NO13G00440, NO13G00440 (gene) Nannochloropsis oceanica

Overview
NameNO13G00440
Unique NameNO13G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3641
Alignment locationchr13:146169..149809 +

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Properties
Property NameValue
DescriptionAtp-dependent rna helicase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:146169..149809 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0005524ATP binding
GO:0004386helicase activity
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of NO13G00440 vs. NCBI_GenBank
Match: EWM22881.1 (atp-dependent rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 523.1 bits (1346), Expect = 1.800e-144
Identity = 397/916 (43.34%), Postives = 484/916 (52.84%), Query Frame = 0
Query:    1 MFAIERFVATEEGGGETQQQHDVDEKEKKQDKLALYLARVQQRRGDRKKESKMKRKRDLSATGQDETQEKKGIAPTYIQEDKEKTAKRKVEEEHAVETXXXXXXXXXXXXXXXXXXXXXXXXEDKAEQQASLHSSPTXXXXXXXXXXXXXXXXXXXXXXRSSGLEMIRRMLSGHMAKPSRTTQAQFTPPGKAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVQRTSLSSLMDMGTTPPLPSPPPSLPPAGTMSVANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPP--------------SLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKATEGMSEEVVREVLRL 903
            MFAIER+ ATE        ++  D + +K DKLA YLARV+ R G +K++   KR R ++  G  +  + +  AP+      E   ++K +E+   E                         +      AS    P      XXXXXXXXXXXXXXXXX   GL+ +RR+LSGHM K +R+    F P                                                                  S  R          T P                +A+A  +WGLD RLL  LA+  +    PVQA+VLP       XX+      LLP RDA+VCAPTGSGKTL+YVL LL  L++RRVGRLRGLVLVP+RDLA QV+REF +LAP+VGV V L +GQ+DF+AEQ+ + G    G+EG R   VDV+VATP                  R LVLDE DRL+NQSYQGW+ R+H A Y  RPGTF     S P                    ++  GS   SY + PTT RL                     L+P  PL KLLFSAT T+NPQKLARL+L  PRYFS+ GH++DPPP+   G D DE P    +G         SG P+TL+E+VV C+ ++KPL+LLALLLREL+AF+S P   P S P L+L+FTSSLDSTHRL RLLQLCTAT+QVPEN FAL    PP                                                           RVLVASDGMARGIDLPNV+AV+NYD PRQ  TYIHRVGRTARAGREGRS T LK GQE+EFERLR+ VGDGGKW+ VGR   G+LG LEP LPGY+KALRGL++VMG EKGGRLK TEGM+E +VR++LR+
Sbjct:   37 MFAIERYEATE------ALENRQDGQAEKNDKLAQYLARVRSRHGLKKEKKSQKRPR-VAEEGVGQPTDVR--APSMESSGLE---RKKKKEDRGTE--------RCERTTQGTQAKARHPADPPPLPSASPAFLPFPTSGTXXXXXXXXXXXXXXXXXXXXGLDSVRRLLSGHMHKATRSRPLPFPPVASGGT---------------------EIGRSEGAKMEEQSILASHTAPGKASLPPSKTSAQDIDGSAHRPQARGPQGPTTQPATFXXXXXXXXXXXXPMADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHXXXXXXXXAR-----LLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGR--GVDVLVATPXXXXXXXXXXXXXXXXXXRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTF-----SLPXXXXXXXXXXXXXXXXXXXLEDVVGS---SYTLRPTTQRL----------PFPASSLPSSSLRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPP----VG---------SGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFAL----PPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMNEGLVRQMLRM 869          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: CBJ31111.1 (DEAD box helicase [Ectocarpus siliculosus])

