NO13G01530, NO13G01530 (gene) Nannochloropsis oceanica

Overview
NameNO13G01530
Unique NameNO13G01530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2307
Alignment locationchr13:455927..458233 +

Link to JBrowse

Properties
Property NameValue
DescriptionAspartyl-trna cytoplasmic
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:455927..458233 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004815aspartate-tRNA ligase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006422aspartyl-tRNA aminoacylation
GO:0006418tRNA aminoacylation for protein translation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR006195aa-tRNA-synth_II
IPR004523Asp-tRNA_synthase_arc
IPR004364aa-tRNA-synt_II
IPR002312Asp/Asn-tRNA-synth_IIb
Homology
BLAST of NO13G01530 vs. NCBI_GenBank
Match: EWM21818.1 (aspartyl-trna cytoplasmic [Nannochloropsis gaditana])

HSP 1 Score: 932.9 bits (2410), Expect = 4.900e-268
Identity = 464/611 (75.94%), Postives = 524/611 (85.76%), Query Frame = 0
Query:    6 SSPGCHPAQCCCSRRRPFPISSIVLFL-TTMLGTVAVRNTLAVMRRRPHT--STTTAITFIRP-TTPAALRPTLRPFTSNTPSRSTPRQPTRRTSPLASNTPAAITAAFPEISYAQSDLPTQGENAVPAVGKYTCIMSQTELHRDFQDMNKLSAADAGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGVPVEPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            SSP   PA      +R F  S ++LFL TT+L    +R+  A++RR      S   +  FIRP + P  +    R F    P +ST   P +RT+PL S +PA  TAA+PEISYAQSD PT+G++ VPAV  YT +MSQ+ELHRDF ++ KLSAADAGKVVWVRARI NVRAKGNSCF+VLRQGPF+T+QACYFKDKS PERS+AMLKFMGGLT E+VVD+QG+L  A VKSCSV DVELSI RVYVVS A AILPFQLEDAGRPE EVEASQ T+RPFPRIGQELRLDNRWLDLRVPANNCIMR+QSG+CQLFRESLY +GFVEIHTPKLIGGESEGGAGVF+TDYFGRPACLAQSPQLYKQMA+SADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEM ++EHYNEVL + HRMFKHIFEGLE R+AKELA+IREQYAS+PVAFTD PC++HWPEA+ +LR EGGM +V + +DLTGAQEL+LGELVKK++GADFFILDKYPSA+RPFYTMPCP +  +SNSYDMFLRGQEICSGAQRIHDP+LLTRTI AKG+P+EPLESY+N+FRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP
Sbjct:    3 SSPDRGPA------KRLFFSSGLLLFLTTTVLRKTGMRSASAILRRGAFNCISPFNSAAFIRPVSVPGRVH---RNFIGGNPHKST-SSPGQRTNPLRSTSPA--TAAYPEISYAQSDQPTEGDDPVPAVANYTRLMSQSELHRDFHELGKLSAADAGKVVWVRARIANVRAKGNSCFLVLRQGPFETVQACYFKDKSAPERSEAMLKFMGGLTCESVVDVQGSLQAAQVKSCSVTDVELSIQRVYVVSSAEAILPFQLEDAGRPEAEVEASQSTDRPFPRIGQELRLDNRWLDLRVPANNCIMRIQSGVCQLFRESLYAEGFVEIHTPKLIGGESEGGAGVFKTDYFGRPACLAQSPQLYKQMAVSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMTLDEHYNEVLAIAHRMFKHIFEGLETRFAKELAIIREQYASDPVAFTDGPCIVHWPEAIRMLREEGGMPEVGELEDLTGAQELRLGELVKKRHGADFFILDKYPSAVRPFYTMPCPSDAAYSNSYDMFLRGQEICSGAQRIHDPDLLTRTIAAKGLPMEPLESYVNAFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 601          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: XP_005853548.1 (aspartyl-tRNA synthetase [Nannochloropsis gaditana CCMP526] >EKU22817.1 aspartyl-tRNA synthetase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 874.4 bits (2258), Expect = 2.100e-250
