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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr14 | genome | chr14:6062..8649 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO14G00030.2 vs.
Match: EWM20383.1 (hypothetical protein Naga_100448g7 [Nannochloropsis gaditana]) HSP 1 Score: 219.9 bits (559), Expect = 2.000e-53 Identity = 146/237 (61.60%), Postives = 171/237 (72.15%), Query Frame = 0
Query: 347 MRAREGRRREIDGDVGVKNTEVKNQ--QLQQHHDHLEEVEEEEEAEEKKEEEEREDMN----------GVGEAESTFDCRRRRRREWWRGWRQVVGAERGVQDGKEEEEDEDGEVDNEEREDEEEDEEDGNVYGAVSRPWSWRVWRRKGVKVGEEEG-RKEGQRESPEQYSECKRVGKVINQGSKK----GEVENLLIMEKVNEVARLVVATLPDDLFVELAGFMKLPWDKDEEDLG 567
MRAREG+R+ + DVGV+N V+NQ Q QQH EE E+EEE E+KKE+EE+E GVGE E RRR +R RGWRQV G E GVQDGKEEEEDEDG+VD+E RE+E+E+EE GNVYGA+SRPWSWRV RR+ VKVG EEG R+EGQ ES EQYSE RVG IN+G KK GE +N M+K+ E A LVVATLPDDLFVELAGFM+LPWD+DE + G
Sbjct: 1 MRAREGKRKGVAVDVGVENVVVENQLQQQQQHQQQEEEEEKEEEDEKKKEKEEKEKEKEMEKKKEKRMGVGEEEEGILSRRRLQRGRCRGWRQVTGVEGGVQDGKEEEEDEDGDVDDERREEEDEEEEGGNVYGAISRPWSWRVRRRRMVKVGVEEGWREEGQGESAEQYSESGRVGG-INEGLKKYEKEGEEDNRKAMKKMGEGAHLVVATLPDDLFVELAGFMRLPWDEDEGEEG 236
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO14G00030.2 ID=NO14G00030.2|Name=NO14G00030.2|organism=Nannochloropsis oceanica|type=mRNA|length=2412bp TGTTTGTGTCGATTCCCTTGGAACTTAGAGAACAGAGTAGAATGGCAGCT GGCCAAGAGAGAGTGTGCACGCCATGCCTTCCATGCACACCCTTGCACTT GCCTGCGTCATGACATTCACATTTGGTCACCAAAGCAGACGCTGAATGAT GAGCCCAAAGCATTATAGTCACCCACGCTTACCCGTCGACAATCTCTCCC GCTAATGAACGCAACCACAGGCGGACACACTCCGAGTTGTTGCTTGGTTT TTGTCGCTTCTGCGTCAGACGCGACGCGCGCGGACAAGAGTGTGAAGCGC CGCCCCGGTCGTGTGTTGTTGTGATAGCCAACCACACTCTCTGCGTTGCC GTGCCCAGCTATCAAAGAGATTCAAGAAGTGGAATTCAGCATGCCGCCTG AATTCTCCAGGGGGCACTTGGGCCAGGAGAAACGACGGGCTATCTTCCAT TATTGCTGGCCTGCTCACCAAGCTATTTTTTGTCTCGTCTCACCTCAACG CCCCCCGCATCCATTCCTCAACCCACCAGAAATGCTGCTACGACCCTTCC ACAAAGACCAGACGGCCCGCCTCGTGGAAGCCTGCCGGATCAATGACGTG