NO13G01160, NO13G01160 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G01160 vs. NCBI_GenBank
Match: EWM21798.1 (Protein of unknown function DUF3119 [Nannochloropsis gaditana]) HSP 1 Score: 319.3 bits (817), Expect = 8.200e-84 Identity = 161/204 (78.92%), Postives = 174/204 (85.29%), Query Frame = 0 Query: 1 MLSFRATLLVLLPAIAAGFLAPTPALS-----------TPARLTVTALNSWGGKKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGE-LSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLENFRKYVPL 193 ML+ R +LLPA+AAGFL PTP+LS PARL VTALNSWGGKK K V VEPE+IAPDYRVAAGFFL GVGLA+PPLSNPGAG+PLA+IGAFLASRTQ+VRFVFDEEAMEVMTVG DG+ LSMERENFAVGGRNRW Y +FTNWEFYPS QVP+LVYFKETQTKPEGQIHFFPVIGNPA+LLENFRKYVPL Sbjct: 1 MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYTSFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPL 204
BLAST of NO13G01160 vs. NCBI_GenBank
Match: XP_005852703.1 (hypothetical protein NGA_0681310 [Nannochloropsis gaditana CCMP526] >EKU23128.1 hypothetical protein NGA_0681310 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 318.5 bits (815), Expect = 1.400e-83 Identity = 161/204 (78.92%), Postives = 174/204 (85.29%), Query Frame = 0 Query: 1 MLSFRATLLVLLPAIAAGFLAPTPALS-----------TPARLTVTALNSWGGKKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGE-LSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLENFRKYVPL 193 ML+ R +LLPA+AAGFL PTP+LS PARL VTALNSWGGKK K V VEPE+IAPDYRVAAGFFL GVGLA+PPLSNPGAG+PLA+IGAFLASRTQ+VRFVFDEEAMEVMTVG DG+ LSMERENFAVGGRNRW Y +FTNWEFYPS QVP+LVYFKETQTKPEGQIHFFPVIGNPA+LLENFRKYVPL Sbjct: 1 MLALRTAFFILLPALAAGFLMPTPSLSKPFSIITRSRGVPARLPVTALNSWGGKKQKTTRVAVEPEVIAPDYRVAAGFFLGGVGLALPPLSNPGAGLPLALIGAFLASRTQKVRFVFDEEAMEVMTVGADGQSLSMERENFAVGGRNRWTYASFTNWEFYPSEQVPVLVYFKETQTKPEGQIHFFPVIGNPARLLENFRKYVPL 204
BLAST of NO13G01160 vs. NCBI_GenBank
Match: CEM17412.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 163.7 bits (413), Expect = 5.800e-37 Identity = 84/152 (55.26%), Postives = 105/152 (69.08%), Query Frame = 0 Query: 43 KKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGE---LSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLENFRKYVP 192 KKA V+ E ++ PD+R+AAGF G L + +N AGVP+ +IGAFLA +T RVRF FD +++EV + +DG+ L+ +NFAVGG NRW Y+TFTNWE YPSP +PILVYFKETQT PEGQIHFFPVI N KL E + P Sbjct: 68 KKAAVSKAKYETVVVPPDFRLAAGFVAGGAALCL-AANNYAAGVPIGLIGAFLALQTTRVRFEFDADSLEVKILKKDGDAETLADSGDNFAVGGANRWKYDTFTNWEMYPSPSLPILVYFKETQTIPEGQIHFFPVIMNGRKLYEIMEERCP 218
BLAST of NO13G01160 vs. NCBI_GenBank
Match: CBJ26326.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 138.7 bits (348), Expect = 2.000e-29 Identity = 74/163 (45.40%), Postives = 100/163 (61.35%), Query Frame = 0 Query: 29 PARLTVTALNSWGGKKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGELSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLENFRKYVP 192 P+R TA ++ + + + ++ D+++ G +A GLA+ L N GAG P++V+G LA + RV+F FD+ AMEV EL EN VGG +RW Y+T+TNWE YPS ++PIL+YFKETQTKPEGQIHFFP I P LL+ R VP Sbjct: 49 PSRCVATA-----ERRRRSGDLGMSTVVVPSDFKLPIG--IAAFGLAITGLGNVGAGFPVSVVGLLLAFQATRVKFEFDDVAMEVKIGETPDELESSGENAFVGGESRWNYDTWTNWEVYPSEKLPILMYFKETQTKPEGQIHFFPFIMEPDVLLQEVRARVP 204
