NO13G02450, NO13G02450 (gene) Nannochloropsis oceanica

Overview
NameNO13G02450
Unique NameNO13G02450
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3514
Alignment locationchr13:677474..680987 +

Link to JBrowse

Properties
Property NameValue
DescriptionNudix hydrolase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:677474..680987 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR015376Znr_NADH_PPase
IPR015375NADH_PPase-like_N
IPR000086NUDIX_hydrolase_dom
Homology
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EWM21907.1 (nudix hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 494.6 bits (1272), Expect = 2.900e-136
Identity = 259/406 (63.79%), Postives = 307/406 (75.62%), Query Frame = 0
Query:    1 MWRTGLGILMFWARFSKASFIASPYTVDSIKAMASRRTPLGIAHTFSGLGLDRSRVETELKEVAAFESALKTDGAAFALFHGTSALITKERQTKIVYQTGDMLQKLYGISIEQLQPTNKSSRLTTSGN--SSSAPYFPCVALGASVSGWAFAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRNKL 403
            MW   L  LMF  R S+A          + +  ++RR+PLGI HTFSG+ +DRSRVE ELKE +AF++AL++ GAAFALFHGTSAL+  +   K+ +   + LQ LY IS++Q +P+     LT   N   +S P +PC+ALGAS SGWAFAVDVS RS+ + E K EA G   ++FEPVRALLA L + DIA+AGLGAS LAWHRQHQ CG+CGS M+AVE GGRRACTS  CRNRAYPRVDPVVIALV DP RD +LLGRQ VYRP M+SCLAGYV  CESLEEAVRREVKEESGI VG++ YHSSQPWPIGRGASCQ+MVG+ ATATS +I +DT+ELEDCRWFSRAEVA A+ELVV+    P+ E+   LSIPGPYAIAHHLIK+WL TT     + GRNKL
Sbjct:    1 MWEPLLVFLMF-CRSSQAF---------TNRMHSTRRSPLGIVHTFSGMDIDRSRVEAELKEASAFQNALRSHGAAFALFHGTSALVITDSPMKLAFHDAEKLQTLYEISLQQFEPS-----LTCISNDVGNSIPIYPCIALGASASGWAFAVDVSNRSRNEFEVKNEAEGN--LRFEPVRALLATLNQRDIAMAGLGASTLAWHRQHQFCGLCGSRMVAVEAGGRRACTSETCRNRAYPRVDPVVIALVQDPVRDKILLGRQSVYRPMMYSCLAGYVGPCESLEEAVRREVKEESGIDVGEMSYHSSQPWPIGRGASCQMMVGFTATATSTEIHIDTNELEDCRWFSRAEVAEAEELVVARRPGPSDESSKTLSIPGPYAIAHHLIKNWLSTTKAPLQASGRNKL 389          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EAZ35782.1 (hypothetical protein OsJ_20073 [Oryza sativa Japonica Group])

HSP 1 Score: 209.9 bits (533), Expect = 1.400e-50
Identity = 121/286 (42.31%), Postives = 155/286 (54.20%), Query Frame = 0
Query:  149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVL------TEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-------------------------KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            +AVDVS+R         E AG+ +  F  +R L+            D+A+AG   ++L WH   + CG CGS  +  E G R+ C+  SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG+V+YHSSQPWP+G     CQ+MVG+ A A S++I +D  ELED +W SR +V  A                         K   +SA L    E P  + +PGPYAIAHHLI  W     P+  S   N
Sbjct:  327 WAVDVSERD-------GEGAGDGSA-FVDLRTLMVATDWRDKDAMGDLAIAGHARALLEWHSTAKFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKRQSISADLKIESEEPAPMFVPGPYAIAHHLISSWAFEGAPKAPSSFSN 604          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_015641243.1 (PREDICTED: nudix hydrolase 19, chloroplastic [Oryza sativa Japonica Group] >BAD67649.1 MutT/nudix protein-like [Oryza sativa Japonica Group] >BAF18671.1 Os06g0141100 [Oryza sativa Japonica Group] >EAY99597.1 hypothetical protein OsI_21575 [Oryza sativa Indica Group] >BAS96083.1 Os06g0141166 [Oryza sativa Japonica Group])

