NO13G01420, NO13G01420 (gene) Nannochloropsis oceanica

Overview
NameNO13G01420
Unique NameNO13G01420
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2173
Alignment locationchr13:429026..431198 -

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Properties
Property NameValue
DescriptionNAD(P)-binding domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:429026..431198 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO13G01420 vs. NCBI_GenBank
Match: EWM21799.1 (NAD(P)-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 447.6 bits (1150), Expect = 3.700e-122
Identity = 237/362 (65.47%), Postives = 283/362 (78.18%), Query Frame = 0
Query:    1 MPLSVPASSFLVLVLATILPFLSHVQAFSSPSRLPSQHSPYDRRPPTIPPSSPAT-----EDRGSNLYRPLNPLLGPGSRVAIDGADAPGESNTLARLITKKLFKSQMRPYLLVPSMDKVPTGLGFDQYKGLTRYLCTAAVDEKKGGDGKIPLEIDGLVLCSEMGYTSKQVRELLERVED-EEGDKDKRETAGGTGEKKGLKRVVMLSSLGVIRREDVIWKLKQFGVDLEKRYQAEQELISQAQRRGFTYTLIRVGPLRGGGGDEGLGFEFYDHRSSSKFQTLLKNPLSVLDDKDEHFDATKRGFTFSYEDNLVFGDTGRILAAETMIKALGSAHVEDVALSLVSEQGRTWPNFQVAPWDLF 357
            MP +    +  + +   I+  +  V+AFSS SR P   SPYDRR P I PS+P T     + RGSNLYRP NPLLGPGSRVAIDGA+APGE +TLARLIT KLFKSQMRPYL++PS+ KVPTGLGFDQY+GL+RY+CTA VD+ K GDG+ P EIDGLVLCSE GYT+  +R +L RV+D +E  +   E+    GEK GLKRVVMLSSLGV RRED++WK+ QFGVDLE R+QAEQELI+QA RRGFTYTLIRVGPLRGGGG+EGLG +FY+ ++  +   L   P S+   +DE FD T+RGFTFSY DN + G+TGR+LAAET +KALGSAHVEDVA++LVSEQGRTWPNFQVAPWDLF
Sbjct:    6 MPPAYMQFATKICLFLGIISVIRPVRAFSS-SRSPPPQSPYDRRSPPINPSTPPTHADLEQGRGSNLYRPFNPLLGPGSRVAIDGANAPGEGSTLARLITIKLFKSQMRPYLVIPSLSKVPTGLGFDQYRGLSRYICTAPVDKMKEGDGRFPPEIDGLVLCSERGYTAHDIRAILARVDDGKEESRGGIESRAEAGEKTGLKRVVMLSSLGVNRREDMMWKIWQFGVDLEARHQAEQELIAQAHRRGFTYTLIRVGPLRGGGGEEGLGNDFYE-QNEGRHHPLNPFP-SLAAKRDEAFDLTRRGFTFSYCDN-IQGETGRVLAAETFVKALGSAHVEDVAIALVSEQGRTWPNFQVAPWDLF 363          
BLAST of NO13G01420 vs. NCBI_GenBank
Match: XP_005853658.1 (hypothetical protein NGA_0272502 [Nannochloropsis gaditana CCMP526] >EKU22699.1 hypothetical protein NGA_0272502 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 431.8 bits (1109), Expect = 2.100e-117
Identity = 232/357 (64.99%), Postives = 272/357 (76.19%), Query Frame = 0
Query:   18 ILPFLSHVQAFSSPSRLPSQHSPYDRRPPTIPPSSPAT-----EDRGSNLYRPLNPLLGPGSRVAIDGADAPGESNTLARLITKKLFKSQMRPYLLVPSMDKVPTGLGFDQYKGLTRYLCTAAVDEKKGGDGKIPLEIDGLVLCSEMGYTSKQVRELLERVED-EEGDKDKRETAGGTGEKKGLKRVVMLSSLGVIRREDVIWKLKQFGVDLEKRYQAE------------QELISQAQRRGFTYTLIRVGPLRGGGGDEGLGFEFYDHRSSSKFQTLLKNPLSVLDDKDEHFDATKRGFTFSYEDNLVFGDTGRILAAETMIKALGSAHVEDVALSLVSEQGRTWPNFQVAPWDLF 357
            I+  +  V+AFSS SR P   SPYDRR P+I PS+P T     + RGSNLYRP NPLLGPGSRVAIDGA+APGE +TLARLIT KLFKSQMRPYL++PS+ KVPTGLGFDQY+GL+RY+CTA VD+ K GDG+ P EIDGLVLCSE GYT+  VR +L RV+D +E  +   E+    GE  GLKRVVMLSSLGV RRED++WK+ QFGVDLE R   E             ELI+QA RRGFTYTLIRVGPLRGGGG+EGLG +FY  ++  +   L   P S+   +DE FD T+RGFTFSY DN + G+TGR+LAAET +KALGSAHVEDVA++LVSEQGRTWPNFQVAPWDLF
