NO13G01020, NO13G01020 (gene) Nannochloropsis oceanica

Overview
NameNO13G01020
Unique NameNO13G01020
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1743
Alignment locationchr13:327353..329095 -

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Properties
Property NameValue
DescriptionMate efflux family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:327353..329095 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015297antiporter activity
GO:0015238drug transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006855drug transmembrane transport
GO:0042221response to chemical
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR002528MATE
Homology
BLAST of NO13G01020 vs. NCBI_GenBank
Match: EWM21773.1 (mate efflux family protein [Nannochloropsis gaditana])

HSP 1 Score: 863.2 bits (2229), Expect = 4.500e-247
Identity = 457/571 (80.04%), Postives = 503/571 (88.09%), Query Frame = 0
Query:    1 MLYRKHCHGVSLLTLYLSFSTAFVFVRPVTSSTSNGLRLVPPSTTPKS--ALPPLPHYSTPTESPNTPSTLGIFLRGRGGAAFASLDPSKPNRLVAWLQTFAPGPDAPRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGSGGADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRIDLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGMLLLLRPNVGLSQLWAALSVFMAIQWVSGVIRFLSGTGIWGLLRRQ 570
            +L RKHCHG+SLL  +LSFSTAFVFVRP T+S  N      PS+T K+   LPPLP  S+    P   ++     + RGGA  A +  +KPNR++AWLQTFAPGPDAPR +KLDW+FLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVA+SEG+   ++    A ALSRSVSTALLLAGVVGLLQG+VYV CAAPIIRAMGVLPGS MY PAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWS++FT+LNAALDPLCMFTFGMGPSGAAMGTAIAQYVAL PLLL+VRQRARVR++ ADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVL+AA  A+ASG A   E+ EAR NLWHLIKRGC+LGA+VSGGLSVVTL SK++V+ GLTSD +VQA AL+VFP+VMACQVNKGLAYPVNGIIMGGLDWGFST+TMWLAN++CIG+LLL  P+VGLS+LW ALSVFMAIQWVSGVIRF SGTG+W LLR +
Sbjct:    2 LLPRKHCHGISLLAFFLSFSTAFVFVRPATTSFCNPTHQSKPSSTVKANKTLPPLPQSSSSPRGPVRKNSPDPPFKWRGGAFAARIPGTKPNRVLAWLQTFAPGPDAPRKQKLDWDFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVASSEGADVGESEASKANALSRSVSTALLLAGVVGLLQGVVYVLCAAPIIRAMGVLPGSAMYDPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSLVFTVLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALFPLLLRVRQRARVRLNFADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLKAATLASASGTASIREVEEARGNLWHLIKRGCVLGAMVSGGLSVVTLCSKSTVMRGLTSDLSVQATALAVFPLVMACQVNKGLAYPVNGIIMGGLDWGFSTVTMWLANVICIGLLLLWSPHVGLSELWTALSVFMAIQWVSGVIRFASGTGVWKLLRER 572          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: EJK68760.1 (hypothetical protein THAOC_10034 [Thalassiosira oceanica])

