NO13G02370, NO13G02370 (gene) Nannochloropsis oceanica

Overview
NameNO13G02370
Unique NameNO13G02370
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1311
Alignment locationchr13:656726..658036 -

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial biogenesis protein AIM24
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:656726..658036 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016031Trp_RNA-bd_attenuator-like_dom
IPR002838AIM24
Homology
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: EWM21900.1 (Mitochondrial biogenesis protein AIM24, partial [Nannochloropsis gaditana])

HSP 1 Score: 480.7 bits (1236), Expect = 4.800e-132
Identity = 244/316 (77.22%), Postives = 276/316 (87.34%), Query Frame = 0 
Query:    1 MLVPAMRHSGGRGIISLTRSRLSAQRILTQLVTPKPASRAPEAFLGGVVIARRSIFNGLSGADKDKALLAKKQDEELALAKPIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADYGGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRGG 317
            MLV A+  +G RG     R+  +   ++T+ V  +PAS +     G    A RSIF+ LSGAD+ +AL  K+ +++ ALAKPIDFDV+SR+EGAETQIV+VDLEPGQ+LRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGE+MFISDFKYHG EG++GTVALGTEFPSK+IRVTLADYGG+LICQKGAFLCGTHLTGMEMEFT+SFK GFFGGEGFVLQRLTG GDAFIKAGGALIRREL+EGETLRVTSG+LV FAPSV YDV+M+KGVKNVMFGGEGLF+T+LTGPG VFLQSMPFDRVVASIASRVPRGG
Sbjct:    1 MLVRALLRTGNRGTHCAQRAHGTGHPLITRCVIRRPASPSLAMLAGPAGCASRSIFSMLSGADRTRALAKKEAEDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRGG 316
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: ETI39757.1 (hypothetical protein F443_14679 [Phytophthora parasitica P1569] >ETK79935.1 hypothetical protein L915_14300 [Phytophthora parasitica] >ETL33321.1 hypothetical protein L916_14205 [Phytophthora parasitica] >ETM39770.1 hypothetical protein L914_14123 [Phytophthora parasitica] >ETO68498.1 hypothetical protein F444_14685 [Phytophthora parasitica P1976] >ETP09664.1 hypothetical protein F441_14539 [Phytophthora parasitica CJ01A1] >KUF84788.1 hypothetical protein AM587_10007959 [Phytophthora nicotianae] >KUF91837.1 hypothetical protein AM587_10011490 [Phytophthora nicotianae])

HSP 1 Score: 313.9 bits (803), Expect = 7.700e-82
Identity = 147/236 (62.29%), Postives = 186/236 (78.81%), Query Frame = 0 
Query:   82 PIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADY-GGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRGG 317
            PIDFD +  IEG ++Q+V ++LEP Q LRAETG+++YMTDGVE+ET+  GG   G+KR MTGE+ F+S F YHG E   G VALGT FPSK++ + L+D+ GG++ICQKGAFLCG+    +EMEF K F  GFFGGEGF+LQRLTG GD  ++A G LI REL  GE LR++SG LVAF PSV YD+ MMKG KNV+FGGEGLF+T+LTGPG ++LQS+PF+RVV  +A+R+PRGG
Sbjct:  103 PIDFDTAVSIEGHDSQVVHIELEPNQCLRAETGAMIYMTDGVEMETTTAGGFGEGMKRMMTGENFFVSRFTYHGSE--KGKVALGTSFPSKIVHLRLSDFLGGSIICQKGAFLCGSDTVNIEMEFAKKFSVGFFGGEGFILQRLTGSGDVLVRATGTLIERELQPGEILRISSGCLVAFEPSVHYDITMMKGAKNVLFGGEGLFVTTLTGPGKIYLQSLPFERVVGEMAARIPRGG 336
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: ETL86605.1 (hypothetical protein L917_13997 [Phytophthora parasitica] >ETP37731.1 hypothetical protein F442_14499 [Phytophthora parasitica P10297])

