NO13G02470, NO13G02470 (gene) Nannochloropsis oceanica

Overview
NameNO13G02470
Unique NameNO13G02470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1548
Alignment locationchr13:681013..682560 -

Link to JBrowse

Properties
Property NameValue
DescriptionD-beta-hydroxybutyrate dehydrogenase, mitochondrial
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:681013..682560 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_004990606.1 (oxidoreductase [Salpingoeca rosetta] >EGD77262.1 oxidoreductase [Salpingoeca rosetta])

HSP 1 Score: 198.4 bits (503), Expect = 3.800e-47
Identity = 124/309 (40.13%), Postives = 171/309 (55.34%), Query Frame = 0
Query:   46 VVGALAVWMGLLL---NPSYPVPPKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVAN--STTAAQTYPWYYTKKYFDIFNFGINHAGDVSRVARQVLA-ALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349
            ++G LAV + LL       +PV   G +L+TGTSTGIGR     LAK GY V+A VR+Q    + +++ K   + + P+++DVT  + I + V  IK+  G H   K  GLVNNAGI    P+E HD+D +R+MFE N+ G + +TQ  LP+IR +KGRI+   SLAG I  P    YSATK G+E + DALR+E+ P+  SVS+VEP +V T I SK           S     TY W++    F+          D   V  + +  ALT   P+TRY   N   +P  +A     L+PDRL D +L
Sbjct:    9 LMGILAVLLYLLFVFPVKYFPVHDSGAILITGTSTGIGRHAAVELAKKGYTVYATVRKQ---ADVDSLKKEGVNTLIPIVMDVTKPDQIASAVDTIKK--GGH---KLIGLVNNAGISARVPLEAHDLDRIRSMFEVNVFGVVSVTQAFLPMIRENKGRIVNVGSLAGFIAMPGSASYSATKFGLEGLNDALRREMAPFGVSVSIVEPAYVSTAIASKSTGEAAATRWVSREMQDTYAWFFAD--FEEKRLKGEALADGPEVTTKAITHALTSRTPETRYIVANTYGIPAKIAALINWLLPDRLGDIVL 307          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_001747089.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ88013.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 190.7 bits (483), Expect = 7.900e-45
Identity = 114/320 (35.62%), Postives = 166/320 (51.88%), Query Frame = 0
Query:   41 IGIATVVGAL-AVWMGLLLNPSYPVPPKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQTYPWYYTKKYFDIFNF-----------GINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349
            + +  +  AL AVW   L  P+Y V  +G+VLVTG S+GIGR     LAK GY V+  VR++  A   N I       +HP+++DVT  E I N V  I +      D     LVNNAGI    P+E +DM+ VRN FE N+ G +  TQ  LPL+R +KGRII   S+AG +      +YS TK  +E + D+LR+EL P   SVSLVEP +V T          E+ + ++ AQ+   + +K+  ++++               HA         ++ A+   +P+TRY   N   +P W+      L+PDR +D I+
Sbjct:    7 VTVVVLAAALYAVWE--LPRPTYHVHEQGVVLVTGASSGIGRHAAIELAKLGYEVYGTVRKERDA---NDIRGLGIKTLHPIIMDVTNSEQIKNAVETISKL-----DQPLIALVNNAGISSRAPLEAYDMNRVRNTFEVNIFGLVETTQAFLPLLRANKGRIINIGSVAGLVGMEGSAVYSGTKFALEGISDSLRRELFPLGVSVSLVEPAYVKT----------EIVHKSSGAQSAEHWASKEMLEVYDHFFSVADEKRQRAFEHADTPECTTNAIVDAIRSPQPRTRYVVANTHKIPAWITTGMTWLLPDRAVDAIM 306          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: EWM25314.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana])

HSP 1 Score: 175.3 bits (443), Expect = 3.400e-40
Identity = 108/324 (33.33%), Postives = 173/324 (53.40%), Query Frame = 0
Query:   35 LMRNTFIGI--ATVVGALAVWMGL-LLNPSYPVPPK-GIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDN----VVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDS--EEVANSTTAAQTYPWYYTKKYFDIFNFGINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349
            L+R   +G+  A V+  ++  + + +    +PVPPK G +++TG STGIG      LA+ GY V+  VR+     +   I       + P+++DV   + I+N    ++ E+ +     +++   GLVNNAG+    P+E H + D+R+MF+ +++GPL LTQ+LLP IR +KGRI+  SS+   +  P    Y A+K  VE + D LR+EL+ ++CSVS+V+P +V T I  K+  S   +V  S     TY +++  +        ++ A   S     +  ALT   P TRY   NV  +P +       L PDRL D I+
Sbjct:   11 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRK---PADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSK-----NNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWLGWLVWLCPDRLADFIM 326          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_068207734.1 (KR domain-containing protein [Rathayibacter tanaceti] >KZX22558.1 Serine 3-dehydrogenase [Rathayibacter tanaceti])