HSP 1 Score: 473.0 bits (1216), Expect = 1.300e-129
Identity = 269/477 (56.39%), Postives = 337/477 (70.65%), Query Frame = 0
Query:  101 PGPDAPRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEG----SGGADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI--DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGML--LLLRPNVGLSQLWAALSVFMAIQWVSGVIRFLSGTGIWGLLRRQ 570
            PG +A + + L+ EF  IA PAF Q  AEPLAGLVDTAYLGRLGP  LGG GVAISAQY+VSKLYNDPLLRTSISLVA+ +G     GG  +     ++LS +VS+ALLLA  VG +Q ++Y   A  I+R MGV P S M+  A SYLR+RALGTPAATLWLV+NG+FRGLGDT TPLK+SI+FT LNA LDPL +F+   G SGAA GTAIAQY AL PL++ + ++  V +   L DL  +L +Y++A S +F+RT GK+LAY+ CARQAALLG V AAAYNLTFQ+GFATTQLCES+A+AVQ+L+AREL        A         E + A   + HLI     +G +V+GGLS +T   K SVL GLT+D +++ A+ SVF  V+  QV KGLAYP NGI+MGGLDW F+ + MWLANIVC+GM+        V L ++W AL+ FM  Q V+ ++RF S TG+W LLR +
Sbjct:   66 PGEEADQKRILNREFATIALPAFFQLAAEPLAGLVDTAYLGRLGPSVLGGAGVAISAQYAVSKLYNDPLLRTSISLVASQDGRSRQQGGEASDESKRKSLSIAVSSALLLAFTVGAIQLLLYFTFAGQILRGMGVGPDSPMHHSAYSYLRVRALGTPAATLWLVTNGVFRGLGDTSTPLKYSILFTCLNAVLDPLFIFSLKFGASGAAAGTAIAQYTALCPLMISLHRKVGVDVFGQLKDLGGTLKEYVKAGSYIFLRTIGKVLAYSVCARQAALLGSVAAAAYNLTFQLGFATTQLCESVAVAVQTLLAREL--------ARGEDEVDGKEKIMAARKVRHLINGSIFVGGLVAGGLSFITHLKKDSVLRGLTTDLSIREASGSVFSAVLVTQVLKGLAYPCNGIVMGGLDWKFTMLAMWLANIVCVGMVQTWARAGTVTLGKIWWALAAFMGTQVVTSILRFQSKTGVWRLLRSE 534          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: OEU13437.1 (MATE efflux family protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 440.7 bits (1132), Expect = 7.300e-120
Identity = 264/472 (55.93%), Postives = 331/472 (70.13%), Query Frame = 0
Query:  110 KLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGS--GGA---DNXXXXAEA------LSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI--DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGML--LLLRPNVGLSQLWAALSVFMAIQWVSGVIRFLSGTGIWGLL 567
            KL  EF  I  PAF+Q  AEPLA LVDTAYLGRLGP  LGG GVAISAQY+VSKLYNDPLLRTSISLVA+++G   GG     N    ++A      LS +VS+ALLLA  VG++Q  VY   A+ I R MG+   + MY  A SYLR+RALGTPAATLWLVSNGIFRGLGDT TPL +S+IFT LNA LDPL +FTFG G SGAA GTA+AQY+AL+PL++ + ++  + I   L +L  SL  Y++A  LV  RT  K+LAY+ CAR+AA LG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+L+AREL     A   T S A      ++A+  + HLI     +G  V+  LS+ T   + S+L GLTS+ A++ A++ +FP V+  Q+ KGLAYPVNGIIMGGLDW FS + MW ANI+ +GM+    L   V L Q+W AL+ FMA Q V+G+IR+ S TGIW +L
