NO13G02450, NO13G02450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EWM21907.1 (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 494.6 bits (1272), Expect = 2.900e-136 Identity = 259/406 (63.79%), Postives = 307/406 (75.62%), Query Frame = 0 Query: 1 MWRTGLGILMFWARFSKASFIASPYTVDSIKAMASRRTPLGIAHTFSGLGLDRSRVETELKEVAAFESALKTDGAAFALFHGTSALITKERQTKIVYQTGDMLQKLYGISIEQLQPTNKSSRLTTSGN--SSSAPYFPCVALGASVSGWAFAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRNKL 403 MW L LMF R S+A + + ++RR+PLGI HTFSG+ +DRSRVE ELKE +AF++AL++ GAAFALFHGTSAL+ + K+ + + LQ LY IS++Q +P+ LT N +S P +PC+ALGAS SGWAFAVDVS RS+ + E K EA G ++FEPVRALLA L + DIA+AGLGAS LAWHRQHQ CG+CGS M+AVE GGRRACTS CRNRAYPRVDPVVIALV DP RD +LLGRQ VYRP M+SCLAGYV CESLEEAVRREVKEESGI VG++ YHSSQPWPIGRGASCQ+MVG+ ATATS +I +DT+ELEDCRWFSRAEVA A+ELVV+ P+ E+ LSIPGPYAIAHHLIK+WL TT + GRNKL Sbjct: 1 MWEPLLVFLMF-CRSSQAF---------TNRMHSTRRSPLGIVHTFSGMDIDRSRVEAELKEASAFQNALRSHGAAFALFHGTSALVITDSPMKLAFHDAEKLQTLYEISLQQFEPS-----LTCISNDVGNSIPIYPCIALGASASGWAFAVDVSNRSRNEFEVKNEAEGN--LRFEPVRALLATLNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGASCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEAEELVVARRPGPSDESSKTLSIPGPYAIAHHLIKNWLSTTKAPLQASGRNKL 389
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EAZ35782.1 (hypothetical protein OsJ_20073 [Oryza sativa Japonica Group]) HSP 1 Score: 209.9 bits (533), Expect = 1.400e-50 Identity = 121/286 (42.31%), Postives = 155/286 (54.20%), Query Frame = 0 Query: 149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVL------TEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-------------------------KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401 +AVDVS+R E AG+ + F +R L+ D+A+AG ++L WH + CG CGS + E G R+ C+ SC+ R YPRVDPVVI LV D D LL RQ + P M+SCLAG++ ESLEEAVRRE EE+GI VG+V+YHSSQPWP+G CQ+MVG+ A A S++I +D ELED +W SR +V A K +SA L E P + +PGPYAIAHHLI W P+ S N Sbjct: 327 WAVDVSERD-------GEGAGDGSA-FVDLRTLMVATDWRDKDAMGDLAIAGHARALLEWHSTAKFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKRQSISADLKIESEEPAPMFVPGPYAIAHHLISSWAFEGAPKAPSSFSN 604
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_015641243.1 (PREDICTED: nudix hydrolase 19, chloroplastic [Oryza sativa Japonica Group] >BAD67649.1 MutT/nudix protein-like [Oryza sativa Japonica Group] >BAF18671.1 Os06g0141100 [Oryza sativa Japonica Group] >EAY99597.1 hypothetical protein OsI_21575 [Oryza sativa Indica Group] >BAS96083.1 Os06g0141166 [Oryza sativa Japonica Group]) HSP 1 Score: 209.9 bits (533), Expect = 1.400e-50 Identity = 121/286 (42.31%), Postives = 155/286 (54.20%), Query Frame = 0 Query: 149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVL------TEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-------------------------KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401 +AVDVS+R E AG+ + F +R L+ D+A+AG ++L WH + CG CGS + E G R+ C+ SC+ R YPRVDPVVI LV D D LL RQ + P M+SCLAG++ ESLEEAVRRE EE+GI VG+V+YHSSQPWP+G CQ+MVG+ A A S++I +D ELED +W SR +V A K +SA L E P + +PGPYAIAHHLI W P+ S N Sbjct: 127 WAVDVSERD-------GEGAGDGSA-FVDLRTLMVATDWRDKDAMGDLAIAGHARALLEWHSTAKFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKRQSISADLKIESEEPAPMFVPGPYAIAHHLISSWAFEGAPKAPSSFSN 404