Identity = 409/475 (86.11%), Postives = 446/475 (93.89%), Query Frame = 0
Query:  138 MSQTELHRDFQDMNKLSAADAGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGVPVEPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            MSQ+ELHRDF D+ KLSAADAGKVVWVRARI NVRAKGNSCF+VLRQGPF+T+QACYFKDKS PERSKAMLKFMGGLT E+VVD+QGTL  A VKSCSV DVELSI RVYVVS A AILPFQLEDAGRPE EVEASQ T+RPFPRIGQELRLDNRWLDLRVPANNCIMR+QSG+CQLFRESLY +GFVEIHTPKLIGGESEGGAGVF+TDYFGRPACLAQSPQLYKQMA+SADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEM ++EHYNEVL + HRMFKHIFEGLE R+AKELA+IREQYAS+PVAFTD PC++HWPEA+ +LR EGGM +V + +DLTGAQEL+LGELVKK++GADFFILDKYPSA+RPFYTMPCP +  +SNSYDMFLRGQEICSGAQRIHDP+LLTRTI AKG+P+EPLESY+N+FRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP
Sbjct:    1 MSQSELHRDFHDLGKLSAADAGKVVWVRARIANVRAKGNSCFLVLRQGPFETVQACYFKDKSAPERSKAMLKFMGGLTCESVVDVQGTLQAAQVKSCSVTDVELSIQRVYVVSSAEAILPFQLEDAGRPEAEVEASQSTDRPFPRIGQELRLDNRWLDLRVPANNCIMRIQSGVCQLFRESLYAEGFVEIHTPKLIGGESEGGAGVFKTDYFGRPACLAQSPQLYKQMAVSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMTLDEHYNEVLAIAHRMFKHIFEGLETRFAKELAIIREQYASDPVAFTDGPCIVHWPEAIRMLREEGGMPEVGELEDLTGAQELRLGELVKKRHGADFFILDKYPSAVRPFYTMPCPSDAAYSNSYDMFLRGQEICSGAQRIHDPDLLTRTIAAKGLPMEPLESYVNAFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 475          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: GAX26572.1 (aspartyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 718.8 bits (1854), Expect = 1.500e-203
Identity = 335/501 (66.87%), Postives = 406/501 (81.04%), Query Frame = 0
Query:  113 ISYAQSDLPTQGENAVPAVGKYTCIMSQTELHRDFQDMNKLSAADAGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGV-PVEPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            +SY+Q D         P +G +T +MSQ+   R F  +  LS  +AG+ VW+R R+ ++R KG SCF+VLRQ  F T+QACYFKDK +P+ S+ MLK++  LT E++VD++GTL  A+VKSCSV DVEL+I R++ VS A A+LPF +EDA R E EVEASQ T+RPFPR+GQE+RLD+RW+DLR PANN I+R+QS +CQLFRE+LY +GFVEIH+PKLI GESE GAGVF TDYFG  ACLAQSPQLYKQMA+++DL RVFEIGPVFRAENSNTRRHLCEFTGLDLEM I++HY E L V H++FKHIF GLE RWAKELAV+R+QYASEPV FTD+PCVLHWPEAM LL+ +  +   D   DL GA EL+LG +VK+KYG DFF+LDKYPS IRPFYTMP PE++++SNSYD+F+RGQEICSGAQR HDP+L+ + ++ KG+ P E L +YI SFRHGV PH GAGIGLERVVFLYLGLDNVRKASMFPRDPNRC P