Sbjct:    1 KLTREFFSIGFPAFIQLAAEPLAALVDTAYLGRLGPDVLGGAGVAISAQYAVSKLYNDPLLRTSISLVASTDGQARGGELDDKNVDVKSQAVNNEKKLSIAVSSALLLAFCVGVIQLFVYSLFASSITRGMGLSFQNPMYQSAFSYLRVRALGTPAATLWLVSNGIFRGLGDTRTPLIYSLIFTALNAILDPLFIFTFGFGASGAAAGTALAQYIALIPLMMALNRKVNIDIFGQLPELKSSLKAYIKAGGLVLFRTLAKVLAYSICARKAAGLGSVAAAAYNLTFQLGFATTQICEAVAVAVQTLLAREL-----ADNQTHSPA------IKAKL-VRHLINTSLFIGGTVATCLSLTTFLQRDSILRGLTSNTAIREASVVIFPAVLLTQIFKGLAYPVNGIIMGGLDWVFSMIAMWGANIISLGMIGFWSLGGTVTLEQIWLALAAFMATQVVTGIIRYESKTGIWKVL 460          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: XP_002179021.1 (hypothetical protein PHATRDRAFT_44888 [Phaeodactylum tricornutum CCAP 1055/1] >EEC49719.1 hypothetical protein PHATRDRAFT_44888 [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 439.1 bits (1128), Expect = 2.100e-119
Identity = 257/470 (54.68%), Postives = 326/470 (69.36%), Query Frame = 0
Query:  110 KLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGSGGADNXXXXAEA------LSRSVSTALLLAGVVGLLQGIVY-VFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI--DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGML---LLLRPNVGLSQLWAALSVFMAIQWVSGVIRFLSGTGIWGLLR 568
            KL  +F++I  PA +Q  AEPLA LVDTAYLGRLGP  LGG GVAISAQY+VSKLYNDPLLRTSISLVA+ +G          A+       LS +VS+ALLLA  VG++Q +VY +FC A I   MG+ P S M+  AVSYL++RA GTPAATLWLV+NGIFRGLGDT TPL +S+ FT LNA LDPL +F F  G SGAA GTA+AQY AL+PLL  + +R RV I   L  L  SL +YL+A SLV  R+ GK+LAY+ CARQAA+LG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+ +AREL           +    +   V A+  + HLI     LG  V+  LS+ T + +  +L  LT++ AVQAAA  +FPVV+  QV KGLAYPVNGIIMGGLDW +S + MW+AN  C+G++   +     V L+Q+W AL+ FM  Q V+G++R+ S TG+W +L+
Sbjct:   90 KLTRDFVQIGGPALIQLAAEPLAALVDTAYLGRLGPEVLGGAGVAISAQYAVSKLYNDPLLRTSISLVASQDGKARGKEAATQADTDKAAKELSVAVSSALLLAASVGIIQLLVYSIFCKA-ITGGMGLNPSSPMWHSAVSYLQVRAFGTPAATLWLVANGIFRGLGDTRTPLWYSLFFTALNAVLDPLFIFVFHWGASGAAAGTALAQYTALVPLLFALNRRVRVDILGQLGALGESLQKYLKAGSLVLFRSLGKVLAYSVCARQAAMLGSVSAAAYNLTFQLGFATTQICEAVAVAVQTTLAREL-----------ADTDSHPPKVRAQL-IRHLISTSIWLGGGVATALSLSTFWRRNWILASLTTNPAVQAAAAGIFPVVLLTQVLKGLAYPVNGIIMGGLDWFYSMIVMWIANFACVGLVRYFVTTSGAVSLAQIWWALAAFMGTQVVAGIVRYESKTGVWQVLQ 546          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: GAX25364.1 (hypothetical protein FisN_5Lh461 [Fistulifera solaris])

HSP 1 Score: 422.5 bits (1085), Expect = 2.000e-114
Identity = 238/429 (55.48%), Postives = 299/429 (69.70%), Query Frame = 0
Query:  105 APRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGSGGADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI--DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGMLLLLRPN 532