HSP 1 Score: 328.2 bits (840), Expect = 8.400e-86
Identity = 263/694 (37.90%), Postives = 348/694 (50.14%), Query Frame = 0
Query:  284 GTMSVANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAM---------------------QGR------REDGREGPREGW------------VDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKE----------------GRKEVEDEEIEKEEGGSTCTS-----------------------YIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKE--GEDGDEGP-EEGFIGEEGGEGEAISG-----TPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLC-----TATIQVPENIFALSSSIP-PSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRL 886
            G   +     +WGLDPRL   L    ++HFFP+Q RV+P ++      +T   S  +  RD  V APTGSGKTLV+VL +LQAL  RRV RLR LVL+P+RDLAMQV   F   A   G+ V L IGQT+F  EQ A+                     QGR         G      GW            VD+VVATPGRL+DH+ +T GFTL+HLRYL++DE DRL+NQSYQGW  +V +AAY + PGT          +  G++ +                  ++VE  +     G ++ +S                       + + P T+R R                ++     + PLRKLLFSAT T+NPQKLA L++ NP  ++            +E  G DGD  P +E       G G A+ G     TPATL+E   VC  + KPLVLL+ LLRE+       + R      L ++FTSS+DSTHRL RLLQL      TA            + +P  ++           V EFSSSL Q QR+++++R        R G VRV+V SDGMARG+DL  V  VVNYD P QAKTY+HRVGRTARAG  G +VT+ K GQ ++F  +R G+    K  R+      +   L PL   Y+  L+ L++VM  E+ G L
Sbjct:  170 GPRPMEEVAEEWGLDPRLTEILRREGVKHFFPIQVRVVPDIV------ATERHSH-VQSRDICVSAPTGSGKTLVFVLGVLQALIRRRVVRLRALVLLPSRDLAMQVHSVFKKYARGTGLRVGLAIGQTNFLEEQLALVGPVALAGNPTATARASFLRAQGRAIRPNPTMGGSNLDSGGWSGTGAPAGGSSEVDIVVATPGRLLDHLTQTPGFTLQHLRYLIIDEADRLLNQSYQGWVGKVIKAAYRKEPGTAAPVYERFTFNGGGKRNDVXXXXXXXXXXXXXXXXXQDVEKAQECDNNGSNSVSSQQQLGVTGVGKRPRPPSRRPPSAFSLDPVTVRGR---------PLATGERIRGATVSTPPLRKLLFSATLTNNPQKLAGLDVVNPLIYTATEFSTAAGGQRRETSGADGDPRPSQETRRSNLDGIGTAVEGGGRFSTPATLEETYTVCDSQAKPLVLLS-LLREM-------VGRQAD---LSVVFTSSVDSTHRLFRLLQLFGGFERTAGTDAEGGGGDGDTHLPDDAIHGDGNDDGDGGVAEFSSSLGQRQRSSIIRR-------ARAGAVRVIVCSDGMARGMDLDGVGLVVNYDVPSQAKTYVHRVGRTARAGSRGTAVTITKKGQVKQFLNMRSGIDK--KRVRLDSSPADQ-SRLLPLAGRYQLCLKDLKEVMEAERTGEL 826          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_002181564.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46778.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 290.8 bits (743), Expect = 1.500e-74
Identity = 202/556 (36.33%), Postives = 284/556 (51.08%), Query Frame = 0
Query:  288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRR--EDGRE------GPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERL 836