BLAST of NO13G02450 vs. NCBI_GenBank
Match: BAK03356.1 (predicted protein [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 207.2 bits (526), Expect = 9.400e-50 Identity = 122/287 (42.51%), Postives = 153/287 (53.31%), Query Frame = 0 Query: 149 FAVDVSKRSKEDVESKAEA-AGEVAVQFEPVRALLAVLTEED------IAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRAC--TSCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV-------------------------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401 +AVDVS ++E A AGE F +R L+ D +A+AG ++L WH + CG CG+ + VE G R+ C SC+ R YPRVDPVVI LV D D LL RQ + P M+SCLAG++ ESLEEAVRRE EE+GI VG V+YHSSQPWP+G CQ+MVG+ A A S+DI +D ELED +W SR +V A S+ L E P + +PGPYAIAHHLI W L P+ S N Sbjct: 119 WAVDVS-----ELEGAGFAGAGEEQSAFVDLRTLMVAADWRDTDAMGELAIAGHARALLEWHNTAKFCGACGAKAVPVEAGTRKQCGNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVVYHSSQPWPVGPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSWALEGAPKLPSSFSN 400
BLAST of NO13G02450 vs. NCBI_GenBank
Match: GAX85463.1 (hypothetical protein CEUSTIGMA_g12879.t1 [Chlamydomonas eustigma]) HSP 1 Score: 206.5 bits (524), Expect = 1.600e-49 Identity = 106/258 (41.09%), Postives = 153/258 (59.30%), Query Frame = 0 Query: 147 WAFAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT-SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASG 398 W FAVD+S ++ S + + + V+ +R L+ L+ E A+AG ++ WH HQ+C CG P + VE G RR CT ++ YPR DPVVI LV P + LLGR + + GM++CL+G++ QCES+EEAVRREV+EE+ + V V +QPWPIGR +C++M+G A A S +I ++TDE+ED +W+ R+E+ A +L +L G IP P A+AHHLI+ W+L P SG Sbjct: 164 WTFAVDISS-CRQGFLSFLKTSCGLDVKMGDLRMLMPTLSREACAIAGQAVALAQWHDAHQYCPRCGGPTVPVETGLRRRCTLDVAHKLYPRTDPVVIMLVESPDGNRALLGRSKKFTSGMYTCLSGFIDQCESVEEAVRREVREEARVQVDQVHILGTQPWPIGRYGTCELMLGCFAKAKSYEIMVNTDEMEDVQWYDRSELLAAVQLYEQNKEETMQSLQQRSMESLGFWIPPPVAVAHHLIRQWVLHGEPFFPSG 420
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_002977812.2 (nudix hydrolase 19, chloroplastic [Selaginella moellendorffii] >XP_024538671.1 nudix hydrolase 19, chloroplastic [Selaginella moellendorffii]) HSP 1 Score: 206.5 bits (524), Expect = 1.600e-49 Identity = 120/276 (43.48%), Postives = 157/276 (56.88%), Query Frame = 0 Query: 150 AVDVSKRSKED------VESKAEAAGEVAVQFEPVRALL--AVLTEEDI----AVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387 A+D + R D + ++ E G F +R L+ A T+E++ ++AG ++L WHRQ Q CG CG+ + G RR C+S C + YPR+DPVVI LV DP RD LL Q Y P M+SCLAG++ ESLEEAVRRE +EE+G+ V +++YHSSQPWP+G G SCQ+MVG+ A AT+ DI +D ELED RW SR +V A + A TG E PG G+ +PGPYAIAHHLI W Sbjct: 91 AIDATPRQPRDSSNGRAIAARFEKNGGGEAGFVDLRTLMIAAEWTDEEVMGELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDRALLAHQPKYVPRMWSCLAGFIEPGESLEEAVRRETREETGVEVSNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 366
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EFJ19398.1 (hypothetical protein SELMODRAFT_54773, partial [Selaginella moellendorffii]) HSP 1 Score: 206.1 bits (523), Expect = 2.100e-49 Identity = 121/276 (43.84%), Postives = 157/276 (56.88%), Query Frame = 0 Query: 150 AVDVSKRSKED------VESKAEAAGEVAVQFEPVRALL--AVLTEEDI----AVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387 A+D + R D + ++ E G F +R L+ A T+E+I ++AG ++L WHRQ Q CG CG+ + G RR C+S C + YPR+DPVVI LV DP RD LL Q Y M+SCLAG++ ESLEEAVRRE +EE+G+ VG+++YHSSQPWP+G G SCQ+MVG+ A AT+ DI +D ELED RW SR +V A + A TG E PG G+ +PGPYAIAHHLI W Sbjct: 60 AIDATPRQPRDSSNGRAIAARFEKNGGGEAGFVDLRTLMIAAEWTDEEIMGELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDKALLAHQPKYVSRMWSCLAGFIEPGESLEEAVRRETREETGVEVGNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 335
