NO13G01570, NO13G01570 (gene) Nannochloropsis oceanica

Overview
NameNO13G01570
Unique NameNO13G01570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1537
Alignment locationchr13:465982..467518 +

Link to JBrowse

Properties
Property NameValue
DescriptionRibosomal protein l11 methyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:465982..467518 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
BLAST of NO13G01570 vs. NCBI_GenBank
Match: EWM21834.1 (ribosomal protein l11 methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 553.9 bits (1426), Expect = 4.600e-154
Identity = 292/447 (65.32%), Postives = 337/447 (75.39%), Query Frame = 0
Query:   13 LLAITSTHAFLLPHLHTSSC-LRLHHSKQPTRRLSL-----RSISTPPLHGSSSADEEADVATLQANEGWVEPWAGTESSDLVRIVFDCYEKDKMVIDPWLLSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEE--KKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALA----GGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKL-GGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTRNNEPVV 447
            LL +T  H F  P+  T+   +R   ++  +  L L         +  L G S  ++EA  AT+QAN  W EPW G ES+DLVRI+FDCYEKD+M+IDPWLLSELLLETGAYSSQIEDAAKDT+DETPIFGEHGEPACSEKIWNRSLVMADYGL+VDVG VL+L+K AF+L  +YP++YRLERI+DRDWQKEVQE WKP+LLGDRL+VKFTWH EED+   L S    + +KV+ LEGGAAFGSGEHPTT MCCAWLQ  L   +      GG  +SVCDYGAGSGILA+AAL+FGA TA GVEID FAIQSAYRNA MNGL+  F+ PVE +  G + G     + +V+P G+  EE+    EEV IAPTDVMLANILKRPLIELSKQIS LTKL GGKV LAGLL EQAE VM AYR YFPDI  A+  GEW LLVGTRN+ PVV
Sbjct:   41 LLTMTCAHGFTRPYFRTTRIDIRRARNEPQSAPLPLSCGCVHLSRSKRLQGHSFKEDEAS-ATIQANNEWTEPWTGAESNDLVRIIFDCYEKDRMLIDPWLLSELLLETGAYSSQIEDAAKDTRDETPIFGEHGEPACSEKIWNRSLVMADYGLDVDVGSVLSLIKEAFQLGASYPVRYRLERIVDRDWQKEVQESWKPLLLGDRLLVKFTWHEEEDVKALLASRTAVEDVKVLALEGGAAFGSGEHPTTVMCCAWLQSHLAAESAKAGTDGGEGLSVCDYGAGSGILAMAALLFGAGTAFGVEIDVFAIQSAYRNAEMNGLQMAFVQPVETRTEGTEGGIACVTYQLVQPDGSVDEED----EEVQIAPTDVMLANILKRPLIELSKQISSLTKLEGGKVALAGLLEEQAEDVMAAYRPYFPDIAPADQEGEWVLLVGTRNDVPVV 482          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: CBN79469.1 (ribosomal protein L11 methyltransferase [Ectocarpus siliculosus])

