NO13G02650, NO13G02650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02650 vs. NCBI_GenBank
Match: EWM21908.1 (30s ribosomal protein s15 [Nannochloropsis gaditana]) HSP 1 Score: 440.7 bits (1132), Expect = 4.600e-120 Identity = 224/283 (79.15%), Postives = 251/283 (88.69%), Query Frame = 0 Query: 55 MLLQRGVFLSCLLASAVAFAPSMRARAATAAQQRAVSARVYAAGPDVPGG--LVPEDDEEITETFTEIDGVVFEGDFEDDSVKPSLTSLLEDVGDDGGDGFKLDSDDSFFSIPDYVPSELPDLAALGSGLESKRDMMNEFSEGGEFDPNDEKMYRLLGLDALDEKKARVNPEDFTLPGGFLLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFRAPEAARSKFEKYRFY 336 MLLQ+GV +SCLL AVA+ P MR +TA ++V R+YA+GP+ PGG LVPEDDEE+TE FTEIDGVVFEGDFEDDSVKPSLTSLLEDV DDG + FKLDSDDSFFSIPDYVPSELPDLAALGSGLESKRDMMNEF EGGEFDPNDEKMYRLLGLDALDEKK R +PEDFTLPGG+LLEQA+LE+ +KYQ HDKDVGSSAVQ+AQ T T++YLTKHVQ NPRDYSARRGL++AVN+RRKLLNY+SK+NKP A+KLA+ELGIRFR P+ ARSKFE YRFY Sbjct: 1 MLLQKGVLVSCLLTCAVAYVPPMRGPRSTAV-SKSVKLRLYASGPEAPGGSQLVPEDDEEMTEGFTEIDGVVFEGDFEDDSVKPSLTSLLEDVADDGSEAFKLDSDDSFFSIPDYVPSELPDLAALGSGLESKRDMMNEFVEGGEFDPNDEKMYRLLGLDALDEKKTRKSPEDFTLPGGYLLEQARLEVAQKYQKHDKDVGSSAVQVAQFTQTISYLTKHVQVNPRDYSARRGLIRAVNIRRKLLNYISKRNKPFALKLAAELGIRFRPPDGARSKFEMYRFY 282
BLAST of NO13G02650 vs. NCBI_GenBank
Match: EWM21909.1 (30s ribosomal protein s15 [Nannochloropsis gaditana]) HSP 1 Score: 438.7 bits (1127), Expect = 1.700e-119 Identity = 223/283 (78.80%), Postives = 250/283 (88.34%), Query Frame = 0 Query: 55 MLLQRGVFLSCLLASAVAFAPSMRARAATAAQQRAVSARVYAAGPDVPGG--LVPEDDEEITETFTEIDGVVFEGDFEDDSVKPSLTSLLEDVGDDGGDGFKLDSDDSFFSIPDYVPSELPDLAALGSGLESKRDMMNEFSEGGEFDPNDEKMYRLLGLDALDEKKARVNPEDFTLPGGFLLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFRAPEAARSKFEKYRFY 336 MLLQ+GV +SCLL AVA+ P MR +T ++V R+YA+GP+ PGG LVPEDDEE+TE FTEIDGVVFEGDFEDDSVKPSLTSLLEDV DDG + FKLDSDDSFFSIPDYVPSELPDLAALGSGLESKRDMMNEF EGGEFDPNDEKMYRLLGLDALDEKK R +PEDFTLPGG+LLEQA+LE+ +KYQ HDKDVGSSAVQ+AQ T T++YLTKHVQ NPRDYSARRGL++AVN+RRKLLNY+SK+NKP A+KLA+ELGIRFR P+ ARSKFE YRFY Sbjct: 1 MLLQKGVLVSCLLTCAVAYVPPMRGPRSTVI-SKSVKLRLYASGPEAPGGSQLVPEDDEEMTEGFTEIDGVVFEGDFEDDSVKPSLTSLLEDVADDGSEAFKLDSDDSFFSIPDYVPSELPDLAALGSGLESKRDMMNEFVEGGEFDPNDEKMYRLLGLDALDEKKTRKSPEDFTLPGGYLLEQARLEVAQKYQKHDKDVGSSAVQVAQFTQTISYLTKHVQVNPRDYSARRGLIRAVNIRRKLLNYISKRNKPFALKLAAELGIRFRPPDGARSKFEMYRFY 282
BLAST of NO13G02650 vs. NCBI_GenBank