Sbjct:   99 LSYSQQD-------TYPIMGDFTRVMSQSRTERPFATVADLSQENAGQTVWLRGRLQSIRVKGGSCFLVLRQDSFHTIQACYFKDKENPDESQKMLKYLKSLTVESIVDLEGTLVPADVKSCSVQDVELTIRRIHTVSKAAAVLPFLVEDAARSETEVEASQDTDRPFPRLGQEIRLDHRWMDLRAPANNAILRIQSAVCQLFREALYAEGFVEIHSPKLIAGESESGAGVFTTDYFGTTACLAQSPQLYKQMAIASDLPRVFEIGPVFRAENSNTRRHLCEFTGLDLEMAIDDHYMETLEVIHKLFKHIFNGLETRWAKELAVVRQQYASEPVTFTDEPCVLHWPEAMDLLKDKFDLG--DGMGDLNGAMELELGRIVKEKYGTDFFMLDKYPSTIRPFYTMPDPEDQRYSNSYDIFIRGQEICSGAQRCHDPDLVVKNLQDKGIEPGEGLSAYIESFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCTP 590          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: GAX23277.1 (aspartyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 718.0 bits (1852), Expect = 2.500e-203
Identity = 335/501 (66.87%), Postives = 406/501 (81.04%), Query Frame = 0
Query:  113 ISYAQSDLPTQGENAVPAVGKYTCIMSQTELHRDFQDMNKLSAADAGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGV-PVEPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            +SY+Q D         P +G +T +MSQ+   R F  +  LS  +AG+ VW+R R+ ++R KG SCF+VLRQ  F T+QACYFKDK +P+ S+ MLK++  LT E++VD++GT+  A+VKSCSV DVEL+I R++ VS A A+LPF +EDA R E EVEASQ T+RPFPR+GQE+RLD+RW+DLR PANN IMR+QS +CQLFRE+LY +GFVEIH+PKLI GESE GAGVF TDYFG  ACLAQSPQLYKQMA+++DL RVFEIGPVFRAENSNTRRHLCEFTGLDLEM I++HY E L V H+MFKHIF GLE RWAKELAV+R+QYASEPV FTD+PCVLHWPEAM LL+ +  +   D   DL GA EL+LG +VK+KYG DFF+LDKYPS IRPFYTMP P+++++SNSYD+F+RGQEICSGAQR HDP+L+ + ++ KG+ P E L +YI SFRHGV PH GAGIGLERVVFLYLGLDNVRKASMFPRDPNRC P
Sbjct:   99 LSYSQQD-------TYPTMGDFTRVMSQSRTERPFATVADLSQENAGQTVWLRGRLHSIRVKGGSCFLVLRQDSFHTIQACYFKDKENPDDSQKMLKYLKSLTVESIVDLEGTVVPADVKSCSVQDVELTIRRIHTVSKAAAVLPFLVEDAARSEAEVEASQDTDRPFPRLGQEIRLDHRWMDLRAPANNAIMRIQSAVCQLFREALYAEGFVEIHSPKLIAGESESGAGVFTTDYFGTTACLAQSPQLYKQMAIASDLPRVFEIGPVFRAENSNTRRHLCEFTGLDLEMAIDDHYMETLEVIHKMFKHIFNGLETRWAKELAVVRQQYASEPVTFTDEPCVLHWPEAMDLLKDKFDLG--DGMGDLNGAMELELGRIVKEKYGTDFFMLDKYPSTIRPFYTMPDPKDQRYSNSYDIFIRGQEICSGAQRCHDPDLVVKNLQDKGIEPGEGLSAYIESFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCTP 590          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: XP_002295841.1 (aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira pseudonana CCMP1335] >ACI64558.1 aspartate-tRNA ligase or aspartyl tRNA synthetase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 711.8 bits (1836), Expect = 1.800e-201
Identity = 336/481 (69.85%), Postives = 395/481 (82.12%), Query Frame = 0
Query:  138 MSQTELHRDFQDMNKLSAADAGKV-----VWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGVPV-EPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            MS++   R+F  +N +  +   K+     VW+R R+ ++RAKG SCF+VLRQ  FDT+QACYFKDK +PE+S  MLK++  LT+E+++D++G ++TA V+SCS+ D EL I+R++ VS+A A+LPF +EDA R E EVE SQ T+RPFPR+GQELRLDNRWLDLR PANN IMR+QS +CQLFRESLY QGFVEIHTPKLI GESE GAGVF TDYFG  ACLAQSPQLYKQMA+S+DL RVFEIGPVFRAENS+TRRHLCEFTGLDLEM I EHY E L V H+MFKHIFE LE RWA+EL VIR QY SEPV FTD+PCVLHWPEAM +LRGE G +  D   DLTGAQEL LG +VK+KYG DFF+LDKYPS IRPFYTMP P +++FSNSYDMF+RGQEICSGAQR HDPEL+T  I  KG+ + + L++YI+SFRHGV PH GAGIGLERVVFLYLGLDNVRKASMFPRDPNRC P