            A   K+L  +FL+I  PA +Q  AEPLA +VDTAYLGRL P  LGG GVA+SAQY+VSKLYNDPLLRTSISLVAAS             E  S +VS+ALLLAG VG++Q +V+   A  I + MGV P S M+  AVSYL++RALGTPAATLWLV+NGIFRGLGDT TPL +S++FTLLN   DP  +F  G G +GAA GTA+AQY+AL+PL+L + ++  + I    A L  SL QYL+A  LV  RT  K+LAY+ C+RQAALLG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+L+AR++                  +    R  + HLI    + G +V+  LS+ T F + +VL GLT++ AVQ AAL+VFP V+  QV KGLAYPVNGI+MGGLDW FS   MW+AN+VC+GM+ LL  N
Sbjct:   60 AQEKKELTKDFLKIGVPALLQLAAEPLAAIVDTAYLGRLSPAILGGAGVAVSAQYAVSKLYNDPLLRTSISLVAASSED----------ENQSLAVSSALLLAGSVGIIQMLVFFLFARAITQGMGVGPASPMWFSAVSYLQVRALGTPAATLWLVTNGIFRGLGDTRTPLIYSLLFTLLNVVFDPFFIFVAGWGAAGAAAGTALAQYIALVPLMLSLNRKVPINIVKQFAQLKTSLQQYLKAGGLVMFRTVAKVLAYSVCSRQAALLGTVPAAAYNLTFQLGFATTQICEAVAVAVQTLMARQI-----------------SQKKPKRELVRHLINSSTIFGGVVATTLSLFTWFGRANVLKGLTTNIAVQQAALAVFPAVLLTQVLKGLAYPVNGILMGGLDWVFSMTAMWVANVVCVGMITLLAAN 461          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: GAX17075.1 (hypothetical protein FisN_5Hh461 [Fistulifera solaris])

HSP 1 Score: 419.5 bits (1077), Expect = 1.700e-113
Identity = 236/429 (55.01%), Postives = 297/429 (69.23%), Query Frame = 0
Query:  105 APRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGSGGADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI--DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGMLLLLRPN 532
            A   K+L  +FL+I  PA +Q  AEPLA +VDTAYLGRL P  LGG GVA+SAQY+VSKLYNDPLLRTSISLVAAS             E  + +VS+ALLLAG VG++Q +V+   A  I + MGV P S M+  AVSYL++RALGTPAATLWLV+NGIFRGLGDT TPL +S++FTLLN   DP  +F  G G +GAA GTA+AQY+AL+PL+L + ++  + I    A L  SL QYLRA  LV  RT  K+LAY+ C+RQAALLG V AAAYNLTFQ+GFATTQ+CE++A+AVQ+L+AR++                  +    R  + HLI    + G +V+  LS+ T F + +V+ GLT++ AVQ AAL+VFP V+  QV KGLAYPVNGI+MGGLDW FS   MW AN+VC+GM+ L   N
Sbjct:   58 AQEKKELTKDFLKIGVPALLQLAAEPLAAIVDTAYLGRLSPAVLGGAGVAVSAQYAVSKLYNDPLLRTSISLVAASSED----------EDQTLAVSSALLLAGSVGIIQMLVFFVFARAITQGMGVGPASPMWFSAVSYLQVRALGTPAATLWLVTNGIFRGLGDTRTPLIYSLLFTLLNVVFDPFFIFVAGWGAAGAAAGTALAQYIALVPLMLSLNRKVPINIVKQFAQLKTSLQQYLRAGGLVMFRTVAKVLAYSVCSRQAALLGTVPAAAYNLTFQLGFATTQICEAVAVAVQTLMARQI-----------------SQKKPKRELVRHLINSSTIFGGVVATTLSLFTWFGRANVIKGLTTNVAVQQAALAVFPAVLLTQVLKGLAYPVNGILMGGLDWVFSMTAMWAANVVCVGMITLYAAN 459          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: XP_005760917.1 (hypothetical protein EMIHUDRAFT_249058 [Emiliania huxleyi CCMP1516] >EOD08488.1 hypothetical protein EMIHUDRAFT_249058 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 400.6 bits (1028), Expect = 8.300e-108
Identity = 236/475 (49.68%), Postives = 302/475 (63.58%), Query Frame = 0