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_002979509.2 (nudix hydrolase 19, chloroplastic [Selaginella moellendorffii]) HSP 1 Score: 206.1 bits (523), Expect = 2.100e-49 Identity = 121/276 (43.84%), Postives = 157/276 (56.88%), Query Frame = 0 Query: 150 AVDVSKRSKED------VESKAEAAGEVAVQFEPVRALL--AVLTEEDI----AVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387 A+D + R D + ++ E G F +R L+ A T+E+I ++AG ++L WHRQ Q CG CG+ + G RR C+S C + YPR+DPVVI LV DP RD LL Q Y M+SCLAG++ ESLEEAVRRE +EE+G+ VG+++YHSSQPWP+G G SCQ+MVG+ A AT+ DI +D ELED RW SR +V A + A TG E PG G+ +PGPYAIAHHLI W Sbjct: 91 AIDATPRQPRDSSNGRAIAARFEKNGGGEAGFVDLRTLMIAAEWTDEEIMGELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDKALLAHQPKYVSRMWSCLAGFIEPGESLEEAVRRETREETGVEVGNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 366
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EFJ21150.1 (hypothetical protein SELMODRAFT_54771, partial [Selaginella moellendorffii]) HSP 1 Score: 205.7 bits (522), Expect = 2.700e-49 Identity = 108/225 (48.00%), Postives = 137/225 (60.89%), Query Frame = 0 Query: 189 DIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387 ++++AG ++L WHRQ Q CG CG+ + G RR C+S C + YPR+DPVVI LV DP RD LL Q Y P M+SCLAG++ ESLEEAVRRE +EE+G+ V +++YHSSQPWP+G G SCQ+MVG+ A AT+ DI +D ELED RW SR +V A + A TG E PG G+ +PGPYAIAHHLI W Sbjct: 27 ELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDRALLAHQPKYVPRMWSCLAGFIEPGESLEEAVRRETREETGVEVSNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 251
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_015693447.1 (PREDICTED: nudix hydrolase 19, chloroplastic, partial [Oryza brachyantha]) HSP 1 Score: 205.3 bits (521), Expect = 3.600e-49 Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 0 Query: 189 DIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-------------------------KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401 D+A+AG ++L WH + CG CGS + E G R+ C+ SC+ R YPRVDPVVI LV D D LL RQ + P M+SCLAG++ ESLEEAVRRE EE+GI VG+V+YHSSQPWP+G CQ+MVG+ A A S++I +D ELED +W SR +V A K +SA L+ E P + PGP+AIAHHLI W P+ S N Sbjct: 111 DLAIAGHARALLEWHSTARFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDCALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWQSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKGQSISADLNVETEEPAPMFFPGPFAIAHHLISSWAFEGAPKVPSSFSN 350 The following BLAST results are available for this feature:
BLAST of NO13G02450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G02450 ID=NO13G02450|Name=NO13G02450|organism=Nannochloropsis oceanica|type=gene|length=3514bpback to top protein sequence of NO13G02450.1 >NO13G02450.1-protein ID=NO13G02450.1-protein|Name=NO13G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bpback to top Synonyms
Publications
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