HSP 1 Score: 209.9 bits (533), Expect = 1.400e-50
Identity = 121/286 (42.31%), Postives = 155/286 (54.20%), Query Frame = 0
Query:  149 FAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVL------TEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-------------------------KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            +AVDVS+R         E AG+ +  F  +R L+            D+A+AG   ++L WH   + CG CGS  +  E G R+ C+  SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG+V+YHSSQPWP+G     CQ+MVG+ A A S++I +D  ELED +W SR +V  A                         K   +SA L    E P  + +PGPYAIAHHLI  W     P+  S   N
Sbjct:  127 WAVDVSERD-------GEGAGDGSA-FVDLRTLMVATDWRDKDAMGDLAIAGHARALLEWHSTAKFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIQVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKRQSISADLKIESEEPAPMFVPGPYAIAHHLISSWAFEGAPKAPSSFSN 404          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: BAK03356.1 (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 207.2 bits (526), Expect = 9.400e-50
Identity = 122/287 (42.51%), Postives = 153/287 (53.31%), Query Frame = 0
Query:  149 FAVDVSKRSKEDVESKAEA-AGEVAVQFEPVRALLAVLTEED------IAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRAC--TSCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV-------------------------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            +AVDVS     ++E    A AGE    F  +R L+      D      +A+AG   ++L WH   + CG CG+  + VE G R+ C   SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG V+YHSSQPWP+G     CQ+MVG+ A A S+DI +D  ELED +W SR +V  A                              S+ L    E P  + +PGPYAIAHHLI  W L   P+  S   N
Sbjct:  119 WAVDVS-----ELEGAGFAGAGEEQSAFVDLRTLMVAADWRDTDAMGELAIAGHARALLEWHNTAKFCGACGAKAVPVEAGTRKQCGNESCKKRIYPRVDPVVIMLVIDKENDRALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGQVVYHSSQPWPVGPNTMPCQLMVGFFAYAKSLDIHVDKKELEDAQWHSREDVKKALTFAEYEKAQRSSALKVNQICKGAERGPSTSSDLSVESEEPAPMFVPGPYAIAHHLISSWALEGAPKLPSSFSN 400          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: GAX85463.1 (hypothetical protein CEUSTIGMA_g12879.t1 [Chlamydomonas eustigma])

HSP 1 Score: 206.5 bits (524), Expect = 1.600e-49
Identity = 106/258 (41.09%), Postives = 153/258 (59.30%), Query Frame = 0
Query:  147 WAFAVDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEEDIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT-SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGAKELV------VSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASG 398
            W FAVD+S   ++   S  + +  + V+   +R L+  L+ E  A+AG   ++  WH  HQ+C  CG P + VE G RR CT    ++ YPR DPVVI LV  P  +  LLGR + +  GM++CL+G++ QCES+EEAVRREV+EE+ + V  V    +QPWPIGR  +C++M+G  A A S +I ++TDE+ED +W+ R+E+  A +L          +L        G  IP P A+AHHLI+ W+L   P   SG
Sbjct:  164 WTFAVDISS-CRQGFLSFLKTSCGLDVKMGDLRMLMPTLSREACAIAGQAVALAQWHDAHQYCPRCGGPTVPVETGLRRRCTLDVAHKLYPRTDPVVIMLVESPDGNRALLGRSKKFTSGMYTCLSGFIDQCESVEEAVRREVREEARVQVDQVHILGTQPWPIGRYGTCELMLGCFAKAKSYEIMVNTDEMEDVQWYDRSELLAAVQLYEQNKEETMQSLQQRSMESLGFWIPPPVAVAHHLIRQWVLHGEPFFPSG 420          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_002977812.2 (nudix hydrolase 19, chloroplastic [Selaginella moellendorffii] >XP_024538671.1 nudix hydrolase 19, chloroplastic [Selaginella moellendorffii])

