NO13G02980, NO13G02980 (gene) Nannochloropsis oceanica

Overview
NameNO13G02980
Unique NameNO13G02980
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3435
Alignment locationchr13:831392..834826 +

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial carrier domain-containing protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:831392..834826 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO13G02980 vs. NCBI_GenBank
Match: CBN78569.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 343.6 bits (880), Expect = 5.800e-91
Identity = 171/269 (63.57%), Postives = 205/269 (76.21%), Query Frame = 0
Query:   11 SSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            SST  +  P   EIL KS  RALGGG AGA AMGINVG LMW+RTT+NYQ R G     A +TLY+ GGI RFY+G+ PAL+QGP SRFGDTAAN GV+ L++S+  TK+LPV  KT  AS  AA WRIFLMPVDT KTI QVEGK+GF  L+ K+K+ GP V+YHGALAA +A L+GHYPWF TYNY+QE +PK D    KL RN +IGF +S +SDT SNS+RVVKVYKQ++ E +TY  AV+ +IA+DGL+GLFGRGL TKI +NG
Sbjct:    2 SSTSPKAPPTTQEILDKSLKRALGGGFAGALAMGINVGTLMWMRTTINYQLRHGGGTMDAFRTLYSQGGIGRFYRGVGPALIQGPMSRFGDTAANTGVLALMESYESTKNLPVGAKTLCASVAAALWRIFLMPVDTTKTIMQVEGKEGFPALVKKVKVGGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGIKKLARNGIIGFCSSVVSDTCSNSIRVVKVYKQSHTEGVTYVQAVRDVIAKDGLVGLFGRGLKTKIMANG 270          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: KDD75437.1 (hypothetical protein H632_c685p1 [Helicosporidium sp. ATCC 50920])

HSP 1 Score: 343.2 bits (879), Expect = 7.600e-91
Identity = 173/277 (62.45%), Postives = 211/277 (76.17%), Query Frame = 0
Query:    3 STAPSASPSSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            S +  A   S  ++P   + E+LK +G RALGGG+ GAAAMGI V +LMWLRTTVNYQYR GTT  VALKTLY +GG+ RFY+GL PALVQGP SRFGDTAANAGV+TLL+  + T+D+P+ +KTAAASA A  +RIFLMPVD +KTI QVEGK GF  L AK+++ GP V+YHGA+AA AA   GHYPWF TYNY+   LP+ D+   KL R+AVIGFSASAISDT+SNS+RVVK  KQ     +TYP  V+ ++ EDG++GL GRGL TKI +NG
Sbjct:   42 SQSRRALAHSPSEKPAQPLSEVLKNAGRRALGGGVPGAAAMGIQVLSLMWLRTTVNYQYRYGTTTTVALKTLYKEGGVVRFYRGLGPALVQGPLSRFGDTAANAGVLTLLNEHSSTRDMPIALKTAAASAAAGGFRIFLMPVDAMKTIMQVEGKGGFGKLAAKVRVGGPSVLYHGAIAAAAATWAGHYPWFFTYNYLDAQLPRYDELHKKLLRSAVIGFSASAISDTISNSIRVVKTTKQTATTPMTYPQVVRMVVKEDGVLGLMGRGLKTKILANG 318          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: XP_001746306.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88693.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 331.6 bits (849), Expect = 2.300e-87
Identity = 162/262 (61.83%), Postives = 200/262 (76.34%), Query Frame = 0
Query:   18 KPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            KP + ++L K+G RA+GGG AGAAAMG+ V +L+WLRT +NYQYR G ++R  ++TLYA+GG+ RFYQGLLPAL QGP +RFGDTAANAG + LLDS+  T  LPV VKT AAS  AA WR+FLMP+DT KTI QVEGK G   L AK+++ GPGV+YHGALAA +A   GHYPWFAT+N +QE++P+ +    K  RNA IGF AS +SDTVSNS+RV KV KQA  E ITY  AVK +IA+DG+ GL  RGL T+I +NG