Sbjct:    1 MSRSRSGREFVKVNDIGGSTDSKIGPGSKVWLRGRVNSIRAKGGSCFLVLRQNSFDTIQACYFKDKENPEQSAKMLKYLKSLTTESMIDLEGEVSTAEVRSCSIQDAELVITRIHSVSNADAMLPFLVEDAARSEKEVEESQETDRPFPRLGQELRLDNRWLDLRAPANNAIMRIQSAVCQLFRESLYSQGFVEIHTPKLIAGESESGAGVFTTDYFGTTACLAQSPQLYKQMAISSDLDRVFEIGPVFRAENSHTRRHLCEFTGLDLEMSINEHYMETLEVVHKMFKHIFENLETRWARELEVIRTQYESEPVTFTDEPCVLHWPEAMEILRGE-GFDMGDGLGDLTGAQELALGAVVKEKYGTDFFMLDKYPSDIRPFYTMPDPTDDRFSNSYDMFIRGQEICSGAQRCHDPELVTEIINKKGIEIGDGLKTYIDSFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCTP 480          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: OEU22698.1 (aspartate-tRNA ligase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 679.5 bits (1752), Expect = 9.800e-192
Identity = 322/479 (67.22%), Postives = 386/479 (80.58%), Query Frame = 0
Query:  138 MSQTELHRDFQDMNKLSAAD---AGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGVPV-EPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            MS++   RDF ++  L   +   +G  VW+R R+ ++R KG SCF+V+RQ  F T+QA +FKDK +PE S+ M+K++  LT E+++DI+G L TA+VKSCS+ +VE+ I R++ V+ A +ILPF +EDA R E EV+ASQ T+RPFPR+GQELRLDNRW+DLR PANN IMR+QS +CQLFRESLY QGF+EIHTPKLI GESE GAGVF TDYFG+ ACLAQSPQL+KQMA+S+DL RVFEIGPVFRAENSNTRRHLCEFTGLDLEM I +HY E L V H MFKHIF GLE + +KELAVIREQY SEPV FT++PCVLHWPEAM +L+ E   +  D   DLTGA E  LG++VK+KYG DFF+LDKYP  IRPFYTMP PE+ KFSNSYD+F+RGQEICSGAQR HDPELLT  +E KG+   E L++Y+ SFR G+ PH GAGIGLERVVFLYLGLDNVRKASMFPRDPNRC P
Sbjct:    1 MSRSRTGRDFVNVKDLEDEEKHGSGDTVWLRGRLHSIRVKGGSCFLVVRQDSFHTVQAVFFKDKENPELSQKMIKYLKSLTEESIIDIEGILETADVKSCSIQNVEVKIQRIHSVTKAASILPFLVEDASRSEAEVDASQDTDRPFPRLGQELRLDNRWMDLRAPANNAIMRIQSMVCQLFRESLYSQGFIEIHTPKLIAGESESGAGVFTTDYFGQTACLAQSPQLFKQMAISSDLTRVFEIGPVFRAENSNTRRHLCEFTGLDLEMIISDHYMETLEVIHEMFKHIFTGLESKMSKELAVIREQYESEPVTFTEEPCVLHWPEAMEILK-ENDFDIGDGTGDLTGAMETTLGKVVKEKYGTDFFMLDKYPMEIRPFYTMPDPEDPKFSNSYDIFIRGQEICSGAQRCHDPELLTEILEQKGIESGEALDAYVRSFRDGIFPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCAP 478          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: XP_002184975.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43422.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 669.1 bits (1725), Expect = 1.300e-188
Identity = 316/456 (69.30%), Postives = 374/456 (82.02%), Query Frame = 0