BLAST of NO13G01160 vs. NCBI_GenBank
Match: EJK44343.1 (hypothetical protein THAOC_37123 [Thalassiosira oceanica]) HSP 1 Score: 129.0 bits (323), Expect = 1.600e-26 Identity = 75/173 (43.35%), Postives = 102/173 (58.96%), Query Frame = 0 Query: 27 STPARLTVT-----ALNSWGGKKAKVAPVVVEPE-IIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFL-------ASRTQRVRFVFDEEAMEVMTVGEDGELSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLENF 187 S+P RL+ T ++ S K+ P P+ ++ PDY++AAGF AG ++ AGV + G FL A + R+RFVFD+++ E+ VGE GEL EN VGG+NRW+Y +F NW F+PS + PILVYFKETQT P+GQIHFFP N +L + F Sbjct: 34 SSPLRLSNTPNPFESIQSIFSPKSGSPPSRAIPDAVVDPDYKLAAGFGAAGAA----TIALDQAGVVGSAFGGFLCLLALLFAVQGTRIRFVFDQDSFELKQVGE-GELDDSGENIVVGGKNRWSYESFVNWRFFPSKEFPILVYFKETQTSPDGQIHFFPAFANVDQLNDQF 201
BLAST of NO13G01160 vs. NCBI_GenBank
Match: XP_017258868.1 (PREDICTED: uncharacterized protein LOC108227966 [Daucus carota subsp. sativus] >XP_017258869.1 PREDICTED: uncharacterized protein LOC108227966 [Daucus carota subsp. sativus]) HSP 1 Score: 127.1 bits (318), Expect = 6.000e-26 Identity = 77/155 (49.68%), Postives = 97/155 (62.58%), Query Frame = 0 Query: 30 ARLTVTALNSWGGKKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGELSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLE 185 +R T+T+L KKA V P VV P+ PDYR+ L G+ + N A P+ ++G L +T RVRFVFD EA+EV VG+ EL EN VGG+NRW Y+TF NWE + P P+LVYFKETQTKPEGQ+HFFPVI N +L + Sbjct: 51 SRATITSLFGRKVKKATVVPTVV-PD---PDYRIPV--VLLGLAGGLGYTDNLLAAAPVGLLGLLLLFQTTRVRFVFDNEALEV-KVGK--ELDESGENVFVGGKNRWKYSTFVNWELW-WPNFPVLVYFKETQTKPEGQVHFFPVIFNGKQLYD 195
BLAST of NO13G01160 vs. NCBI_GenBank
Match: XP_002290096.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91848.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 125.9 bits (315), Expect = 1.300e-25 Identity = 75/185 (40.54%), Postives = 105/185 (56.76%), Query Frame = 0 Query: 12 LPAIAAGFLAPTPALSTPARLTVTALNSWGGKKAKVAPVVVEPEIIA-PDYRVAAGFFLAGVGLAVPPLSNPGA---GVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGED-GELSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQT-KPE----GQIHFFPVIGNPAKLLENF 187 +P+ A + P A P L+ GG APV P+++ DY++AA F A V + + ++ G G +A++G+ A + R+RFVFD++ E+ V D +L+ EN VGG NRW+Y++F NW+FYPS PILVYFKETQT KP+ GQIHFFP I N +L E F Sbjct: 27 VPSSRATLVKPLAADGNPFNFFKDVLSPSGGDAEVAAPVPAIPDVVVDSDYKLAAAFGAAAVSIVIATDASVGGSIFGGLIALLGSLFAVQATRIRFVFDQDCFELKAVDADTKQLADSGENIVVGGANRWSYDSFVNWDFYPSVDFPILVYFKETQTPKPDGGEPGQIHFFPAIANCKQLEEQF 211
BLAST of NO13G01160 vs. NCBI_GenBank
