NO13G02830, NO13G02830 (gene) Nannochloropsis oceanica

Overview
NameNO13G02830
Unique NameNO13G02830
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1218
Alignment locationchr13:786888..788105 +

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphoribulokinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:786888..788105 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0005975carbohydrate metabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0008974phosphoribulokinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006083PRK/URK
IPR006082PRK
Homology
BLAST of NO13G02830 vs. NCBI_GenBank
Match: EWM21954.1 (phosphoribulokinase [Nannochloropsis gaditana])

HSP 1 Score: 688.0 bits (1774), Expect = 1.800e-194
Identity = 332/364 (91.21%), Postives = 347/364 (95.33%), Query Frame = 0
Query:    1 MVKTAAVGLLALAGLTSAFVPTNTNLRMSNKWVTKAKDASFTRNLMMKLGAGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTELTNDPEGKILRVRLIQKDDGKYEPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKG 365
            MVKTAAV LLALAGL SAFVP  TN R +N+W  KAKD SFTRNLMMKLGA +KVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDR GRK+TGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLD+PE+VVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTL+QVEAEIEKRKPDFNKFVGPQKEVAD+VIQVLPTELTNDPEGKILRVRLIQK+ G YEPVYLFDQGSTVSW+PCG +LTCSYPGIK GSGPD+WFNNAVN+VEMDGQFD LEEL+YVEKHLGNTASKY GEITAQMLKN+G
Sbjct:    1 MVKTAAVSLLALAGLASAFVPPTTNFRSANRWTIKAKDTSFTRNLMMKLGADDKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRSGRKVTGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDRPEEVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLEQVEAEIEKRKPDFNKFVGPQKEVADSVIQVLPTELTNDPEGKILRVRLIQKETGDYEPVYLFDQGSTVSWIPCGTKLTCSYPGIKLGSGPDRWFNNAVNVVEMDGQFDKLEELAYVEKHLGNTASKYDGEITAQMLKNEG 364          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: CBN76689.1 (Phosphoribulokinase [Ectocarpus siliculosus])

HSP 1 Score: 521.5 bits (1342), Expect = 2.300e-144
Identity = 250/378 (66.14%), Postives = 305/378 (80.69%), Query Frame = 0
Query:   34 TKAKDASFTRN-------LMMKLGAGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTEL-TNDPEGKILRVRLIQKDD-GKYEPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDASVKAP 403
            TKA+  + +R+       L MKLG  EKV+LIGVAADSGCGKSTFMRRLT+IFGG  VGPLGGGFDNGGWETN+LVSD TTV+CLDDYH NDRGGRK++GRTAL   EQ FDLMYEQL  LK GK+V KPIYNHVNGTLD PE++ PTPIVI+EGLHP+ D RV+DLLD+TIYLDISDEIK AWKIQRDM ERG +L+ ++A IE RKPDF+ F+ PQ+  AD VIQVLPT+L   D EGKILR R++QK+    ++P +LFD+GST+SWVPCG++LTCS+PGIKF  GPD +++N V+++EMDGQFDNL+EL YVE HL N  +K+ GE+T  +LK   +PGS NG+G  QT+V+LK+REVYE+++ K V  SVK P
Sbjct:   55 TKARPGTMSRSARARLEALSMKLGEDEKVVLIGVAADSGCGKSTFMRRLTSIFGGDTVGPLGGGFDNGGWETNSLVSDLTTVLCLDDYHLNDRGGRKVSGRTALHTEEQKFDLMYEQLNDLKNGKSVMKPIYNHVNGTLDTPEEIKPTPIVIIEGLHPFVDKRVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAFIAPQRSEADVVIQVLPTQLIPGDTEGKILRTRMVQKEGLDFFDPAFLFDEGSTISWVPCGRKLTCSFPGIKFAYGPDTYYDNEVSVIEMDGQFDNLQELIYVESHLSNIGTKFYGELTQNILKQADSPGSNNGTGFLQTLVALKLREVYERITKKTV--SVKLP 430          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: AAK21910.1 (phosphoribulokinase [Vaucheria litorea] >ABD60353.1 chloroplast phosphoribulokinase precursor [Vaucheria litorea] >AFA52561.1 phosphoribulokinase [Vaucheria litorea])