HSP 1 Score: 235.3 bits (599), Expect = 3.600e-58
Identity = 178/463 (38.44%), Postives = 238/463 (51.40%), Query Frame = 0
Query:    8 ALLLLLLAITST----HAFLLPHLHTS-SCLRLHHSKQPTRRLSLRSISTPPLHGSSSADEEADVATLQA--NEGWVEPWAGTESSDLVRIVFDCYEKDKMVIDPWLLSELLLETGAYSSQIEDAAKDTKDETPIFGEHGE----------PACS--EKIW-NRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKV-MTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEV---------NIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            A L+  L + ST    HA  LP   +S SC        PT  +        PL   ++AD + + A  Q+  +E W E     +S ++      C +     +DPW LSELL++ GA S  ++DA   T  E P+  EH            P+ S  + +W   S V+A +  E D+ GV+A V+   EL    PL ++++ ++D+DW K VQEGW PI +G RL ++F WH      P   SE K  +V + LEGG +FG+GEHPTT MCC WL++      +AG R   V DYG+GSGIL LAAL FGA  AVGVE+D  AI SA  NAA NGL+     P E   G   D     K  V   A  E  E+ ME   V          +   DV +ANIL  P+I L    + LT+ GGK+ L+G+L EQA +V+ AY   F D+    SMG W LL G R
Sbjct:   13 AFLVSSLILPSTPFVNHAHQLPSRSSSRSCAMNRRRPSPTTAI------PRPLPSLATADADVNAAGQQSAVDELWWEEGGAVQSLEIA-----CRDAKGSELDPWFLSELLMDVGAMSVSVDDADLGTGAEVPLLHEHTNSKAFDPSVPLPSVSGRKDMWGGSSRVVALFPREWDLAGVVATVEEVLELAS--PLSFKVDDVVDKDWVKTVQEGWDPIEVG-RLRIRFPWH-----TPLPPSELKPGQVELELEGGRSFGTGEHPTTSMCCTWLED-----NVAGQR---VLDYGSGSGILGLAALSFGAVEAVGVELDLSAIASAAVNAANNGLKMDTYYPQEVGTGDGLD-LVLTKLAVSEKATEEPSEDAMEPPSVADGFPISTEELGAFDVTVANILAGPIIRLQPVFAYLTRPGGKLALSGVLQEQAGAVLSAYAESF-DLEVTESMGGWVLLSGVR 446          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: XP_005835360.1 (hypothetical protein GUITHDRAFT_105987 [Guillardia theta CCMP2712] >EKX48380.1 hypothetical protein GUITHDRAFT_105987 [Guillardia theta CCMP2712])

HSP 1 Score: 214.2 bits (544), Expect = 8.600e-52
Identity = 133/345 (38.55%), Postives = 201/345 (58.26%), Query Frame = 0
Query:   97 EKDKMVIDPWLLSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETV-FLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            +++   ID   LSELL+ETGA S  +EDA + T+ E PIF    EP  +E+ WN   V A Y    D+  VL +V  + +L    P +Y ++ + D+DW K VQ+ WKPIL+ D L+++F WH++ED+   +L + +  ++M LEGG AFG+GEHPTT +CC WLQ+ L   AL  G+ V V DYGAGSG+L L +L FGA  AV       +I +A+ NA +NG+E+    LP       +   D R    + + +G     + +E    +    DV+++NIL  PLI L+ +++ L++  G + L+G+L EQAE V+EAY  ++  + +      W L+ G R
Sbjct:  100 DENGRTIDADELSELLMETGALSVIVEDADRGTEQELPIF---NEPGRAERYWNNCNVTAFYPHGWDIPAVLEMVVKSMDL-PVVP-RYAVDEVRDQDWVKLVQQSWKPILI-DHLLLRFPWHSKEDIDSVVLQDSEIHELM-LEGGMAFGTGEHPTTRLCCRWLQQKL---ALEHGQRVRVMDYGAGSGVLGLTSLRFGAEAAVD------SIVAAHSNARLNGMESFKVYLPSSTAKDAELIEDLRYAAQLRQLSGMLSWNDMLETLPDDCHGYDVVVSNILAGPLIRLAPELARLSRAQGLLGLSGILHEQAERVIEAYEPFYEQLREDQG---WVLITGKR 425          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: WP_072768155.1 (50S ribosomal protein L11 methyltransferase [Nitrosospira sp. Nsp11] >SHL94075.1 [LSU ribosomal protein L11P]-lysine N-methyltransferase [Nitrosospira sp. Nsp11])

HSP 1 Score: 192.6 bits (488), Expect = 2.700e-45
Identity = 128/338 (37.87%), Postives = 171/338 (50.59%), Query Frame = 0
Query:  108 LSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGG-VLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETV----FLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            L + LLE GA S+ I DAA  T  E  +F E GEP  SEKIW  S + A +  +VD+   V A   AA   C      YR+ R+ ++DW +  Q  + PI +  RL +  +WH   D A   L          L+ G AFG+G HP+T +C  WL E      L GG +  V DYG GSGILA+AAL  GA   VG++IDP A+ ++  NA +N  +      F  PV  + G K                             N A  DV++ANIL  PLI L+  +   T+ GG + L+G+L+EQAE V++ YR++F DIH       WALL GTR
Sbjct:   18 LGDALLELGALSTDIHDAASGTDREQLLFDEPGEP--SEKIWLASELTALFNEDVDIASTVQAAANAAQLRCQP---SYRITRVEEQDWVRMTQSQFTPIQISSRLWIVPSWHQIPDTAAVNL---------ILDPGLAFGTGSHPSTQLCLGWLDE-----TLRGGED--VLDYGCGSGILAIAALKLGAGHVVGIDIDPQAVAASRANAILNQCDETKAEFFATPVTDRAGSK-----------------------------NGAWADVVVANILANPLIVLAPLLMHATRRGGHIALSGILMEQAEDVIQIYRQWF-DIHITREQAGWALLTGTR 304          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: WP_025041862.1 (50S ribosomal protein L11 methyltransferase [Nitrosospira briensis])