HSP 1 Score: 170.6 bits (431), Expect = 8.500e-39
Identity = 106/282 (37.59%), Postives = 158/282 (56.03%), Query Frame = 0
Query:   69 IVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSK-ILDSEEVANSTTAAQTYPWYYTKKYFDIFNFGINHAG-DVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349
            ++LVTG STG+G   V  LA  GYHV AGVRR+   ++   I+  R   I PVLLD+T  E I  V   I     E D      +VNNAGI  + PVE   M + R  F+ N  G + +TQ +LP + R +GR++  SS+ GR+ QP  G YS +K  +EAV D+LR+EL P    V++VEPG V T ++ +  +  +++++  +A Q   +    K   + + G   +G D S+ AR + AA T+ RPKTRY           + I+  + +PDR++D++L
Sbjct:   10 LILVTGASTGMGAATVRELAARGYHVLAGVRRE---SDGRAIAAPR---IQPVLLDITRPEQIQEVAALI-----ETDGRPLRAVVNNAGIAVNAPVEVLPMQEWRRQFDVNFFGHIEVTQAVLPALLRSRGRVVMISSIGGRLAQPTYGAYSGSKFALEAVADSLRRELAPTGVQVAIVEPGAVRTEMVGRGGVTLKKLSSEMSAEQERRYGGLMKAILLQSEGFLRSGVDASQAARTIAAAATERRPKTRYTIGR----DAAILIRLARFLPDRVLDRLL 276          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_005855521.1 (1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526] >EKU20840.1 1-acylglycerone phosphate reductase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 168.7 bits (426), Expect = 3.200e-38
Identity = 103/308 (33.44%), Postives = 166/308 (53.90%), Query Frame = 0
Query:   35 LMRNTFIGI--ATVVGALAVWMGL-LLNPSYPVPPK-GIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDN----VVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDS--EEVANSTTAAQTYPWYYTKKYFDIFNFGINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPT-WL 332
            L+R   +G+  A V+  ++  + + +    +PVPPK G +++TG STGIG      LA+ GY V+  VR+     +   I       + P+++DV   + I+N    ++ E+ +     +++   GLVNNAG+    P+E H + D+R+MF+ +++GPL LTQ+LLP IR +KGRI+  SS+   +  P    Y A+K  VE + D LR+EL+ ++CSVS+V+P +V T I  K+  S   +V  S     TY +++  +        ++ A   S     +  ALT   P TRY   NV  +P  WL
Sbjct:   19 LLRGVALGLLGAFVLAIMSYHLTVFIFRKRFPVPPKGGAIVITGASTGIGNHAAQHLARQGYIVYCTVRK---PADVEAIQALGLPNLRPIIMDVAQAKSIENGAETILAELSK-----NNIPLIGLVNNAGVAQKFPLEFHPLTDLRSMFDIHVIGPLELTQRLLPAIRANKGRIVNLSSITALVLLPTGAAYGASKLAVEGISDGLRRELVDFDCSVSIVQPAYVNTAIFKKVTQSIDTKVEVSPEIMTTYGYFFRTEKRIKDRAAVDKASPPSVTTDAITHALTSPYPHTRYIVANVSGIPAFWL 318          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_094919760.1 (KR domain-containing protein [Pseudonocardia sp. MH-G8] >OZM83083.1 short-chain dehydrogenase/reductase [Pseudonocardia sp. MH-G8])