HSP 1 Score: 206.5 bits (524), Expect = 1.600e-49
Identity = 120/276 (43.48%), Postives = 157/276 (56.88%), Query Frame = 0
Query:  150 AVDVSKRSKED------VESKAEAAGEVAVQFEPVRALL--AVLTEEDI----AVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387
            A+D + R   D      + ++ E  G     F  +R L+  A  T+E++    ++AG   ++L WHRQ Q CG CG+     + G RR C+S  C  + YPR+DPVVI LV DP RD  LL  Q  Y P M+SCLAG++   ESLEEAVRRE +EE+G+ V +++YHSSQPWP+G G  SCQ+MVG+ A AT+ DI +D  ELED RW SR +V  A      + A   TG          E PG             G+ +PGPYAIAHHLI  W
Sbjct:   91 AIDATPRQPRDSSNGRAIAARFEKNGGGEAGFVDLRTLMIAAEWTDEEVMGELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDRALLAHQPKYVPRMWSCLAGFIEPGESLEEAVRRETREETGVEVSNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 366          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EFJ19398.1 (hypothetical protein SELMODRAFT_54773, partial [Selaginella moellendorffii])

HSP 1 Score: 206.1 bits (523), Expect = 2.100e-49
Identity = 121/276 (43.84%), Postives = 157/276 (56.88%), Query Frame = 0
Query:  150 AVDVSKRSKED------VESKAEAAGEVAVQFEPVRALL--AVLTEEDI----AVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387
            A+D + R   D      + ++ E  G     F  +R L+  A  T+E+I    ++AG   ++L WHRQ Q CG CG+     + G RR C+S  C  + YPR+DPVVI LV DP RD  LL  Q  Y   M+SCLAG++   ESLEEAVRRE +EE+G+ VG+++YHSSQPWP+G G  SCQ+MVG+ A AT+ DI +D  ELED RW SR +V  A      + A   TG          E PG             G+ +PGPYAIAHHLI  W
Sbjct:   60 AIDATPRQPRDSSNGRAIAARFEKNGGGEAGFVDLRTLMIAAEWTDEEIMGELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDKALLAHQPKYVSRMWSCLAGFIEPGESLEEAVRRETREETGVEVGNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 335          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_002979509.2 (nudix hydrolase 19, chloroplastic [Selaginella moellendorffii])

HSP 1 Score: 206.1 bits (523), Expect = 2.100e-49
Identity = 121/276 (43.84%), Postives = 157/276 (56.88%), Query Frame = 0
Query:  150 AVDVSKRSKED------VESKAEAAGEVAVQFEPVRALL--AVLTEEDI----AVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387
            A+D + R   D      + ++ E  G     F  +R L+  A  T+E+I    ++AG   ++L WHRQ Q CG CG+     + G RR C+S  C  + YPR+DPVVI LV DP RD  LL  Q  Y   M+SCLAG++   ESLEEAVRRE +EE+G+ VG+++YHSSQPWP+G G  SCQ+MVG+ A AT+ DI +D  ELED RW SR +V  A      + A   TG          E PG             G+ +PGPYAIAHHLI  W
Sbjct:   91 AIDATPRQPRDSSNGRAIAARFEKNGGGEAGFVDLRTLMIAAEWTDEEIMGELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDKALLAHQPKYVSRMWSCLAGFIEPGESLEEAVRRETREETGVEVGNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 366          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: EFJ21150.1 (hypothetical protein SELMODRAFT_54771, partial [Selaginella moellendorffii])

HSP 1 Score: 205.7 bits (522), Expect = 2.700e-49
Identity = 108/225 (48.00%), Postives = 137/225 (60.89%), Query Frame = 0
Query:  189 DIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACTS--CRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRG-ASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-KELVVSAALDPTG----------ENPG-------------GLSIPGPYAIAHHLIKHW 387
            ++++AG   ++L WHRQ Q CG CG+     + G RR C+S  C  + YPR+DPVVI LV DP RD  LL  Q  Y P M+SCLAG++   ESLEEAVRRE +EE+G+ V +++YHSSQPWP+G G  SCQ+MVG+ A AT+ DI +D  ELED RW SR +V  A      + A   TG          E PG             G+ +PGPYAIAHHLI  W
Sbjct:   27 ELSIAGHARALLEWHRQVQFCGRCGTITHLCDAGQRRRCSSIDCNYKLYPRIDPVVIMLVIDPERDRALLAHQPKYVPRMWSCLAGFIEPGESLEEAVRRETREETGVEVSNIVYHSSQPWPVGPGNMSCQLMVGFFAVATTFDIQVDKKELEDARWHSREDVQKALSNADYTRAQKATGINVYKTCLGEEMPGRNSSPMNMVAAGEGIFVPGPYAIAHHLISTW 251          
BLAST of NO13G02450 vs. NCBI_GenBank
Match: XP_015693447.1 (PREDICTED: nudix hydrolase 19, chloroplastic, partial [Oryza brachyantha])