HSP 1 Score: 190.7 bits (483), Expect = 1.000e-44
Identity = 124/333 (37.24%), Postives = 174/333 (52.25%), Query Frame = 0
Query:  108 LSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            L + LLE GA S+ I DA   T  E  +F E GEP  SEKIW  S + A +  +VD+  ++    +A +L   +P  YR+  + ++DW +  Q  + PI +  RL +  +WH   D A   L          L+ G AFG+G HP+T +C  WL E      L GG +  V DYG GSGILA+AAL  GA   VG++IDP A+ ++  NAA+N  +                 +T+A+F     A              N A  DV++ANIL  PLI L+  +   T+ GG++ L+G+L+EQAE VM+ YR++F DI        WALL GTR
Sbjct:   18 LGDALLELGALSTDIHDAGSGTDREQLLFDEPGEP--SEKIWFASELTALFNEDVDIASIVQAAASAAQL-PCHP-SYRVTHVEEQDWVRMTQSQFAPIRISSRLWIVPSWHQIPDTAAVNL---------ILDPGLAFGTGSHPSTQLCLGWLDE-----TLRGGED--VLDYGCGSGILAIAALKLGAGHVVGIDIDPQAVAASRANAALNQCD-----------------ETKAEFFETHMADRAGPG--------NGAWVDVVVANILANPLIVLAPLLMRATRKGGQIALSGILMEQAEDVMQIYRQWF-DIRITREQAGWALLTGTR 304          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: WP_043580337.1 (MULTISPECIES: 50S ribosomal protein L11 methyltransferase [Chromobacterium] >KUM04636.1 ribosomal protein L11 methyltransferase [Chromobacterium violaceum] >KZE85749.1 ribosomal protein L11 methyltransferase [Chromobacterium sp. F49] >OBU85583.1 ribosomal protein L11 methyltransferase [Chromobacterium subtsugae] >PLV43156.1 [LSU ribosomal protein L11P]-lysine N-methyltransferase [Chromobacterium violaceum])

HSP 1 Score: 190.7 bits (483), Expect = 1.000e-44
Identity = 121/333 (36.34%), Postives = 178/333 (53.45%), Query Frame = 0
Query:  108 LSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            L++ L++ GA S+ IEDA   T  E PIFGE GEP   +++W++S ++  +    DV     L+ AA   C      Y +ER+ ++DW +  Q  ++PI + DRL +  TWH+    AP  ++       + L+ G AFG+G HPTT +C  WL + L+      G E SV DYG GSGILA+AAL  GA++AVG++ID  A++S+  NAA NG++  F LP         D + +A++                         DV+LANIL  PL  L + +S   K GG++VL+G+L EQA+ +   Y ++F         G W  L GTR
Sbjct:   18 LADALMDAGALSTAIEDAWAGTDREQPIFGEPGEPV--DQLWSQSRIITLFDENADVA---LLIAAAANACQLAMPGYSVERVEEQDWVRLTQSQFEPIRISDRLWITPTWHDAP--APDAVN-------LQLDPGLAFGTGSHPTTRLCLQWLDKQLQ------GNE-SVLDYGCGSGILAIAALKLGAASAVGIDIDAQAVRSSADNAAQNGVKADFFLP---------DANPQAQY-------------------------DVVLANILANPLRMLGELLSSHVKTGGRIVLSGILAEQADELSAIYSQWFEMDAPVFDEG-WTRLTGTR 294          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: WP_003796412.1 (50S ribosomal protein L11 methyltransferase [Kingella oralis] >EEP67514.1 ribosomal protein L11 methyltransferase [Kingella oralis ATCC 51147])