Sbjct:   13 IISVIRPVRAFSS-SRPPPPQSPYDRRSPSINPSTPPTHADLEQGRGSNLYRPFNPLLGPGSRVAIDGANAPGEGSTLARLITMKLFKSQMRPYLVIPSLGKVPTGLGFDQYRGLSRYICTAPVDKMKEGDGRFPPEIDGLVLCSERGYTAHDVRAILARVDDGKEESRGGIESRAEAGETTGLKRVVMLSSLGVNRREDMMWKIWQFGVDLEARVSREXXXXXXXXXXXXXELIAQAHRRGFTYTLIRVGPLRGGGGEEGLGNDFYG-QNEGRHHPLNPFP-SLAAKRDEAFDLTRRGFTFSYCDN-IQGETGRVLAAETFVKALGSAHVEDVAIALVSEQGRTWPNFQVAPWDLF 365          
BLAST of NO13G01420 vs. NCBI_GenBank
Match: XP_005822987.1 (hypothetical protein GUITHDRAFT_155334 [Guillardia theta CCMP2712] >EKX36007.1 hypothetical protein GUITHDRAFT_155334 [Guillardia theta CCMP2712])

HSP 1 Score: 72.0 bits (175), Expect = 4.200e-9
Identity = 72/255 (28.24%), Postives = 115/255 (45.10%), Query Frame = 0
Query:   73 GSRVAIDGADAPGESNTLARLITKKLFKSQMRPYLLVPS--MDKVPTGLGFDQYKGLTRYLCTAAVDEKKGGDGKIPLEIDGLVLCSEMGYTSKQVRELLERVEDEEGDKDKRETAGGTGEKKGLKRVVMLSSLGVIRREDVIWKLKQFGVDLEKRYQAEQELISQAQRRGFTYTLIRVGPLRGGGGDEGLGFEFYDHRSSSKFQTLLKNPLSVLDDKDEHFDATKRGFTFSYEDNLVFGDTGRILAAETMIKAL 326
            GSRVA+     P    T    +TK L  +  +P + VP    DK P     D +            D+       +P+ + GLV+ +E    S+Q+R  L                   G  +GL++VVM+S +GV R++++++K   F + + K Y+ E+ L   A  +GF YT++R G L+GG         FY+  S+ +FQ+ L+  L         FD   + F  S  D  + G T R LA+  + +AL
Sbjct:   48 GSRVAV----VPAYERT-GICVTKVLVDNSFKPVVQVPPGFTDKSPLRWPIDGFPNHVPEGVQLVNDQ-------LPV-VKGLVIATEDPADSQQLRYFL-------------------GGIQGLEKVVMMSRVGVDRKDELLFKFNPF-LKIGKWYEIEETLKQCAAEQGFDYTIVRTGQLQGG--------PFYN--SNREFQSALEGNL---------FDFEHQSFQVSLTDR-IDGSTSRDLASTALFEAL 249          
The following BLAST results are available for this feature:
BLAST of NO13G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 3
Match NameE-valueIdentityDescription
EWM21799.13.700e-12265.47NAD(P)-binding domain protein [Nannochloropsis gad... [more]
XP_005853658.12.100e-11764.99hypothetical protein NGA_0272502 [Nannochloropsis ... [more]
XP_005822987.14.200e-928.24hypothetical protein GUITHDRAFT_155334 [Guillardia... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001752NSK001752Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01420.1NO13G01420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|596599gene_6867Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100065g27gene8625Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01420.1NO13G01420.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01420 ID=NO13G01420|Name=NO13G01420|organism=Nannochloropsis oceanica|type=gene|length=2173bp
CGGCAATTCTGTCCGTGTCAAAACCCCCTTTTATTTGCCCTCGAACTAGA
TGTCTACACAATGTGCCACCAGACTGCACACAGTAGCTCGCCACGTATTT
