NO13G01390, NO13G01390 (gene) Nannochloropsis oceanica

Overview
NameNO13G01390
Unique NameNO13G01390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2658
Alignment locationchr13:423571..426547 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:423571..426547 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO13G01390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001755NSK001755Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01390.1NO13G01390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G01390.2NO13G01390.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|115374gene_6870Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01390.1NO13G01390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G01390.2NO13G01390.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01390 ID=NO13G01390|Name=NO13G01390|organism=Nannochloropsis oceanica|type=gene|length=2658bp
ACCACAGATGTATGGACGAGAACGAGGAGCACGACGACCGGAAAAATCTC
TCAAGGTCATCACCGTTCGATAACCCAAGGACTAACAGGTAAGTGAGCCA
CTCTTGCGCCAATCATCACGTTAGGTATTAATAACCCCCAACATGGCCAT
GGCCACAAAACCAGCCACGACCACGAGGACGAGGAGCTCCTGACAACGGC
CCGCCAGTATGAAGAGGAGGAAGAGGAGGAAGATGAAGAGTACCGGGAGT
TGGGGGAAGCTCTGGCTTCAAGCGGCAGTCATCAGTATCAGCATCAGCGG
GAGCAGCTCCCAGAGCACCAGCAACAACAGGAGCAGCAAGAGCCACCACT
GCCGTTGGCGCACGAGAAGGAGGAGTGGAATCAGGAGGAGGAGCTTGAGC
ATAGTTCTGCGCGGGTTTCTTTGCGACTGGAGGCCGCCACGCATGAATTG
GAGGAGGTGCAAGACGCGTTGCAAAGAGGCTCAGGGGAGAGCCAAGCGAA
TGGGAGTGAAACTCGACAGACTGCTCGGAAGGGCCCAGAGGGGAGAAGAG
TTGAGGAAAGTAGACGCGAGCCACCGCTGAATAAAAGAGAGGGGGAAGAA
AGACGGTATGATGCCGTTTTGTACGAAGGCTCCAAAGATAGGACCACCTT
GCCGTATCCTCCTTCTCCTCCTCCGCCTGCAAGCAATAGCAGCAGCAGGA
TCAGCGGTGCCAAAGCAATCCAATGGTCATCCATGGCTGCGTCCGATGCT
TTTTCCTCCTCTTCTACTTCTTTCCACCCTTCCATGGCCTCCTCCTCCCC
TTCCATCCACCGTCGCACATCATTTCAAGTAAGGAGCGGCGACCCTTTCG
GATTCACCAGCCGCAGAAAAAGAGGTACAAGCCTTGGAAATAGCGCAGCA
TCGGGAGGAGGCGGAGAAGCAAGGGGAAGAGAACGTAGAGAACAGGCAGG
AAATCTTGACCTACTCCAAAGGATGACGGAGCAACTTTCTTCCTCCTCTC
CCACTGCTGCCACTCCTGCTGCTGCTGCTTCGGCCCCTGCTCTCCTTCCC
TTCTCCTCCTCCTCCTCGCCCTCCTTCTCCTCCTCCTCCTCCTCCTCCAC
GACCACCACCACTACCATTTCGAAACCGACTCAAATCTTTCACGCCTCGT
TACCATCATTCACATCTCATTATCCATCCTCCCCCTCTTCGCGCCTGCAT
GCGAAGCCAGCATTTGCCTCTGCTGCTCCTACCACTGCTGAGACTAGCAG
GAGTACCAAACGTGCAGCGAAGCTACAGAAGCAACGGCAGCAGCAGCAAC
AGGAGGAACAGCTCTATCACGATTGGAAAAGAGGGGGCGAGGAGGAAGAG
GAGGAAGAAGACAAGGGAGACGAAGAAGAAATGACCCGGCTTTTGGGTCG
AAGCACCGCCTCGTCCTCCCTCCCTTCCTCCCTCCCTTCCTCATCCTCAG
CGTCCGTGTTGTTGACTCGACGAGTACAACAGCAGCAGCTTGATCTCACC
CGTTTGCAAGAGGAGAACGAATTGCTGCAGCGACAGCTGGAGCAGCAGCA
GCGCGTGCAGCAGGAAAGGCGGCAGGAGGTGGTGCGATTGAGGAAGGGGG
AGGTGGAAGGGAAGCAGAGGGAGGCGGTTTTGGAGGCGAATAATGCGAGA
TTGGAGAGGGAACTAAAGGAGATTAGAGGGGACATGGAGAGGATAATGAC
AGAACAAGCGGAGGTCTTGATTCAGAGCGAGGCATGGAGGGAAGAGAATG
AGCTCTTGTGCGCTCAGGTAGCAGAAATGAGAGCGAGAGCGGAGGGTGCG
GAGGGTAAGGTATTGGAGATTCTGGAGGAGCAACGAGGGATAATCAAGGA
GGAGAGGAGGAAGGAGAGGGATGTGTGGTTGCAGAAAATGATAGGCTTCG
AAGGGCAATTGGACACAGCGTTGCAAAAATTTGCGGCGGCGAAACAAGgt
atgtgtgggagggaaggaaggagggagggagggaaggtagggaaggtagg
gaaggtagaagtgtgcggatggggaaaccattgatattgagatgaaagaa
ggaggttcctttttgcgccaccttaacgttcttgaagccctttccttccc
cacttcctcacttcctctctcccctcctccctccctttagAAATCAATCA
GTTGAAGAGCACCGGCAATGAGCAACGACAGGAGCTCCGAGCGATCCGTA
AGGCCCTTCACCAGGCACACGACGACAACAACAGGAAAAAACAAGCGATT
TCGTCACTCCAAAGGCATCAGCATGAGCTCACCGAGCAGGCTTCGTTGGT
TGTGCAGCAACAGACGGAAGAATTAACACGGCTGAGGAAAATCGCACAGG
AAGGGCAGGCCTTGAGGGAGGAAGTGATGGTTCTGCAGGAGGAGGTGGAA
AGATTGGAGGTAGAGCTGGAGGGGAAGGAAAGTAAGGAGGGAGAGTGCGC
GTCGTTGCTTGTGATGGTGGAGGAGCAGCAGAGGATGATCGGGGAGATGG
AGAGGAGGGAAAGAGTATGGAAGGAAGAAGGGTTGAGGGCGGGAGGGAGG
GAGGCGGAGTGGAGGGGGAGGGGGAAGATGTGGGCGAGGGAGAGGGCGGG
CTTGGAGAAGGAGGTGAGGGAGCTGAGATTCCAGTTGCAGAAGGCGTTGG
CGAGGTGA
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protein sequence of NO13G01390.1