Query:  104 DAPRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGS---GGADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI---------DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGMLLLLRPNVGLSQLWAALSVFMAIQWVSGVIRFLSGTGIWGLL 567
            D    ++LD EF  IA PA  QF AEPLAGLVDTAYLGRLG  ALGG G+AI A ++ +KL+NDPLLRTSIS+VA+ +G+   GG D+          ++S AL+LA  VGLLQ   +   A  ++ AMG   GS M   A+SYLR+RALG PAATLWL SNG+FRGLGDT TPL W+++F+LLNA LDPL +F  G+G +GAA GT +AQ +AL+ LL  + +R  V +          L  L PSL  Y RA  LVFVRT GK+ AY YC R AA LG V +AA+ L F +G   +QLCES+A+A Q+L+AR LG L A A     G         AR + WH+I RG L+G  V+G L+ VT F   +V+  LT+D  V+    S+   V+ CQ+ KGLA+P NG++MGGLDWGF+T  +WL + +C+G+  L  P   L  +W   + FMA Q V  V R LS TG WG L
Sbjct:   46 DGEARRRLDVEFASIAVPALAQFAAEPLAGLVDTAYLGRLGATALGGAGIAIGAHFATAKLFNDPLLRTSISIVASGDGAARLGGEDSR-------DAAISAALVLALCVGLLQLAFFALFAPRMVSAMGAGVGSPMRPTALSYLRVRALGMPAATLWLCSNGVFRGLGDTRTPLVWALLFSLLNALLDPLFIFPLGLGAAGAAAGTGLAQSIALVGLLRALSRRTGVSVSPLSLLSLASLRRLAPSLRAYGRAGVLVFVRTVGKVWAYTYCTRLAASLGAVSSAAHLLCFNLGVVLSQLCESVAVATQTLLARALGSLDAMA---KDGEGAEEAKRAARRDAWHVIGRGVLVGGGVAGVLTAVTAFRPAAVVASLTTDVVVRETCASIMAPVLLCQLFKGLAFPANGVVMGGLDWGFATAGIWLGSALCVGLAHLRAPPT-LHSIWWGFAAFMASQTVLSVGRVLSRTGPWGRL 509          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: XP_005789111.1 (hypothetical protein EMIHUDRAFT_98118 [Emiliania huxleyi CCMP1516] >EOD36682.1 hypothetical protein EMIHUDRAFT_98118 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 400.2 bits (1027), Expect = 1.100e-107
Identity = 236/475 (49.68%), Postives = 302/475 (63.58%), Query Frame = 0
Query:  104 DAPRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGS---GGADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI---------DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGMLLLLRPNVGLSQLWAALSVFMAIQWVSGVIRFLSGTGIWGLL 567
            D    ++LD EF  IA PA  QF AEPLAGLVDTAYLGRLG  ALGG G+AI A ++ +KL+NDPLLRTSIS+VA+ +G+   GG D+          ++S AL+LA  VGLLQ   +   A  ++ AMG   GS M   A+SYLR+RALG PAATLWL SNG+FRGLGDT TPL W+++F+LLNA LDPL +F  G+G +GAA GT +AQ +AL+ LL  + +R  V +          L  L PSL  Y RA  LVFVRT GK+ AY YC R AA LG V +AA+ L F +G   +QLCES+A+A Q+L+AR LG L A A     G         AR + WH+I RG L+G  V+G L+ VT F   +V+  LT+D  V+    S+   V+ CQ+ KGLA+P NG++MGGLDWGF+T  +WL + +C+G+  L  P   L  +W   + FMA Q V  V R LS TG WG L
