NO13G01990, NO13G01990 (gene) Nannochloropsis oceanica

Overview
NameNO13G01990
Unique NameNO13G01990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1470
Alignment locationchr13:572382..573851 -

Link to JBrowse

Properties
Property NameValue
DescriptionGtp-binding protein obg
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:572382..573851 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR036726GTP1_OBG_dom_sf
IPR027417P-loop_NTPase
IPR031167G_OBG
IPR006169GTP1_OBG_dom
IPR006073GTP_binding_domain
Homology
BLAST of NO13G01990 vs. NCBI_GenBank
Match: EWM21863.1 (gtp-binding protein obg [Nannochloropsis gaditana])

HSP 1 Score: 514.6 bits (1324), Expect = 3.300e-142
Identity = 288/485 (59.38%), Postives = 334/485 (68.87%), Query Frame = 0
Query:    1 MDRHHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNYYERVQVCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNFRAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKADLNSDWVQEAKSAVEAVLREDEVEVDARKDAGDVEGVMTRDWKVPPILWGSACTGERIGELAHELRRAVELVALEEENVRGINGPGSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHLPQMGEIMVAVG---TTEETASLQRVEED-AAYAEGMCIAHAYSKALEESQARNTEWISGIQGVSAAVIRARRYAAGLAVTYRQNYWLTDAIHSAMQVQQPK 482
            MDRHHFHGK GG+GDS  + GARG H VVRVPCGT+VKEVLR       G  YERVQVCDLD+PLSYY AATGG+PGLGNS+QAGR R +++ASGNFR+PGHQGEER+YELELKTIADVGLVGYPNAGKSTLLGGLS A+P  AAY FTTLHPTVGRVEYTDAAS+TVADLPGLIEGAHANKGLGHEFLRHIERTKVL+YVLDG+G EG    AGV+DGSVVEEAP  V RKLK+ELELYCPGLSRRPSLVWLNKADLN++WV EAK+AV A +  D+   D  +  G  E  M +  +VP +L GSA TGE IGELAHELRR V+ VA                XXXXX                                 LP     +  VG   TT+   S    + D AA  + + +A AY+KALE +Q  N EW++ +Q  +  + RA+ Y+A L VTYRQ+YWL   +      +Q +
Sbjct:  312 MDRHHFHGKAGGSGDSNKKHGARGAHAVVRVPCGTVVKEVLR----SGRGGGYERVQVCDLDQPLSYYRAATGGRPGLGNSVQAGRARNSASASGNFRSPGHQGEERFYELELKTIADVGLVGYPNAGKSTLLGGLSRARPAAAAYAFTTLHPTVGRVEYTDAASVTVADLPGLIEGAHANKGLGHEFLRHIERTKVLVYVLDGVGREG---GAGVDDGSVVEEAPVTVFRKLKKELELYCPGLSRRPSLVWLNKADLNAEWVSEAKAAVMADMSGDDATADRPQAWG--ESTMGQRGRVPNVLSGSARTGEGIGELAHELRRVVDRVAQXXXXXXXXXXXXXXXXXXXXKLWARETGGSDHA--------------------LPHRQGGIEGVGGRNTTKSEGSFVTADVDSAADDKTISLAEAYAKALELTQRFNVEWMNAVQCANQNIHRAQCYSAALTVTYRQDYWLAHGMRMMKAGEQTR 767          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_005855655.1 (gtp-binding protein obg [Nannochloropsis gaditana CCMP526] >EKU20703.1 gtp-binding protein obg [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 491.9 bits (1265), Expect = 2.300e-135
Identity = 248/329 (75.38%), Postives = 275/329 (83.59%), Query Frame = 0
Query:    1 MDRHHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNYYERVQVCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNFRAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKADLNSDWVQEAKSAVEAVLREDEVEVDARKDAGDVEGVMTRDWKVPPILWGSACTGERIGELAHELRRAVELVA 330
            MDRHHFHGK GG+GDS  + GARG H VVRVPCGT+VKEVLR       G  YERVQVCDLD+PLSYY AATGG+PGLGNS+QAGR R +++ASGNFR+PGHQGEER+YELELKTIADVGLVGYPNAGKSTLLGGLS A+P  AAYPFTTLHPTVGRVEYTDAAS+TVADLPGLIEGAHANKGLGHEFLRHIERTKVL+YVLDG+G EG    AGV+DGSVVEEAP  V RKLK+ELELYCPGLSRRPSLVWLNKADLN++WV EAK+AV A +  D+   D  +  G  E  M +  +VP +L GSA TGE IGELAHELRR V+ VA
Sbjct:  241 MDRHHFHGKAGGSGDSNKKHGARGAHAVVRVPCGTVVKEVLR----SGRGGGYERVQVCDLDQPLSYYRAATGGRPGLGNSVQAGRARNSASASGNFRSPGHQGEERFYELELKTIADVGLVGYPNAGKSTLLGGLSRARPAAAAYPFTTLHPTVGRVEYTDAASVTVADLPGLIEGAHANKGLGHEFLRHIERTKVLVYVLDGVGREG---GAGVDDGSVVEEAPVTVFRKLKKELELYCPGLSRRPSLVWLNKADLNAEWVSEAKAAVMADMSGDDATADRPQAWG--ESTMGQRGRVPNVLSGSARTGEGIGELAHELRRVVDRVA 560          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_009515404.1 (hypothetical protein PHYSODRAFT_470774 [Phytophthora sojae] >EGZ28129.1 hypothetical protein PHYSODRAFT_470774 [Phytophthora sojae])

