NO13G03180, NO13G03180 (gene) Nannochloropsis oceanica

Overview
NameNO13G03180
Unique NameNO13G03180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4174
Alignment locationchr13:924470..928643 +

Link to JBrowse

Properties
Property NameValue
DescriptionMembrane protein-a permease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:924470..928643 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002549UPF0118
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO13G03180 vs. NCBI_GenBank
Match: EWM20746.1 (membrane protein- a permease [Nannochloropsis gaditana])

HSP 1 Score: 279.6 bits (714), Expect = 2.100e-71
Identity = 147/192 (76.56%), Postives = 159/192 (82.81%), Query Frame = 0
Query:  346 IRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPDLSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQHPYARVAVRIMEGRILDFDFDGHTSIINTGFKDKEGPR-HHQRSASEVVSVQP 537
            +RRYIRLKT VCVLIA+ VG CLSLLRVPF+GLF L+TFVLNYIPNFGPIVATLLPLPLV+FSPDLS  AKVLA  LPSLGH FVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNL+HPYARVA RI+EGR+ D   DG            EGPR ++Q   +E   +QP
Sbjct:   11 LRRYIRLKTFVCVLIAVLVGCCLSLLRVPFSGLFGLLTFVLNYIPNFGPIVATLLPLPLVVFSPDLSVTAKVLALVLPSLGHFFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLEHPYARVAARIIEGRLFDAGLDGRNG-GKPPCAGSEGPRGYYQNRTAEETPIQP 201          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: CBJ31878.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 243.0 bits (619), Expect = 2.100e-60
Identity = 125/283 (44.17%), Postives = 187/283 (66.08%), Query Frame = 0
Query:  219 GAWERMHCPRPLAVMLAIALAMGVFALFGMIIYHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLVPYLMDNLKSDIPALVSDVWVAVANGILVLIFLVYLLGSRPQPLPPGVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPDLSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQHPYARVAVRIMEGRILD 502
            G + +   PR LAV+LAI++ +   A  G I+Y S+  LQ ++  YE  AE+    ++  L K + S+N+D +P+ + +L+  +P L+  +  ++    LV IFLVYLL S  +P+   VW  ID+ IRRYIRLKT+V +L A  V   L +L V  A +F ++TFVLN++PN GP++AT LP+PL +F PD+S   +VLAF LP+  H+ +G  +EP LFGE  E+ P+++LLSLAFW  LWG+ GMIL+VP++   RIVC +L HPYA+  +R++EG + +
Sbjct:   68 GLFNKPVVPRWLAVILAISVVLTALATVGAIVYGSVLSLQANFGKYETEAERMASVIDKRLHKYNYSINEDFMPFAIGSLRERVPRLLKLILSSLEYFFLVAIFLVYLLISPVKPIKSSVWGIIDLQIRRYIRLKTMVGMLAATVVTTMLWVLGVQMAYVFGIITFVLNFVPNLGPMIATFLPMPLAIFDPDMSHLNQVLAFVLPTTAHLVIGNLVEPGLFGESFELSPVVVLLSLAFWGSLWGIPGMILAVPMVVITRIVCDHLDHPYAKTLMRLLEGNVFE 350          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: XP_007515733.1 (membrane protein [Bathycoccus prasinos] >CCO14612.1 membrane protein [Bathycoccus prasinos])

HSP 1 Score: 161.8 bits (408), Expect = 6.300e-36
Identity = 97/280 (34.64%), Postives = 156/280 (55.71%), Query Frame = 0
