NO13G02470, NO13G02470 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_004990606.1 (oxidoreductase [Salpingoeca rosetta] >EGD77262.1 oxidoreductase [Salpingoeca rosetta]) HSP 1 Score: 198.4 bits (503), Expect = 3.800e-47 Identity = 124/309 (40.13%), Postives = 171/309 (55.34%), Query Frame = 0 Query: 46 VVGALAVWMGLLL---NPSYPVPPKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVAN--STTAAQTYPWYYTKKYFDIFNFGINHAGDVSRVARQVLA-ALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349 ++G LAV + LL +PV G +L+TGTSTGIGR LAK GY V+A VR+Q + +++ K + + P+++DVT + I + V IK+ G H K GLVNNAGI P+E HD+D +R+MFE N+ G + +TQ LP+IR +KGRI+ SLAG I P YSATK G+E + DALR+E+ P+ SVS+VEP +V T I SK S TY W++ F+ D V + + ALT P+TRY N +P +A L+PDRL D +L Sbjct: 9 LMGILAVLLYLLFVFPVKYFPVHDSGAILITGTSTGIGRHAAVELAKKGYTVYATVRKQ---ADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTIKK--GGH---KLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFAD--FEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIVL 307
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_001747089.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88013.1 predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 190.7 bits (483), Expect = 7.900e-45 Identity = 114/320 (35.62%), Postives = 166/320 (51.88%), Query Frame = 0 Query: 41 IGIATVVGAL-AVWMGLLLNPSYPVPPKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQTYPWYYTKKYFDIFNF-----------GINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349 + + + AL AVW L P+Y V +G+VLVTG S+GIGR LAK GY V+ VR++ A N I +HP+++DVT E I N V I + D LVNNAGI P+E +DM+ VRN FE N+ G + TQ LPL+R +KGRII S+AG + +YS TK +E + D+LR+EL P SVSLVEP +V T E+ + ++ AQ+ + +K+ ++++ HA ++ A+ +P+TRY N +P W+ L+PDR +D I+ Sbjct: 7 VTVVVLAAALYAVWE--LPRPTYHVHEQGVVLVTGASSGIGRHAAIELAKLGYEVYGTVRKERDA---NDIRGLGIKTLHPIIMDVTNSEQIKNAVETISKL-----DQPLIALVNNAGISSRAPLEAYDMNRVRNTFEVNIFGLVETTQAFLPLLRANKGRIINIGSVAGLVGMEGSAVYSGTKFALEGISDSLRRELFPLGVSVSLVEPAYVKT----------EIVHKSSGAQSAEHWASKEMLEVYDHFFSVADEKRQRAFEHADTPECTTNAIVDAIRSPQPRTRYVVANTHKIPAWITTGMTWLLPDRAVDAIM 306
BLAST of NO13G02470 vs. NCBI_GenBank
Match: EWM25314.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana]) HSP 1 Score: 175.3 bits (443), Expect = 3.400e-40 Identity = 108/324 (33.33%), Postives = 173/324 (53.40%), Query Frame = 0 Query: 35 LMRNTFIGI--ATVVGALAVWMGL-LLNPSYPVPPK-GIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDN----VVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDS--EEVANSTTAAQTYPWYYTKKYFDIFNFGINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349 L+R +G+ A V+ ++ + + + +PVPPK G +++TG STGIG LA+ GY V+ VR+ + I + P+++DV + I+N ++ E+ + +++ GLVNNAG+ P+E H + D+R+MF+ +++GPL LTQ+LLP IR +KGRI+ SS+ + P Y A+K VE + D LR+EL+ ++CSVS+V+P +V T I K+ S +V S TY +++ + ++ A S + ALT P TRY NV +P + L PDRL D I+ Sbjct: 11 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRK---PADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSK-----NNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIM 326
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_068207734.1 (KR domain-containing protein [Rathayibacter tanaceti] >KZX22558.1 Serine 3-dehydrogenase [Rathayibacter tanaceti]) HSP 1 Score: 170.6 bits (431), Expect = 8.500e-39 Identity = 106/282 (37.59%), Postives = 158/282 (56.03%), Query Frame = 0 Query: 69 IVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSK-ILDSEEVANSTTAAQTYPWYYTKKYFDIFNFGINHAG-DVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349 ++LVTG STG+G V LA GYHV AGVRR+ ++ I+ R I PVLLD+T E I V I E D +VNNAGI + PVE M + R F+ N G + +TQ +LP + R +GR++ SS+ GR+ QP G YS +K +EAV D+LR+EL P V++VEPG V T ++ + + +++++ +A Q + K + + G +G D S+ AR + AA T+ RPKTRY + I+ + +PDR++D++L Sbjct: 10 LILVTGASTGMGAATVRELAARGYHVLAGVRRE---SDGRAIAAPR---IQPVLLDITRPEQIQEVAALI-----ETDGRPLRAVVNNAGIAVNAPVEVLPMQEWRRQFDVNFFGHIEVTQAVLPALLRSRGRVVMISSIGGRLAQPTYGAYSGSKFALEAVADSLRRELAPTGVQVAIVEPGAVRTEMVGRGGVTLKKLSSEMSAEQERRYGGLMKAILLQSEGFLRSGVDASQAARTIAAAATERRPKTRYTIGR----DAAILIRLARFLPDRVLDRLL 276
