENLLIMEKVNEVARLVVATLPDDLF
VELAGFMKLPWDKDEEDLGRG*
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Synonyms
Publications