Query:  223 RMHCPRPLAVMLAIALAMGVFALFGMIIYHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLVPYLMD-----NLKSDIPALVSDVWVAVANGILVLIFLVYLLGSR-----PQPLPPGVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPDLSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQ--HPYARV 491
            R   P   ++ +A+   +G+      +I HS++ L +D   YE    +   R    L++ ++ + D +   L D      +     A++  V   ++N +LVLIF+VYLL  R      + +P GVW +I+  I+RYI LK  V  L           L V  A +F ++ FV+N+IP+ GPI+AT+LPLP+VL S D+      LA  LP + H  +G  +EP+L G HL++HPI +LL L FW +LWG+ GM+L+ P+ A ++I+C++++  HP A +
Sbjct:   96 RAKVPHGASITIALFFGLGILCSLLFLISHSVKDLVQDAKKYERYVVRLTNRAGETLSRKNIDM-DVIEAQLQDIPLAKMVAQSTHAMLQAVLDLLSNVVLVLIFVVYLLEGRRRQKVERRVPGGVWTRIETRIKRYILLKFFVSTLNGFIAASIYYALNVELAMVFGVLHFVMNFIPHVGPIIATVLPLPVVLVSKDIHFLHVTLAILLPGMTHFTIGNVVEPKLMGGHLDLHPITVLLCLIFWGMLWGIPGMVLAAPITASLKILCESVEVMHPLALI 374          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: XP_005824226.1 (hypothetical protein GUITHDRAFT_89764 [Guillardia theta CCMP2712] >EKX37246.1 hypothetical protein GUITHDRAFT_89764 [Guillardia theta CCMP2712])

HSP 1 Score: 155.6 bits (392), Expect = 4.500e-34
Identity = 127/442 (28.73%), Postives = 202/442 (45.70%), Query Frame = 0
Query:   78 ENLVAVCLLIMALLCLGIILFVLRPILIPFAVSLLFYYLLQPVVNTLNKPPAICCRELYVGCAELGAPVSDEGEGSMASSSIGGRFLSRAVGGLRRRAGYDTVASDEEEXXXXXXXXXXXXXXXTSPLSTFTEGGSVVGEGGAWERMHCPRPLAVMLAIALAMGVFALFGMIIYHSIQRL-------------QKDWPIYEMGAEQAVQRLNAGLAK--LHVSLNDDLVPYLMDNLKSDIPALVSDVWVAVANGILVLIFLVYLL---GSRP--QPLPPGVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPDLSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQHPYARVAVRIMEGRI 500
            +++   CL ++AL+  G IL  LR +LIPF +++  +Y L P+V+ L+            G   +  P+       + S SI      R                                                            PRP+AV++A+  A  + A+  ++I+ S+  L               DW +   G    +   N G+A+  LH S       +L + +   +   V +    + NG L+L+F VYLL    S P  +    GV  +ID+ ++RYI  K L+     I +G+ L +L+V  A +F L+  +LN+IPN G +++TLLP+P+V+F P  +     LAF +PS  H   G  +EPR+ G  +++HP+++LLSL  W  LWGV GMILSVP+ A ++I  Q+L HP  R    + EGR+
Sbjct:   20 KHIHTACLFLLALVAAGTILVHLRSVLIPFVLAMGLFYSLVPIVDMLSDQTWQRTPRARTGAVGVVPPI------VVVSESISSLLQCR-----------------------------------------------------------LPRPMAVVVALMFACVLIAMILVVIFSSVNELAAHAERYSARVRSMADW-VIRWGKLMGMDISNQGIAEKLLHHS------AFLSEMVVKSVSLAVEE----MTNGFLMLLFTVYLLLGYASSPPDEKRVSGVRAEIDMQVKRYIGFKVLLSTTTGIVIGISLLILKVDLALVFGLLAGLLNFIPNVGGVISTLLPMPVVIFDPSKTWLDIFLAFAIPSFVHAVTGNIIEPRVLGGAMDLHPVVVLLSLMLWGSLWGVVGMILSVPITAVIKICLQSLDHPLPRFLAGMFEGRV 385          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: WP_013629494.1 (AI-2E family transporter [Rubinisphaera brasiliensis] >ADY60773.1 protein of unknown function UPF0118 [Rubinisphaera brasiliensis DSM 5305])