            +  A T W + P L + L      +FFP+QA  +P ++        S     +  RD  + APTGSGKTL YVL +L +L++R++ RLR LV++P+RDLA QVF+ F S      + V L IGQ+DF AEQ A+   +  EDG +         +  +DV+V TPGRL+DH+D T GF+LEHLR+L++DE DRL++Q+Y  W  RV ++A   R G  G                     +D +    +   +  S +  P                                LRK L SAT T +PQKLA L L NP++F +           + G        +GF      +       P  L E  V C+ + KP+VLLAL+L +L      P     S    +++FT+SLDSTHRL RLLQL   +    E         P S            V EFSS+L+Q +R+AL++RC        +  V V+V SDGM+RG+D+  V AV+NYD P  AKTY+HR GRTARAG+EG +++LLK GQ R+F+++
Sbjct:    6 IDQAATAWKIAPFLTNNLKRDGFANFFPIQALAIPDVI-------ASERHAYIQARDVCITAPTGSGKTLAYVLPVLNSLANRKIRRLRALVVLPSRDLANQVFKVFKSFMEGSDLKVGLAIGQSDFVAEQMAILALQAFEDGNDHDLPEKRDPQSTIDVLVCTPGRLVDHLDNTPGFSLEHLRFLIVDEADRLLSQTYHNWIGRVIQSANSGRGGVVG---------------------DDTDFNTNDSYRSVASSVCRP------------------------------VQLRKFLVSATLTRDPQKLASLKLVNPKHFDVH--------QLRTG-------HQGFFNTNTKK----YSMPEGLHEHTVECTAEQKPIVLLALVLDQL-----TPQQSQSSSKQSVIVFTASLDSTHRLARLLQLLWVSAGYGE---------PDS------------VVEFSSALNQHERSALMKRC-----NDPQDKVSVVVCSDGMSRGMDIDAVRAVINYDVPGLAKTYVHRCGRTARAGKEGHAISLLKGGQTRQFDKM 453          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_002289414.1 (atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335] >EED92951.1 atp-dependent RNA helicase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 283.1 bits (723), Expect = 3.100e-72
Identity = 216/585 (36.92%), Postives = 300/585 (51.28%), Query Frame = 0
Query:  328 PLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVG--------RLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIG----QTDFEAEQKAMQG-----RREDG----REGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKATEGM 892
            P    +  ++ L   RD    APTGSGKTL +VL LL AL +   G        RLR LV++P RDLA QV   F+  A    + + L +G    ++D   E++++       RR++G     E   +  VD++VATPGRLMDH+D T GFTL+HLR+LV+DE DRLVNQ YQ W  RV EA          S + +R  SS+   + G K+      +   GG   +     P                               PLRK+LFSAT T +PQKLA L L+NP++F  D + ++   N K G                         P  L E +V C+ + KP+VLLALLL   Q  S           L I +FTSS+DSTHRL RLLQL          ++      P           SS + EFSSS+S  QRA +L+RC ++ V+ R   V VLV SDGM+RG+DLP V+AV+NYD P  AKTY+HR GRTARAG+EG+++++LK GQ  +F+R+R+ +G G   K   + E+     ++  L  Y+  +R L+ V+  E+   L  ++ +
Sbjct:    4 PDVIESERNAHLRGARDVCCHAPTGSGKTLAFVLPLLTALYNESPGQSCTRGFRRLRALVVLPGRDLAKQVHDVFVRYAKGSHLKIGLAVGGGKKKSDLVYERRSLVAYDGTTRRDNGIQVFPEFGGQSAVDILVATPGRLMDHLDSTPGFTLQHLRFLVIDEADRLVNQPYQNWVGRVLEA----------SNSSNRFGSSVPVVRHGEKD------QANTGGELVSGMFGRP------------------------------VPLRKMLFSATLTQDPQKLAVLGLKNPKHF--DANQVE---NIKAGS---------------------YSVPEGLTERMVECTAEQKPMVLLALLLDTEQLHSDSAGDGVKGVNLSI-VFTSSVDSTHRLARLLQL----------LWEAGGYGP-----------SSTIAEFSSSISAKQRAGILRRCRSSNVSNR---VSVLVCSDGMSRGMDLPCVSAVINYDVPSYAKTYVHRCGRTARAGKEGKAISVLKGGQIAKFQRMRRLIGGGSVEKMGIKKEL-----IKGTLSTYQACVRALKKVIEAEENEELSRSDSL 486          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_016605956.1 (hypothetical protein SPPG_06906 [Spizellomyces punctatus DAOM BR117] >KNC97916.1 hypothetical protein SPPG_06906 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 282.7 bits (722), Expect = 4.000e-72