Sbjct:   25 KPELSQVLAKAGKRAMGGGAAGAAAMGVQVVSLLWLRTIMNYQYRNGGSLRAVVRTLYAEGGVLRFYQGLLPALAQGPLARFGDTAANAGTLALLDSYEVTASLPVGVKTVAASGAAAFWRVFLMPIDTCKTIMQVEGKQGLSKLGAKIRVGGPGVLYHGALAAMSATFAGHYPWFATFNILQESIPQQEGVWGKFARNAGIGFCASVVSDTVSNSIRVTKVAKQAATESITYMQAVKGVIAKDGIAGLMFRGLQTRILANG 286          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: XP_011396677.1 (hypothetical protein F751_6767 [Auxenochlorella protothecoides] >KFM23799.1 hypothetical protein F751_6767 [Auxenochlorella protothecoides])

HSP 1 Score: 328.6 bits (841), Expect = 1.900e-86
Identity = 166/259 (64.09%), Postives = 202/259 (77.99%), Query Frame = 0
Query:   21 IGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            + ++L+ +G +ALGGG+ GAAAMGI V +LMWLRTTVNYQYR G T   A+KTLY +GG+ RFY+G+ PAL+QGP SRFGDTAANAGV+TLL+  A TKDLP+ +KTAAASA A  +RIFLMPVD LKT  QVEGK+G  +LM+K++  G  V+YHGALAA AA   GH+PWFATYNY+ E LP+  D   KL R+AVIGF ASAISDTVSNS+RVVK  KQ +A  +TYP+ V   I EDG++GL GRGL TKI +NG
Sbjct:   53 LSQVLRNAGKKALGGGIPGAAAMGIQVVSLMWLRTTVNYQYRYGMTTTAAMKTLYKEGGVLRFYRGVGPALIQGPMSRFGDTAANAGVLTLLNESASTKDLPIPIKTAAASAAAGGFRIFLMPVDALKTTMQVEGKNGIPILMSKIRTGGVSVLYHGALAAAAATWAGHFPWFATYNYLNEVLPQYTDLPRKLGRSAVIGFCASAISDTVSNSIRVVKTTKQTSAVPMTYPEMV---IKEDGILGLMGRGLKTKILANG 308          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: XP_002292654.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89850.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 327.4 bits (838), Expect = 4.300e-86
Identity = 162/264 (61.36%), Postives = 205/264 (77.65%), Query Frame = 0
Query:   16 QPKPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            +P+P +GEIL K+   A+ GG AGA AMG+NVGALMW+RTTVNYQYR GT+  VALKTLYADGGIPRFY+G+LPAL+QGP SRFGDTAAN G++TL++SF  TKDL V  KT AAS  AA++RIFLMPVDT+KT  QV GK  F  ++ K+KI G   +YHG+LAA +A  +GHYPWF TYNY+ E +PK DD   +L R A++GF +SA+SDT SNS+RV+KVYKQ++   ++YP+ V+ +I E G+ GL  RGL TKI +NG
Sbjct:   10 KPQPTLGEILDKAAKSAMRGGTAGAVAMGLNVGALMWMRTTVNYQYRNGTSFPVALKTLYADGGIPRFYRGVLPALIQGPLSRFGDTAANTGMLTLMNSFDATKDLNVGYKTVAASGAAAAFRIFLMPVDTVKTTMQVTGK--FSNVVNKVKIEGIPALYHGSLAAASATFVGHYPWFFTYNYLSEKIPKQDDPLKELGRRAILGFCSSAVSDTCSNSIRVIKVYKQSSEVALSYPEVVRNVIKESGISGLMFRGLETKILANG 271          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: PSC76543.1 (mitochondrial carrier [Micractinium conductrix])

HSP 1 Score: 322.0 bits (824), Expect = 1.800e-84
Identity = 166/274 (60.58%), Postives = 208/274 (75.91%), Query Frame = 0
Query:    6 PSASPSSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            P+A+ SS   +P   + + L+++G RALGGG+ GAAAMG+ V +LMWLRTTVNYQYR GT+M  ALK LY DGG+ RFY+GL PAL+QGP SRFGDTAANAG++ LL    E  DLPV +KT AAS  AA++RI LMPVD  KTI QVEGK GF  L+AK+++ GP V+YHGALAA AA  +GHYPWF  YN + E+LP+ DD   +L R+A IGF ASA+SDT SNS+RVVK  KQ     ++YP+AVK ++A+DG++GLFGRGL TKI +NG