GTCTCCCTCGCCGCCATGTTGGCCGAAGACCCCTCTCTCCTTTCTTACGA GAGCCAGCCCAAAGAGCGCAATCTCCTCCTCCTGGCCACGCGAGCCGGTA GCCTTGACGTTGTCCACTGGCTCCTACTTCACCATGGCACAGCCCTTCCC CTCTCCGTCCTTCCTTCCTCCTTTTCCTCCTCCTCCTCCTTCTCTTCCTC TTCCCCCCCCCGCCTCATCAATATCGACAGCCAGGATCGAGAGGGGAAAA GCGCCTTGAATCTGGCTTGTGGCTTCGTAGGCTGTCCGCGGTTGGTGTCA TTGCTACTCGCGTATGGGGCAGATGCCACGCAGGCCGATGCGAGAGGCCT CACCCCTTTGCTCACGGCTGCGTGGCAAGGACAGAGGGCGGCTGTGGAGG CACTTCTGGAGTGGCACCGGAAGAAGAAGGAGGAGGTAGAGCAGAGAGGA GTCAGAGGCGAAACGATTGAGGCCAGATTGAATCAGCAGATGTTGTCATC ATTCCCGTATTCTGCTCCGCACGAAGGAAACCTGGTAGAAACCCACGGCC AAAAGAGGGGAAGACAAAGCTCATTCCCCTCCCTCCCCCCTCTTTCACTC CTTCTCTCCCAAACTGATGGACGCGGCCGCTCAGCGCTGTACCTGTCTGC GGCCTACGGCCACAATGCCGTGGTGTCCCTCTTGCTGGCAATGGGCGCCG ACCCGAGGGTGCGGTCGAAGGAAGGGAAGACGGCGAGGGACAAGGCGGAG GCTCGGGGAGAGAAGGAGGTTGCAGGGCTGCTGAAGCAGTACGAAGAAGA GCCAGGCAGGATAAGAATGCTTTGTGGAATGAGGGCGAGGGAGGGAAGGA GGAGGGAGATCGATGGAGATGTCGGTGTGAAAAATACTGAGGTAAAAAAT CAGCAGCTACAGCAGCATCACGACCACTTGGAGGAGGTGGAGGAGGAGGA AGAGGCGGAAGAGAAGAAAGAGGAAGAGGAAAGAGAAGATATGAATGGAG TCGGGGAAGCAGAGAGCACCTTTGATTGCAGGAGAAGGAGACGGCGGGAG TGGTGGCGGGGCTGGCGGCAGGTGGTCGGCGCTGAAAGAGGGGTGCAGGA TGGGAAGGAAGAGGAGGAGGACGAAGATGGAGAGGTAGACAATGAAGAAA GAGAAGATGAGGAGGAAGATGAAGAGGACGGAAACGTGTACGGGGCAGTC TCGCGGCCATGGTCGTGGCGGGTGTGGAGAAGAAAGGGGGTGAAAGTGGG AGAAGAGGAAGGGAGAAAAGAAGGGCAAAGGGAGAGCCCAGAACAGTATT CAGAGTGTAAAAGAGTAGGGAAGGTTATCAATCAAGGCTCGAAAAAGGGA GAAGTGGAGAATCTGTTAATAATGGAGAAGGTGAATGAGGTGGCCCGTCT GGTTGTGGCGACGCTGCCAGACGACCTCTTCGTGGAACTGGCAGGCTTCA TGAAGCTGCCATGGGACAAAGACGAAGAGGACTTGGGAAGAGGGTAGAGA ACAGAAGGAGCAGGTGAGTAATAGTTGAGCGGTAAGAGAGCCTCTAGATG GAGAGGTCAGAAAGCAAGAAACAAGACCGAGTGGCAGGAAATAAAGATAG GGGAGAGTGCCCGGGTATTCTGGTGGGTAAGGGGTGAGTTATTGTCCATG GACAAAGAAGATCAAGGTTGGCTGACTTGCTGAGACGCCAGGCCGGAAAA AAAGACTTCAAGAGGAGTGAAATGACCGAGAGGGGTGGAGGATAAAGGGA TTAAAGAGGCTTGTAATGCTAGTAATTAGTTGATAGAAAAAATGGCAAGG ATACCACACTCA back to topprotein sequence of NO14G00030.2 >NO14G00030.2-protein