Query:  158 AGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGVPV-EPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            +G  VW+R R+ ++R KG S F+VLRQ  FDT+QACYFK+  D E S+ M++++  LT+E+VVD++GTL  A+VKSCSV +VEL+I R++ VS A AILPF++EDA R E EVEASQ TERPFPR+GQELRLD+RW+DLR PANN IMR+QS +CQLF       GF EIHTPKLI GESE GAGVF TDYFG  ACLAQSPQLYKQMA+++DL RVFEIGPVFRAENSNTRRHLCEFTGLDLEM I++HY E L V H +FKHIF GLE RWAKEL +IREQY SEPVAFT DPCVLHWPEA+ +L+ E G +  D   D+ GA EL LG +VK+KYG DFF+LDKYPS+IRPFYTMP PE+ ++SNSYD+F+RGQEICSGAQR HDP+L+ + ++ KG+ V + L+SYI SFRHGV PH GAGIGLERVVFLYLGLDNVRKASMFPRDPNRC P
Sbjct:   13 SGDRVWLRGRLQSIRGKGKSWFLVLRQNSFDTVQACYFKNVDDAEASQKMIRYLKTLTAESVVDLEGTLVDADVKSCSVKNVELNIHRIHTVSKADAILPFEVEDAARSEQEVEASQNTERPFPRLGQELRLDHRWMDLRAPANNAIMRIQSAVCQLF-------GFCEIHTPKLIAGESESGAGVFTTDYFGTTACLAQSPQLYKQMAIASDLPRVFEIGPVFRAENSNTRRHLCEFTGLDLEMAIDDHYLETLEVVHELFKHIFTGLESRWAKELNIIREQYDSEPVAFTPDPCVLHWPEALEILQNE-GFDIADGMQDMNGAMELALGRVVKEKYGTDFFMLDKYPSSIRPFYTMPDPEDSRYSNSYDIFIRGQEICSGAQRCHDPDLVEKILQEKGIEVGDGLKSYIESFRHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCTP 460          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: CBJ29592.1 (Aspartyl-tRNA Synthetase [Ectocarpus siliculosus])

HSP 1 Score: 665.6 bits (1716), Expect = 1.500e-187
Identity = 308/485 (63.51%), Postives = 378/485 (77.94%), Query Frame = 0
Query:  131 VGKYTCIMSQTELHRDFQDMNKLSA---ADAGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGVPVEPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            +G Y+   S+ E  R F  +  L A      G+ VW+R R+  VR KG S F+V+RQ    T+QA +FKDK +PE S+ M+KF+G L  E++VD++G L  ANVKSC+ N+VE+ I  VY VS A   LPF +EDA R E EVEASQ T RPFPR+GQ+LRLDNRWLDLR PANN IMR+QSG+CQLFRESLY QGF+EIHTPK+I GESEGGAGVF TDYFG+ ACLAQSPQLYKQMA+SAD+GRVFE+GPVFRAENSNTRRHL EF GLDLEM I +HYNEV+ V H  FK IF GLE+R+  +L  +R QY S  V  T++P V+HW + + +LR  G   + +D+DDL+GAQEL LGELV +K+G+DFF LD++P+ IRPFYTMPCP+++++SNSYD+ LRGQEICSGAQR HD ++L + +E KGVP EPL  YIN+FRHG PPHGG G+GLER+VFLYLGLDN+RKASMFPRDP+RC P
Sbjct:  149 IGDYSLTRSEHETGRVFSSVKDLGAPGGVPVGREVWIRGRVHQVRGKGGSAFLVVRQDTASTVQAVHFKDKENPEDSRRMIKFVGTLPLESIVDVKGLLVEANVKSCTQNNVEIKIDSVYAVSRASLFLPFSVEDAARSEEEVEASQETGRPFPRLGQDLRLDNRWLDLRTPANNAIMRLQSGVCQLFRESLYAQGFMEIHTPKIIPGESEGGAGVFTTDYFGKQACLAQSPQLYKQMAISADMGRVFEVGPVFRAENSNTRRHLTEFNGLDLEMSITDHYNEVIQVLHNTFKSIFSGLEERYKDQLDAVRMQYPSTAVRVTEEPLVVHWEDGIQMLRDAG--HEANDFDDLSGAQELALGELVAEKFGSDFFFLDRFPTQIRPFYTMPCPDDKRYSNSYDLILRGQEICSGAQRCHDADMLMQILEEKGVPAEPLSDYINAFRHGCPPHGGGGVGLERIVFLYLGLDNIRKASMFPRDPSRCSP 631          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: XP_005834673.1 (hypothetical protein GUITHDRAFT_69446 [Guillardia theta CCMP2712] >EKX47693.1 hypothetical protein GUITHDRAFT_69446 [Guillardia theta CCMP2712])