Sbjct:  475 PAAAYSSKEKEP---LADTLRRAGKRALGGGIPGAAAMGVQVLSLMWLRTTVNYQYRYGTSMSQALKHLYKDGGVVRFYRGLGPALLQGPLSRFGDTAANAGMLALL----EGVDLPVALKTVAASGAAAAFRIVLMPVDAAKTIMQVEGKGGFSKLLAKVRVGGPTVLYHGALAASAATFVGHYPWFFVYNSLNESLPQYDDLPKRLLRSAFIGFCASAVSDTCSNSIRVVKTTKQTATVPLSYPEAVKEVVAKDGVVGLFGRGLKTKIVANG 741          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: XP_004987768.1 (MC family transporter [Salpingoeca rosetta] >EGD81234.1 MC family transporter [Salpingoeca rosetta])

HSP 1 Score: 320.9 bits (821), Expect = 4.100e-84
Identity = 156/261 (59.77%), Postives = 197/261 (75.48%), Query Frame = 0
Query:   19 PNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            P++ E+L K+G RALGGG AGAAAM   V  LMWLRTT+NYQYR GT+   A+K LY  GG+ RFY+G+ PAL+QGP SRFGDTAAN G++TLLDS+  T+ LPV VKT AAS TAA WR+ LMP+DTLKT+ QVEG DG   L AK+K  GP V+YHG+LAA +A  +GH+PWFAT+NY+   +P+ +D   KL R A IGF +S ISDT SNS+RV KV KQA+ + ITY  AV+ +I++DG+ GLF RGL T++ +NG
Sbjct:   10 PSVQEVLAKAGKRALGGGGAGAAAMVTQVCTLMWLRTTMNYQYRYGTSTPAAIKALYKQGGVLRFYRGIGPALLQGPLSRFGDTAANTGILTLLDSYESTRSLPVAVKTVAASGTAALWRVVLMPIDTLKTVMQVEGHDGMTKLRAKLKAGGPRVLYHGSLAALSATFVGHFPWFATFNYLNATIPEAEDKWAKLARRAAIGFCSSVISDTTSNSIRVTKVTKQAHTKPITYVQAVREVISKDGVSGLFFRGLGTRLIANG 270          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: GBG29110.1 (Solute carrier family 25 member 38-like [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 316.2 bits (809), Expect = 1.000e-82
Identity = 165/280 (58.93%), Postives = 209/280 (74.64%), Query Frame = 0
Query:    5 APSASPSSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQE--ALPKTDD---FKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            A +A  +      K ++GEIL+++G RA+GGG+ GA AMG+ V +LMWLRTTVNYQYR G TMR A  TLY +GGI RFY+G+ P L QGP SRFGDTA+NAG++ LLDS   T  LPV VKTAAAS +AA++RIFLMP+D  KT  QV GKDG ++L +KMK+ GP V++ GAL + +A  +GHYPWF TYN + E   +P  DD      KL RNAVIGFSASA+SDTVSNS+RV+KV KQ +AE ITYP+A ++++A+DGL G+F RGL TKI +NG
Sbjct:   47 AAAAKAAPVTPVQKESLGEILERAGKRAIGGGLPGAMAMGVQVLSLMWLRTTVNYQYRNGGTMREAFSTLYKEGGIRRFYRGVGPGLFQGPLSRFGDTASNAGMLALLDSSETTATLPVAVKTAAASFSAATFRIFLMPIDAAKTSLQVNGKDGLRILSSKMKVGGPQVLWAGALGSASATFVGHYPWFFTYNTLNEMIPMPAEDDPNHTLKKLSRNAVIGFSASAVSDTVSNSIRVLKVTKQTSAEPITYPEAFRQVVAKDGLSGVFFRGLQTKILANG 326          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: XP_014152214.1 (hypothetical protein SARC_09248 [Sphaeroforma arctica JP610] >KNC78312.1 hypothetical protein SARC_09248 [Sphaeroforma arctica JP610])

HSP 1 Score: 315.1 bits (806), Expect = 2.200e-82
Identity = 163/265 (61.51%), Postives = 194/265 (73.21%), Query Frame = 0