Match: XP_009033209.1 (hypothetical protein AURANDRAFT_52388 [Aureococcus anophagefferens] >EGB12123.1 hypothetical protein AURANDRAFT_52388 [Aureococcus anophagefferens]) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16 Identity = 60/174 (34.48%), Postives = 90/174 (51.72%), Query Frame = 0 Query: 163 SIPDYVPSELPDLAALGSGLESKRDMMNEFSEGGEFDPNDEKMYRLLGLDALDEKKARVNPEDFTLPGGFLLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFRAPEAARSKFEKYRFYT 337 S+ + S L D LG+ E + G D + + L G D D P + + + + E + K+ HD D GSS +QIA T + ++T+HV NP+D+++RRGLL V+ RR+LLNY ++ A+KLA++LG+RFR A + EKYR YT Sbjct: 32 SVTEAGTSVLEDTEGLGAEFEDAIVDDEAWDVEGSGDEDLLAGFDLDGADVGDIDSYGATPRE-------ICDGERAEYKAKFPRHDNDCGSSEIQIALFTARIKHITQHVVDNPKDHASRRGLLTLVSKRRRLLNYYHSRSPEKAVKLAADLGVRFRFKSALPDRAEKYRQYT 198
BLAST of NO13G02650 vs. NCBI_GenBank
Match: GAX25495.1 (small subunit ribosomal protein S15 [Fistulifera solaris]) HSP 1 Score: 89.0 bits (219), Expect = 3.400e-14 Identity = 52/141 (36.88%), Postives = 81/141 (57.45%), Query Frame = 0 Query: 197 EFDPNDEKMYR-----LLGLDALDEKKARVNPEDFTLPGGFLLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFRAPEAARSKFEKY 333 EFD DE+ + L G++ D + P + + E+ Q ++ K+++HDKD GS Q+A +T ++YLT H+Q +P+D+S RRGL+ VN RR+LLNY+S ++ L + LGIR +AP S+ E Y Sbjct: 43 EFDDQDEEQEKDDYIELEGMEDGDVELINTEPPVWAVSA----EKVQ-ALREKHRLHDKDTGSPEYQVAGMTERISYLTNHLQMHPKDFSTRRGLVALVNKRRRLLNYLSTEDVDRYKALIASLGIRHKAPGTVPSREETY 178
BLAST of NO13G02650 vs. NCBI_GenBank
Match: CBN80277.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.8 bits (216), Expect = 7.600e-14 Identity = 49/131 (37.40%), Postives = 72/131 (54.96%), Query Frame = 0 Query: 208 LLGLDALDEKKA--RVNPEDFTLPGGFLLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFRAPEAARSKFEKYRFYT 337 L LD LD + +D +L + A Q K++ +D+D GS + +A LT + YLTKH+Q +P DY +RRGL+ VN RR+ LNY KK +++ + LGIRFR R + ++Y YT Sbjct: 69 LADLDELDSVMGVETQDQQDLKPKQAYLNKLAGQAAQLKWRKNDQDTGSPRIVVAILTEKIVYLTKHMQQHPHDYHSRRGLITMVNKRRRQLNYYFKKEPKECLEMCATLGIRFRPKTKVRGREQRYAAYT 199
BLAST of NO13G02650 vs. NCBI_GenBank
Match: GAX20189.1 (small subunit ribosomal protein S15 [Fistulifera solaris]) HSP 1 Score: 86.7 bits (213), Expect = 1.700e-13 Identity = 41/92 (44.57%), Postives = 62/92 (67.39%), Query Frame = 0 Query: 241 MQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFRAPEAARSKFEKY 333 ++ K+++HDKD GS Q+A +T ++YLT H+Q +P+D+S RRGL+ VN RR+LLNY+S ++ L + LGIR +AP S+ E Y Sbjct: 87 LREKHRLHDKDTGSPEYQVAGMTERISYLTSHLQMHPKDFSTRRGLVALVNKRRRLLNYLSTEDVDRYKALIASLGIRHKAPGTVPSREETY 178
BLAST of NO13G02650 vs. NCBI_GenBank
Match: OEU15075.1 (Ribosomal_S15-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 84.0 bits (206), Expect = 1.100e-12 Identity = 43/107 (40.19%), Postives = 68/107 (63.55%), Query Frame = 0 Query: 229 PGGFLLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFRAPEAARSKFEKYRFY 336 P + +Q +++ + + HDKD GS Q+A +T ++YLTKH+Q +P+D+S RRGL+ VN RR+LLNY+ +++ I + + LGIR +AP A K +Y Y Sbjct: 87 PAWYESQQRLEKLRSENRRHDKDTGSPEFQVAGMTERISYLTKHLQQHPKDFSTRRGLVAMVNKRRRLLNYLYTEDQEKYISIIASLGIRHKAP-AMFDKETRYSSY 192