HSP 1 Score: 145.6 bits (366), Expect = 4.700e-31
Identity = 87/273 (31.87%), Postives = 142/273 (52.01%), Query Frame = 0
Query:  223 RMHCPRPLAVMLAIALAMGVFALFGMIIYHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLV----------PYLMDNLKSDIPALVSDVWVAVANGILVLIFLVY-LLGSRPQPLPPGVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPDLSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQ 485
            R+H  R LA  +     + +  + G  ++ S   L++  P Y    ++ V R+      L +    + V           +L   L   I  L S +   +  G++VLI++ + LLG   +  P   W KID  IR Y+RLKT+V ++  +  G  L++  +P A  F ++ F+LNYIPN GP+VAT+LP+PL++ +P+      V      S      G  +EP+L G+  ++HPI+ILL+L FW +LWG+ GM L+ P+ A +++V    Q
Sbjct:   53 RLHVNRLLAAGITFVAGLVIMFVLGSALWASTVELRQSAPAYRQRIQELVDRVENAFPNLPMQKKAEAVTPEKNAEAIDAFLDAMLHKGIATLSSAMLYLITTGVVVLIYVFFMLLGQSTESSPSATWTKIDDQIREYLRLKTVVSLITGLIFGGVLAMFGIPMALTFGVLAFLLNYIPNIGPLVATVLPVPLIILNPEAHLLWIVAVIGSISAIQFVSGNIIEPKLMGDSTDLHPIVILLALMFWGMLWGIVGMFLATPITAGLKLVLDQFQ 325          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: XP_024574896.1 (transmembrane protein [Plasmopara halstedii] >CEG38527.1 transmembrane protein [Plasmopara halstedii])

HSP 1 Score: 144.8 bits (364), Expect = 8.000e-31
Identity = 90/262 (34.35%), Postives = 151/262 (57.63%), Query Frame = 0
Query:  226 CPRPLAVMLAIALAMGVFALFGMIIYHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLVPYLMDNLKSDIPALVSDVWVAVANGILVLIFLVYLLGSRPQPLPP-GVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPD--LSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQ 485
            C R LA  +A++L    F L G I   S+  L  D   Y+ G    V  +   L ++ + +N  +   L DN+      +V++    ++   + LI+L Y L +R +     GVW KID  I+R++ LK  + + +A+ V +    L V  A ++ ++TF+LN+IPN G ++A++ P+ ++  +P   ++   K LA FLP   H+FVG ++EP++FG  LE+ P+I++LSL+ W +LWGV GM+LSVPL A  +I+  +L+
Sbjct:  151 CSRALASFVAVSLVCVFFGLLGYITVLSVHAL--DASAYQTGYNSLVSGVEHLLGQIGLPVN--ITTTLHDNVDKLARFVVTETMDLLSVMFVTLIYLTYFLCTRTRASDAGGVWSKIDHDIQRFVTLKCFLSLFVALLVTIVYVSLNVGLAVVWGMLTFILNWIPNVGAMIASVAPICIIAITPSELMNPMEKFLAMFLPMCFHMFVGNFVEPKVFGRKLEIDPVIVILSLSAWGLLWGVVGMMLSVPLTAAAKIMLSHLK 408          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: OQR89359.1 (transmembrane protein [Thraustotheca clavata])

HSP 1 Score: 144.4 bits (363), Expect = 1.000e-30
Identity = 89/264 (33.71%), Postives = 152/264 (57.58%), Query Frame = 0
Query:  226 CPRPLAVMLAIALAMGVFALFGMIIYHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLVPYLMDNLKSDIPALVSDVWVAVANGILVLIFLVYLLGSRPQPLPP-GVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPD-----LSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNL 484