Identity = 233/613 (38.01%), Postives = 314/613 (51.22%), Query Frame = 0
Query:  271 PPLPSPPPSLPPAGTMSVAN--ACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRR--EDGREGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVC-SGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDL-PNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRL----GGLEPLLPGYRKALRGL 874
            P   S P ++P   T S  +  A  +WGL PR+L+ L   +I H FPVQ  VLP LL       T  SS  +P  D  V APTGSGKTL Y L +++AL  R + RLR LV++PTRDLA QV   F  L     +   L+ GQT F  EQ+ +      E   E    G VD+VVATPGRLMDH+  T+GFTL HLRYLV+DE DRL+NQSYQ W   V  AA  Q              S  GE      E + +E E          +++H T    RS                 P +   TPL+KLLFSAT T NP K+A LNL +P Y ++          A  G    +  +E  +     +   ++  P TL E ++VC S  +KPL+LL LL        +L L+         L+FT S+++ HRL  LLQL +++ ++PE+     S+   ++       AS+I   FSS L   +R  LL        + R+G +  L+ SD MARG+DL  +V AVVNYD P + KTY+HR+GRTARAGR G + T+L+  + R F+      G+  K +R G  +V +L      +E L   Y+KAL  L
Sbjct:  167 PAWISNPLTIPAQITKSSESDVADIRWGLSPRILARLREKDISHLFPVQMAVLPRLL------KTRHSSASIPPGDICVSAPTGSGKTLAYALPIVEALLDRIIPRLRALVVLPTRDLAAQVKATFDMLLRGSDLRALLITGQTPFALEQQQLVASEAWEVATEEHGSGKVDIVVATPGRLMDHLRGTKGFTLRHLRYLVIDEADRLLNQSYQDWLTHVLAAAVAQPERNLADGI----VSEFGEATSATCEPQLDENE----------FLLHKTATWRRS---QIVDGKVSAAHSSIPSVHHYTPLQKLLFSATLTRNPAKIASLNLYDPVYIAV----------APAGSASTDLQQETVVERLTTDARFVA--PHTLSERMIVCTSAGEKPLMLLHLL-------CNLGLTG-------ALVFTKSVEAAHRLAALLQLFSSSYEMPESSSEDESTEGGAVKEA--KSASTIAQAFSSDLPPSERKRLLS-------SFRDGKLTALICSDVMARGMDLGESVKAVVNYDVPTRVKTYVHRIGRTARAGRVGVAYTILEDREVRWFK------GEMAKVERSGSEKVEKLKVVSDDVEGLTAPYQKALAEL 715          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: OEU21077.1 (DEAD-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 273.9 bits (699), Expect = 1.900e-69
Identity = 215/616 (34.90%), Postives = 308/616 (50.00%), Query Frame = 0
Query:  286 MSVANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSV--GVTVALVIGQTDFEAEQKAM------QGRREDGREGPREG--WVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLAL--LLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLK-PGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889
            + +A A  +WG+   L+  L ++   HFFP+QA      +P  +      +S  +  RD    APTGSGKTL +VL +L AL+SRRV RLR LV++P+RDLA QV+  F +        + + L IGQT+F AEQK +          ++ R+ P  G   VDV+V TPGRL+DH+D T GFTL+HLR+LV+DE DRL++QSY GW QRV +  +          AP  P  S+  +     ++  +    E     C                                       LRKLL+SAT T +PQKL+ L L NP+YF  + H +    +    +  D G   G          ++   P  LKE  V C+ + KP+VLLAL                             SSL++THRL RLLQL          +FA  +        TPP        EFSS+L+Q QR+ L++RC        +  V VL+ SDGM+RG+DL +V AV++YD P  AKTY+HR GRTARAG++G ++ +LK  GQ  +F +LR+ +      +RV +  V +   +  ++P YR+ +  L++V+  E    LK+T