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_005855521.1 (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >EKU20840.1 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 168.7 bits (426), Expect = 3.200e-38 Identity = 103/308 (33.44%), Postives = 166/308 (53.90%), Query Frame = 0 Query: 35 LMRNTFIGI--ATVVGALAVWMGL-LLNPSYPVPPK-GIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDN----VVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDS--EEVANSTTAAQTYPWYYTKKYFDIFNFGINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPT-WL 332 L+R +G+ A V+ ++ + + + +PVPPK G +++TG STGIG LA+ GY V+ VR+ + I + P+++DV + I+N ++ E+ + +++ GLVNNAG+ P+E H + D+R+MF+ +++GPL LTQ+LLP IR +KGRI+ SS+ + P Y A+K VE + D LR+EL+ ++CSVS+V+P +V T I K+ S +V S TY +++ + ++ A S + ALT P TRY NV +P WL Sbjct: 19 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRK---PADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSK-----NNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWL 318
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_094919760.1 (KR domain-containing protein [Pseudonocardia sp. MH-G8] >OZM83083.1 short-chain dehydrogenase/reductase [Pseudonocardia sp. MH-G8]) HSP 1 Score: 168.3 bits (425), Expect = 4.200e-38 Identity = 110/284 (38.73%), Postives = 159/284 (55.99%), Query Frame = 0 Query: 68 GIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQ-TYPWYYTKKYFDIFNFGINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPT-WLAIQAKQLIPDRLMDKILT 350 G V+VTG S+GIG+ LA+ GY V+AG RR E+ + R + PV +DVT ++ +D + +R + E + GLVNNAG P+EH +DD+R + E N++G + +TQ LLPL+RRD GR+I SS+ GRI P G Y+A+K +EAV DALR+E+L V VEPG V TPI SK+ + +VA+ A+ Y +F +H +A + ALT RP+ RY L+ P+ + A +L+P R+ D+ILT Sbjct: 8 GAVVVTGASSGIGQATALRLARRGYQVYAGFRRPEAGRQLT----GRSPNLVPVHVDVTEQDTVDAL---RERLTHELGVVPLRGLVNNAGTTTAAPIEHVRLDDLRRVLEVNVVGQVAMTQALLPLLRRDHGRVINISSMGGRIAGPIMGPYAASKFALEAVTDALRREVLNQGIEVVAVEPGAVATPIWSKVDATLDVASMAPEARLRYGDLIVGMQQAVFKASASHGVPPEEIAEVIEDALTRRRPRIRY-----LVGPSAHTRVFAARLLPSRVFDRILT 279
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_056868449.1 (SDR family NAD(P)-dependent oxidoreductase [Rathayibacter sp. Leaf296] >KQQ08751.1 dehydrogenase [Rathayibacter sp. Leaf296]) HSP 1 Score: 167.5 bits (423), Expect = 7.200e-38 Identity = 102/285 (35.79%), Postives = 154/285 (54.04%), Query Frame = 0 Query: 66 PKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSK-ILDSEEVANSTTAAQTYPWYYTKKYFDIFNFGINHAG-DVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349 P +VLVTG STG+G V LA GYHV AGVRR+ + +I PVLLD+T + I + + E D +VNNAGI + PVE M++ R F+ N G + +TQ +LP + + +GR++ SS+ GR+ QP G YS +K +EAV D+LR+EL P V++VEPG V T ++ + + ++++ T Q + K + + G +G D S+ AR + A T RPKTRY + I+ +L+PDR++D++L Sbjct: 7 PTELVLVTGASTGMGAATVRELAARGYHVLAGVRRESDGRSLES------PRIRPVLLDITRPDQIREIAALV-----EADGRPLRAVVNNAGIAVNAPVEVLPMEEWRRQFDVNFFGHIEVTQAVLPALLKSRGRVVMISSIGGRLAQPTYGAYSGSKFALEAVADSLRRELAPTGVQVAIVEPGAVRTEMVGRGGVTLKKLSADMTPEQERRYGSLMKAILLQSEGFLRSGVDASQAARTIATAATARRPKTRYTIGR----DAAILIRLARLLPDRVLDRLL 276
BLAST of NO13G02470 vs. NCBI_GenBank