Query:   16 QPKPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKT--DDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSN 279
            +PK ++ EIL  +G RA+GGG+ GA AMGINV +LMWLRTT+NYQYR GT+   A K LY +GGI RFY+G  PAL QGP SRFGDTAANAGV+ LLDS+  T +LPV VKT  ASA AA+WR+FLMPVDTLKT  QVEG  G   L  K+   GP V+Y GA+AA  A  +GHYPWF  YN +QE LPK   D+   KL RNAVIGF AS +SDT SNS+RVVK  KQ  A  ++YP+ VK +I +DGLIGLFGRGL T+I +N
Sbjct:   13 KPKKSLQEILTAAGKRAIGGGVPGAVAMGINVTSLMWLRTTMNYQYRYGTSTTEAFKHLYKEGGIRRFYRGYGPALFQGPLSRFGDTAANAGVLALLDSYDTTSNLPVGVKTIFASAAAATWRVFLMPVDTLKTTMQVEGAKGVSQLRGKLSSGGPKVLYSGAIAASGATFVGHYPWFFVYNLLQEKLPKAEKDETLKKLGRNAVIGFCASVVSDTCSNSIRVVKTTKQTAAVQMSYPETVKMVIKQDGLIGLFGRGLKTRILAN 277          
BLAST of NO13G02980 vs. NCBI_GenBank
Match: XP_002181098.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47750.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 314.7 bits (805), Expect = 2.900e-82
Identity = 158/279 (56.63%), Postives = 207/279 (74.19%), Query Frame = 0
Query:    1 MASTAPSASPSSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGALMWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFGDTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTIKQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQEALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITYPDAVKRIIAEDGLIGLFGRGLSTKIFSNG 280
            M+S+A SA+P+   +  +P+  EIL KS   A+ GG AGA AMG NV ALMW+RTT+NYQYR GT+  VAL+ LYADGGIPRFY+G+LPAL QGP SRFGDTAAN G++T+L+S   TKD+ +  KT AAS  AA +RI +MP+DT+KT  QV GK  F  ++ K+K++GP  +Y+G+LAA +A  +GHYPWFATYN++ E +PK D    +L R A++GF +SAISDT SNS+RVVKVYKQ++ E +TY   V  ++ E G+ GLF RGL TKI +NG
Sbjct:    1 MSSSASSAAPAPGKESTQPSFREILNKSAASAVRGGTAGAVAMGANVAALMWMRTTINYQYRNGTSFPVALRALYADGGIPRFYRGVLPALAQGPLSRFGDTAANTGILTMLNSLDATKDINIGFKTVAASTAAALFRIVIMPIDTVKTTMQVTGK--FSNVVDKVKVNGPFALYNGSLAAASATFVGHYPWFATYNFLSEKIPKQDTQLAELGRRAIMGFCSSAISDTCSNSIRVVKVYKQSHPEQLTYAKVVSNVLQESGVRGLFFRGLETKILANG 277          
The following BLAST results are available for this feature:
BLAST of NO13G02980 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN78569.15.800e-9163.57conserved unknown protein [Ectocarpus siliculosus][more]
KDD75437.17.600e-9162.45hypothetical protein H632_c685p1 [Helicosporidium ... [more]
XP_001746306.12.300e-8761.83hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_011396677.11.900e-8664.09hypothetical protein F751_6767 [Auxenochlorella pr... [more]
XP_002292654.14.300e-8661.36predicted protein [Thalassiosira pseudonana CCMP13... [more]
PSC76543.11.800e-8460.58mitochondrial carrier [Micractinium conductrix][more]
XP_004987768.14.100e-8459.77MC family transporter [Salpingoeca rosetta] >EGD81... [more]
GBG29110.11.000e-8258.93Solute carrier family 25 member 38-like [Aurantioc... [more]