ID=NO14G00030.2-protein|Name=NO14G00030.2|organism=Nannochloropsis oceanica|type=polypeptide|length=569bp MPPEFSRGHLGQEKRRAIFHYCWPAHQAIFCLVSPQRPPHPFLNPPEMLL RPFHKDQTARLVEACRINDVVSLAAMLAEDPSLLSYESQPKERNLLLLAT RAGSLDVVHWLLLHHGTALPLSVLPSSFSSSSSFSSSSPPRLINIDSQDR EGKSALNLACGFVGCPRLVSLLLAYGADATQADARGLTPLLTAAWQGQRA AVEALLEWHRKKKEEVEQRGVRGETIEARLNQQMLSSFPYSAPHEGNLVE THGQKRGRQSSFPSLPPLSLLLSQTDGRGRSALYLSAAYGHNAVVSLLLA MGADPRVRSKEGKTARDKAEARGEKEVAGLLKQYEEEPGRIRMLCGMRAR EGRRREIDGDVGVKNTEVKNQQLQQHHDHLEEVEEEEEAEEKKEEEERED MNGVGEAESTFDCRRRRRREWWRGWRQVVGAERGVQDGKEEEEDEDGEVD NEEREDEEEDEEDGNVYGAVSRPWSWRVWRRKGVKVGEEEGRKEGQRESP EQYSECKRVGKVINQGSKKGEVENLLIMEKVNEVARLVVATLPDDLFVEL AGFMKLPWDKDEEDLGRG* back to topmRNA from alignment at chr14:6062..8649- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO14G00030.2 ID=NO14G00030.2|Name=NO14G00030.2|organism=Nannochloropsis oceanica|type=mRNA|length=2588bp|location=Sequence derived from alignment at chr14:6062..8649- (Nannochloropsis oceanica) TGTTTGTGTCGATTCCCTTGGAACTTAGAGAACAGAGTAGAATGGCAGCT
GGCCAAGAGAGAGTGTGCACGCCATGCCTTCCATGCACACCCTTGCACTT
GCCTGCGTCATGACATTCACATTTGGTCACCAAAGCAGACGCTGAATGAT
GAGCCCAAAGCATTATAGTCACCCACGCTTACCCGTCGACAATCTCTCCC
GCTAATGAACGCAACCACAGGCGGACACACTCCGAGTTGTTGCTTGGTTT
TTGTCGCTTCTGCGTCAGACGCGACGCGCGCGGACAAGAGTGTGAAGCGC
CGCCCCGGTCGTGTGTTGTTGTGATAGCCAACCACACTCTCTGCGTTGCC
GTGCCCAGCTATCAAAGAGATTCAAGAAGGTATGTGTACACATGGATGCG
TCAGTAGTGTGCTGGTGATTGAGTTGGAGTGAGTGCTTGCTTCATGTCTT
CAAGAACAAGAAAGTCTGCCAGACGTCTCTTCAAAAATCACTTACTCTCT
TGGTTCCTACCACCACCATCCATCAACACCTTCATTTCCATAAAATCACT
CTTAGTGGAATTCAGCATGCCGCCTGAATTCTCCAGGGGGCACTTGGGCC
AGGAGAAACGACGGGCTATCTTCCATTATTGCTGGCCTGCTCACCAAGCT
ATTTTTTGTCTCGTCTCACCTCAACGCCCCCCGCATCCATTCCTCAACCC
ACCAGAAATGCTGCTACGACCCTTCCACAAAGACCAGACGGCCCGCCTCG
TGGAAGCCTGCCGGATCAATGACGTGGTCTCCCTCGCCGCCATGTTGGCC
GAAGACCCCTCTCTCCTTTCTTACGAGAGCCAGCCCAAAGAGCGCAATCT
CCTCCTCCTGGCCACGCGAGCCGGTAGCCTTGACGTTGTCCACTGGCTCC