Match: OGW19404.1 (short-chain dehydrogenase/reductase [Nitrospirae bacterium GWC1_57_7] >OGW29141.1 short-chain dehydrogenase/reductase [Nitrospirae bacterium GWC2_57_13] >OGW45114.1 short-chain dehydrogenase/reductase [Nitrospirae bacterium GWD2_57_8]) HSP 1 Score: 166.8 bits (421), Expect = 1.200e-37 Identity = 112/291 (38.49%), Postives = 151/291 (51.89%), Query Frame = 0 Query: 67 KGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQTYPWYYTKKYFDIFNF-------GINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQA--KQLIPDRLMDKIL 349 +G V++TG STGIGR L + G+ VFAGVR S R I PV+LDVT I + + G D GLVNNAGI P E +D +R FE N G + +T+ LPL+R+ GRI+ S++GR+ P G Y A+K +EA+ DALR ELLP+ VSL+EPG + TPI K V+++ A YP + Y D A SRV + V+ ALT RPKTRY +V IQA K+++PDRL+D+++ Sbjct: 9 RGAVVITGASTGIGRACALELDRLGFRVFAGVRNDTDGIGLKDASSGR---ILPVMLDVTDYGSISAAAGTVAQAVG---DGGIKGLVNNAGIVVGGPFEFLPLDAIRRQFEVNFFGQIAVTRAFLPLLRKGHGRIVNMGSISGRVVTPFVGPYGASKHALEALSDALRVELLPWGIEVSLIEPGSIATPIWKK-----SVSSAAATAAAYPDKAQELYGDAMRAVQAAALRKGEEAIPASRVVQAVVHALTAARPKTRY------LVGRGAHIQALLKKILPDRLLDRLI 282
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_083275599.1 (SDR family NAD(P)-dependent oxidoreductase [Pseudonocardia sp. HH130630-07]) HSP 1 Score: 165.2 bits (417), Expect = 3.600e-37 Identity = 111/292 (38.01%), Postives = 156/292 (53.42%), Query Frame = 0 Query: 63 PVPPKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTI-SKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDS--EEVANSTTAAQTYPWYYTKKYFDIFNFGINHAGDVSR-----VARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDK 347 PV +G VLVTG S+G+GR LA+SG+ V AGVRR T+ I + R +HP+ DVT ++ + E +R G GLVNNAGI P+E D++R E N++G + +TQ LP +RR +GRI+ +S G + P G Y+ + EA+ DALR+EL P VS+V+PG ++TPI K+ D+ E +A S A TY +T+ F G SR VAR VL ALT RP+TRY A++ +L+PD L+D+ Sbjct: 23 PVSARGTVLVTGASSGLGRHCALTLARSGFTVLAGVRR---GTDGERIAADARPGAVHPLRFDVTDEDAVRAAAAEAERLGG------IRGLVNNAGICVSAPLECLPPDELRRQLEINVVGQVSVTQAFLPQLRRHRGRIVNVTSGLGSLAVPYMGAYAMAQFAKEAMSDALRRELAPLGVRVSVVQPGAILTPIWDKVSDTADEVLARSPDVADTYRDVFTR-----FLRGNAEGARTSRTTPDDVARAVLRALTAARPRTRYPVGR----DARSAVRLARLLPDGLLDR 296
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_005855938.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20411.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 164.1 bits (414), Expect = 7.900e-37 Identity = 115/309 (37.22%), Postives = 167/309 (54.05%), Query Frame = 0 Query: 50 LAVWMGL---LLNPSYPVPPKG-IVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDM----KFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQTYPWYYTKKYFDIFNFGIN----HAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQ-AKQLIPDRLMD 346 +A+++GL + PS+PVPP G V++TG+STGIGR LA +G+ VFAGVRR + T+ + ++ P+LLDVT +H V+ + +DM K AGLVNNAGIG P+E + +R + E N++G L +TQ LP +RRD+GRII S AG G YS++K +EA+ DALR EL P+ SVSL+EPG + + I K + + T +Q Y Y ++ FD + ++ AG +L ALT P++RY + WL +PD L+D Sbjct: 24 VALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRR---VRDVETLVEAYPGRVFPLLLDVT--DHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQ-YVLY--QQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 324 The following BLAST results are available for this feature:
BLAST of NO13G02470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02470 ID=NO13G02470|Name=NO13G02470|organism=Nannochloropsis oceanica|type=gene|length=1548bpback to top protein sequence of NO13G02470.1 >NO13G02470.1-protein ID=NO13G02470.1-protein|Name=NO13G02470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=351bpback to top Synonyms
Publications
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