HSP 1 Score: 264.2 bits (674), Expect = 7.900e-67
Identity = 142/260 (54.62%), Postives = 166/260 (63.85%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNYY---ERVQVCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258
            HHF G  G  G   +  G RG+H VV+VPCGT+VK V R      NG Y    +   VCDLD+P + + AA GGKPGLGN I AG+  K      +    +  GH G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P++A YPFTTLHP VG VE+ D   L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D
Sbjct:  132 HHFKGGAGTNGMPNDAAGRRGKHCVVKVPCGTLVKRVERYERELENGEYEIVDQMETVCDLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPENKTTGHPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 377          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_008911618.1 (obg family GTPase CgtA [Phytophthora parasitica INRA-310] >ETI37585.1 obg family GTPase CgtA [Phytophthora parasitica P1569] >ETK77828.1 obg family GTPase CgtA [Phytophthora parasitica] >ETL84514.1 obg family GTPase CgtA [Phytophthora parasitica] >ETN03074.1 obg family GTPase CgtA [Phytophthora parasitica INRA-310] >ETP07450.1 obg family GTPase CgtA [Phytophthora parasitica CJ01A1] >ETP35525.1 obg family GTPase CgtA [Phytophthora parasitica P10297] >KUF91580.1 GTPase [Phytophthora nicotianae])

HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63
Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258
            HHF G  G  G   +  G RG+H  V+VPCGT+VK V R      +G Y   +R++ V DLD+P + + AA GGKPGLGN I AG+  K      +    +  G  G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P++A YPFTTLHP VG VE+ D   L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D
Sbjct:  157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: ETL31261.1 (obg family GTPase CgtA [Phytophthora parasitica])

HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63
Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258
            HHF G  G  G   +  G RG+H  V+VPCGT+VK V R      +G Y   +R++ V DLD+P + + AA GGKPGLGN I AG+  K      +    +  G  G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P++A YPFTTLHP VG VE+ D   L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D
Sbjct:  157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: ETM37697.1 (obg family GTPase CgtA [Phytophthora parasitica])

HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63
Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258
            HHF G  G  G   +  G RG+H  V+VPCGT+VK V R      +G Y   +R++ V DLD+P + + AA GGKPGLGN I AG+  K      +    +  G  G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P++A YPFTTLHP VG VE+ D   L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D
Sbjct:  157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_024585322.1 (obg family gtpase [Plasmopara halstedii] >CEG48953.1 obg family gtpase [Plasmopara halstedii])

HSP 1 Score: 253.8 bits (647), Expect = 1.100e-63
Identity = 147/289 (50.87%), Postives = 174/289 (60.21%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNFR-------APGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKADLNSDWVQEAKSAVEAVLREDEVEVD 283
            HHF G+ G  G   +  G RG++  V+VPCGT+VK V R       G Y   +R++ V DLD+P + + AA GGKPGLGN I AG+  K    SG  R         G  G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P +A YPFTTLHP VG VE+ D   L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D      Q    AV  V     V++D
Sbjct:  143 HHFKGESGTNGMPNDSAGKRGKYCYVKVPCGTLVKRVERYEREMDTGEYEVVDRMEVVADLDKPGTTFLAAKGGKPGLGNRILAGKTTK----SGRLRKLMPENKTRGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPAIAPYPFTTLHPYVGIVEFPDTYRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLVDFNHLQRELELYAPGISSRPSLIVANKMDEQGKLRQSTDLAVLPVSALHRVDID 413          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: OWZ23559.1 (Obg family GTPase [Phytophthora megakarya])