HSP 1 Score: 511.5 bits (1316), Expect = 2.300e-141
Identity = 256/405 (63.21%), Postives = 318/405 (78.52%), Query Frame = 0
Query:    1 MVKTAAVGLLALAGL-TSAFVPTNTNLRMS---NKWVTKAKDASFTRNLMMKLG-AGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTELT-NDPEGKILRVRLIQKDDGK-YEPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDAS 399
            M+  + + LLA   L   +FV T++ LR S   N   +  K AS  + L MKLG   E V++IGVAADSGCGKSTFMRRLTNIFGGS+VGPLGGGF NGGWETNTLVSD TTVICLDDYH NDR GRK++GRTAL   EQ FDLM EQL ALK G++V KPIYNHVNGTLD PE+V PTPIVI+EGLHP+ D RV+DLLD+TIYLDISDEIK AWKIQRDM ERG +L+ ++A IE RKPDF+ ++ PQ+  AD V+QVLPT+L   D EGKILR RLIQK++ K +E  YLFD+GST++W+PCG++LTCS+PGIKF  GPD +F+N V+++EMDGQFDNL+EL YVE  L NT +K+ GE+T  +LK   +PGS NG+G  QT+++LK+RE+YEK++  + +A+
Sbjct:    1 MLVHSLILLLAAGALHVESFVSTHSALRTSTFTNNAQSLNKAASKLQALEMKLGDPDEPVVIIGVAADSGCGKSTFMRRLTNIFGGSSVGPLGGGFGNGGWETNTLVSDLTTVICLDDYHLNDRNGRKVSGRTALHTDEQKFDLMTEQLSALKRGESVMKPIYNHVNGTLDTPEEVKPTPIVIIEGLHPFVDERVRDLLDFTIYLDISDEIKFAWKIQRDMMERGHSLESIQASIEARKPDFDAYIAPQRAQADVVLQVLPTKLVPEDKEGKILRTRLIQKENVKNFETAYLFDEGSTINWIPCGRKLTCSFPGIKFAYGPDTYFDNEVSVLEMDGQFDNLQELIYVEGFLSNTGTKFYGELTQNILKLSDSPGSNNGTGFLQTVIALKLREIYEKITTSQAEAA 405          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: ABQ42600.1 (chloroplast phosphoribulokinase precursor [Heterosigma akashiwo])

HSP 1 Score: 502.3 bits (1292), Expect = 1.400e-138
Identity = 244/361 (67.59%), Postives = 287/361 (79.50%), Query Frame = 0
Query:   37 KDASFTRNLMMKLGAGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTELTND-PEGKILRVRLIQKD-DGKYEPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKV 396
            K AS +  L M L  GE+V+LIGVAADSGCGKSTFMRRLT +FG   V  LGGGF NGGWETNTLVS +TTVICLDDYH NDR GRK++G TAL   E NFDLMYEQLK LK GKT+ KPIYNHVNGTLD PE+V PTPIVIVEGLHP  D RV +LLD+ IYLDISDEIK AWKIQRDM ERG +L+ ++A IE RKPDF  FV PQ+  +D VIQVLPTEL  D  +GKILRVR+IQK+ +  ++P YLFD+GST+SW PCG++LTCSYPGIKF  GPD +F+N V+++EMDG+FDNLEEL YVE HL  T SK+ GE+  QMLK   +PGS NG+G FQT+ +LK+REVYE ++ K+V
Sbjct:   28 KSASSSSALQMALKEGEEVVLIGVAADSGCGKSTFMRRLTGMFGTDGVQMLGGGFGNGGWETNTLVSPSTTVICLDDYHLNDRNGRKVSGLTALHEKENNFDLMYEQLKELKSGKTIKKPIYNHVNGTLDTPEEVEPTPIVIVEGLHPMLDDRVAELLDFRIYLDISDEIKFAWKIQRDMEERGHSLESIKASIEARKPDFEAFVSPQRAKSDIVIQVLPTELIPDSTDGKILRVRMIQKEGNPNFKPAYLFDEGSTISWTPCGRKLTCSYPGIKFSYGPDTFFDNEVSVIEMDGEFDNLEELVYVESHLSQTGSKFYGELAQQMLKMSNSPGSNNGTGFFQTLTALKLREVYETITKKEV 388          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: GAQ87971.1 (phosphoribulokinase [Klebsormidium nitens])

