NO13G02600, NO13G02600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02600 vs. NCBI_GenBank
Match: EWM21924.1 (uracil phosphoribosyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 431.0 bits (1107), Expect = 2.700e-117 Identity = 225/269 (83.64%), Postives = 237/269 (88.10%), Query Frame = 0 Query: 1 MPSSIAATVIYKRPASPAISVSSCVEASDLPSSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLFTAYGVGEHDDETSVHTVASAKKRKAGEKNGC 270 MPSS KRP SP SC EASDLP SV+CSGHPLL HKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEG+LGPV GQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYH+GMFSNH+S SLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVS LKKWG KKI+VIGVVG+LQGLHKLTQAHPDIRVHVA+IDEA+S DGHILPGIGDASERLF A+ VGE DDETSV + + KK K + NGC Sbjct: 1 MPSSAT-----KRPTSP-FPAKSCQEASDLPPSVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAH-VGEPDDETSVLNLCATKKTKRSD-NGC 261
BLAST of NO13G02600 vs. NCBI_GenBank
Match: XP_009526406.1 (hypothetical protein PHYSODRAFT_544971, partial [Phytophthora sojae] >EGZ17348.1 hypothetical protein PHYSODRAFT_544971, partial [Phytophthora sojae]) HSP 1 Score: 224.9 bits (572), Expect = 2.900e-55 Identity = 107/207 (51.69%), Postives = 154/207 (74.40%), Query Frame = 0 Query: 32 SSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLF 239 S V+C+ HP+L+HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G G +LS +A+VPILR GLGMV+ M ++LPNA V+HIGM+ N K S LP+QYYN+LPKE + AD+ VL+P+IATAGT AT++ LK WG +KI ++ + S QGL ++ +PD+ + +A+ID+ +SEDG+ILPG+GDA +R F Sbjct: 18 SKVWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGEHQGAELSTSVALVPILRAGLGMVEPMLDVLPNATVHHIGMYRN-KQSLLPVQYYNKLPKECN--ADVAIVLEPVIATAGTILATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLSEDGYILPGLGDAGDREF 221
BLAST of NO13G02600 vs. NCBI_GenBank
Match: XP_024572906.1 (uracil phosphoribosyltransferase [Plasmopara halstedii] >CEG36537.1 uracil phosphoribosyltransferase [Plasmopara halstedii]) HSP 1 Score: 224.2 bits (570), Expect = 5.000e-55 Identity = 108/207 (52.17%), Postives = 152/207 (73.43%), Query Frame = 0 Query: 32 SSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLF 239 S V+C+ HP+L+HK+T LRD +T R FR+L+RE+T YLGY+AT ++ P+ ++ G G +LS +A+VPILR GLGMVD M +ILPNA+V+HIGM+ N K S LP+QYYN+LPKE D D+ +L+P+IATAGT AT++ LK WG KKI V+ + S QGL ++ +P + + +A+ID+ +SEDG+ILPG+GDA +R F Sbjct: 18 SKVWCATHPVLRHKLTKLRDERTDCRAFRYLLREVTFYLGYDATDDLETIPKQIKTPKGDHQGAELSTNVALVPILRAGLGMVDPMLDILPNASVHHIGMYRN-KQSLLPVQYYNKLPKECD--VDVAIILEPVIATAGTIVATLAVLKTWGVKKIKVVSAIASKQGLQEVCAKNPGVEIFLAAIDDELSEDGYILPGLGDAGDREF 221
BLAST of NO13G02600 vs. NCBI_GenBank
Match: POM65945.1 (Uracil phosphoribosyltransferase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 223.0 bits (567), Expect = 1.100e-54 Identity = 105/207 (50.72%), Postives = 152/207 (73.43%), Query Frame = 0 Query: 32 SSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLF 239 S V+C+ HP+L+HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G G +LS +A+VPILR GLGMVD M ++LPNA V+HIGM+ N K S LP+QYYN+LPKE + D+ VL+P+IATAGT AT++ LK WG +KI ++ + S QGL ++ +PD+ + + +ID+ ++EDG+ILPG+GDA +R F Sbjct: 231 SKVWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETIPKKIKTPKGDYQGVELSTSVALVPILRAGLGMVDPMLDVLPNATVHHIGMYRN-KQSLLPVQYYNKLPKECN--VDVAIVLEPVIATAGTILATLAVLKTWGVEKIKIVSTIASKQGLQEVCAKNPDVEIFLGAIDDGLTEDGYILPGLGDAGDREF 434