HSP 1 Score: 253.4 bits (646), Expect = 1.400e-63
Identity = 139/260 (53.46%), Postives = 166/260 (63.85%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258
            HHF G  G  G   +  G RG+H  V+VPCGT+VK V R      NG Y   +++Q V DLD+P + + AA GG+PGLGN I AG+  K      +    +  G  G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P++A YPFTTLHP VG VE+ D   L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D
Sbjct:  152 HHFKGGAGTNGMPNDAAGRRGKHCHVKVPCGTLVKRVERYERELENGEYEIVDQMQVVADLDKPGASFLAAKGGRPGLGNRILAGKTTKFGRLRKHMPENKTVGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTYRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 397          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: ETO66380.1 (obg family GTPase CgtA [Phytophthora parasitica P1976])

HSP 1 Score: 252.7 bits (644), Expect = 2.400e-63
Identity = 138/260 (53.08%), Postives = 166/260 (63.85%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258
            HHF G  G  G   +  G RG+H  V+VPCGT+VK V R      +G Y   ++++ V DLD+P + + AA GGKPGLGN I AG+  K      +    +  G  G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P++A YPFTTLHP VG VE+ D   L+VAD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D
Sbjct:  157 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDKMEVVADLDKPGATFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSVADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 402          
BLAST of NO13G01990 vs. NCBI_GenBank
Match: XP_002906367.1 (GTPase [Phytophthora infestans T30-4] >EEY65768.1 GTPase [Phytophthora infestans T30-4])