HSP 1 Score: 313.9 bits (803), Expect = 7.700e-82
Identity = 147/236 (62.29%), Postives = 186/236 (78.81%), Query Frame = 0 
Query:   82 PIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADY-GGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRGG 317
            PIDFD +  IEG ++Q+V ++LEP Q LRAETG+++YMTDGVE+ET+  GG   G+KR MTGE+ F+S F YHG E   G VALGT FPSK++ + L+D+ GG++ICQKGAFLCG+    +EMEF K F  GFFGGEGF+LQRLTG GD  ++A G LI REL  GE LR++SG LVAF PSV YD+ MMKG KNV+FGGEGLF+T+LTGPG ++LQS+PF+RVV  +A+R+PRGG
Sbjct:  103 PIDFDTAVSIEGHDSQVVHIELEPNQCLRAETGAMIYMTDGVEMETTTAGGFGEGMKRMMTGENFFVSRFTYHGSE--KGKVALGTSFPSKIVHLRLSDFLGGSIICQKGAFLCGSDTVNIEMEFAKKFSVGFFGGEGFILQRLTGSGDVLVRATGTLIERELQPGEILRISSGCLVAFEPSVHYDITMMKGAKNVLFGGEGLFVTTLTGPGKIYLQSLPFERVVGEMAARIPRGG 336
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: GAX28028.1 (hypothetical protein FisN_2Hh154 [Fistulifera solaris])

HSP 1 Score: 313.5 bits (802), Expect = 1.000e-81
Identity = 146/240 (60.83%), Postives = 192/240 (80.00%), Query Frame = 0 
Query:   79 LAKPIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADYGGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRGGGL 319
            + +PIDFD++++IEG E+QIV ++L P Q+LRAE+G+++Y+T+GVE+ T+ GGGLSAG +R MTG++ FISD+ Y G   T G VALGT+FPSK++R+ + +YGG L+CQKGA LC +H   ++MEFTKSF +GFFGGEGF+LQ LTGQGD F+KAGG LIRR+L +GE LR++SG LVAF   V YDVQM+KG  NV  GGEGLF+T+L GPGTV+LQ  P  R+++ IA RVP GGGL
Sbjct:   42 VGEPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYSG--NTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQMEFTKSFASGFFGGEGFILQALTGQGDVFLKAGGTLIRRDLRDGEELRISSGCLVAFTSQVDYDVQMVKGFANVFAGGEGLFITTLKGPGTVWLQGQPPQRMISEIARRVPAGGGL 279
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: XP_008910380.1 (hypothetical protein PPTG_15112 [Phytophthora parasitica INRA-310] >ETN04453.1 hypothetical protein PPTG_15112 [Phytophthora parasitica INRA-310])

HSP 1 Score: 311.2 bits (796), Expect = 5.000e-81
Identity = 146/235 (62.13%), Postives = 185/235 (78.72%), Query Frame = 0 
Query:   83 IDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADY-GGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRGG 317
            IDFD +  IEG ++Q+V ++LEP Q LRAETG+++YMTDGVE+ET+  GG   G+KR MTGE+ F+S F YHG E   G VALGT FPSK++ + L+D+ GG++ICQKGAFLCG+    +EMEF K F  GFFGGEGF+LQRLTG GD  ++A G LI REL  GE LR++SG LVAF PSV YD+ MMKG KNV+FGGEGLF+T+LTGPG ++LQS+PF+RVV  +A+R+PRGG
Sbjct:  104 IDFDTAVSIEGHDSQVVHIELEPNQCLRAETGAMIYMTDGVEMETTTAGGFGEGMKRMMTGENFFVSRFTYHGSE--KGKVALGTSFPSKIVHLRLSDFLGGSIICQKGAFLCGSDTVNIEMEFAKKFSVGFFGGEGFILQRLTGSGDVLVRATGTLIERELQPGEILRISSGCLVAFEPSVHYDITMMKGAKNVLFGGEGLFVTTLTGPGKIYLQSLPFERVVGEMAARIPRGG 336
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: GAX24882.1 (hypothetical protein FisN_2Lh154 [Fistulifera solaris])