HSP 1 Score: 190.3 bits (482), Expect = 1.300e-44
Identity = 121/334 (36.23%), Postives = 175/334 (52.40%), Query Frame = 0
Query:  107 LLSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            LLS+ L+E GA S+ IEDA   T++E PIFGE   P   +++W +SL++A +    DV  ++A   AA  +    P +Y +E + ++DW +  Q  + PI + DRL +  TWH+  D     L          L+ G AFG+G HPTTH+C  WL      + L GG   SV DYG GSGIL +AAL  GA +A GV+IDP AI+++  NA  N ++  F LP         DG  + +F                         DV++ANIL  PL  L   ++G T  GG++VL+G+L EQ + +   Y ++F D+  A     WA + GT+
Sbjct:   17 LLSDALMEHGALSAAIEDALAGTENEQPIFGEPDMP--QQQVWQQSLIIALFDEHADVARIIA--DAAVGIATQQP-EYSVETLEEQDWVRLTQSQFDPIKISDRLWITPTWHDAPDARAINL---------RLDPGLAFGTGSHPTTHLCLQWL-----DNNLRGGE--SVLDYGCGSGILTIAALKLGAGSATGVDIDPQAIKASNDNAVQNEVQAAFYLP---------DGLPQGQF-------------------------DVVVANILANPLRMLGDMLAGRTHTGGRIVLSGILEEQIDEMSAIYAQWF-DLAPAIVNNGWAYITGTK 294          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: WP_009174676.1 (50S ribosomal protein L11 methyltransferase [Neisseria sp. oral taxon 014] >EFI22952.1 ribosomal protein L11 methyltransferase [Neisseria sp. oral taxon 014 str. F0314])

HSP 1 Score: 189.9 bits (481), Expect = 1.700e-44
Identity = 127/333 (38.14%), Postives = 177/333 (53.15%), Query Frame = 0
Query:  108 LSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            L++ L+E GA S+ IEDA   T++E  IFGE G PA  E+IW +S V+A +G   +     A+VKAA + C    L Y  E + D+DW +  Q  + PI + +RL +  +WH     AP           + L+ G AFG+G HPTT +C  WL   L+     GG   SV DYG GSGIL +AAL  GA +AVGV+ID  AI+++  NAA N ++  F LP         DG  + +F                         DV++ANIL  PL  L + ++  TK GG++VL+GLL EQ+E + E Y ++F DI  A +   WA L G +
Sbjct:   18 LADALMEHGALSAAIEDAYAGTENEQAIFGEPGMPA--EQIWQQSKVIALFGEHDEAA---AVVKAAAQECGLKDLSYDSETLEDQDWVRLTQSQFDPIQISERLWITPSWHK----APV-----GNAVNLQLDPGLAFGTGSHPTTRLCLKWLDTQLK-----GGE--SVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAIRASNDNAAQNDVQAHFYLP---------DGLPQGQF-------------------------DVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLAEQSEELGEIYSQWF-DIEPAETEEGWARLSGVK 294          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: KZC86839.1 (ribosomal protein L11 methyltransferase [Neisseria flavescens])

HSP 1 Score: 189.9 bits (481), Expect = 1.700e-44
Identity = 126/333 (37.84%), Postives = 175/333 (52.55%), Query Frame = 0
Query:  108 LSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            L++ L+E GA S+ IEDA   T++E  IFGE G PA  E+IW +S V+A +G   D     ++++AA + C    LKY  E + D+DW +  Q  + PI + DRL +  +WH   D     L          L+ G AFG+G HPTT +C  WL   L+     GG   SV DYG GSGILA+AAL  GA +A+GV+ID  AI+++  NAA N ++  F LP         DG  + +F                         DV++ANIL  PL  L + ++  TK GG++VL+GLL EQ E +   Y ++F DI  A     WA L G +
Sbjct:   18 LADALMEHGALSAAIEDAYAGTENEQAIFGEPGMPA--EQIWQQSKVIALFGESDDAA---SIIEAAAQECGLNDLKYTGEILEDQDWVRLTQAQFDPIQISDRLWITPSWHEAPDGNAVNLQ---------LDPGLAFGTGSHPTTRLCLKWLDTQLK-----GGE--SVLDYGCGSGILAIAALKLGAGSAIGVDIDEQAIRASKDNAAQNNVDAQFYLP---------DGLPQGQF-------------------------DVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQVEELSGIYSQWF-DIEPAEIEEGWARLSGVK 294          
BLAST of NO13G01570 vs. NCBI_GenBank
Match: WP_070681420.1 (50S ribosomal protein L11 methyltransferase [Neisseria sp. HMSC055H02] >OFR04716.1 ribosomal protein L11 methyltransferase [Neisseria sp. HMSC055H02])