Sbjct:   47 DGEARRRLDVEFASIAVPALAQFAAEPLAGLVDTAYLGRLGATALGGAGIAIGAHFATAKLFNDPLLRTSISIVASGDGAARLGGEDSR-------DAAISAALVLALCVGLLQLAFFALFAPRMVSAMGAGVGSPMRPTALSYLRVRALGMPAATLWLCSNGVFRGLGDTRTPLIWALLFSLLNALLDPLFIFPLGLGAAGAAAGTGLAQSIALVGLLRALSRRTGVSVSPLSLLSLASLRRLAPSLRAYGRAGVLVFVRTVGKVWAYTYCTRLAASLGAVSSAAHLLCFNLGVVLSQLCESVAVATQTLLARALGSLDAMA---KDGEGAEEAKRAARRDAWHVIGRGVLVGGGVAGVLTAVTAFRPAAVVASLTTDVVVRETCASIMAPVLLCQLFKGLAFPANGVVMGGLDWGFATAGIWLGSALCVGLAHLRAPPT-LHSIWWGFAAFMASQTVLSVGRVLSRTGPWGRL 510          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: KOO29024.1 (DNA-damage-inducible protein f [Chrysochromulina sp. CCMP291])

HSP 1 Score: 398.3 bits (1022), Expect = 4.100e-107
Identity = 244/497 (49.09%), Postives = 315/497 (63.38%), Query Frame = 0
Query:  101 PGPDAPRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGSGGADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRIDLAD-------------------------LLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIMGGLDWGFSTMTMWLANIVCIGMLLLLRPN----VGLSQLWAALSVFMAIQWVSGVIRFLSGTGIWGLLRR 569
            P   + + K +D +FL IAAPAF+QF+AEPLA LVDT YLGRLG  ALGG GVAI+AQYSVSKLYNDPLLRT+ISLVAA +G G            + +VSTALLLA VVG++QG  +   A  ++R   V P S MY  A++YLRI +LG PAATLWL +NGIFRGLGDT TPL  ++ FT LNA  DPL +F  GMG +GAA GTA+AQ +AL+PLLL ++++ +V    A+                         LL  L  YL A SLVF+R+ GKI AY+ CAR+AA LG V + A+NL FQ+G ATTQ+ ES+AIA Q+L+ARELG  R   TA A  A               ++ RG L+G  V+G LS++T      V+ GLT+   V+AAA  V P+V+ACQ  KGLAYPV+G +MG LDW  S   MW A +  + ++ +        + L+QLW+AL+V   +Q ++G+ R  SGTG W +LRR
Sbjct:    4 PAEGSQKIKDIDRQFLFIAAPAFLQFSAEPLARLVDTTYLGRLGKDALGGAGVAIAAQYSVSKLYNDPLLRTTISLVAAKDGEG--------PTVRANAVSTALLLALVVGVVQGAFFFVFARGVLRLSLVTPASAMYPSALAYLRICSLGAPAATLWLATNGIFRGLGDTTTPLACALAFTGLNAIFDPLLIFNCGMGAAGAAAGTAMAQTIALVPLLLALQRKLKVGYSGAERPAERVGVSGWPIVGLFVPPGGLPALLAGLRMYLSAGSLVFLRSIGKISAYSVCAREAARLGAVASGAHNLCFQLGVATTQIAESVAIATQTLLARELG--RTDVTAPARTAVAR-----------QIVSRGLLVGGAVAGTLSLLTFRYSREVVNGLTTIPEVRAAAYGVMPLVLACQALKGLAYPVSGALMGALDWRASAAAMWAAQLSAVSLVAIWSQRGARALSLNQLWSALAVLFVVQILAGLGRIASGTGPWVVLRR 479          
BLAST of NO13G01020 vs. NCBI_GenBank
Match: XP_002292144.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90995.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 359.4 bits (921), Expect = 2.100e-95
Identity = 222/412 (53.88%), Postives = 270/412 (65.53%), Query Frame = 0
Query:  110 KLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGGVGVAISAQYSVSKLYNDPLLRTSISLVAASEGSGG-----------------ADNXXXXAEALSRSVSTALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRALGTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGPSGAAMGTAIAQYVALLPLLLKVRQRARVRI--DLADLLPSLGQYLRAASLVFVRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQSLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSGGLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGIIM 503