HSP 1 Score: 310.5 bits (794), Expect = 8.500e-81
Identity = 144/240 (60.00%), Postives = 191/240 (79.58%), Query Frame = 0 
Query:   79 LAKPIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADYGGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRGGGL 319
            + +PIDFD++++IEG E+QIV ++L P Q+LRAE+G+++Y+T+GVE+ T+ GGGLSAG +R MTG++ FISD+ Y G   T G VALGT+FPSK++R+ + +YGG L+CQKGA LC +H   ++MEFTKSF +GFFGGEGF+LQ LTG+GD F+KAGG LIRR+L  GE LR++SG LVAF   + YDVQM+KG  NV  GGEGLF+T+L GPGTV+LQ  P  R+++ IA RVP GGGL
Sbjct:   44 VGEPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYTG--NTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQMEFTKSFTSGFFGGEGFILQALTGEGDVFLKAGGTLIRRDLRAGEELRISSGCLVAFTSQIDYDVQMVKGFANVFAGGEGLFITTLKGPGTVWLQGQPPQRMISEIARRVPAGGGL 281
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: XP_002292429.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90404.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 310.1 bits (793), Expect = 1.100e-80
Identity = 143/237 (60.34%), Postives = 187/237 (78.90%), Query Frame = 0 
Query:   82 PIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADYGGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRGGGL 319
            PIDFD++S IEG E+QIV + LEP Q+LRAE+G+++YMT GV +    GGG+SAG +R++TG+++FISD+ Y G  G  G VALG++FPSK++R++L +YGG +ICQKGA LC +H   +++EFTK F TGFFGGEGFVLQ LTG GD  +KAGG LIR++L EGE+LRV+SG LV F   V YDV M+ G KNV+FGGEGLF+T+L GPGTV+LQ MP  R+++ IA RVP GGG+
Sbjct:   74 PIDFDIASSIEGKESQIVTIRLEPNQVLRAESGAMMYMTSGVSMNXXXGGGMSAGFQRFLTGQNVFISDYTYDGSNGPFGFVALGSDFPSKIVRLSLDEYGGKVICQKGALLCASHTVDIQVEFTKKFSTGFFGGEGFVLQGLTGTGDVLVKAGGTLIRKDLKEGESLRVSSGCLVGFQQGVEYDVAMVPGFKNVLFGGEGLFLTTLKGPGTVWLQGMPPQRMISEIARRVPSGGGI 310
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: GAY04678.1 (Hypothetical protein PINS_012497 [Pythium insidiosum])

HSP 1 Score: 301.2 bits (770), Expect = 5.200e-78
Identity = 148/243 (60.91%), Postives = 190/243 (78.19%), Query Frame = 0 
Query:   74 DEELALAKPIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADY-GGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRG 316
            +EE  L+ PIDF  + RI+G ++QIV +DLEP Q LRAE+GS++YMT+GVE+ET+  GG +AGLKR +TGE+ F+S FKY GE  + GTVA+ T FPSK++ ++LAD+ GG LICQKGAFLCG+  T +EM  TK+F TGFFGGEGFVLQRLTG GD  ++A GALI R+LA  E LR++SG LVAF P+V +D+    GVKNV+F GEGLF+T+LTGPG V+LQS+P+DRVV  IA  +P G
Sbjct:    7 EEEHELSVPIDFKKAMRIDGHDSQIVHIDLEPHQCLRAESGSMIYMTEGVEMETTTAGGFAAGLKRVVTGENFFVSRFKYTGE--SKGTVAVSTSFPSKILHLSLADFIGGELICQKGAFLCGSDTTRIEMYVTKNFSTGFFGGEGFVLQRLTGSGDVCLRASGALIERDLAPNEVLRISSGCLVAFEPTVGFDITRQAGVKNVLFSGEGLFLTTLTGPGKVYLQSLPYDRVVGEIARHIPGG 247
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: GAX93155.1 (Hypothetical protein PINS_001055 [Pythium insidiosum])