BLAST of NO13G02600 vs. NCBI_GenBank
Match: ETI45526.1 (uracil phosphoribosyltransferase [Phytophthora parasitica P1569] >ETL38879.1 uracil phosphoribosyltransferase [Phytophthora parasitica] >ETL92028.1 uracil phosphoribosyltransferase [Phytophthora parasitica] >ETM45325.1 uracil phosphoribosyltransferase [Phytophthora parasitica] >ETO74140.1 uracil phosphoribosyltransferase [Phytophthora parasitica P1976] >ETP15306.1 uracil phosphoribosyltransferase [Phytophthora parasitica CJ01A1] >ETP43383.1 uracil phosphoribosyltransferase [Phytophthora parasitica P10297]) HSP 1 Score: 220.3 bits (560), Expect = 7.200e-54 Identity = 102/207 (49.28%), Postives = 154/207 (74.40%), Query Frame = 0 Query: 32 SSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLF 239 S V+C+ HP+L+HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G G +LS +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N K S LP+QYYN+LPKE + D+ +L+P+IATAGT AT++ LK WG +KI ++ + S QGL ++ +PD+ + +A+ID+ ++EDG+I+PG+GDA +R F Sbjct: 18 SKVWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRN-KQSLLPVQYYNKLPKECN--VDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREF 221
BLAST of NO13G02600 vs. NCBI_GenBank
Match: ETK85480.1 (uracil phosphoribosyltransferase [Phytophthora parasitica]) HSP 1 Score: 220.3 bits (560), Expect = 7.200e-54 Identity = 102/207 (49.28%), Postives = 154/207 (74.40%), Query Frame = 0 Query: 32 SSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLF 239 S V+C+ HP+L+HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G G +LS +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N K S LP+QYYN+LPKE + D+ +L+P+IATAGT AT++ LK WG +KI ++ + S QGL ++ +PD+ + +A+ID+ ++EDG+I+PG+GDA +R F Sbjct: 18 SKVWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRN-KQSLLPVQYYNKLPKECN--VDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREF 221
BLAST of NO13G02600 vs. NCBI_GenBank
Match: KUF85926.1 (Uracil phosphoribosyltransferase [Phytophthora nicotianae]) HSP 1 Score: 218.8 bits (556), Expect = 2.100e-53 Identity = 101/207 (48.79%), Postives = 153/207 (73.91%), Query Frame = 0 Query: 32 SSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLF 239 S V+C+ HP+L+HK+T LRD +T +R FRHL+RE+T YLGY+AT ++ P+ ++ G G +LS +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N K S LP+QYYN+LPKE + D+ +L+P+IAT GT AT++ LK WG +KI ++ + S QGL ++ +PD+ + +A+ID+ ++EDG+I+PG+GDA +R F Sbjct: 18 SKVWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRN-KQSLLPVQYYNKLPKECN--VDVAIILEPVIATVGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREF 221
BLAST of NO13G02600 vs. NCBI_GenBank