            KL   F  IA PAF Q  AEPLAGLVDTAYLGRLGP  LGG GVAISAQY++SKLYNDPLLRTSISLVA+ +G  G                    XXXX           LLLA  VG +Q I+Y  CA+ I++ MGV P S M+  A SYLR+RALGTPAATLWLV+NGIFRGLGDT TP K+S++FT LNA LDP  +FT   G SGAA GTAIAQYVAL+PLL  + ++  V +     +L  +L +YLRA  LVF+RT GK+LAY+ CARQAALLG V AAAYNLTFQ+GFATTQ+CES+A+AVQ+L+ARE+        A  S       +      L HLI     +G +V+G LS++T F K SVL  LT+D  ++AA+  +FP V+  Q    L   V+ I+M
Sbjct:   45 KLTKTFFAIALPAFFQLAAEPLAGLVDTAYLGRLGPEVLGGAGVAISAQYAMSKLYNDPLLRTSISLVASEDGKRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLAFTVGAIQLILYFLCASSILQGMGVPPTSSMFHSAYSYLRVRALGTPAATLWLVTNGIFRGLGDTRTPFKYSLLFTGLNAILDPFFIFTCKQGASGAAAGTAIAQYVALVPLLYSLHRKVGVDVLGQWRELGGTLKEYLRAGGLVFLRTVGKVLAYSVCARQAALLGSVAAAAYNLTFQLGFATTQICESVAVAVQTLLAREI--------AGESNDKDEKAVTMRAKRLRHLINGSITVGGLVAGSLSLLTFFQKESVLRSLTTDAGIRAASRIIFPAVLVTQGEPCLLQVVSCIVM 448          
The following BLAST results are available for this feature:
BLAST of NO13G01020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21773.14.500e-24780.04mate efflux family protein [Nannochloropsis gadita... [more]
EJK68760.11.300e-12956.39hypothetical protein THAOC_10034 [Thalassiosira oc... [more]
OEU13437.17.300e-12055.93MATE efflux family protein, partial [Fragilariopsi... [more]
XP_002179021.12.100e-11954.68hypothetical protein PHATRDRAFT_44888 [Phaeodactyl... [more]
GAX25364.12.000e-11455.48hypothetical protein FisN_5Lh461 [Fistulifera sola... [more]
GAX17075.11.700e-11355.01hypothetical protein FisN_5Hh461 [Fistulifera sola... [more]
XP_005760917.18.300e-10849.68hypothetical protein EMIHUDRAFT_249058 [Emiliania ... [more]
XP_005789111.11.100e-10749.68hypothetical protein EMIHUDRAFT_98118 [Emiliania h... [more]
KOO29024.14.100e-10749.09DNA-damage-inducible protein f [Chrysochromulina s... [more]
XP_002292144.12.100e-9553.88predicted protein [Thalassiosira pseudonana CCMP13... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001790NSK001790Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G01020.1NO13G01020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|672337gene_6905Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100188g10gene8658Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G01020.1NO13G01020.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G01020 ID=NO13G01020|Name=NO13G01020|organism=Nannochloropsis oceanica|type=gene|length=1743bp
ATGCTGTACCGTAAGCACTGTCACGGCGTCTCACTGTTGACCCTTTACCT
TTCATTTTCCACGGCCTTTGTCTTTGTGCGACCCGTCACGTCATCCACCT