BLAST of NO13G02650 vs. NCBI_GenBank
Match: WP_011431560.1 (MULTISPECIES: 30S ribosomal protein S15 [Synechococcus] >Q2JR73.1 RecName: Full=30S ribosomal protein S15 >ABD00890.1 ribosomal protein S15 [Synechococcus sp. JA-3-3Ab] >PIK86336.1 30S ribosomal protein S15 [Synechococcus sp. 63AY4M2] >PIK89573.1 30S ribosomal protein S15 [Synechococcus sp. 65AY6A5] >PIK91697.1 30S ribosomal protein S15 [Synechococcus sp. 65AY6Li] >PIK95400.1 30S ribosomal protein S15 [Synechococcus sp. 60AY4M2] >PIK97644.1 30S ribosomal protein S15 [Synechococcus sp. 63AY4M1] >PIL01635.1 30S ribosomal protein S15 [Synechococcus sp. 65AY640]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 37/88 (42.05%), Postives = 63/88 (71.59%), Query Frame = 0 Query: 233 LLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIRFR 321 LL+Q + E+ Y++HD D GS+ VQ+A LT+ +N L++H+Q NP+D+++RRGL+ + R++LLNY++K++ +LA L IR + Sbjct: 3 LLQQEKQEIIETYRLHDTDTGSAEVQVALLTSRINQLSQHLQKNPKDFNSRRGLMMMIGRRKRLLNYIAKRSPDRFRELAERLNIRVK 90
BLAST of NO13G02650 vs. NCBI_GenBank
Match: WP_096620895.1 (30S ribosomal protein S15 [Calothrix sp. NIES-3974] >BAZ04541.1 30S ribosomal protein S15 [Calothrix sp. NIES-3974]) HSP 1 Score: 83.2 bits (204), Expect = 1.900e-12 Identity = 39/86 (45.35%), Postives = 61/86 (70.93%), Query Frame = 0 Query: 233 LLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIR 319 L +Q + E+ KYQ+H+ D GS+ VQ+A LT +N L++H++TN +DYS+RRGLL+ + R++LL Y+ K ++P L + LGIR Sbjct: 3 LKQQEKQEIMSKYQVHETDTGSADVQVAMLTERINRLSEHLKTNKKDYSSRRGLLKIIGQRKRLLAYIQKYDQPRYKDLITRLGIR 88
BLAST of NO13G02650 vs. NCBI_GenBank
Match: WP_026101483.1 (30S ribosomal protein S15 [cyanobacterium PCC 7702]) HSP 1 Score: 82.8 bits (203), Expect = 2.400e-12 Identity = 39/86 (45.35%), Postives = 62/86 (72.09%), Query Frame = 0 Query: 233 LLEQAQLEMQRKYQMHDKDVGSSAVQIAQLTNTVNYLTKHVQTNPRDYSARRGLLQAVNLRRKLLNYVSKKNKPGAIKLASELGIR 319 L +Q + E+ +YQ+H+ D GS+ VQIA LT +N L++H+Q N +D+S+RRGLL+ + R++LL+Y+ K+N+ +L S LGIR Sbjct: 3 LTQQRKQEIISQYQVHETDTGSADVQIAMLTERINRLSEHLQVNKKDFSSRRGLLKLIGQRKRLLSYIQKENRERYQELISRLGIR 88 The following BLAST results are available for this feature:
BLAST of NO13G02650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02650 ID=NO13G02650|Name=NO13G02650|organism=Nannochloropsis oceanica|type=gene|length=2148bpback to top protein sequence of NO13G02650.1 >NO13G02650.1-protein ID=NO13G02650.1-protein|Name=NO13G02650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bpback to top Synonyms
Publications
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