>NO13G01390.1-protein ID=NO13G01390.1-protein|Name=NO13G01390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=578bp
MAASDAFSSSSTSFHPSMASSSPSIHRRTSFQVRSGDPFGFTSRRKRGTS
LGNSAASGGGGEARGRERREQAGNLDLLQRMTEQLSSSSPTAATPAAAAS
APALLPFSSSSSPSFSSSSSSSTTTTTTISKPTQIFHASLPSFTSHYPSS
PSSRLHAKPAFASAAPTTAETSRSTKRAAKLQKQRQQQQQEEQLYHDWKR
GGEEEEEEEDKGDEEEMTRLLGRSTASSSLPSSLPSSSSASVLLTRRVQQ
QQLDLTRLQEENELLQRQLEQQQRVQQERRQEVVRLRKGEVEGKQREAVL
EANNARLERELKEIRGDMERIMTEQAEVLIQSEAWREENELLCAQVAEMR
ARAEGAEGKVLEILEEQRGIIKEERRKERDVWLQKMIGFEGQLDTALQKF
AAAKQEINQLKSTGNEQRQELRAIRKALHQAHDDNNRKKQAISSLQRHQH
ELTEQASLVVQQQTEELTRLRKIAQEGQALREEVMVLQEEVERLEVELEG
KESKEGECASLLVMVEEQQRMIGEMERRERVWKEEGLRAGGREAEWRGRG
KMWARERAGLEKEVRELRFQLQKALAR*
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protein sequence of NO13G01390.2

>NO13G01390.2-protein ID=NO13G01390.2-protein|Name=NO13G01390.2|organism=Nannochloropsis oceanica|type=polypeptide|length=793bp
MDENEEHDDRKNLSRSSPFDNPRTNSHDHEDEELLTTARQYEEEEEEEDE
EYRELGEALASSGSHQYQHQREQLPEHQQQQEQQEPPLPLAHEKEEWNQE
EELEHSSARVSLRLEAATHELEEVQDALQRGSGESQANGSETRQTARKGP
EGRRVEESRREPPLNKREGEERRYDAVLYEGSKDRTTLPYPPSPPPPASN
SSSRISGAKAIQWSSMAASDAFSSSSTSFHPSMASSSPSIHRRTSFQVRS
GDPFGFTSRRKRGTSLGNSAASGGGGEARGRERREQAGNLDLLQRMTEQL
SSSSPTAATPAAAASAPALLPFSSSSSPSFSSSSSSSTTTTTTISKPTQI
FHASLPSFTSHYPSSPSSRLHAKPAFASAAPTTAETSRSTKRAAKLQKQR
QQQQQEEQLYHDWKRGGEEEEEEEDKGDEEEMTRLLGRSTASSSLPSSLP
SSSSASVLLTRRVQQQQLDLTRLQEENELLQRQLEQQQRVQQERRQEVVR
LRKGEVEGKQREAVLEANNARLERELKEIRGDMERIMTEQAEVLIQSEAW
REENELLCAQVAEMRARAEGAEGKVLEILEEQRGIIKEERRKERDVWLQK
MIGFEGQLDTALQKFAAAKQEINQLKSTGNEQRQELRAIRKALHQAHDDN
NRKKQAISSLQRHQHELTEQASLVVQQQTEELTRLRKIAQEGQALREEVM
VLQEEVERLEVELEGKESKEGECASLLVMVEEQQRMIGEMERRERVWKEE
GLRAGGREAEWRGRGKMWARERAGLEKEVRELRFQLQKALAR*
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Synonyms
Publications