HSP 1 Score: 664.8 bits (1714), Expect = 2.500e-187
Identity = 312/458 (68.12%), Postives = 374/458 (81.66%), Query Frame = 0
Query:  158 AGKVVWVRARIGNVRAKGNSCFIVLR--QGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELL-TRTIEAKGVPVEPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            AG+ VW+R R+  +R KG+SCF+VLR    P  T+QACYFK K D E SK  L+F+  LT E++VD++G +A A VKSCS   VE+ I R YV+S A AILPF +EDA R E E+ ASQG+E+PF  + QE RLDNRWLDLRVPAN+ IMRVQS ICQLFRE+LY + F+EIHTPKLI GESEGGA VFRTDYFGR ACLAQSPQLYKQMA+S DLGRVFEIGPVFRAE SNTRRHLCEFTGLDLEM IEEHYNE LL+ H +FKHIF GLE R++ EL+V+R QY S PV FT++PC+LHW EA+ +LR  G  E+ +  +DL+ + ELKLGELVK K+  DFFILD++P+A+RPFYTMPCP++E+F+NSYD+FLRGQEICSGAQR+HDP LL ++    KG+P+EPL++Y+ SF+HGV PH GAGIGLERVVFLYLGLDNVRKASMFPRDP+RC P
Sbjct:   25 AGETVWLRGRVSAIRGKGSSCFLVLRAIDSPSRTVQACYFKSKEDAEGSKRFLRFLNDLTLESIVDVKGLVAAAEVKSCSQGSVEVQIERCYVLSKAPAILPFLMEDAARSEEEIAASQGSEKPFSPVYQEARLDNRWLDLRVPANHAIMRVQSAICQLFREALYAENFIEIHTPKLISGESEGGAEVFRTDYFGRSACLAQSPQLYKQMAISGDLGRVFEIGPVFRAEKSNTRRHLCEFTGLDLEMAIEEHYNETLLLLHSLFKHIFLGLESRFSSELSVVRSQYKSLPVQFTEEPCILHWEEAIQMLRDAG--EEAELLEDLSSSLELKLGELVKNKFDTDFFILDRFPAAVRPFYTMPCPDDERFTNSYDVFLRGQEICSGAQRVHDPALLISQESPKKGMPLEPLQAYVTSFQHGVSPHAGAGIGLERVVFLYLGLDNVRKASMFPRDPSRCSP 480          
BLAST of NO13G01530 vs. NCBI_GenBank
Match: XP_009040020.1 (hypothetical protein AURANDRAFT_30982 [Aureococcus anophagefferens] >EGB05375.1 hypothetical protein AURANDRAFT_30982 [Aureococcus anophagefferens])

HSP 1 Score: 594.0 bits (1530), Expect = 5.400e-166
Identity = 281/459 (61.22%), Postives = 352/459 (76.69%), Query Frame = 0
Query:  162 VWVRARIGNVRAKGNSCFIVLR--QGPFDTLQACYFKDKSDPERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVSDAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPANNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFGRPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDLEMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTDDPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFFILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLTRTIEAKGV-----PVEP-LESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKASMFPRDPNRCEP 613
            VWVRAR+ NVRAKGNSCF+VLR      +T+Q CYFK+  D  RSK +LKF+  LT E+VVD +G L  A+V SCS + VE+ +  ++VV+ A  +LPF +EDA R E  +EASQ TERPF  +GQE RLD RWLDLR PA   +MRVQ+ +C+LFR ++ + GF EIH+PKL+GGESE GAGVF T+YFG  ACLAQSPQLYKQ+A   DLG VFE+GPVFRAENSNTRRHLCEFTGLD EM I  HY E + V HR FK IFEGLE+ ++KELA +R+QY SEPV  +D+P V+H+ +A+++LR + G++  DDY DL+GA EL LG LVK+++G DFF++D+YP+AIRPFYTM  P +++ SNSYD FLRGQEICSGAQR+HDP +L   ++AKG+      + P L+SY+ +F HG PPH G G GLERVVFLYLGLDN+RKAS+FPRDP RC P