HSP 1 Score: 301.2 bits (770), Expect = 5.200e-78
Identity = 148/243 (60.91%), Postives = 190/243 (78.19%), Query Frame = 0 
Query:   74 DEELALAKPIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADY-GGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRG 316
            +EE  L+ PIDF  + RI+G ++QIV +DLEP Q LRAE+GS++YMT+GVE+ET+  GG +AGLKR +TGE+ F+S FKY GE  + GTVA+ T FPSK++ ++LAD+ GG LICQKGAFLCG+  T +EM  TK+F TGFFGGEGFVLQRLTG GD  ++A GALI R+LA  E LR++SG LVAF P+V +D+    GVKNV+F GEGLF+T+LTGPG V+LQS+P+DRVV  IA  +P G
Sbjct:   75 EEEHELSVPIDFKKAMRIDGHDSQIVHIDLEPHQCLRAESGSMIYMTEGVEMETTTAGGFAAGLKRVVTGENFFVSRFKYTGE--SXGTVAVSTSFPSKILHLSLADFIGGELICQKGAFLCGSDTTRIEMYVTKNFSTGFFGGEGFVLQRLTGSGDVCLRASGALIERDLAPNEVLRISSGCLVAFEPTVGFDITRQAGVKNVLFSGEGLFLTTLTGPGKVYLQSLPYDRVVGEIARHIPGG 315
[Close]
BLAST of NO13G02370 vs. NCBI_GenBank
Match: GAX93158.1 (Hypothetical protein PINS_001072, partial [Pythium insidiosum])

HSP 1 Score: 301.2 bits (770), Expect = 5.200e-78
Identity = 148/243 (60.91%), Postives = 190/243 (78.19%), Query Frame = 0 
Query:   74 DEELALAKPIDFDVSSRIEGAETQIVMVDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISDFKYHGEEGTAGTVALGTEFPSKVIRVTLADY-GGALICQKGAFLCGTHLTGMEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLRVTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMPFDRVVASIASRVPRG 316
            +EE  L+ PIDF  + RI+G ++QIV +DLEP Q LRAE+GS++YMT+GVE+ET+  GG +AGLKR +TGE+ F+S FKY GE  + GTVA+ T FPSK++ ++LAD+ GG LICQKGAFLCG+  T +EM  TK+F TGFFGGEGFVLQRLTG GD  ++A GALI R+LA  E LR++SG LVAF P+V +D+    GVKNV+F GEGLF+T+LTGPG V+LQS+P+DRVV  IA  +P G
Sbjct:  102 EEEHELSVPIDFKKAMRIDGHDSQIVHIDLEPHQCLRAESGSMIYMTEGVEMETTTAGGFAAGLKRVVTGENFFVSRFKYTGE--SRGTVAVSTSFPSKILHLSLADFIGGELICQKGAFLCGSDTTRIEMYVTKNFSTGFFGGEGFVLQRLTGSGDVCLRASGALIERDLAPNEVLRISSGCLVAFEPTVGFDITRQAGVKNVLFSGEGLFLTTLTGPGKVYLQSLPYDRVVGEIARHIPGG 342
The following BLAST results are available for this feature:
BLAST of NO13G02370 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21900.14.800e-13277.22Mitochondrial biogenesis protein AIM24, partial [N... [more]
ETI39757.17.700e-8262.29hypothetical protein F443_14679 [Phytophthora para... [more]
ETL86605.17.700e-8262.29hypothetical protein L917_13997 [Phytophthora para... [more]
GAX28028.11.000e-8160.83hypothetical protein FisN_2Hh154 [Fistulifera sola... [more]
XP_008910380.15.000e-8162.13hypothetical protein PPTG_15112 [Phytophthora para... [more]
GAX24882.18.500e-8160.00hypothetical protein FisN_2Lh154 [Fistulifera sola... [more]
XP_002292429.11.100e-8060.34predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAY04678.15.200e-7860.91Hypothetical protein PINS_012497 [Pythium insidios... [more]
GAX93155.15.200e-7860.91Hypothetical protein PINS_001055 [Pythium insidios... [more]