XP_014152214.12.200e-8261.51hypothetical protein SARC_09248 [Sphaeroforma arct... [more]
XP_002181098.12.900e-8256.63predicted protein [Phaeodactylum tricornutum CCAP ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001592NSK001592Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02980.1NO13G02980.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G02980.2NO13G02980.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|249735gene_9010Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101212g1gene8476Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02980.1NO13G02980.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G02980.2NO13G02980.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02980 ID=NO13G02980|Name=NO13G02980|organism=Nannochloropsis oceanica|type=gene|length=3435bp
ACAGGTCTCGCGTCGTTTTCCGGGCTTCTGAGCCTCTACAAAGGGAAAGA
AAAACCAAAGGAAGGCATGTTGAGCCCGACGGATCATGGTCGTCGTGTGG
TCGGGTCAACACTAAAGCCCACGGCAAACGCACGCCACGCCACCCCCAAG
CCCTCTTCGGCATGCTGTATCATAAGGCCTTAGGTCTCGACATGTATCCT
TGCTGGTTCGGCGAGGACGACTTTGTCTCATCTCTCTCGTCGCTTTCTGG
ATCGAGTCGTCGCCGTTGCCTTGCGAGCAGCGAGGAGCAAGTACGCCTCG
CTTTGATATTTATTGGTATGGCTGATGGTGCCTGTGGATGTGCTGAGGCG
GCAACTCCTGCCTTGTGTTTTCAAAGAGCGCTGTGGAGATGGAACGCCCC
TTGATTGTCGATGTGTCGCAGCTGCTGCAGTAGCACCTGTCGCTTCGCTG
CAGTACACAATGCAAGTGATCGTCGCCTTGCTGTTATTGGTATGGGGCCA
ATGCAGCAACTGGCTCAGTACATTTGAGGGAATGAAGCTGGAGGGTGGTT
GGGCTGCTGCCATAGCTGCTGCGTCCCTTGGGGGAGGGGAGGAGAGGAGT
GGGGAGTGGGGGCTACCCACGCACGAATTCATTTTCTTTCCTCCTCGGAA
TAAGACAGATAGTCAAGCGCTCACTGAAACAAACGTGCGCATGGCAGCAG
ACATGCCCAACTTTTGGGCCTAAGCACCGTGTCCTCGGATAGCTCCGTGG
CCAAGCCCTTCCCCTCCATTACTTCGCTCACCCCACTCCTCCCTTCCCAC
TCCATCATCATCCACAGCACCTTTTTTTTTCCTTTCCGACCATGGCGTCC
ACTGCCCCTTCCGCCTCCCCTTCCTCCACGGGTGACCAACCCAAGCCGAA
CATCGGCGAGATACTGAAAAAGTCGGGTATGCGCGCCCTGGGAGGTGGGA
TGGCCGGCGCGGCTGCCATGGGTATCAACGTGGGGGCATTAATGTGGCTC
CGGACCACGGTGAACTACCAGTACCGTAAGgtgaggagataatgtatgta
ttatcataatgcacgtgtgtgtctgatcacatcgtcctcgctcccctttc
tcctccagGGCACCACCATGCGCGTGGCCCTCAAGACGCTCTACGCCGAC
GGTGGCATTCCCCGCTTTTATCAAGGCCTCCTTCCCGCCCTTGTCCAGGG
ACCGGCCTCTCGATTCGGAGACACGGCGGCAAATGCGGGGGTGATCACGC
TGCTGGACTCGTTCGCAGAGACCAAGgtgatgaggaaggggaaaggggaa
gggggggcgaatgggagggagagaaggaaggcaggggtccatatcttcat
gtctttctcttcggcttaattaatttctgtatctttaagaagagtagcat
aaaatgccttttttctttgctctttccccccttattgccgcctcgctgct
catcatcgtcatcgtcctccctcccctctctctcctttccccagGACCTC
CCCGTCCTGGTCAAGACGGCCGCTGCCTCGGCCACTGCCGCCTCCTGGCG
CATTTTCCTCATGCCTGTTGATACTTTGAAGACGATCAAGCAAGTGGAGG
GCAAAGATGGCTTCAAGGTGCTCATGGCCAAGATGAAGgtccgtcccctc
cctcccccctgccccccttctcatctccttttgttgctggtctgcgacct
acataaaaaaatatggcgtatacacatatgttcacacacactcacacata
catacacatcttcatgcatgtatacatacgtatatacatacacatataca
tatatatattcatacatacatgcctacatatacaccgtagATTCACGGGC