            C R  + + A+++    F L G I   SI  L+     Y+ G    VQ +     ++ V +N  +   L DN+      ++++V   ++   + +I+L Y L +R +     GVW KID+ I+R++ LK  + + +A+ V +    L V  A  + ++TF+LN+IPN G ++A+ LPL +++ SP+     +S   K LA  LP   H+FVG ++EP++FG  LE+ P+++++SL+ W +LWGV GM+LSVPL A  +I+C +L
Sbjct:  177 CSRAFSSLCAVSVVCLFFFLLGYIAVLSIHALEV--TKYQEGYTAFVQHVEVLSQQVGVPMN--ITTTLHDNVDKFARLVLTEVMDLLSTLFVTMIYLTYFLCTRTRASDAGGVWSKIDMDIQRFVTLKCYLSLFVALLVTIVYVSLNVGLAIFWGILTFILNWIPNVGAMIASFLPLLIIVISPEGPDGLMSSMDKFLAMILPMSFHMFVGNFIEPKVFGRKLEMDPVVVIISLSAWGLLWGVVGMMLSVPLTASFKIMCSHL 436          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: WP_105349791.1 (AI-2E family transporter [Blastopirellula marina] >PQO40283.1 AI-2E family transporter [Blastopirellula marina])

HSP 1 Score: 143.7 bits (361), Expect = 1.800e-30
Identity = 81/219 (36.99%), Postives = 125/219 (57.08%), Query Frame = 0
Query:  287 NDDLVPYLMDNLKSDIPALVSDVWVAVANGILVLIFLVY-LLGSRPQPLPPGVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPDLSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQHPYARVAVRIMEGRILDFDF 505
            +D +   + D +K+ +  L   +   +    +V+IFL + LLGS    LP   W++ID  IR YI  K+L+     +  G  L L  +P A +F+L+ F+ N+IPN GPI+A LLPLPL++  P+++     L   L S   +  G  +EPR+ G+  +VHPI ILL+L FWS++WG+ GM L+VP+ A M+I+    +    R    ++ GRI  F F
Sbjct:  173 HDMVSEMINDMVKNSLSKLTDSMSYVIQTSTMVVIFLFFLLLGSSQATLPENTWQEIDAKIREYILTKSLISFFTGLAFGFVLWLFGIPLAAVFALLAFLFNFIPNIGPILACLLPLPLIVLDPEMTWWGMTLVIVLSSAVQIISGNVIEPRMMGDSFDVHPIAILLALMFWSLIWGMIGMFLAVPMTAIMKILFAKFE--MTRPLADLLAGRIDRFSF 389          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: XP_008607694.1 (hypothetical protein SDRG_03828 [Saprolegnia diclina VS20] >EQC38870.1 hypothetical protein SDRG_03828 [Saprolegnia diclina VS20])

HSP 1 Score: 143.3 bits (360), Expect = 2.300e-30
Identity = 89/265 (33.58%), Postives = 152/265 (57.36%), Query Frame = 0
Query:  226 CPRPLAVMLAIALAMGVFALFGMIIYHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLVPYLMDNLKSDIPALVSDVWVAVANGILVLIFLVYLLGSRPQPLPP-GVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPD-----LSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQ 485
            C R  + + A+++    F L G I   SI  L+     Y+ G    VQ +     ++ V +N  +   L DN+      ++++V   ++   + +I+L Y L +R +     GVW KID  I+R++ LK  + + +A+ V +    L V  A  + ++TF+LN+IPN G ++A+ LPL +++ SP+     +S   K LA  LP   H+FVG ++EP++FG  LE+ P+++++SL+ W +LWGV GM+LSVPL A  +I+C +L+
Sbjct:  275 CSRAFSSLCAVSVVCLFFFLLGYIAVLSIHALEV--TKYQEGYTAFVQHVEVLSQQVGVPMN--ITTTLHDNVDKLARLVLTEVMDLLSTLFVTMIYLTYFLCTRTRASDAGGVWSKIDNDIQRFVTLKCYLSLFVALLVTIVYVSLNVGLAIFWGILTFILNWIPNVGAMIASFLPLCIIMISPEGPNGLMSPMDKFLAMVLPMCFHMFVGNFIEPKVFGRKLEMDPVVVIISLSAWGLLWGVVGMMLSVPLTAAFKIMCSHLK 535          