HSP 1 Score: 205.3 bits (521), Expect = 3.600e-49
Identity = 108/240 (45.00%), Postives = 137/240 (57.08%), Query Frame = 0
Query:  189 DIAVAGLGASILAWHRQHQHCGVCGSPMIAVEGGGRRACT--SCRNRAYPRVDPVVIALVTDPARDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMYHSSQPWPIGRGA-SCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA-------------------------KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN 401
            D+A+AG   ++L WH   + CG CGS  +  E G R+ C+  SC+ R YPRVDPVVI LV D   D  LL RQ  + P M+SCLAG++   ESLEEAVRRE  EE+GI VG+V+YHSSQPWP+G     CQ+MVG+ A A S++I +D  ELED +W SR +V  A                         K   +SA L+   E P  +  PGP+AIAHHLI  W     P+  S   N
Sbjct:  111 DLAIAGHARALLEWHSTARFCGACGSRAVPAEAGRRKQCSNESCKKRIYPRVDPVVIMLVIDKENDCALLSRQSRFVPRMWSCLAGFIEPGESLEEAVRRETWEETGIEVGEVIYHSSQPWPVGPSTMPCQLMVGFFAYAKSLEIHVDKKELEDAQWQSREDVKKALTFAEYEKAQRTNALKVNQICKGVEKGQSISADLNVETEEPAPMFFPGPFAIAHHLISSWAFEGAPKVPSSFSN 350          
The following BLAST results are available for this feature:
BLAST of NO13G02450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21907.12.900e-13663.79nudix hydrolase [Nannochloropsis gaditana][more]
EAZ35782.11.400e-5042.31hypothetical protein OsJ_20073 [Oryza sativa Japon... [more]
XP_015641243.11.400e-5042.31PREDICTED: nudix hydrolase 19, chloroplastic [Oryz... [more]
BAK03356.19.400e-5042.51predicted protein [Hordeum vulgare subsp. vulgare][more]
GAX85463.11.600e-4941.09hypothetical protein CEUSTIGMA_g12879.t1 [Chlamydo... [more]
XP_002977812.21.600e-4943.48nudix hydrolase 19, chloroplastic [Selaginella moe... [more]
EFJ19398.12.100e-4943.84hypothetical protein SELMODRAFT_54773, partial [Se... [more]
XP_002979509.22.100e-4943.84nudix hydrolase 19, chloroplastic [Selaginella moe... [more]
EFJ21150.12.700e-4948.00hypothetical protein SELMODRAFT_54771, partial [Se... [more]
XP_015693447.13.600e-4945.00PREDICTED: nudix hydrolase 19, chloroplastic, part... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001649NSK001649Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02450.1NO13G02450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100070g22gene8527Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02450.1NO13G02450.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02450 ID=NO13G02450|Name=NO13G02450|organism=Nannochloropsis oceanica|type=gene|length=3514bp