CGGGCGTAATGTACCACGGTGCCCTGGCCGCCTTTGCCGCTAATTTACTA
GGGCACTACCCGTGGTTTGCCACCTATAACTACATGCAGGAGGCCCTGCC
CAAGACGGATGACTTCAAGTTGAAGCTGTGCCGTAATGCTGTCATCGGTT
TCAGTGCCTCGGCCATCTCGGACACTGTCTCCAACAGCGTCCGCGTGGTG
AAGgtgaggcaggagggagggagggagggtgagagcgagggagggtgaca
gcggccgattatttgccgtgtttctcttcttttcgctctattctttttcc
ccttctccaaatctgaacggcctgccacttatgtcactccttcctcccct
cgctccccccctccctccccccctccctcagGTCTACAAGCAAGCCAACG
CGGAGCACATCACTTACCCCGACGCCGTGAAGCGCATCATTGCTGAGGAC
GGGCTCATCGGTCTTTTCGGGCGGGGGCTCAGCACCAAGATTTTTTCCAA
CGgtaagtaagcgtgccgtccctctctccttgtcttctctacctccctct
cgaccgcccttgttggcgtatgtgtgagaataagaagacgagggtcggcg
gacgcatcggacggggtctcatcactaagactgataaggtacaattgtct
ctcccttttcgagaagacgttactacattctccttcccatccctctttct
cttctcccttctctctcgatctactttccgtccgcttgcccacagccatt
gcctgaccatcttccacccatttctcccttcctccctccctccttccctt
cctccctcagGGTTGCAAGGACTCGTGTTTTCAGTCTTGTGGAAGCTGAT
CGACGACCACCTGAAGGAGAAAGCTATCCTCTAAGGGACGGGAGGAAGGC
AGGGCGGGAGGGGCGGCTAATTTGTAGAAGGCCAAGGCCGTGACTGTTGC
CGATGGCGGGAGGAACAGAAACGGGCCGGAAAAGAAGAAGTTGAGGAAAA
CAAAATGCGTGGTAAAAAAATAAAGTGGATGAAGAGAAGAACAGGGAAGA
GGGAAATATAAGACACGTCTTGGAAGAAAGAGAGGTTGTTGCCGGTAGAT
CCTCTTGCGGCATCTAGCTCCTCAAGATTAACACCACTTACCATCAAATC
AAATAGAACGGCCTCCGCGGCCATTAAGACAAAGAACGATAAGCAGGCGC
CATGAAGAATGGAAACGGGTTACATTCGCGGCATAAACGTTTAAAGTATG
TGGCTGTAGTGGCCTGTGCGTCTGTGCGTATGTGTGTGAGCATGATTGAC
AGCAAAAGTGACGGTAACTGAAGGAGATGAGGGGGAAATCAGCCCAGTAG
TTCAATTTCGTTCGAGGGATGGAGTGGAGGAGTATAACAGGAGACGAGGA
GAAGGTAACTTAAGATTAAAGTAAGTGTCGAGGCGAAAAGGAAGAAGTAT
AAAAAGAAGAAGAAACTCACACACATACATGCGCGCATATACACAAGAAC
ACGCGCCCCCCCCCTCCACTTCCAAACAAATGACACAAAAACATTCACTG
ACAGCACAAACGCAAATCATATGGCTAAGGCAACC
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protein sequence of NO13G02980.1

>NO13G02980.1-protein ID=NO13G02980.1-protein|Name=NO13G02980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=303bp
MASTAPSASPSSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGAL
MWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFG
DTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTI
KQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQ
EALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITY
PDAVKRIIAEDGLIGLFGRGLSTKIFSNGLQGLVFSVLWKLIDDHLKEKA
IL*
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protein sequence of NO13G02980.2

>NO13G02980.2-protein ID=NO13G02980.2-protein|Name=NO13G02980.2|organism=Nannochloropsis oceanica|type=polypeptide|length=281bp
MASTAPSASPSSTGDQPKPNIGEILKKSGMRALGGGMAGAAAMGINVGAL
MWLRTTVNYQYRKGTTMRVALKTLYADGGIPRFYQGLLPALVQGPASRFG
DTAANAGVITLLDSFAETKDLPVLVKTAAASATAASWRIFLMPVDTLKTI
KQVEGKDGFKVLMAKMKIHGPGVMYHGALAAFAANLLGHYPWFATYNYMQ
EALPKTDDFKLKLCRNAVIGFSASAISDTVSNSVRVVKVYKQANAEHITY
PDAVKRIIAEDGLIGLFGRGLSTKIFSNGK*
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