TACTTCACCATGGCACAGCCCTTCCCCTCTCCGTCCTTCCTTCCTCCTTT
TCCTCCTCCTCCTCCTTCTCTTCCTCTTCCCCCCCCCGCCTCATCAATAT
CGACAGCCAGGATCGAGAGGGGAAAAGCGCCTTGAATCTGGCTTGTGGCT
TCGTAGGCTGTCCGCGGTTGGTGTCATTGCTACTCGCGTATGGGGCAGAT
GCCACGCAGGCCGATGCGAGAGGCCTCACCCCTTTGCTCACGGCTGCGTG
GCAAGGACAGAGGGCGGCTGTGGAGGCACTTCTGGAGTGGCACCGGAAGA
AGAAGGAGGAGGTAGAGCAGAGAGGAGTCAGAGGCGAAACGATTGAGGCC
AGATTGAATCAGCAGATGTTGTCATCATTCCCGTATTCTGCTCCGCACGA
AGGAAACCTGGTAGAAACCCACGGCCAAAAGAGGGGAAGACAAAGCTCAT
TCCCCTCCCTCCCCCCTCTTTCACTCCTTCTCTCCCAAACTGATGGACGC
GGCCGCTCAGCGCTGTACCTGTCTGCGGCCTACGGCCACAATGCCGTGGT
GTCCCTCTTGCTGGCAATGGGCGCCGACCCGAGGGTGCGGTCGAAGGAAG
GGAAGACGGCGAGGGACAAGGCGGAGGCTCGGGGAGAGAAGGAGGTTGCA
GGGCTGCTGAAGCAGTACGAAGAAGAGCCAGGCAGGATAAGAATGCTTTG
TGGAATGAGGGCGAGGGAGGGAAGGAGGAGGGAGATCGATGGAGATGTCG
GTGTGAAAAATACTGAGGTAAAAAATCAGCAGCTACAGCAGCATCACGAC
CACTTGGAGGAGGTGGAGGAGGAGGAAGAGGCGGAAGAGAAGAAAGAGGA
AGAGGAAAGAGAAGATATGAATGGAGTCGGGGAAGCAGAGAGCACCTTTG
ATTGCAGGAGAAGGAGACGGCGGGAGTGGTGGCGGGGCTGGCGGCAGGTG
GTCGGCGCTGAAAGAGGGGTGCAGGATGGGAAGGAAGAGGAGGAGGACGA
AGATGGAGAGGTAGACAATGAAGAAAGAGAAGATGAGGAGGAAGATGAAG
AGGACGGAAACGTGTACGGGGCAGTCTCGCGGCCATGGTCGTGGCGGGTG
TGGAGAAGAAAGGGGGTGAAAGTGGGAGAAGAGGAAGGGAGAAAAGAAGG
GCAAAGGGAGAGCCCAGAACAGTATTCAGAGTGTAAAAGAGTAGGGAAGG
TTATCAATCAAGGCTCGAAAAAGGGAGAAGTGGAGAATCTGTTAATAATG
GAGAAGGTGAATGAGGTGGCCCGTCTGGTTGTGGCGACGCTGCCAGACGA
CCTCTTCGTGGAACTGGCAGGCTTCATGAAGCTGCCATGGGACAAAGACG
AAGAGGACTTGGGAAGAGGGTAGAGAACAGAAGGAGCAGGTGAGTAATAG
TTGAGCGGTAAGAGAGCCTCTAGATGGAGAGGTCAGAAAGCAAGAAACAA
GACCGAGTGGCAGGAAATAAAGATAGGGGAGAGTGCCCGGGTATTCTGGT
GGGTAAGGGGTGAGTTATTGTCCATGGACAAAGAAGATCAAGGTTGGCTG
ACTTGCTGAGACGCCAGGCCGGAAAAAAAGACTTCAAGAGGAGTGAAATG
ACCGAGAGGGGTGGAGGATAAAGGGATTAAAGAGGCTTGTAATGCTAGTA