BLAST of NO13G03180 vs. NCBI_GenBank
Match: XP_012199720.1 (hypothetical protein SPRG_05614 [Saprolegnia parasitica CBS 223.65] >KDO29662.1 hypothetical protein SPRG_05614 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 143.3 bits (360), Expect = 2.300e-30
Identity = 89/265 (33.58%), Postives = 152/265 (57.36%), Query Frame = 0
Query:  226 CPRPLAVMLAIALAMGVFALFGMIIYHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLVPYLMDNLKSDIPALVSDVWVAVANGILVLIFLVYLLGSRPQPLPP-GVWRKIDIHIRRYIRLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLLPLPLVLFSPD-----LSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIIILLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQ 485
            C R  + + A+++    F L G I   SI  L+     Y+ G    VQ +     ++ V +N  +   L DN+      ++++V   ++   + +I+L Y L +R +     GVW KID  I+R++ LK  + + +A+ V +    L V  A  + ++TF+LN+IPN G ++A+ LPL +++ SP+     +S   K LA  LP   H+FVG ++EP++FG  LE+ P+++++SL+ W +LWGV GM+LSVPL A  +I+C +L+
Sbjct:  134 CSRAFSSLCAVSVVCLFFFLLGYIAVLSIHALEV--TKYQEGYTAFVQHVEVLSQQVGVPMN--ITTTLHDNVDKLARLVLTEVMDLLSTLFVTMIYLTYFLCTRTRASDAGGVWSKIDNDIQRFVTLKCYLSLFVALLVTIVYVSLNVGLAIFWGILTFILNWIPNVGAMIASFLPLCIIMISPEGPNGLMSPMDKFLAMVLPMCFHMFVGNFIEPKVFGRKLEMDPVVVIISLSAWGLLWGVVGMMLSVPLTAAFKIMCSHLK 394          
The following BLAST results are available for this feature:
BLAST of NO13G03180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20746.12.100e-7176.56membrane protein- a permease [Nannochloropsis gadi... [more]
CBJ31878.12.100e-6044.17conserved unknown protein [Ectocarpus siliculosus][more]
XP_007515733.16.300e-3634.64membrane protein [Bathycoccus prasinos] >CCO14612.... [more]
XP_005824226.14.500e-3428.73hypothetical protein GUITHDRAFT_89764 [Guillardia ... [more]
WP_013629494.14.700e-3131.87AI-2E family transporter [Rubinisphaera brasiliens... [more]
XP_024574896.18.000e-3134.35transmembrane protein [Plasmopara halstedii] >CEG3... [more]
OQR89359.11.000e-3033.71transmembrane protein [Thraustotheca clavata][more]
WP_105349791.11.800e-3036.99AI-2E family transporter [Blastopirellula marina] ... [more]
XP_008607694.12.300e-3033.58hypothetical protein SDRG_03828 [Saprolegnia dicli... [more]
XP_012199720.12.300e-3033.58hypothetical protein SPRG_05614 [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL130nonsL130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR096ngnoR096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007629NSK007629Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G03180.1NO13G03180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604777gene_8984Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100249g9gene9666Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G03180.1NO13G03180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G03180 ID=NO13G03180|Name=NO13G03180|organism=Nannochloropsis oceanica|type=gene|length=4174bp