GCATTTATCTGACAATTGTACTTCTCATCGATTTTCTGCAAGCCTCTTCA
TGTCTTCGTGACGTTAGTCGCTCGGGGGGGTGTCTCACTATAAACATCCA
ATCCTATTTCGTTCGCTCTGTTCAAGCATCATGTTCCTTTCTTTGCCACT
CTACAACTACGTTCTTTTATTTCTGTGTTTGTGTGTATCCCTTCATCGTC
TCCTTTTCAATACTCTCTTTCAATCTCCTCCACTCCTTCCTCCGCAACTA
TATTCACGCGGAAAAGGGGTCCAATTCCGAAGGTCGCCATCACATGATGT
TGGGTCCTCGCCATTCCCCTCGTGGAAAGCGGAGAAGAGTCTCATTATCC
ATTCACTCCTCCATTTCCCCCCCAACCAGGCCTAAAACCCCTCCTCCTCA
AATTTGACCGCCTCATCCTTTAAAGCTGGTCGCCGCATTCCCCAAAATCG
CGCCAAAGGCACCCCTTCCCCTTCATTCGATTCACCACAAAATGTAAACA
GCCAGCCCAAATGTAAGCTGCATCGCCAACAATAAGCAATCGTCCACGCA
TACCCTTTAAACCACGAATTGTCCCTCTCGGGCTCCCCTTCCAACGCTAC
TGCCTCTTCCCCCACATCTGCCCCTTTCAGCAGCTCTCGCAGCGTCAACG
TCTGGTGCACGATTCCCGCAGGATTACTGTACGCCCCCACCGTACCCTCC
GCACCAGGCACGCTAAAAACGGCATCTTTGCTCGCCATGGGATTATCGCA
TCCCGCGCAGCAAAGCCTGCGTTCCGCTGTGTTTTTCAGTAATTCGATCT
CTTTTCGAAGCCTGTACACAGCTGATTCCATCGACAGCAACTCCTGTCGT
GCTATGTCGTCAAGTGGTAAATTGGCAGCCAAGCGAAATGAAAACGCCAC
CGGTTCCACCGTCAAACCTGCAATGTCCTCCCCCCCTCTGCCGTGCCTTT
CGCCTTCTCCTTCTTGGCTCTCCAGCAAGCGCGTGAATGCCAAACCGGAC
GCACCCATAATCCCCTCCCAAGCCGCCACCGATTGGATGATGCCCTGTGC
TTTCTGCACCAAATTGGGAGCATATAAAAAGCTCGATCGAAACCAGTACA
TTGATTGGTGTTGCTTGATGGCTGCCGTACTCAGGGGTCTTTGCCATTGT
GGCAAGCGCGGTGGTGCTATGATGCAGTCCTCGGGGAGAATGCGGACATG
AGCGTGTGGGACTCCATGACGCGTCTCCATATTCCGATCTCCATCGAGGT
CTAGAAATTGAAACCGTTGACGGCCCCGTGTCTGAACAACAAATGCGCTG
TGGCCATCCCATTCTGATTCCATCTCGACAAGTTCGCATGTGCAACCCAC
TCTCGCTGTGCCTCGGCCGGACTCAAAACGCGCGTTGAGAATGCCGAGAA
AGGCTGCTTGACCCCCTCGTTGTGCCGAAGCAATCGCGAGGACAAGACGG
ATGTGGTGAAGTTTCCAGAGTCGTAATGGCAACGTCTCACCCGGAAAAAG
CACGACTTGGGGCAGAATCAGCAGGGGAAGTTCCATCACAGTGTTAGCAG
GGAGTAAGTGAGCCCGCGTCAGGCTCTCCATTCTGCAGCGTCCGATGGGA
CTCACAGTGTATAACGTTCTTCAGGTGTGTTCAGCAGCAACGTGAATGGG
CTGTCCTTGCATCCTGTGTTGAGATAGCCAGCATCTCTGGTGCATGCAGG
GAGATGGATTCGATGAGAAAGTGATCCCGTTGCTTCGGGTTTTTGGGGAA
GGGTTGGTTGCTGTGTCGGGGGGAGGTTGGAGAGTTATGAGTTATGCCGA
TGTCCTCGAGGCGACCAAACGCATGCTAGGATTTCACGTCCAGCCCTAAG
GAATCCCAGTACTTTTGGGGGGGGCATTCGTTTTCTTCGCCTCAGGTAGC
GTCTGCCCGCAAAGACGGCAGCCAACTGGAGCGTACCCGGCCCGTTGCGC
TCGATTCTCCCACACCGCTCTCGCTCACATTCTGATATAAATAAATATAT
ATATATATTTATATACCCACAATATGTACACAGGAGTGTAGGAGAGCGTC
CTCTTCTAGGGTTAAGTGCATGTGGAGGACAGGGCTTGGCATTTTGATGT