GAX93158.15.200e-7860.91Hypothetical protein PINS_001072, partial [Pythium... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL135nonsL135Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR071ngnoR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001657NSK001657Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G02370.1NO13G02370.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|112329gene_6775Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100070g30gene8535Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G02370.1NO13G02370.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G02370 ID=NO13G02370|Name=NO13G02370|organism=Nannochloropsis oceanica|type=gene|length=1311bp
ATGCTGGTCCCCGCGATGCGCCACAGTGGTGGCCGCGGCATAATCTCTTT
AACACGTAGTCGCCTCTCCGCTCAACGAATTCTTACGCAACTGGTGACCC
CAAAACCAGCTTCCAGAGCGCCGGAGGCTTTCCTAGGGGGCGTCGTCATC
GCACGTCGGAGCATCTTCAATGGCCTGAGCGGGGCAGACAAGGATAAGGC
TCTGCTGGCAAAGAAGCAAGATGAGGAGTTAGCGTTGGCCAAACCAATCG
ATTTTGACGTGTCCTCTCGGATCGAAGGCGCCGAGACGCAGATAGTCATG
GTCGACCTCGAACCCGGGCAGATTTTGAGAGCAGAAACGGGCTCGTTGTT
GTACATGACAGACGGTGTAGAGTTGGAGACTTCTCTTGGCGGGGGGCTGT
CGGCAGGACTTAAACGATACATGACTGGTGAAAGCATGTTCATCTCCGAC
TTCAAATACCATGGGGAGGAGGGCACCGCGGGTACGGTGGCGCTAGGTAC
GGAATTCCCTAGTAAGGTGATCCGAGTCACACTGGCTGATTACGGCGGCG
CGCTCATTTGTCAAAAGGGTGCATTTTTGTGTGGGACACATTTGACTGGG
ATGGAGATGGAGTTCACAAAAAGCTTCAAGACTGGGTTCTTCGGTGGGGA
AGGTTTTGTGTTGCAGCGGCTGACAGGGCAAGGCGACGCGTTTATCAAGG
CCGGAGGCGCTCTGATTCGACGGGAGCTGGCCGAGGGAGAGACGTTGCGG
GTTACCTCCGGAGCGCTTGTAGCATTCGCTCCTAGCGTGAGTTACGACGT
CCAAATGATGAAGGGCGTGAAGAATGTGATGTTTGGGGGTGAGGGTTTGT
TTATGACTTCGCTTACGGGGCCGGGCACTGTTTTCTTGCAGAGCATGCCT
TTTGACCGTGTGGTCGCTTCCATCGCTTCCAGGGTTCCGCGCGGAGGAGG
ACTGGGGATGGGCGTTCCGATTGGTATGGGGGCTGGGGGAGCAGGCGCTG
GCGACGAAGGGGGAGAGGATGGTGAGGGAGGGGAGGAAGGGGATGATAGT
GGGATGGGCTCCACATCGTCCTCGTCTTCTGCGGCAGCGGGAGAGGGATT
TGGGGGGACTAACACGGGGGGGAGTAGTAGTAGTAGTGGCAGTGAGGCAC
CAGGCGAGCAAGGTGGGGAAGAAGTGTGGGGAGAAGAGAAGGGGGAGGAG
GCGGGCGAGATGCCGGAGGAAGTAGGGGAGGAAGCGCAGGAAGCGTTTGC
GGATTCGGGCGTTCGTGAGGTCCTTAATGATATTTGGAGCACTGTCTGGG
GGGACAGATAA
back to top

protein sequence of NO13G02370.1

>NO13G02370.1-protein ID=NO13G02370.1-protein|Name=NO13G02370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=437bp
MLVPAMRHSGGRGIISLTRSRLSAQRILTQLVTPKPASRAPEAFLGGVVI
ARRSIFNGLSGADKDKALLAKKQDEELALAKPIDFDVSSRIEGAETQIVM
VDLEPGQILRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGESMFISD
FKYHGEEGTAGTVALGTEFPSKVIRVTLADYGGALICQKGAFLCGTHLTG
MEMEFTKSFKTGFFGGEGFVLQRLTGQGDAFIKAGGALIRRELAEGETLR
VTSGALVAFAPSVSYDVQMMKGVKNVMFGGEGLFMTSLTGPGTVFLQSMP
FDRVVASIASRVPRGGGLGMGVPIGMGAGGAGAGDEGGEDGEGGEEGDDS
GMGSTSSSSSAAAGEGFGGTNTGGSSSSSGSEAPGEQGGEEVWGEEKGEE
AGEMPEEVGEEAQEAFADSGVREVLNDIWSTVWGDR*
back to top
Synonyms
Publications