HSP 1 Score: 469.5 bits (1207), Expect = 1.000e-128
Identity = 241/405 (59.51%), Postives = 301/405 (74.32%), Query Frame = 0
Query:    3 KTAAVGLL------ALAGLTSAFVPTNTNLRMSNKWVTKAKDASFTRNLMMKLGAGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTEL-TNDPEGKILRVRLIQKDDGK-YEPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDASV 400
            +TAAVG        A   ++  F   N   R +     KA        ++ K+  GEK ++IG+AADSGCGKSTFMRRLT++FGG+   P GG  D     +NTL+SDTTTVICLDDYH+ DRGGRK    TAL+   QNFDLMYEQ+KALKEGK V KPIYNHV G LD PE +    I+++EGLHP +D RV++LLD+T+YLDISDE+K AWKIQRDMAERG +L+ ++A IE RKPDF+ F+ PQKE AD VIQVLPT+L  +D EGK+LRVR+IQK+  + ++PVYL+D+GST+SW+PCG++LTCSYPGIKF  GPD ++ N V+++EMDGQFD LEEL YVE HL NT+SK+ GEIT QML++   PGS NG+GLFQTIV LKIRE YEKL+ K V  +V
Sbjct:   50 QTAAVGAFSSEMHSAARQVSEGFFGVNAVARAAAAQGPKASRRPIRALVVCKV--GEKTVVIGLAADSGCGKSTFMRRLTSVFGGAASPPKGGNPD-----SNTLISDTTTVICLDDYHSLDRGGRKREKVTALDPKAQNFDLMYEQVKALKEGKAVDKPIYNHVTGLLDPPERIESPDILVIEGLHPMFDDRVRELLDFTVYLDISDEVKFAWKIQRDMAERGHSLESIKASIESRKPDFDAFIDPQKEKADIVIQVLPTQLIPDDNEGKVLRVRMIQKEGVEGFDPVYLYDEGSTISWIPCGRKLTCSYPGIKFFYGPDTYYGNEVSVLEMDGQFDKLEELIYVESHLSNTSSKFYGEITQQMLRHADFPGSNNGTGLFQTIVGLKIREAYEKLAKKAVAVTV 447          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: EPS63825.1 (phosphoribulokinase, partial [Genlisea aurea])

HSP 1 Score: 466.1 bits (1198), Expect = 1.100e-127
Identity = 224/362 (61.88%), Postives = 287/362 (79.28%), Query Frame = 0
Query:   39 ASFTRNLMMKLGAGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTEL-TNDPEGKILRVRLIQKDDGKY-EPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDAS 399
            A   R ++    A +K ++IG+AADSGCGKSTFMRRLT++FGG+   P GG  D     +NTLVSDTTTVICLDDYH+ DR GRK  G TAL+    NFDLMYEQ+KALK+G  V KPIYNHV+G LD PE + P  I+++EGLHP +D+RV+DLLD++IYLDIS+E+K AWKIQRDMAERG +L+ ++A IE RKPDF+ ++ PQK+ ADAVI+VLPT+L  +D EG++LRVRLI K+  KY  PVYLFD+GST+SW+PCG++LTCSYPGIKFG GPD +F+N V+++EMDGQFD L+EL YVE HL N ++K+ GE+T QMLK+   PGS NG+GLFQTIV LKIR++YE++S  +  A+
Sbjct:   17 AVLPRRIITSCSAEDKTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPD-----SNTLVSDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKALKDGVAVDKPIYNHVSGLLDPPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGRVLRVRLIMKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFGYGPDTYFDNEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEVTQQMLKHSDFPGSNNGTGLFQTIVGLKIRDLYEQISASRASAA 373          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: XP_019445254.1 (PREDICTED: phosphoribulokinase, chloroplastic-like [Lupinus angustifolius] >OIW10703.1 hypothetical protein TanjilG_16075 [Lupinus angustifolius])