ATGGACCCTTTGCGTCCTGGACCCGGGGGGAGCACCAGCAGCGGCACTAT
CTCCCTAGGCGTCTCAGAAGCTCGCTTTCCCCCTACCTACGGTTCTGTGG
ACGACGGAGGCATCGGCATGGTCAACAGAAGTGGATGGAGGGATGGGGGA
AAGGAGAGCGGGTTTCCGCCTTTGCGTCGATCGTACTCGCTGAGCGCGAT
TAGAGAGGGTGTACCgtaagtagatagaaagcgggacggggaccatggga
ggttctgaggagaggagaaggaacttatggagccctgccacaattttcgg
gtcaggccactcgagcaattagcgtccgactttttcttcacccaatcatc
ctttctcgttcctttcctcccttcatccataccaaagAACCCTTGGTCGG
CACGAGAACCTGGTAGCGGTCTGCTTGCTCATTATGGCGTTGCTTTGCCT
AGgtagcgttgatggagaggaagagggaagaaggggagggagggagatgc
ctctgagctcggaatgggaaggggttggcgcctgtctataagttcaatct
atctatctatctatcatacacacaccccgcatatcaaatgccattaatca
taccctcttatcctcggtccccagGCATCATCCTCTTTGTCCTGCGGCCT
ATTCTCATCCCCTTCGCCGTCTCCCTCCTTTTCTACTACCTTCTCCAACC
CGTCGTCAACACCCTCAACAAAgtgaggaccggagggagggagggagata
gggagggagggaggaaggaaggaaggaaggaaggagggaaagaaggaaaa
agcattaaggtaacctacaatctcctcctgagcacctcattttcctagtc
actcttcccattcttcctccctcctccccctcccctcaatccctcgtgca
gCCTCCTGCCATTTGCTGTCGGGAGTTGTATGTGGGCTGTGCGGAACTAG
GGGCCCCTGTGAGCGACGAAGGGGAAGGAAGCATGGCTTCCTCTTCAATT
GGGGGCAGGTTTCTCTCCCGAGCCGTCGGAGGGCTGCGACGACGgtgggg
agggagggagggagggagggagggagggaagaagagggtatcgttacaag
cggcatatctcgtctcataactttatgatccttccctcccttcctctccc
cctccctccttccctctctcccatgctatcttcctcaataacccagCGCC
GGATACGATACCGTCGCCTCCGACGAGGAGGAAGGGAAAGAGGGAGGGCG
GGAGGGAGGGAGGGGGGGAGGGAGGACCACATCGCCCCTGTCGACCTTCA
CGGAAGGAGGGAGTGTGGTGGGGGAGGGAGGCGCATGGGAGAGGATGCAC
TGCCCGCGGCCTCTCGCTGTCATGCTGGCGATTGCCTTGGCCATGGgtat
gactgcctgtcctccctccctccctcctcccctccttccctcccttcctc
ccttcctccctccctccctccctccctccctccctcccatggacgctcgt
catgttctttttctgcaatgtatttattttacgcccttcttcgttccctc
cctccctgcctcccctttccttcctcagGCGTCTTCGCCTTGTTCGGGAT
GATCATTTATCACTCCATTCAACGGCTTCAGAAGGACTGGCCCATATACG
AAATGGGTGCCGAGCAGgttaagagggagggagagagtgagggagggatt
gagggagggagggagggaaggagggagggagggcgcatagcgggtgggta
ggtaaagagggaggaaggatttgaggcgggagggagggagggagggaggg
agggagggagggtactcctaccctatctgtcaatcctctgtctgcgtgtt
caaatctctcctccctccctgtcttcctccctccctccctcagGCCGTAC
AACGGCTCAATGCCGGGCTGGCCAAGTTGCATGTCTCATTAAATGATGAC
CTGGTTCCCTACCTGATGGACAACCTCAAGgtagagagggagggagggag
ggagggagggagggacagagcgatatccccacggtgtctttctttcttgc
tcatttacccatccctccttccttccctcccttcacattacacctttcca
cacccccgcagAGCGATATCCCCGCCCTTGTATCGGACGTCTGGGTCGCC
GTGGCCAATGGgtaggcctctccctccctccctccctccctccccccctc
cctccctccctcccgcccgccctccctccctccctctccacctccatccc
cactctctccctccctccctttctctccctccctccctccctccccactc
tctcccttatacccttcccatgctccttttcctccctccctctctttctc
cctgcagCATCCTCGTCCTCATTTTCCTCGTCTACCTCCTGGGCTCCCGG