ATTAGTTGATAGAAAAAATGGCAAGGATACCACACTCA back to topCoding sequence (CDS) from alignment at chr14:6062..8649- >NO14G00030.2 ID=NO14G00030.2|Name=NO14G00030.2|organism=Nannochloropsis oceanica|type=CDS|length=1707bp|location=Sequence derived from alignment at chr14:6062..8649- (Nannochloropsis oceanica) ATGCCGCCTGAATTCTCCAGGGGGCACTTGGGCCAGGAGAAACGACGGGC TATCTTCCATTATTGCTGGCCTGCTCACCAAGCTATTTTTTGTCTCGTCT CACCTCAACGCCCCCCGCATCCATTCCTCAACCCACCAGAAATGCTGCTA CGACCCTTCCACAAAGACCAGACGGCCCGCCTCGTGGAAGCCTGCCGGAT CAATGACGTGGTCTCCCTCGCCGCCATGTTGGCCGAAGACCCCTCTCTCC TTTCTTACGAGAGCCAGCCCAAAGAGCGCAATCTCCTCCTCCTGGCCACG CGAGCCGGTAGCCTTGACGTTGTCCACTGGCTCCTACTTCACCATGGCAC AGCCCTTCCCCTCTCCGTCCTTCCTTCCTCCTTTTCCTCCTCCTCCTCCT TCTCTTCCTCTTCCCCCCCCCGCCTCATCAATATCGACAGCCAGGATCGA GAGGGGAAAAGCGCCTTGAATCTGGCTTGTGGCTTCGTAGGCTGTCCGCG GTTGGTGTCATTGCTACTCGCGTATGGGGCAGATGCCACGCAGGCCGATG CGAGAGGCCTCACCCCTTTGCTCACGGCTGCGTGGCAAGGACAGAGGGCG GCTGTGGAGGCACTTCTGGAGTGGCACCGGAAGAAGAAGGAGGAGGTAGA GCAGAGAGGAGTCAGAGGCGAAACGATTGAGGCCAGATTGAATCAGCAGA TGTTGTCATCATTCCCGTATTCTGCTCCGCACGAAGGAAACCTGGTAGAA ACCCACGGCCAAAAGAGGGGAAGACAAAGCTCATTCCCCTCCCTCCCCCC TCTTTCACTCCTTCTCTCCCAAACTGATGGACGCGGCCGCTCAGCGCTGT ACCTGTCTGCGGCCTACGGCCACAATGCCGTGGTGTCCCTCTTGCTGGCA ATGGGCGCCGACCCGAGGGTGCGGTCGAAGGAAGGGAAGACGGCGAGGGA CAAGGCGGAGGCTCGGGGAGAGAAGGAGGTTGCAGGGCTGCTGAAGCAGT ACGAAGAAGAGCCAGGCAGGATAAGAATGCTTTGTGGAATGAGGGCGAGG GAGGGAAGGAGGAGGGAGATCGATGGAGATGTCGGTGTGAAAAATACTGA GGTAAAAAATCAGCAGCTACAGCAGCATCACGACCACTTGGAGGAGGTGG AGGAGGAGGAAGAGGCGGAAGAGAAGAAAGAGGAAGAGGAAAGAGAAGAT ATGAATGGAGTCGGGGAAGCAGAGAGCACCTTTGATTGCAGGAGAAGGAG ACGGCGGGAGTGGTGGCGGGGCTGGCGGCAGGTGGTCGGCGCTGAAAGAG GGGTGCAGGATGGGAAGGAAGAGGAGGAGGACGAAGATGGAGAGGTAGAC AATGAAGAAAGAGAAGATGAGGAGGAAGATGAAGAGGACGGAAACGTGTA CGGGGCAGTCTCGCGGCCATGGTCGTGGCGGGTGTGGAGAAGAAAGGGGG TGAAAGTGGGAGAAGAGGAAGGGAGAAAAGAAGGGCAAAGGGAGAGCCCA GAACAGTATTCAGAGTGTAAAAGAGTAGGGAAGGTTATCAATCAAGGCTC GAAAAAGGGAGAAGTGGAGAATCTGTTAATAATGGAGAAGGTGAATGAGG TGGCCCGTCTGGTTGTGGCGACGCTGCCAGACGACCTCTTCGTGGAACTG GCAGGCTTCATGAAGCTGCCATGGGACAAAGACGAAGAGGACTTGGGAAG AGGGTAG back to top
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