HSP 1 Score: 168.3 bits (425), Expect = 4.200e-38
Identity = 110/284 (38.73%), Postives = 159/284 (55.99%), Query Frame = 0
Query:   68 GIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQ-TYPWYYTKKYFDIFNFGINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPT-WLAIQAKQLIPDRLMDKILT 350
            G V+VTG S+GIG+     LA+ GY V+AG RR E+  +       R   + PV +DVT ++ +D +    +R + E   +   GLVNNAG     P+EH  +DD+R + E N++G + +TQ LLPL+RRD GR+I  SS+ GRI  P  G Y+A+K  +EAV DALR+E+L     V  VEPG V TPI SK+  + +VA+    A+  Y          +F    +H      +A  +  ALT  RP+ RY     L+ P+    + A +L+P R+ D+ILT
Sbjct:    8 GAVVVTGASSGIGQATALRLARRGYQVYAGFRRPEAGRQLT----GRSPNLVPVHVDVTEQDTVDAL---RERLTHELGVVPLRGLVNNAGTTTAAPIEHVRLDDLRRVLEVNVVGQVAMTQALLPLLRRDHGRVINISSMGGRIAGPIMGPYAASKFALEAVTDALRREVLNQGIEVVAVEPGAVATPIWSKVDATLDVASMAPEARLRYGDLIVGMQQAVFKASASHGVPPEEIAEVIEDALTRRRPRIRY-----LVGPSAHTRVFAARLLPSRVFDRILT 279          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_056868449.1 (SDR family NAD(P)-dependent oxidoreductase [Rathayibacter sp. Leaf296] >KQQ08751.1 dehydrogenase [Rathayibacter sp. Leaf296])

HSP 1 Score: 167.5 bits (423), Expect = 7.200e-38
Identity = 102/285 (35.79%), Postives = 154/285 (54.04%), Query Frame = 0
Query:   66 PKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSK-ILDSEEVANSTTAAQTYPWYYTKKYFDIFNFGINHAG-DVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKIL 349
            P  +VLVTG STG+G   V  LA  GYHV AGVRR+       +       +I PVLLD+T  + I  +   +     E D      +VNNAGI  + PVE   M++ R  F+ N  G + +TQ +LP + + +GR++  SS+ GR+ QP  G YS +K  +EAV D+LR+EL P    V++VEPG V T ++ +  +  ++++   T  Q   +    K   + + G   +G D S+ AR +  A T  RPKTRY           + I+  +L+PDR++D++L
Sbjct:    7 PTELVLVTGASTGMGAATVRELAARGYHVLAGVRRESDGRSLES------PRIRPVLLDITRPDQIREIAALV-----EADGRPLRAVVNNAGIAVNAPVEVLPMEEWRRQFDVNFFGHIEVTQAVLPALLKSRGRVVMISSIGGRLAQPTYGAYSGSKFALEAVADSLRRELAPTGVQVAIVEPGAVRTEMVGRGGVTLKKLSADMTPEQERRYGSLMKAILLQSEGFLRSGVDASQAARTIATAATARRPKTRYTIGR----DAAILIRLARLLPDRVLDRLL 276          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: OGW19404.1 (short-chain dehydrogenase/reductase [Nitrospirae bacterium GWC1_57_7] >OGW29141.1 short-chain dehydrogenase/reductase [Nitrospirae bacterium GWC2_57_13] >OGW45114.1 short-chain dehydrogenase/reductase [Nitrospirae bacterium GWD2_57_8])

HSP 1 Score: 166.8 bits (421), Expect = 1.200e-37
Identity = 112/291 (38.49%), Postives = 151/291 (51.89%), Query Frame = 0
Query:   67 KGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQTYPWYYTKKYFDIFNF-------GINHAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQA--KQLIPDRLMDKIL 349
            +G V++TG STGIGR     L + G+ VFAGVR           S  R   I PV+LDVT    I      + +  G   D    GLVNNAGI    P E   +D +R  FE N  G + +T+  LPL+R+  GRI+   S++GR+  P  G Y A+K  +EA+ DALR ELLP+   VSL+EPG + TPI  K      V+++   A  YP    + Y D               A   SRV + V+ ALT  RPKTRY      +V     IQA  K+++PDRL+D+++
Sbjct:    9 RGAVVITGASTGIGRACALELDRLGFRVFAGVRNDTDGIGLKDASSGR---ILPVMLDVTDYGSISAAAGTVAQAVG---DGGIKGLVNNAGIVVGGPFEFLPLDAIRRQFEVNFFGQIAVTRAFLPLLRKGHGRIVNMGSISGRVVTPFVGPYGASKHALEALSDALRVELLPWGIEVSLIEPGSIATPIWKK-----SVSSAAATAAAYPDKAQELYGDAMRAVQAAALRKGEEAIPASRVVQAVVHALTAARPKTRY------LVGRGAHIQALLKKILPDRLLDRLI 282          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: WP_083275599.1 (SDR family NAD(P)-dependent oxidoreductase [Pseudonocardia sp. HH130630-07])