CCTCAGCCGCTGCCTCCGGGCGTGTGGCGGAAGATCGACATCCATATCAG
gtactgagggaaggaaggagggagggagggagggagggaaggaaacggca
actctttcggtttgccttttgcctctaatccctcaacatgatcccggccc
tccccccctctctctcagGCGCTACATACGCCTCAAAACCCTCGTATGCG
TCCTCATCGCCATCTTCGTCGGCGTCTGCCTCTCCCTCCTCCGGGTACCG
TTCGCTGGCCTCTTCAGCCTTGTCACCTTCGTCTTGAACTACATCCCAAA
Tgtacgcccctccctccctcctcccctccctcccctccctcccctcccct
cccccctccctcccctccctcccctcccctcccctccctccctccctccc
tccctccctccctccttccttcatttgtcgcataaccagacctcgggatt
gagacgcacacaccccctccctccccagTTCGGGCCCATTGTCGCCACCC
TCCTCCCCCTCCCCCTCGTCCTCTTCTCCCCCGACCTCTCCGACGCGGCC
AAAGTCCTGGCCTTCTTCCTTCCCTCCCTCGGCCACGTCTTCGTCGGGTA
CTACCTGgtgaggaggaaggaagaaagggagggagggagggagggaggga
gggagggacggagggtccggggaagtgaggaaaccagtagagagggagga
aaggaaggaatttcacgccattcatctattggcatccatgtatgccgttc
gtctatatccatattctgttttaaatggagccgctacctatcaataccca
tgcatgccattttatcgaataatcattttttttatgaggagccgctatcc
atcaatatccatgtatgccattcgatctcattatctttctctttgaaagG
AGCCGCGCCTGTTTGGGGAGCACCTTGAAGTCCATCCAATCATCATCCTC
CTCTCCCTCGgtacgcaccctccctccctccctccctccctcccttcctc
ccctccctcccttcctcactccctccctttctctccctccctccctttct
ctccctccctccctccctccctccagCCTTTTGGTCCGTCCTCTGGGGCG
TCTCCGGCATGATTCTCTCCGTGCCTCTCATCGCCTGCATGCGCATCGTC
TGCCAGAACCTGCAACACCCTTACGCGAGgtaggaaaagagggaggaaag
gatggaggacgtcaggcttgccattcccacttcaggtttaaatcgcgtcg
tttttcggcttgtcttgccgtcgataaacactctcacctccatttttcaa
aactacctccgtcccacgctccgtccctccctccctccctccctccctcc
ttaccttcctccctccctctctagGGTTGCCGTCCGGATCATGGAAGGGC
GCATTTTGGACTTTGACTTTGATGGGCACACTAGCATCATTAACACCGGC
TTTAAGGACAAGGAGGGACCCAGgtgaggaacggagagagggaggaagag
agtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagtgagggag
tgagtgagtgagtgagtgagtgagtgagggagggaggatggggagcgaag
gaagggggaaaaaagcagaataggtctcactttctccacgtgtcctgaca
ttacagGCATCATCAAAGATCAGCATCGGAAGTTGTTTCTGTGCAGCCTG
CGTGCTCGGCGCCGTTTTTGGGAGGAGGAGGAGGGGGAGAGAGAATAGGT
GCAGCATATAAACATGCACTTTAG
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protein sequence of NO13G03180.1

>NO13G03180.1-protein ID=NO13G03180.1-protein|Name=NO13G03180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=561bp
MDPLRPGPGGSTSSGTISLGVSEARFPPTYGSVDDGGIGMVNRSGWRDGG
KESGFPPLRRSYSLSAIREGVPTLGRHENLVAVCLLIMALLCLGIILFVL
RPILIPFAVSLLFYYLLQPVVNTLNKPPAICCRELYVGCAELGAPVSDEG
EGSMASSSIGGRFLSRAVGGLRRRAGYDTVASDEEEGKEGGREGGRGGGR
TTSPLSTFTEGGSVVGEGGAWERMHCPRPLAVMLAIALAMGVFALFGMII
YHSIQRLQKDWPIYEMGAEQAVQRLNAGLAKLHVSLNDDLVPYLMDNLKS
DIPALVSDVWVAVANGILVLIFLVYLLGSRPQPLPPGVWRKIDIHIRRYI
RLKTLVCVLIAIFVGVCLSLLRVPFAGLFSLVTFVLNYIPNFGPIVATLL
PLPLVLFSPDLSDAAKVLAFFLPSLGHVFVGYYLEPRLFGEHLEVHPIII
LLSLAFWSVLWGVSGMILSVPLIACMRIVCQNLQHPYARVAVRIMEGRIL
DFDFDGHTSIINTGFKDKEGPRHHQRSASEVVSVQPACSAPFLGGGGGGE
RIGAAYKHAL*
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