Sbjct:   95 VWVRARVANVRAKGNSCFLVLRGLDDALETVQCCYFKNADDGARSKDVLKFLADLTDESVVDARGALVAADVASCSRSTVEIQLKSLFVVTRAPKVLPFLVEDAARSEAVIEASQSTERPFASVGQEARLDYRWLDLRTPAQGSVMRVQAAVCKLFRRTMDDAGFTEIHSPKLVGGESESGAGVFTTEYFGSTACLAQSPQLYKQLA-RRDLGAVFEVGPVFRAENSNTRRHLCEFTGLDFEMPITSHYLEAVRVGHRTFKAIFEGLERDFSKELAAVRDQYPSEPVVVSDEPVVIHFADAIAMLR-DSGVDVEDDYGDLSGADELALGALVKEQHGVDFFVVDRYPAAIRPFYTMRDPSDDRLSNSYDFFLRGQEICSGAQRVHDPAMLEAALKAKGIDPGAEDLSPSLKSYMTAFEHGAPPHAGCGFGLERVVFLYLGLDNIRKASLFPRDPKRCAP 551          
The following BLAST results are available for this feature:
BLAST of NO13G01530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21818.14.900e-26875.94aspartyl-trna cytoplasmic [Nannochloropsis gaditan... [more]
XP_005853548.12.100e-25086.11aspartyl-tRNA synthetase [Nannochloropsis gaditana... [more]
GAX26572.11.500e-20366.87aspartyl-tRNA synthetase [Fistulifera solaris][more]
GAX23277.12.500e-20366.87aspartyl-tRNA synthetase [Fistulifera solaris][more]
XP_002295841.11.800e-20169.85aspartate-tRNA ligase or aspartyl tRNA synthetase ... [more]
OEU22698.19.800e-19267.22aspartate-tRNA ligase [Fragilariopsis cylindrus CC... [more]
XP_002184975.11.300e-18869.30predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ29592.11.500e-18763.51Aspartyl-tRNA Synthetase [Ectocarpus siliculosus][more]
XP_005834673.12.500e-18768.12hypothetical protein GUITHDRAFT_69446 [Guillardia ... [more]
XP_009040020.15.400e-16661.22hypothetical protein AURANDRAFT_30982 [Aureococcus... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001742NSK001742Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01530.1NO13G01530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596557gene_6855Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100431g3gene8613Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01530.1NO13G01530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01530 ID=NO13G01530|Name=NO13G01530|organism=Nannochloropsis oceanica|type=gene|length=2307bp
CACCCACCTTATCAAGCAAGATACATCCTCCCTACCGTACAGGCAGCCCT
CACCATTGCATGGGATCGTCGCGCACTAAGTGCTGATGGTCTACTTCTCC
TCCTCTCCCGGCTGCCATCCTGCCCAGTGCTGCTGCTCTCGTCGTCGTCC
TTTCCCTATCTCAAGTATCGTCCTCTTCCTCACCACCATGCTGGGCACTG
TGGCCGTGCGCAATACTCTGGCGGTAATGCGCAGAAGACCCCACACTTCC
ACCACCACCGCTATTACCTTCATCCGACCCACTACCCCAGCAGCACTAAG
ACCAACTCTCCGTCCTTTCACCTCTAACACACCCTCCCGAAGCACCCCCC
GCCAGCCTACCCGTCGCACGAGTCCCCTCGCCAGCAACACCCCTGCCGCA
ATTACGGCTGCATTCCCCGAAATCAGCTACGCCCAATCGGACCTACCTAC
ACAGGGGGAGAATGCCGTGCCGGCTGTGGGGAAGTATACATGCATCATGT
CGCAAACAGAGCTGCACCGCGATTTCCAAGACATGAACAAACTCAGCGCT
GCCGACGCAGGGAAAGTGGTGTGGGTCCGTGCACGGATCGGAAACGTGCG
TGCAAAAGGAAATTCATGCTTTATTGTCTTAAGACAGGGCCCTTTTGATA