HSP 1 Score: 165.2 bits (417), Expect = 3.600e-37
Identity = 111/292 (38.01%), Postives = 156/292 (53.42%), Query Frame = 0
Query:   63 PVPPKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTI-SKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDS--EEVANSTTAAQTYPWYYTKKYFDIFNFGINHAGDVSR-----VARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDK 347
            PV  +G VLVTG S+G+GR     LA+SG+ V AGVRR    T+   I +  R   +HP+  DVT ++ +     E +R  G        GLVNNAGI    P+E    D++R   E N++G + +TQ  LP +RR +GRI+  +S  G +  P  G Y+  +   EA+ DALR+EL P    VS+V+PG ++TPI  K+ D+  E +A S   A TY   +T+     F  G       SR     VAR VL ALT  RP+TRY            A++  +L+PD L+D+
Sbjct:   23 PVSARGTVLVTGASSGLGRHCALTLARSGFTVLAGVRR---GTDGERIAADARPGAVHPLRFDVTDEDAVRAAAAEAERLGG------IRGLVNNAGICVSAPLECLPPDELRRQLEINVVGQVSVTQAFLPQLRRHRGRIVNVTSGLGSLAVPYMGAYAMAQFAKEAMSDALRRELAPLGVRVSVVQPGAILTPIWDKVSDTADEVLARSPDVADTYRDVFTR-----FLRGNAEGARTSRTTPDDVARAVLRALTAARPRTRYPVGR----DARSAVRLARLLPDGLLDR 296          
BLAST of NO13G02470 vs. NCBI_GenBank
Match: XP_005855938.1 (short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526] >EKU20411.1 short-chain dehydrogenase reductase sdr [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 164.1 bits (414), Expect = 7.900e-37
Identity = 115/309 (37.22%), Postives = 167/309 (54.05%), Query Frame = 0
Query:   50 LAVWMGL---LLNPSYPVPPKG-IVLVTGTSTGIGREVVNMLAKSGYHVFAGVRRQESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDM----KFAGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKGRIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEPGFVMTPILSKILDSEEVANSTTAAQTYPWYYTKKYFDIFNFGIN----HAGDVSRVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQ-AKQLIPDRLMD 346
            +A+++GL   +  PS+PVPP G  V++TG+STGIGR     LA +G+ VFAGVRR     +  T+ +    ++ P+LLDVT  +H   V+   +      +DM    K AGLVNNAGIG   P+E   +  +R + E N++G L +TQ  LP +RRD+GRII   S AG       G YS++K  +EA+ DALR EL P+  SVSL+EPG + + I  K +       + T +Q Y  Y  ++ FD +   ++     AG        +L ALT   P++RY       +  WL        +PD L+D
Sbjct:   24 VALFLGLIHSMTKPSFPVPPSGSAVVITGSSTGIGRHSAAGLAAAGFLVFAGVRR---VRDVETLVEAYPGRVFPLLLDVT--DHDGGVMRAAEEVRETLEDMGGKVKLAGLVNNAGIGLAMPLELLPLSRLRQVMEVNVVGLLGVTQAFLPQLRRDQGRIINVGSAAGFTVPVTYGAYSSSKYALEAISDALRLELRPWRISVSLLEPGTIESEIRRKNVGDAAPFKNLTESQ-YVLY--QQIFDTYEQRVDALERAAGSPQLTTDAILHALTSSTPQSRYVLGAYQGLSLWLLRHVVLPFVPDYLLD 324          
The following BLAST results are available for this feature:
BLAST of NO13G02470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_004990606.13.800e-4740.13oxidoreductase [Salpingoeca rosetta] >EGD77262.1 o... [more]
XP_001747089.17.900e-4535.63hypothetical protein [Monosiga brevicollis MX1] >E... [more]
EWM25314.13.400e-4033.33short-chain dehydrogenase reductase sdr [Nannochlo... [more]
WP_068207734.18.500e-3937.59KR domain-containing protein [Rathayibacter tanace... [more]
XP_005855521.13.200e-3833.441-acylglycerone phosphate reductase, partial [Nann... [more]
WP_094919760.14.200e-3838.73KR domain-containing protein [Pseudonocardia sp. M... [more]