HSP 1 Score: 251.9 bits (642), Expect = 4.000e-63
Identity = 138/260 (53.08%), Postives = 165/260 (63.46%), Query Frame = 0
Query:    4 HHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNGNY--YERVQ-VCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNF---RAPGHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTTLHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLYVLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSLVWLNKAD 258
            HHF G  G  G   +  G RG+H  V+VPCGT+VK V R      +G Y   +R++ V DLD P + + AA GGKPGLGN I AG+  K      +    +  G  G  +YYELELKTIADVGLVGYPNAGKSTLL  LS A P++A YPFTTLHP VG VE+ D   L++AD+PGLI+GAH N GLGH+FLRHIERTK+L+YVLD  G EGR               P      L+ ELELY PG+S RPSL+  NK D
Sbjct:  132 HHFKGGAGTNGMPNDSAGRRGKHCHVKVPCGTLVKRVERYERELEDGEYEIVDRMEVVADLDTPGAAFLAAKGGKPGLGNRILAGKTTKFGRLRKHMPESKTTGSPGTSQYYELELKTIADVGLVGYPNAGKSTLLSVLSRATPEIAPYPFTTLHPYVGIVEFPDTFRLSMADIPGLIDGAHRNVGLGHDFLRHIERTKILMYVLDTAGSEGRD--------------PLEDFTHLQRELELYAPGISSRPSLIVANKMD 377          
The following BLAST results are available for this feature:
BLAST of NO13G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21863.13.300e-14259.38gtp-binding protein obg [Nannochloropsis gaditana][more]
XP_005855655.12.300e-13575.38gtp-binding protein obg [Nannochloropsis gaditana ... [more]
XP_009515404.17.900e-6754.62hypothetical protein PHYSODRAFT_470774 [Phytophtho... [more]
XP_008911618.11.100e-6353.46obg family GTPase CgtA [Phytophthora parasitica IN... [more]
ETL31261.11.100e-6353.46obg family GTPase CgtA [Phytophthora parasitica][more]
ETM37697.11.100e-6353.46obg family GTPase CgtA [Phytophthora parasitica][more]
XP_024585322.11.100e-6350.87obg family gtpase [Plasmopara halstedii] >CEG48953... [more]
OWZ23559.11.400e-6353.46Obg family GTPase [Phytophthora megakarya][more]
ETO66380.12.400e-6353.08obg family GTPase CgtA [Phytophthora parasitica P1... [more]
XP_002906367.14.000e-6353.08GTPase [Phytophthora infestans T30-4] >EEY65768.1 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001695NSK001695Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01990.1NO13G01990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|567389gene_6809Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100169g10gene8570Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01990.1NO13G01990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01990 ID=NO13G01990|Name=NO13G01990|organism=Nannochloropsis oceanica|type=gene|length=1470bp
ATGGACCGCCATCACTTTCATGGCAAGCCTGGAGGGACGGGCGATTCCAA
GAACCAGCGCGGGGCCCGTGGTCGACACACGGTGGTGCGTGTACCGTGTG
GGACGATTGTCAAGGAGGTCTTGCGGCGCTGTGCCAATGGGTGCAATGGC
AACTATTATGAGCGCGTCCAAGTATGCGATCTGGACGAACCCCTCAGCTA
TTACACGGCGGCCACGGGCGGAAAGCCAGGGCTAGGCAACTCAATACAGG
CAGGGCGCGTGCGCAAAACCTCAGCGGCTTCGGGGAATTTCCGCGCGCCC
GGACATCAGGGCGAAGAGCGCTATTATGAACTGGAGCTCAAGACGATTGC
CGACGTGGGGTTGGTTGGCTATCCGAATGCAGGAAAGTCGACGCTGCTGG
GGGGACTCTCGATGGCGCAGCCTAAAGTGGCGGCTTACCCTTTCACGACG
CTCCACCCGACGGTTGGTCGCGTGGAGTACACGGATGCGGCGAGTCTGAC
AGTGGCAGATTTACCCGGATTGATTGAAGGGGCGCATGCCAATAAAGGGT
TGGGGCATGAGTTTTTACGACACATTGAGCGAACTAAAGTGTTGTTGTAT
GTGCTTGATGGGATAGGTGGGGAAGGACGAGGGGTAGCGGCAGGGGTGGA
GGACGGGAGTGTCGTGGAGGAGGCACCGGCCCATGTCTTGCGGAAATTGA
AAGAGGAGCTGGAGCTGTATTGTCCAGGGTTATCGCGGCGTCCGTCGTTG
GTTTGGCTTAACAAAGCGGATCTGAACTCTGATTGGGTGCAAGAGGCCAA
ATCAGCCGTGGAGGCTGTGCTGAGAGAAGACGAAGTGGAAGTAGATGCTC
GCAAAGACGCAGGTGACGTAGAAGGGGTCATGACTCGGGATTGGAAAGTA
CCACCTATTTTGTGGGGGAGTGCCTGCACTGGGGAACGCATTGGCGAGTT
AGCACATGAGCTAAGGCGAGCGGTGGAACTTGTCGCACTTGAAGAGGAAA
ATGTAAGAGGGATCAATGGCCCGGGAAGCAATTGTAGTGGTAGTGGTAGT
GGTAGTGATGGTGGAAGCCGTGCGACAAAAGGCTCGGGTGATAATGGTAA
TCATTATCGGCAGCAGCTGAGGCACGAGCAGCAGCAACAGCAACTACATC
TGCCGCAGATGGGTGAGATCATGGTAGCGGTAGGTACCACAGAGGAAACT
GCATCACTTCAAAGAGTGGAAGAGGATGCTGCTTACGCCGAGGGGATGTG
CATCGCACATGCTTATTCCAAGGCCTTGGAAGAGTCTCAAGCACGCAACA
CTGAGTGGATTTCAGGAATTCAGGGTGTCAGCGCAGCTGTCATTCGCGCT
CGGCGCTACGCCGCGGGCCTTGCTGTCACATATCGCCAGAACTACTGGCT
CACGGATGCGATTCACTCCGCCATGCAGGTGCAGCAGCCGAAAGGCGGCA
CCGGTGAGCCGACGAAATGA
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protein sequence of NO13G01990.1

>NO13G01990.1-protein ID=NO13G01990.1-protein|Name=NO13G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=490bp
MDRHHFHGKPGGTGDSKNQRGARGRHTVVRVPCGTIVKEVLRRCANGCNG
NYYERVQVCDLDEPLSYYTAATGGKPGLGNSIQAGRVRKTSAASGNFRAP
GHQGEERYYELELKTIADVGLVGYPNAGKSTLLGGLSMAQPKVAAYPFTT
LHPTVGRVEYTDAASLTVADLPGLIEGAHANKGLGHEFLRHIERTKVLLY
VLDGIGGEGRGVAAGVEDGSVVEEAPAHVLRKLKEELELYCPGLSRRPSL
VWLNKADLNSDWVQEAKSAVEAVLREDEVEVDARKDAGDVEGVMTRDWKV
PPILWGSACTGERIGELAHELRRAVELVALEEENVRGINGPGSNCSGSGS
GSDGGSRATKGSGDNGNHYRQQLRHEQQQQQLHLPQMGEIMVAVGTTEET
ASLQRVEEDAAYAEGMCIAHAYSKALEESQARNTEWISGIQGVSAAVIRA
RRYAAGLAVTYRQNYWLTDAIHSAMQVQQPKGGTGEPTK*
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Synonyms
Publications