CTCATCGAAAATCTGCCTGCGACGCACCCGCACTTATATTGATCGCGGAG
TCTCAATCTGCTCTACAACGCAAGGCAGGGCGGCAGAAGACGAAGGCGGC
AGAATTGCTTGACATCTGATGAACACCATATTCCAACCAAACACATAGGC
CGTGTCAATATGCCATTGTCAGTGCCAGCGTCCTCATTCCTTGTGCTGGT
CCTTGCCACTATCCTCCCCTTCCTTTCCCATGTCCAAGCTTTTTCCTCCC
CCAGCCGGCTACCCTCGCAGCACTCTCCATATGACCGCCGTCCCCCTACT
ATTCCGCCTTCTAGCCCCGCCACCGAAGACCGCGGCAGTAATTTGTATCG
ACCGCTCAATCCTCTGCTGGGACCAGGAAGCCGAGTGGCGATTGACGGCG
CCGATGCCCCTGGAGAGAGCAATACTCTCGCGAGGCTTATTACAAAGAAG
CTATTCAAGTCACAAATGAGGCCTTATTTACTTGTACCCTCCATGGACAA
AGTGCCCACAGGCCTAGGATTTGATCAGTATAAGGGGCTAACTCGTTACT
TATGCACGGCAGCGGTGGATGAGAAGAAAGGGGGGGATGGTAAAATACCT
TTGGAGATTGATGGGTTAGTCTTATGCTCGGAAATGGGGTATACTTCCAA
GCAAGTTCGCGAGCTGCTGGAACGCGTAGAGGATGAGGAGGGGGACAAGG
ACAAGAGGGAGACAGCTGGAGGGACAGGGGAGAAAAAGGGGCTGAAGAGG
GTGGTGATGTTGTCGAGCTTGGGCGTGATTCGACGGGAGGATGTCATTTG
GAAATTGAAGCAGTTTGGGGTGGACCTGGAGAAGAGGgtgagttaaatcc
gtgggtggaggatgggtggaaaggatggcaggagagtagcacttacaagc
tcgtgaatgttgtgctttttaggacgtatttctattcatcgcacacgccg
ctcatcttccttgtttcctccctccctccctccccctctcgttccaaccc
aaaaaaagTACCAAGCCGAGCAAGAGCTCATCTCGCAAGCCCAACGGCGC
GGTTTCACATATACCCTCATTCGGGTAGGACCTTTGCGAGGCGGTGGGGG
TGATGAAGGCCTGGGATTTGAATTCTATGACCACCGGTCATCTTCCAAAT
TTCAAACTCTTTTGAAAAATCCTCTTTCCGTCCTGGATGATAAAGACGAG
CACTTCGATGCGACCAAGCGAGGCTTTACTTTCTCCTACGAGGATAATCT
TGTCTTTGGCGACACTGGGAGAATTCTAGCGGCGGAGACGATGATTAAGG
CCTTGGGGTCGGCGCACGTTGAGGACGTGGCGCTATCACTGGTGAGTGAA
CAGGGACGGACATGGCCAAACTTTCAGGTGGCGCCCTGGGACTTGTTTTA
AGCGGTGGGTAGGACGGGAGGAAAGGCGTCTTTTTCTACCACACTCATAG
TTAAGAGGACGAAGATGAGCGGAGGGGATGAGGAACGAAGGAAGATACAT
AGCGCGTTGGATGCCGTTCCAGGTGCGCATTTTTGGGGGGGTAATTGAAC
CGTACAGGCGGGTGTCTAGGTGTCTGCGTATCTGTGCGTCTGTCCAATGT
TTGGATGTGTGTAATTGTGTGTAAGAAGTGTGTTTTACTGAGATGCTGCT
TGTCTGTAATTCTCTATTGGGTGTTCCCGATCGTGTACATCCCCTGTGAA
CCCCAAAAAATGAAAAGACAGAGAAGGGCGAACCACAAGCAGTAGAATCC
ATACGTCGAAAAAAACCAAAGGTTTCTCTCCAGAAGTAAATAAATGGTCA
GGGTAGGAAGGCGCCGAGAAACTGATAATATAAAAAGGGAGAGGCAGAGA
CGGACAGAGGCTATGTTTGATATAAAAAGAATTAGAGAAAATCAGAGAAA
CAGAAAGAGACACCAGAGAGGGTCAGAGCGAGACAGAGACGTAGAAAGAG
ACTATGTAGAACACGAACGCGCTAATTTGCAGGTAAAGAGTGTTTTTTTT
TTAAACGAGAAGGAAGACCCCCCAAAAAGAAAGGAACTGATATGCGAGAG
GCGACAAGGAAGGCCTGCGAGAC
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protein sequence of NO13G01420.1

>NO13G01420.1-protein ID=NO13G01420.1-protein|Name=NO13G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MPLSVPASSFLVLVLATILPFLSHVQAFSSPSRLPSQHSPYDRRPPTIPP
SSPATEDRGSNLYRPLNPLLGPGSRVAIDGADAPGESNTLARLITKKLFK
SQMRPYLLVPSMDKVPTGLGFDQYKGLTRYLCTAAVDEKKGGDGKIPLEI
DGLVLCSEMGYTSKQVRELLERVEDEEGDKDKRETAGGTGEKKGLKRVVM
LSSLGVIRREDVIWKLKQFGVDLEKRYQAEQELISQAQRRGFTYTLIRVG
PLRGGGGDEGLGFEFYDHRSSSKFQTLLKNPLSVLDDKDEHFDATKRGFT
FSYEDNLVFGDTGRILAAETMIKALGSAHVEDVALSLVSEQGRTWPNFQV
APWDLF*
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Synonyms
Publications