WP_056868449.17.200e-3835.79SDR family NAD(P)-dependent oxidoreductase [Rathay... [more]
OGW19404.11.200e-3738.49short-chain dehydrogenase/reductase [Nitrospirae b... [more]
WP_083275599.13.600e-3738.01SDR family NAD(P)-dependent oxidoreductase [Pseudo... [more]
XP_005855938.17.900e-3737.22short-chain dehydrogenase reductase sdr [Nannochlo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001648NSK001648Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02470.1NO13G02470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596250gene_6764Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02470.1NO13G02470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02470 ID=NO13G02470|Name=NO13G02470|organism=Nannochloropsis oceanica|type=gene|length=1548bp
ACAGGAATATTCTAATCCTTTCCAGCGCACGTAAAAGATAATGCCGCCAC
GCCGCATCCCTCCCCGCCGTGCCAGCGAGGGTTCCATTGCAGGTGGCATC
TCACAGACCGGGCAGGTGGCTTCCCGCGCTTGGCAGAACCCGCTGATGCG
CAATACTTTCATCGGGATAGCTACAGTGGTGGGGGCCTTGGCAGTCTGGA
TGGGGCTCTTGTTGAATCCTTCCTACCCTGTCCCGCCCAAGGGTATCGTT
CTTGTCACAGgtcagcgagggctgggagggttaggcagagaagttaggaa
aaaatcaatggatttgtcctggcgtagctagggctctcgttggcatccag
attcaaccatacgaagcagactgtccgggttgcatgcatggtgtcacttt
cacgatgcattgtcaagagggatctcaacccgaatcttccgatttttttt
cttaattctctttcagGCACATCCACAGGCATCGGGCGGGAAGTGGTGAA
TATGCTGGCTAAAAGCGGGTACCACGTATTTGCAGGCGTGCGTCGCCAGG
AGAGTGCCACTGAATGGAATACAATCAGCAAGTGGCGACAGCACCAAATC
CACCCCGTGCTGCTAGACGTGACGCTTAAGGAGCACATTGACAATGTAGT
GACGGAGATTAAGCGCTACTCGGGCGAGCACGATGACATGAAGTTTGCGG
GCTTGGTCAATAATGCAGGCATCGGATGCCACCGGCCTGTAGAACACCAC
GACATGGACGACGTACGGAACATGTTTGAGACGAATCTTTTGGGTCCGCT
GTATCTGACGCAGAAACTGCTTCCACTCATCCGTCGAGACAAAGGGCGTA
TCATTTTCACCTCATCCCTGGCGGGGCGCATCACGCAGCCGAAGGAAGGG
ATTTATTCCGCGACCAAGAGCGGCGTGGAGGCCGTTGGAGATGCCCTGCG
ACAGGAACTTCTTCCATACGAATGCTCGGTGAGTTTGGTGGAGCCGGGTT
TCGTCATGACTCCGATTTTGAGCAAGATTCTAGATTCGGAAGAAGTGGCG
AATTCCACCACGGCAGCCCAGACCTATCCATGGTACTATACCAAGAAGTA
CTTCGACATATTCAATTTCGGGATCAACCACGCTGGTGACGTTTCTCGGG
TAGCTCGCCAAGTTTTAGCGGCTCTAACAGATATCCGCCCAAAAACACGC
TACGCGACGACGAACGTCTTGATGGTGCCAACATGGCTGGCTATTCAAGC
TAAGCAGTTGATTCCCGATCGTTTGATGGACAAAATTTTAACGCAATAAA
GAGGCAAAAGCGAGCGCGCAGCGACGGAGGAAAGGAGAATGGGAACGAAA
ATTACCCACCGGAAGATTTTAAAAAACGATAGAAAGCAAGGCTTCATTTT
GCATCATTGCTTCTCCACCAAAAATTACTTCACCAAGAAAAAATGGATGC
GAGAGCGATCAAAACAATACAGCAACGGCCTGATAAGAGAAAAAAGAAAG
AATACAAGACAACAAGGCAACGAAAACATAAAAGAAACCCCCTAAAAA
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protein sequence of NO13G02470.1

>NO13G02470.1-protein ID=NO13G02470.1-protein|Name=NO13G02470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=351bp
MPPRRIPPRRASEGSIAGGISQTGQVASRAWQNPLMRNTFIGIATVVGAL
AVWMGLLLNPSYPVPPKGIVLVTGTSTGIGREVVNMLAKSGYHVFAGVRR
QESATEWNTISKWRQHQIHPVLLDVTLKEHIDNVVTEIKRYSGEHDDMKF
AGLVNNAGIGCHRPVEHHDMDDVRNMFETNLLGPLYLTQKLLPLIRRDKG
RIIFTSSLAGRITQPKEGIYSATKSGVEAVGDALRQELLPYECSVSLVEP
GFVMTPILSKILDSEEVANSTTAAQTYPWYYTKKYFDIFNFGINHAGDVS
RVARQVLAALTDIRPKTRYATTNVLMVPTWLAIQAKQLIPDRLMDKILTQ
*
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Synonyms
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