TTTGGGCCCGCTTTTCCAAGGCCTCCTTCATTGCCTCACCGTACACTGTC
GACAGCATCAAAGCTATGGCCTCCCGCCGCACTCCGCTTGGCATCGCGCA
CACCTTCAGCGGCTTGGGGCTGGACCGCAGCCGCGTGGAGACGGAGCTGA
AAGAGGTGGCGGCCTTTGAAAGTGCACTGAAAACCGATGGCGCGGgtacg
tggttaaggacgagaggtcggcagagccggtgtgtgggttgtactagcgc
acactttattctacgcataccgcctttctagcccgacagcacaccgataa
acaaatccattttaatctgaagctgataggcacacaaaatcgaaagccca
ccaatcgtccgcatcatccacgttttatgcctccccatctccgtttccct
tccttccgcagCCTTTGCCTTGTTCCACGGAACGTCAGCCCTAATCACGA
AAGAGAGACAAACCAAGATTGTCTATCAGACTGGCGACATGCTCCAAAAG
CTTTATGGAATTTCCATCGAACAACTGCAGCCAACCAACAAAAGCAGCAG
ACTAACCACCAGCGGTAATAGCTCTTCTGCACCATACTTTCCGTGTGTCG
CGCTCGGTGCATCCGTGAGCGGATGGGCTTTCGCCGTAGATGTCTCCAAG
CGATCCAAAGAGGATGTGGAGAGCAAGGCAGAGGCAGCTGGAGAAGTCGC
CGTCCAGTTTGAACCCGTACGGGCGCTGTTAGCAGTCCTCACGGAAGAGG
ACATTGCAGTGGCAGGGCTGGGTGCGTCTATTTTGGCCTGGCACCGTCAG
CACCAGCACTGTGGAGTGTGTGGCAGTCCAATGATAGCGGTGGAAGGAGG
AGGGCGTCGCGCCTGTACAAGCTGCCGAAATCGCGCGTATCCGCGCGTTG
ATCCCGTCGTAATTGCTTTGGTGACGGACCCTGCGAGGGATATGGTGTTG
TTAGGACGTCAGAGAGTGTATCGGCCCGGGATGTTCTCATGTTTAGCTGG
GTACGTGAGTCAGTGCGAAAGCTTGGAGGAGGCTGTACGAAGAGAGGTAA
AGGAAGAATCAGGAATCAGCGTGGGGGATGTAATGTATCACAGCTCGCAG
CCCTGGCCGATTGGGCGGGGGGCGTCGTGTCAGATAATGGTGGGCTATAT
CGCGACTGCTACCAGTATGGATATCTCCATGGACACGGACGAACTGGAGG
ATTGCCGGTGGTTTTCTCGGGCCGAAGTGGCGGGCGCAAAGGAGCTGGTT
GTGTCCGCAGCGTTGGACCCAACGGGGGAAAACCCGGGTGGGTTGAGTAT
TCCTGGGCCTTACGCGATAGCGCATCATTTGATCAAGCACTGGCTGTTGA
CGACGACGCCGCAAGAAGCGTCAGGAGGACGTAATAAATTATGAAAAATG
TATTTGGGCCGAGG
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protein sequence of NO13G02450.1

>NO13G02450.1-protein ID=NO13G02450.1-protein|Name=NO13G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=403bp
MWRTGLGILMFWARFSKASFIASPYTVDSIKAMASRRTPLGIAHTFSGLG
LDRSRVETELKEVAAFESALKTDGAAFALFHGTSALITKERQTKIVYQTG
DMLQKLYGISIEQLQPTNKSSRLTTSGNSSSAPYFPCVALGASVSGWAFA
VDVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEEDIAVAGLGASIL
AWHRQHQHCGVCGSPMIAVEGGGRRACTSCRNRAYPRVDPVVIALVTDPA
RDMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVM
YHSSQPWPIGRGASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAG
AKELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRN
KL*
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Synonyms
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