NO13G02850, NO13G02850 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02850 vs. NCBI_GenBank
Match: XP_005852774.1 (hypothetical protein NGA_0685100 [Nannochloropsis gaditana CCMP526] >EKU23056.1 hypothetical protein NGA_0685100 [Nannochloropsis gaditana CCMP526] >EWM21949.1 protein of unknown function DUF2059 [Nannochloropsis gaditana]) HSP 1 Score: 231.5 bits (589), Expect = 2.400e-57 Identity = 122/198 (61.62%), Postives = 153/198 (77.27%), Query Frame = 0 Query: 4 MAPWLVHLTLALGAVLMCL----PGAAALKDTIKNRMKLADKYMDENPVDEGMEAMARQHMLKMPDPKEREQLMKNMQQMDTGKVRTITRQAMVKHFTVDELEYLINMYSTHTGKTLMSKIGAYSAEIQPQIADVMKDIMENNVVFYQEQEKRARAGELDHVTTEFDKEKKPEAIQLPPMNQKIKDGVYMGSSMKDAR 198 MA LVH++LALG L+ L ALKDT+KNRMKLAD+Y+ ENPV+E ME MARQHMLKMPDPKEREQLM+N++ +D VR ITR AMVKHFT +ELE+LINMYST GK++M+KIGAYSAE+ PQI +VM +ME+NV FYQEQE+RA+ GEL+ + PE I+LPP +QK+KDGVYMG+ + +A+ Sbjct: 1 MASRLVHVSLALGTTLLILCLSMTMVGALKDTVKNRMKLADQYIFENPVEENMEGMARQHMLKMPDPKEREQLMRNLETLDMDHVRRITRHAMVKHFTTEELEFLINMYSTSVGKSVMAKIGAYSAELGPQIQEVMMPVMESNVEFYQEQERRAKRGELNDL---------PETIKLPPQSQKLKDGVYMGNGLSNAQ 189
BLAST of NO13G02850 vs. NCBI_GenBank
Match: WP_012529913.1 (DUF2059 domain-containing protein [Geobacter bemidjiensis] >ACH38501.1 hypothetical protein Gbem_1483 [Geobacter bemidjiensis Bem]) HSP 1 Score: 69.3 bits (168), Expect = 1.500e-8 Identity = 49/137 (35.77%), Postives = 77/137 (56.20%), Query Frame = 0 Query: 18 VLMCLPGAAALKDTIKNRMKLADKYMDENPVDEGMEAMARQHMLKMPDPKEREQLMKNM-QQMDTGKVRTITRQAMVKHFTVDELEYLINMYSTHTGKTLMSKIGAYSAEIQPQI-ADVMKDIME-NNVVFYQEQEK 152 VL+ + A AL+DT NR+ A++Y++ P + ++ A Q + DP ER+ M + +D + + MVKHFT DEL+ L + Y + GK+ M K GAY A++ P I A+++K I + N V E+EK Sbjct: 11 VLLMVSVAFALEDTSLNRLTQAERYLEVTPPKDLLQDAAEQMAMNF-DPSERQAFKDLMTKHLDIEALTKTMKDTMVKHFTADELKALADFYGSVEGKSSMKKFGAYMADVMPSIQAEMLKAISKANREVADTEEEK 146
BLAST of NO13G02850 vs. NCBI_GenBank
Match: WP_012173848.1 (DUF2059 domain-containing protein [Desulfococcus oleovorans] >ABW66229.1 conserved hypothetical protein [Desulfococcus oleovorans Hxd3]) HSP 1 Score: 65.1 bits (157), Expect = 2.900e-7 Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 0 Query: 17 AVLMCLPGAA-ALKDTIKNRMKLADKYMDENPVDEGMEAMARQHMLKMPDPKEREQLMKNM-QQMDTGKVRTITRQAMVKHFTVDELEYLINMYSTHTGKTLMSKIGAYSAEIQPQI-ADVMK----DIMENNVVFYQEQ 150 A ++C+ A AL+DT NR K A +Y+ P + M+ MA++ + +P P+ RE+ + + +D I + +M KHFT DEL+ L + Y + GK+ M+K G Y +I P I A+++K I EN Q+Q Sbjct: 7 AFIICIAATAFALEDTPSNRQKEAARYLKTTPPADMMKDMAQKVSMNLP-PENREEFKALLTKHLDLEAFTKIMKDSMEKHFTADELKALADFYGSPVGKSAMNKFGDYMGDIMPAIQAELLKAHAEAIKENXXANRQKQ 145
BLAST of NO13G02850 vs. NCBI_GenBank
Match: WP_015720644.1 (DUF2059 domain-containing protein [Geobacter sp. M18] >ADW13794.1 Protein of unknown function DUF2059 [Geobacter sp. M18]) HSP 1 Score: 65.1 bits (157), Expect = 2.900e-7 Identity = 41/133 (30.83%), Postives = 64/133 (48.12%), Query Frame = 0 Query: 9 VHLTLALGAVLMCLPGAAALKDTIKNRMKLADKYMDENPVDEGMEAMARQHMLKMPDPKEREQLMKNM-QQMDTGKVRTITRQAMVKHFTVDELEYLINMYSTHTGKTLMSKIGAYSAEIQPQIADVMKDIME 141 + +A VL+ A L DT+ NR ++Y+ P E + M + ++P P+ RE M + +D + T AMVKHFT DEL L N Y + GK+ M K Y A++ P + + ++ E Sbjct: 4 IRFVMAAALVLLLASQAFCLDDTVANRKVQVERYLKAVPPAELFQDMTEKLATQVP-PENREMFKATMSKNLDLNAITKATSDAMVKHFTADELAALANFYGSPVGKSAMKKFADYMADVMPTLQEELEKAAE 135
BLAST of NO13G02850 vs. NCBI_GenBank
Match: WP_103017765.1 (DUF2059 domain-containing protein [Salinibacter ruber]) HSP 1 Score: 64.7 bits (156), Expect = 3.800e-7 Identity = 42/116 (36.21%), Postives = 65/116 (56.03%), Query Frame = 0 Query: 30 DTIKNRMKLADKYMDENPVDEGMEAMARQHMLKMP-DPKEREQLMKNMQQMDTGKVRTITRQAMVKHFTVDELEYLINMYSTHTGKTLMSKIGAYSAEIQP----QIADVMKDIME 141 DT NR + A KY++ PV++ M + + +MP KER Q + + + DT +RT AM FTV+E+E L YST G+++M K+ Y A++QP ++ MK +ME Sbjct: 31 DTDANRRQAAKKYLEVQPVEKMMRKVVEKTSARMPGGSKERAQAVMDELRYDT--LRTAMIDAMANTFTVEEIEALTQFYSTPEGRSVMEKMSTYMAKVQPVMMKEVRRSMKQVME 144 The following BLAST results are available for this feature:
BLAST of NO13G02850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02850 ID=NO13G02850|Name=NO13G02850|organism=Nannochloropsis oceanica|type=gene|length=1946bpback to top protein sequence of NO13G02850.1 >NO13G02850.1-protein ID=NO13G02850.1-protein|Name=NO13G02850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=204bpback to top Synonyms
Publications
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