HSP 1 Score: 463.8 bits (1192), Expect = 5.600e-127
Identity = 227/353 (64.31%), Postives = 281/353 (79.60%), Query Frame = 0
Query:   54 KVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTEL-TNDPEGKILRVRLIQKDDGK-YEPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDASVKAPVA 405
            + ++IG+AADSGCGKSTFMRRLT++FGG+   P GG  D     +NTL+SDTTTVICLDDYH+ DR GRK  G TAL+    +FDLMYEQ+KA+K+G +V KPIYNHV G LD PE + P  I+++EGLHP YDARV+DLLD++IYLDIS+E+K AWKIQRDMAERG +L+ ++A IE RKPDF+ ++ PQK+ ADAVI+VLPTEL  +D EGKILRVRLIQK+  K + PVYLFD GST+SW+PCG++LTCSYPGIKF  GPD ++ N V+IVEMDGQFD L+EL YVE HL N +SK+ GE+T QMLK+   PGS NG+GLFQTIV LKIRE+YE+L   +  + VKA  A
Sbjct:   61 QTVVIGLAADSGCGKSTFMRRLTSVFGGTAEPPKGGNPD-----SNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKDGISVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDARVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTELIPDDNEGKILRVRLIQKEGVKNFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFAYGPDAYYGNEVSIVEMDGQFDRLDELIYVESHLSNLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRELYEQLVASRAQSPVKAAKA 408          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: KZV51493.1 (phosphoribulokinase, chloroplastic-like [Dorcoceras hygrometricum])

HSP 1 Score: 463.0 bits (1190), Expect = 9.600e-127
Identity = 236/398 (59.30%), Postives = 298/398 (74.87%), Query Frame = 0
Query:   15 LTSAFVPTNTNLRMSNKWV-----TKAKDASFTRNLMMKLGAGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTEL-TNDPEGKILRVRLIQKDDGKY-EPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDASVKAPVAA 406
            L S   P  T+L  S K V     TK K +S      +   A EK ++IG+AADSGCGKSTFMRRLT++FGG+   P GG  D     +NTL+SDTTTVICLDDYH+ DR GRK  G TAL+    NFDLMYEQ+K++K+G  V KPIYNHV+G LD PE + P  I+++EGLHP YDARV+DLLD++IYLDIS+E+K AWKIQRDMAERG +L+ ++A IE RKPDF+ ++ PQK+ AD VI+VLPT+L  +D EGK+LRV+LI K+  KY  PVYLFD+GST++W+PCG++LTCSYPGIKF  GPD ++ N V+++EMDGQFD L+EL YVE HL N ++K+ GEIT QMLK+   PGS NG+GLFQTIV LKIR++YE++    V A   APVAA
Sbjct:   12 LNSISTPPKTHLGFSQKQVIFYTNTKRKPSSKRYGTEISCSA-EKTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPD-----SNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKSIKDGVAVDKPIYNHVSGLLDPPELIKPPKILVIEGLHPMYDARVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADVVIEVLPTQLIPDDNEGKVLRVKLIMKEGVKYFNPVYLFDEGSTINWIPCGRKLTCSYPGIKFAYGPDTYYGNEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEITQQMLKHSDFPGSSNGTGLFQTIVGLKIRDLYEQI----VAARAAAPVAA 399          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: XP_023735084.1 (phosphoribulokinase, chloroplastic [Lactuca sativa] >PLY72843.1 hypothetical protein LSAT_6X17740 [Lactuca sativa])