Match: OQS06806.1 (uracil phosphoribosyltransferase [Thraustotheca clavata]) HSP 1 Score: 217.6 bits (553), Expect = 4.600e-53 Identity = 110/212 (51.89%), Postives = 151/212 (71.23%), Query Frame = 0 Query: 29 DLPSS--VYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLF 239 +LPSS + + HP+L HK+T LRD KT FRHL+RE+T YLGYEAT ++ + P+ + LGP G +L+ +A+VPILR GLGMV+ M ++LPNA V+HIGM+ N K+S LP+QYYN+LP KD D VL+P+IATAGT ATV+ L WG K+ +I + S GL +L + HP++ V VA+IDE +SE+G+I+PG+GDA +R F Sbjct: 10 NLPSSSKIIVATHPVLAHKLTKLRDSKTDANLFRHLLREITFYLGYEATHDLAVIPKNITTPLGPHQGAELATSVALVPILRAGLGMVEPMLDLLPNAVVHHIGMYRN-KNSLLPVQYYNKLP--KDCNIDTAIVLEPMIATAGTIIATVAILHVWGVSKVKIISTIASKSGLKELFEQHPNVEVIVAAIDENLSEEGYIVPGLGDAGDRQF 218
BLAST of NO13G02600 vs. NCBI_GenBank
Match: OQR83614.1 (uracil phosphoribosyltransferase [Achlya hypogyna]) HSP 1 Score: 216.9 bits (551), Expect = 7.900e-53 Identity = 110/226 (48.67%), Postives = 154/226 (68.14%), Query Frame = 0 Query: 21 VSSCVEASDL----PSSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLFTAYG 243 + +C +A+ L S V + HP+L HK+T LRD KT FRHL+RE+T YLGYEAT ++ + P+ + LGP G +L+ +A+VPILR GLGMV+ M ++LPNA V+HIGM+ N K+S LP+QYYN+LP KD D+ +L+P+IATAGT ATV+ L WG ++ +I + S GL +L HP + V VA+IDE +SE+G+I+PG+GDA +R F G Sbjct: 1 MKNCADAASLGLPAHSKVVVATHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATGDLAVVPKSITTPLGPHQGAELATSVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRN-KNSLLPVQYYNKLP--KDCNVDVAIILEPVIATAGTIIATVAILHVWGVSQVKIISTIASKAGLKELFAKHPSVEVIVAAIDENLSEEGYIVPGLGDAGDRQFDTVG 223
BLAST of NO13G02600 vs. NCBI_GenBank
Match: XP_009824402.1 (uracil phosphoribosyltransferase [Aphanomyces astaci] >ETV85930.1 uracil phosphoribosyltransferase [Aphanomyces astaci]) HSP 1 Score: 215.3 bits (547), Expect = 2.300e-52 Identity = 119/247 (48.18%), Postives = 160/247 (64.78%), Query Frame = 0 Query: 25 VEASDLP--SSVYCSGHPLLQHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGTLGPVAGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHIGMFSNHKSSSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSTLKKWGAKKIVVIGVVGSLQGLHKLTQAHPDIRVHVASIDEAISEDGHILPGIGDASERLFTAYGVGEHDDETSVHTVA---SAKKRKAGEK 267 V++ LP S V S HP+L HK+T LRD KT FRHL+RE+T YLGYEAT++++ P+ ++ LGP G +L+ +A+VPILR GLGMV+ M ++LPNA V+HIGM+ N +S LP+QYYN+LPKE D VL+PLI TAGT ATV+ LK WG +I +I + S GL L HPD+ V VA+ID+ +SE G I+PG+GDA +R F +T VH ++ KRK E+ Sbjct: 9 VKSLGLPENSKVILSTHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATSDLSTVPKQIKTPLGPHQGSELATTVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRN-SNSLLPVQYYNKLPKECH--IDCAIVLEPLINTAGTIIATVAILKVWGVSQIKIISTIASKDGLKDLFAKHPDVEVIVAAIDDTLSESGVIVPGLGDAGDRQF----------DTDVHHISENGGNHKRKHSEE 242 The following BLAST results are available for this feature:
BLAST of NO13G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02600 ID=NO13G02600|Name=NO13G02600|organism=Nannochloropsis oceanica|type=gene|length=3323bpback to top protein sequence of NO13G02600.1 >NO13G02600.1-protein ID=NO13G02600.1-protein|Name=NO13G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=270bpback to top Synonyms
Publications
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