HSP 1 Score: 189.9 bits (481), Expect = 1.700e-44
Identity = 123/333 (36.94%), Postives = 175/333 (52.55%), Query Frame = 0
Query:  108 LSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWNRSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQEGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGEHPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTAVGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVRPAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKVVLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTR 441
            L++ L+E GA S+ IEDA   T++E  IFGE G P  +E+IW +S V+A +G   D     A+++AA + C    L Y  E + D+DW +  Q  + PI + +RL +  +WH          +       + L+ G AFG+G HPTT +C  WL   L+     GG   SV DYG GSGIL +AAL  GA +AVGV+ID  AI+++  NAA N ++  F LP         DG  + +F                         D+++ANIL  PL  LS+ ++  TK GG++VL+GLL EQ E +   YR++F DI  A     WA L G +
Sbjct:   18 LADALMENGALSAAIEDAYAGTENEQAIFGEPGMP--TEQIWQQSKVIALFGENDDAA---AMIQAASQACGLKDLAYTSEILADQDWVRLTQAQFDPIQISERLWITPSWHE---------APNSNAVNLQLDPGLAFGTGSHPTTRLCLKWLDTQLK-----GGE--SVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAIRASKDNAAQNNVDAQFYLP---------DGLPQGQF-------------------------DIVVANILANPLRMLSEMLAARTKQGGRIVLSGLLDEQVEELSGIYRQWF-DIEPAEIDEGWARLSGVK 294          
The following BLAST results are available for this feature:
BLAST of NO13G01570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21834.14.600e-15465.32ribosomal protein l11 methyltransferase [Nannochlo... [more]
CBN79469.13.600e-5838.44ribosomal protein L11 methyltransferase [Ectocarpu... [more]
XP_005835360.18.600e-5238.55hypothetical protein GUITHDRAFT_105987 [Guillardia... [more]
WP_072768155.12.700e-4537.8750S ribosomal protein L11 methyltransferase [Nitro... [more]
WP_025041862.11.000e-4437.2450S ribosomal protein L11 methyltransferase [Nitro... [more]
WP_043580337.11.000e-4436.34MULTISPECIES: 50S ribosomal protein L11 methyltran... [more]
WP_003796412.11.300e-4436.2350S ribosomal protein L11 methyltransferase [Kinge... [more]
WP_009174676.11.700e-4438.1450S ribosomal protein L11 methyltransferase [Neiss... [more]
KZC86839.11.700e-4437.84ribosomal protein L11 methyltransferase [Neisseria... [more]
WP_070681420.11.700e-4436.9450S ribosomal protein L11 methyltransferase [Neiss... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL131nonsL131Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR069ngnoR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001739NSK001739Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01570.1NO13G01570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596536gene_6850Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100051g36gene8610Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01570.1NO13G01570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01570 ID=NO13G01570|Name=NO13G01570|organism=Nannochloropsis oceanica|type=gene|length=1537bp