HSP 1 Score: 462.6 bits (1189), Expect = 1.200e-126
Identity = 223/351 (63.53%), Postives = 282/351 (80.34%), Query Frame = 0
Query:   56 ILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTEL-TNDPEGKILRVRLIQKDDGKY-EPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDASVKAPVA 405
            I+IG+AADSGCGKSTFMRRLT++FGG+   P GG  D     +NTL+SDTTTVICLDDYH+ DR GRK+ G TAL+    NFDLMYEQ+KALK+G  V KPIYNHV+G LD PE + P  I+++EGLHP YD RV+DLLD++IYLDISD++K AWKIQRDMAERG +L+ ++A IE RKPDF+ ++ PQK+ ADAVI+VLPT+L  +D EGK+LRV+LI K+  KY  PVYLFD+GST+SW+PCG++LTCSYPGIKF  GPD +F+N V+++EMDGQFD L+EL YVE HL N ++K+ GEIT QMLK+   PGS NG+GLFQTIV LKIR+++E+L+  K  A ++A  A
Sbjct:   60 IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPD-----SNTLISDTTTVICLDDYHSLDRTGRKVEGVTALDPRANNFDLMYEQVKALKDGIAVDKPIYNHVSGLLDPPELIKPPKILVIEGLHPMYDQRVRDLLDFSIYLDISDDVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGKVLRVKLIMKEGVKYFNPVYLFDEGSTISWIPCGRKLTCSYPGIKFAYGPDSYFDNEVSVLEMDGQFDRLDELIYVESHLSNISTKFYGEITQQMLKHSDFPGSNNGTGLFQTIVGLKIRDLFEQLTAAKASAPLEATKA 405          
BLAST of NO13G02830 vs. NCBI_GenBank
Match: PRW33798.1 (phosphoribulokinase [Chlorella sorokiniana])

HSP 1 Score: 462.2 bits (1188), Expect = 1.600e-126
Identity = 227/355 (63.94%), Postives = 280/355 (78.87%), Query Frame = 0
Query:   43 RNLMMKLGAGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNTLVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEGKTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYLDISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADAVIQVLPTELTND-PEGKILRVRLIQKDDGK-YEPVYLFDQGSTVSWVPCGKQLTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASKYAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKV 396
            RN+++   A +KV++IG+AADSGCGKSTFMRR+T IFGG    P GG  D     +NTL+SD TTVICLDDYH+ DR GRK    TAL+   Q+FDLMYEQ+KALKEGK V KPIYNHV G LD PE++    I+I+EGLHP++D RV DLLD+ IYLDISDEIK AWKIQRDMAERG +L+ ++A IE RKPDF+ F+ PQK+ AD +IQVLPT+L  D  EGKILRVRLI K+  K ++PVYLFDQGSTVSW+PCG++LTC++PGIK   GPD ++   V+++EMDGQFD LEEL Y+E HL NT++K+ GEIT QMLKN   PGS NG+GLFQTIV LK+REVYE+++ K+V
Sbjct:   55 RNVVVVRAADDKVVVIGLAADSGCGKSTFMRRVTGIFGGEPKPPAGGNPD-----SNTLLSDMTTVICLDDYHSLDRNGRKEKAVTALDPRAQHFDLMYEQVKALKEGKPVQKPIYNHVTGLLDPPEEIQAPKILIIEGLHPFFDDRVNDLLDFKIYLDISDEIKFAWKIQRDMAERGHSLESIKASIEARKPDFDAFIDPQKKKADMIIQVLPTQLVPDEKEGKILRVRLIMKEGKKLFDPVYLFDQGSTVSWIPCGRKLTCTFPGIKMFYGPDTYYGEEVSVLEMDGQFDKLEELIYMESHLSNTSAKFYGEITQQMLKNSSFPGSNNGTGLFQTIVGLKVREVYERITEKEV 404          
The following BLAST results are available for this feature:
BLAST of NO13G02830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21954.11.800e-19491.21phosphoribulokinase [Nannochloropsis gaditana][more]
CBN76689.12.300e-14466.14Phosphoribulokinase [Ectocarpus siliculosus][more]
AAK21910.12.300e-14163.21phosphoribulokinase [Vaucheria litorea] >ABD60353.... [more]
ABQ42600.11.400e-13867.59chloroplast phosphoribulokinase precursor [Heteros... [more]
GAQ87971.11.000e-12859.51phosphoribulokinase [Klebsormidium nitens][more]