CTAATGGTCTCCGCCTCGTCCCGCCAAGTACCACACCCAAAAGCGCTCTT
CCCCCACTGCCCCATTACTCCACCCCCACCGAAAGCCCCAATACTCCATC
CACTCTCGGCATATTCCTGCGCGGACGCGGCGGCGCGGCTTTCGCGTCCC
TAGATCCCTCTAAGCCAAATCGTCTGGTGGCCTGGCTACAAACTTTTGCC
CCTGGTCCTGATGCGCCGCGGGCCAAGAAACTCGACTGGGAATTTCTGCG
CATCGCCGCCCCTGCCTTTGTACAATTCACCGCCGAACCATTAGCGGGTC
TGGTGGACACGGCATATTTAGGGAGATTGGGGCCCGTGGCGTTGGGTGGA
GTGGGGGTGGCCATTTCGGCTCAATACTCTGTATCGAAGCTGTACAATGA
CCCGCTCTTACGCACCAGCATTTCTCTTGTTGCCGCCAGTGAAGGTTCTG
GGGGCGCAGACAACGACAAAGACAAGGCTGAGGCTCTTTCGCGATCCGTT
AGCACAGCGTTGCTACTGGCGGGAGTGGTGGGGCTACTGCAAGGCATTGT
GTACGTGTTCTGTGCCGCTCCGATCATTCGCGCCATGGGTGTTTTGCCAG
GAAGCGAAATGTACGTCCCTGCCGTTTCTTACCTCCGAATCCGCGCCTTA
GGCACACCTGCCGCCACGCTATGGCTTGTCTCAAATGGTATTTTTCGTGG
TTTAGGTGATACCTTAACCCCACTGAAATGGAGCATTATTTTCACATTGT
TGAATGCTGCCTTGGATCCGCTATGTATGTTCACTTTTGGGATGGGCCCT
TCAGGTGCAGCCATGGGTACAGCCATCGCACAATACGTCGCCCTGCTCCC
TTTGCTTCTGAAAGTAAGGCAGCGCGCGCGCGTTCGAATCGACCTGGCTG
ACTTGCTCCCTTCCCTCGGTCAGTACCTCCGGGCGGCCTCTTTGGTGTTT
GTCAGGACATGGGGAAAGATTCTGGCATATGCTTACTGTGCACGCCAGGC
GGCCTTGCTGGGAGTGGTAGGCGCCGCAGCATATAACCTGACGTTTCAGG
TTGGGTTCGCGACGACGCAGTTGTGCGAATCGATTGCGATTGCGGTGCAG
TCGTTGATCGCCCGGGAGCTGGGCGTGCTCCGAGCAGCCGCGACGGCCAC
TGCCTCTGGCGCGGCCGGTAATGGGGAGATGGTAGAAGCACGGACAAACC
TTTGGCACTTGATTAAGCGCGGTTGTCTCCTCGGTGCGATCGTTTCGGGC
GGACTTTCGGTTGTCACCTTGTTTAGTAAGACGTCCGTCTTGACCGGGCT
GACCTCGGACAAGGCAGTGCAGGCCGCGGCGCTTTCAGTGTTCCCGGTGG
TGATGGCTTGTCAAGTCAATAAGGGACTTGCGTACCCCGTGAATGGTATT
ATTATGGGTGGGTTGGACTGGGGATTTTCAACCATGACCATGTGGTTGGC
AAATATTGTGTGCATTGGCATGCTGCTACTATTGCGGCCTAACGTGGGCT
TGTCACAGCTTTGGGCAGCGTTGAGTGTGTTCATGGCCATTCAGTGGGTG
AGTGGTGTGATTCGCTTCTTGTCAGGCACGGGGATATGGGGACTGTTGCG
GCGACAGCAAGATGATGTTGGAAGATGTGAGAAGAAAAGGTGA
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protein sequence of NO13G01020.1

>NO13G01020.1-protein ID=NO13G01020.1-protein|Name=NO13G01020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bp
MLYRKHCHGVSLLTLYLSFSTAFVFVRPVTSSTSNGLRLVPPSTTPKSAL
PPLPHYSTPTESPNTPSTLGIFLRGRGGAAFASLDPSKPNRLVAWLQTFA
PGPDAPRAKKLDWEFLRIAAPAFVQFTAEPLAGLVDTAYLGRLGPVALGG
VGVAISAQYSVSKLYNDPLLRTSISLVAASEGSGGADNDKDKAEALSRSV
STALLLAGVVGLLQGIVYVFCAAPIIRAMGVLPGSEMYVPAVSYLRIRAL
GTPAATLWLVSNGIFRGLGDTLTPLKWSIIFTLLNAALDPLCMFTFGMGP
SGAAMGTAIAQYVALLPLLLKVRQRARVRIDLADLLPSLGQYLRAASLVF
VRTWGKILAYAYCARQAALLGVVGAAAYNLTFQVGFATTQLCESIAIAVQ
SLIARELGVLRAAATATASGAAGNGEMVEARTNLWHLIKRGCLLGAIVSG
GLSVVTLFSKTSVLTGLTSDKAVQAAALSVFPVVMACQVNKGLAYPVNGI
IMGGLDWGFSTMTMWLANIVCIGMLLLLRPNVGLSQLWAALSVFMAIQWV
SGVIRFLSGTGIWGLLRRQQDDVGRCEKKR*
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Synonyms
Publications