Match: PON88997.1 (hypothetical protein TorRG33x02_152260 [Trema orientalis]) HSP 1 Score: 125.9 bits (315), Expect = 1.300e-25 Identity = 74/152 (48.68%), Postives = 92/152 (60.53%), Query Frame = 0 Query: 33 TVTALNSWGGKKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGELSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLE 185 +V + GGKK +V+ P+ PDYR+ GLA P A P+ ++G L +T RVRFVFD+EA+EV VG +L EN VGG+NRW Y+TF NWE + P PILVYFKETQTKPEGQ+HFFPVI N KL + Sbjct: 50 SVVVASVLGGKKTDTRGIVI-PD---PDYRIPIVLLGLAGGLAYTNNLLPAA--PVGLLGILLLFQTTRVRFVFDDEALEV-KVGNGDQLQDSGENVFVGGKNRWKYSTFVNWELW-WPNFPILVYFKETQTKPEGQVHFFPVIFNGKKLYD 193
BLAST of NO13G01160 vs. NCBI_GenBank
Match: XP_024543928.1 (uncharacterized protein LOC112351026 [Selaginella moellendorffii]) HSP 1 Score: 125.6 bits (314), Expect = 1.700e-25 Identity = 80/181 (44.20%), Postives = 106/181 (58.56%), Query Frame = 0 Query: 10 VLLPAIAAGFL-----APTPAL-STPARLTVTALNSWGGKKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGELSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLE 185 VL PA+ AG + AP+ +L +P RL+ K+ + A +V E I APDYR+ L G A+ N P+ ++G L +T RV+FVFD+EA+EV EL EN VGG+NRW Y+TFTNWE + P P+LVYFKETQTKPEGQ+HFFPVI + +L + Sbjct: 9 VLRPALGAGSIGLQPRAPSSSLIFSPRRLSRPGAVKALFKRKQAAKIVRETVIPAPDYRIPV--VLLGAAGALVYTDNLLPAAPIGLLGLLLLFQTTRVKFVFDDEALEVKI---GSELQESGENVFVGGKNRWKYSTFTNWELW-WPSFPVLVYFKETQTKPEGQVHFFPVIFDGKRLYD 183
BLAST of NO13G01160 vs. NCBI_GenBank
Match: XP_004287321.1 (PREDICTED: uncharacterized protein LOC101296996 [Fragaria vesca subsp. vesca]) HSP 1 Score: 125.2 bits (313), Expect = 2.300e-25 Identity = 75/148 (50.68%), Postives = 90/148 (60.81%), Query Frame = 0 Query: 37 LNSWGGKKAKVAPVVVEPEIIAPDYRVAAGFFLAGVGLAVPPLSNPGAGVPLAVIGAFLASRTQRVRFVFDEEAMEVMTVGEDGELSMERENFAVGGRNRWAYNTFTNWEFYPSPQVPILVYFKETQTKPEGQIHFFPVIGNPAKLLE 185 + S G+K K V PE PDYR+ GLA P A P+ ++G L +T RVRFVFDEEA+EV VGE EL EN VGG+NRW Y++F NWE + P PILVYFKETQTKPEGQ+HFFPVI N +L + Sbjct: 51 VTSVSGRKVKTTRETVIPE---PDYRIPIVLLGLSGGLAYTNNLLPAA--PVGLLGLLLLFQTTRVRFVFDEEALEV-KVGE--ELENSGENVFVGGKNRWKYSSFVNWELW-WPNFPILVYFKETQTKPEGQVHFFPVIFNGKQLYD 189 The following BLAST results are available for this feature:
BLAST of NO13G01160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G01160 ID=NO13G01160|Name=NO13G01160|organism=Nannochloropsis oceanica|type=gene|length=1085bpback to top protein sequence of NO13G01160.3 >NO13G01160.3-protein ID=NO13G01160.3-protein|Name=NO13G01160.3|organism=Nannochloropsis oceanica|type=polypeptide|length=198bpback to top protein sequence of NO13G01160.2 >NO13G01160.2-protein ID=NO13G01160.2-protein|Name=NO13G01160.2|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top protein sequence of NO13G01160.1 >NO13G01160.1-protein ID=NO13G01160.1-protein|Name=NO13G01160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top Synonyms
Publications
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