EPS63825.11.100e-12761.88phosphoribulokinase, partial [Genlisea aurea][more]
XP_019445254.15.600e-12764.31PREDICTED: phosphoribulokinase, chloroplastic-like... [more]
KZV51493.19.600e-12759.30phosphoribulokinase, chloroplastic-like [Dorcocera... [more]
XP_023735084.11.200e-12663.53phosphoribulokinase, chloroplastic [Lactuca sativa... [more]
PRW33798.11.600e-12663.94phosphoribulokinase [Chlorella sorokiniana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR048ncniR048Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001609NSK001609Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02830.1NO13G02830.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|604976gene_9029Nannochloropsis oceanica (N. oceanica CCMP1779)gene
PRKgene8489Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02830.1NO13G02830.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02830 ID=NO13G02830|Name=NO13G02830|organism=Nannochloropsis oceanica|type=gene|length=1218bp
ATGGTCAAGACTGCTGCCGTCGGCCTCCTGGCCTTGGCCGGGCTCACCTC
TGCCTTTGTGCCCACCAACACGAACCTCCGCATGTCTAACAAGTGGGTGA
CCAAGGCCAAGGACGCCTCCTTCACCCGCAACCTGATGATGAAGCTGGGC
GCGGGTGAAAAGGTCATCCTCATTGGTGTGGCCGCTGACTCCGGGTGCGG
CAAGTCCACCTTCATGCGACGCCTGACCAACATATTCGGCGGAAGCAACG
TTGGGCCCTTGGGTGGTGGCTTCGACAACGGCGGATGGGAAACTAATACG
CTTGTGTCCGACACCACCACTGTTATTTGCCTGGATGACTACCATGCCAA
TGACCGTGGGGGCCGCAAGATCACGGGCCGCACTGCCCTTGAGGCGGCGG
AGCAGAACTTCGACCTCATGTACGAGCAGCTTAAGGCCTTGAAGGAGGGC
AAGACGGTGGCCAAGCCCATCTACAATCACGTCAACGGCACCTTGGACAA
GCCAGAGGATGTAGTGCCCACTCCTATTGTCATCGTCGAGGGGCTGCACC
CTTGGTATGATGCCCGTGTGAAGGACCTCTTGGACTACACTATCTACCTG
GACATCTCCGACGAGATTAAGCGTGCCTGGAAAATCCAGCGTGATATGGC
TGAGCGTGGCTGGACTCTGGACCAGGTGGAGGCCGAGATTGAGAAGCGCA
AGCCCGACTTCAACAAGTTCGTGGGCCCCCAGAAGGAGGTCGCCGATGCC
GTCATCCAGGTCCTCCCCACCGAGCTGACCAACGACCCGGAAGGCAAGAT
CCTCCGTGTGCGTCTCATCCAGAAGGATGACGGGAAATACGAGCCCGTCT
ACCTGTTCGATCAGGGCTCCACAGTCTCGTGGGTGCCCTGCGGGAAGCAG
CTCACCTGCTCTTACCCCGGCATCAAGTTCGGCTCCGGCCCTGACCAGTG
GTTCAACAACGCCGTGAACATCGTGGAGATGGACGGCCAGTTCGACAACT
TGGAAGAACTGTCTTACGTGGAGAAGCACCTCGGGAACACGGCCTCCAAG
TACGCAGGAGAGATCACGGCGCAGATGTTGAAAAACAAGGGGGCTCCGGG
TAGCTTGAACGGCTCGGGCTTGTTCCAGACAATCGTGAGCTTGAAGATTA
GGGAGGTCTACGAGAAGCTGAGCGGAAAGAAGGTGGATGCCTCGGTGAAG
GCGCCGGTGGCGGCTTAA
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protein sequence of NO13G02830.1

>NO13G02830.1-protein ID=NO13G02830.1-protein|Name=NO13G02830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=406bp
MVKTAAVGLLALAGLTSAFVPTNTNLRMSNKWVTKAKDASFTRNLMMKLG
AGEKVILIGVAADSGCGKSTFMRRLTNIFGGSNVGPLGGGFDNGGWETNT
LVSDTTTVICLDDYHANDRGGRKITGRTALEAAEQNFDLMYEQLKALKEG
KTVAKPIYNHVNGTLDKPEDVVPTPIVIVEGLHPWYDARVKDLLDYTIYL
DISDEIKRAWKIQRDMAERGWTLDQVEAEIEKRKPDFNKFVGPQKEVADA
VIQVLPTELTNDPEGKILRVRLIQKDDGKYEPVYLFDQGSTVSWVPCGKQ
LTCSYPGIKFGSGPDQWFNNAVNIVEMDGQFDNLEELSYVEKHLGNTASK
YAGEITAQMLKNKGAPGSLNGSGLFQTIVSLKIREVYEKLSGKKVDASVK
APVAA*
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Synonyms
Publications