CTCTCCAGGCATGTTATTTTAAGGATAAAAGTGACCCGGAGCGGAGCAAG
GCCATGCTCAAATTCATGGGGGGGCTGACGAGTGAGACAGTGGTGGATAT
ACAGGGGACCTTGGCAACAGCCAACGTGAAGAGTTGTTCGGTCAATGACG
TTGAATTATCGATTTCTCGAGTGTACGTTGTCTCGGATGCTGGTGCGATT
CTGCCTTTTCAGTTGGAGGATGCCGGGAGACCCGAGGTCGAGGTGGAGGC
CAGTCAGGGGACCGAGCGACCTTTCCCGCGGATAGGACAGGAACTAAGGT
TGGACAATCGATGGTTGGATTTAAGGGTACCGGCGAATAATTGTATTATG
AGGGTTCAGTCGGGGATTTGTCAGTTGTTTCGGGAGAGCCTGTACGAGCA
GGGTTTCGTGGAGATCCACACGCCGAAGCTGATTGGGGGGGAGAGCGAGG
GAGGGGCGGGAGTATTTCGCACGGATTACTTCGGGCGTCCTGCGTGTTTG
GCACAGTCTCCGCAGCTTTATAAGCAGATGGCGATGAGTGCGGATTTGGG
GAGGGTGTTTGAGATAGGGCCCGTCTTCAGGGCTGAGAACAGTAATACCC
GCAGACATCTATGTGAGTTTACCGGGTTGGACCTCGAGATGGGGATCGAA
GAACATTACAACGAGGTATTGCTCGTGACTCATCGGATGTTTAAGCACAT
CTTTGAGGGACTGGAGAAGAGGTGGGCCAAGGAGTTGGCGGTGATTAGAG
AACAGTACGCATCGGAGCCCGTGGCTTTCACCGACGACCCGTGTGTATTG
CACTGGCCCGAGGCGATGAGCTTATTGAGGGGCGAAGGGGGAATGGAGGA
CGTGGATGATTACGACGATTTGACCGGGGCGCAGGAATTGAAGCTGGGCG
AATTGGTGAAGAAGAAGTATGGCGCAGATTTCTTTATCCTGGACAAATAC
CCTTCGGCGATTCGGCCGTTTTACACCATGCCATGTCCGGAGAATGAAAA
ATTCAGTAATTCGTACGATATGTTTTTGAGGGGGCAGGAGATTTGTAGTG
GTGCTCAGCGAATTCATGACCCCGAGTTGTTGACGAGGACCATTGAAGCC
AAGGGCGTGCCAGTGGAGCCGTTGGAGAGTTATATTAATTCATTTCGGCA
TGGTGTCCCACCGCATGGCGGGGCGGGGATTGGGTTGGAGCGGGTGGTGT
TTTTGTACTTGGGCTTGGATAATGTACGCAAGGCGTCTATGTTCCCCCGA
GATCCGAACAGGTGTGAGCCTTAAGGAGTGAAATTTCTAAGGAGTGAGAT
GAAGGACTATAGGACATTCATTTGTTGGTGGATGAGGAGGAAGTGGAGTC
ACCTTGCCACGAGGAAGGAGAGGACAGAGAACAAAGAAGAAAAGCGCGAT
CGGTAAATTCCATGAATCGGTGCCTATTAAATTCGGATTTCAACAACTTA
CGACTCTGCACAGATTTAATGTACGAATTGATTCAAGTTTCTCGCAAAAA
TGGCGATGAGGAAAGTCTTCCGCTGACCACTTGCCCTCGTACACCAAAAC
CCTAGAAACCGAAAAAGTGAATTTGACGAGCTTTCAAATAATTATCAAGA
TAAAGCGTCCAACAAGCAATAGATGATCATAGCACACATCGAGGCACAGC
GAAGCGC
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protein sequence of NO13G01530.1

>NO13G01530.1-protein ID=NO13G01530.1-protein|Name=NO13G01530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=613bp
MVYFSSSPGCHPAQCCCSRRRPFPISSIVLFLTTMLGTVAVRNTLAVMRR
RPHTSTTTAITFIRPTTPAALRPTLRPFTSNTPSRSTPRQPTRRTSPLAS
NTPAAITAAFPEISYAQSDLPTQGENAVPAVGKYTCIMSQTELHRDFQDM
NKLSAADAGKVVWVRARIGNVRAKGNSCFIVLRQGPFDTLQACYFKDKSD
PERSKAMLKFMGGLTSETVVDIQGTLATANVKSCSVNDVELSISRVYVVS
DAGAILPFQLEDAGRPEVEVEASQGTERPFPRIGQELRLDNRWLDLRVPA
NNCIMRVQSGICQLFRESLYEQGFVEIHTPKLIGGESEGGAGVFRTDYFG
RPACLAQSPQLYKQMAMSADLGRVFEIGPVFRAENSNTRRHLCEFTGLDL
EMGIEEHYNEVLLVTHRMFKHIFEGLEKRWAKELAVIREQYASEPVAFTD
DPCVLHWPEAMSLLRGEGGMEDVDDYDDLTGAQELKLGELVKKKYGADFF
ILDKYPSAIRPFYTMPCPENEKFSNSYDMFLRGQEICSGAQRIHDPELLT
RTIEAKGVPVEPLESYINSFRHGVPPHGGAGIGLERVVFLYLGLDNVRKA
SMFPRDPNRCEP*
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Synonyms
Publications