ATGCCTCGCAGCCGGAAACCTGCGCTATTGCTGCTGCTTCTAGCCATCAC
GAGCACACACGCCTTCCTTCTACCACACCTACACACCAGCAGTTGCCTTC
GACTACATCACTCAAAGCAGCCAACGCGTCGGCTATCCCTAAGGTCCATT
TCAACTCCTCCTTTGCACGGCAGCAGCAGCGCAGACGAGGAGGCCGATGT
TGCCACGCTCCAGGCCAACGAAGGATGGGTCGAGCCTTGGGCAGGCACCG
AGAGCAGTGATCTTGTCCGCATTGTCTTCGACTGCTACGAGAAGGACAAG
ATGGTCATTGATCCATGGCTGCTGAGTGAACTGCTGCTCGAGACAGGGGC
GTACAGCAGCCAGATAGAGGATGCGGCCAAGGACACAAAGGACGAGACAC
CGATTTTTGGAGAGCATGGAGAACCAGCTTGTAGTGAGAAGATCTGGAAT
CGGAGCTTGGTCATGGCGGATTATGGGCTTGAGGTGGACGTGGGTGGAGT
GCTGgtgcgtagcttccagaagcgagggagagggagggcgacctggttac
atttttggtctcttcttgcgtgcttgattgctgtgtcgcatgtttgcact
tgttcccgaattttattctatctcttttctcctgctcctacattcgagcg
tttctcctcctcccttctcgttcttcatcacacaaaattagGCCCTAGTC
AAAGCGGCCTTTGAGCTTTGCGACACCTACCCCTTGAAATACCGCCTTGA
GCGGATCATTGACCGCGACTGGCAAAAAGAAGTCCAGGAAGGATGGAAAC
CCATTCTCCTCGGCGACCGTCTGGTGGTGAAGTTTACATGGCACAATGAG
GAGGACATGGCGCCTTTTCTTCTCTCTGAGGAGAAGAAGATGAAGGTGAT
GACTTTGGAAGGCGGGGCGGCATTTGGCAGCGGAGAACACCCGACGACGC
ACATGTGCTGTGCATGGCTACAGGAATGGCTAGAACAGCACGCTCTAGCG
GGTGGGAGAGAGGTGAGTGTGTGTGATTACGGAGCAGGGAGTGGGATTTT
GGCGTTGGCTGCGTTGATGTTTGGGGCCAGCACGGCGGTAGGCGTGGAGA
TCGATCCCTTTGCGATTCAAAGTGCCTATCGTAACGCAGCAATGAATGGA
TTGGAGACCGTGTTTTTACTGCCAGTCGAGAAGAAGTTAGGAGGAAAAAA
AGATGGGGACACTCGCGCAAAGTTTTTGGTAGTGCGACCGGCTGGGAACG
AGAAGGAGGAGGAGGAAATGGAAATGGAAGAGGTAAACATAGCTCCAACG
GACGTGATGCTCGCCAATATACTGAAGAGGCCATTGATTGAACTATCGAA
GCAAATATCGGGTCTGACGAAGCTTGGAGGGAAGGTGGTGTTGGCGGGGT
TGTTGGTTGAGCAGGCCGAGAGTGTGATGGAGGCGTATCGGCGTTATTTT
CCCGATATACATCAAGCGAATAGCATGGGGGAGTGGGCGTTATTAGTAGG
GACGCGGAATAACGAGCCAGTGGTGTTCGAGGAATGA
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protein sequence of NO13G01570.1

>NO13G01570.1-protein ID=NO13G01570.1-protein|Name=NO13G01570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MPRSRKPALLLLLLAITSTHAFLLPHLHTSSCLRLHHSKQPTRRLSLRSI
STPPLHGSSSADEEADVATLQANEGWVEPWAGTESSDLVRIVFDCYEKDK
MVIDPWLLSELLLETGAYSSQIEDAAKDTKDETPIFGEHGEPACSEKIWN
RSLVMADYGLEVDVGGVLALVKAAFELCDTYPLKYRLERIIDRDWQKEVQ
EGWKPILLGDRLVVKFTWHNEEDMAPFLLSEEKKMKVMTLEGGAAFGSGE
HPTTHMCCAWLQEWLEQHALAGGREVSVCDYGAGSGILALAALMFGASTA
VGVEIDPFAIQSAYRNAAMNGLETVFLLPVEKKLGGKKDGDTRAKFLVVR
PAGNEKEEEEMEMEEVNIAPTDVMLANILKRPLIELSKQISGLTKLGGKV
VLAGLLVEQAESVMEAYRRYFPDIHQANSMGEWALLVGTRNNEPVVFEE*
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Synonyms
Publications