Sbjct:    4 LPIAEAARRWGMAEFLVRNLQSNGHEHFFPIQA----LTIPDAIIAERHMTSLRI--RDVCCAAPTGSGKTLAFVLPVLNALASRRVRRLRALVILPSRDLAQQVYGVFDAYRKGSRNDLRIGLAIGQTEFRAEQKKLILGDDADSGADNKRKIPAGGISAVDVLVCTPGRLVDHLDNTPGFTLQHLRWLVIDEADRLLSQSYHGWIQRVLDCVH----------AP--PTQSMDSKDNSTDKIYSDGTSSESPSDIC-----------------------------------QRVQLRKLLYSATLTKDPQKLSSLRLINPKYF--NAHDLKRRSSTGVNDSRDIGNMNG-----NNLENSLYRMPEQLKECTVECTAEQKPIVLLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSLEATHRLTRLLQL----------LFAAGNY------GTPPV-------EFSSNLNQNQRSMLMKRCNDE----NDRSVSVLICSDGMSRGMDLASVVAVIHYDVPGMAKTYVHRCGRTARAGQDGTAIAILKGKGQAGQFAKLRRLI---ALPERVTKTSV-KTSLVRCVIPLYRQCVSCLKEVLAAEDRNELKST 528          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: ORX97486.1 (DEAD-domain-containing protein [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 263.8 bits (673), Expect = 1.900e-66
Identity = 201/580 (34.66%), Postives = 292/580 (50.34%), Query Frame = 0
Query:  297 LDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDV 877
            L  ++LS    ++I  FF VQ  VLP L    L   +SS ++   G D  V APTGSGKTL YV+ +++ LS+R V RLR L+++PTRDL +QV   F +      + + ++ GQT F  EQ  + G      +G     VD+++ATPGRL+DH+  T  FTL+HLRYLV+DE DRL+NQSYQ W   V +AA        G     RP   I    EG    +      +EG                                    F   +T ++KLLFSAT T NP K+A L+L NPRY ++           +   D DE         EG EG     TP+TLKE ++ CS  +KP+++L LL   L+  S+             L FT S+++ +RL +L       I+V +  F  ++         P   ++ +  E+S  L Q +R ++L++        ++G +R+L+ SD +ARGIDL +V AV++YD P   K YIHRVGRTARAGREG + T+++  + R F+ + +        K++   E      LEPL+P Y K L  L+ +
Sbjct:   48 LSSQILSRCKDNSIEEFFAVQTAVLPAL----LASKSSSLNYTFSG-DLCVSAPTGSGKTLAYVIPIVETLSTRVVTRLRALIILPTRDLVVQVKDTFDAFCKGTNLKIGVITGQTSFAQEQSQIVGGGSQVLQGGASN-VDILIATPGRLIDHLTSTPNFTLQHLRYLVIDEADRLLNQSYQDWLSNVLQAA--------GKATTKRPEDPITMDSEGIPVHDAISGRVQEG--------------------------------FCDLFEPQATRVQKLLFSATLTRNPGKIASLHLVNPRYIAVQ----------RTANDNDE-------DAEGSEGRYT--TPSTLKEFMIPCSPSEKPMIVLHLLY-HLKVNSA-------------LCFTKSIEAANRLYKL-------IEVFDGFFKEAN---------PEYESTIMAAEYSGDLPQSERTSILKKF-------KKGEIRLLICSDLIARGIDLDSVEAVISYDAPMYIKKYIHRVGRTARAGREGVAYTIVEEQEMRYFKSMLQKAQHYSVVKKMNVKE----KTLEPLMPNYEKTLEVLKSI 521          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: ETI40087.1 (hypothetical protein F443_14395 [Phytophthora parasitica P1569])

HSP 1 Score: 261.2 bits (666), Expect = 1.300e-65
Identity = 212/606 (34.98%), Postives = 281/606 (46.37%), Query Frame = 0
Query:  288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPR----EGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDP-PPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889
            VA    QW L P + + LA  NIR FFPVQA  +P +L       T          D  + APTGSGKTL YV+ ++Q L  R V R+R L+++P+RDLA+QV +          +   L IGQ +F AEQ A+ G     R           VD++VATPGR                + +++DE DRL+NQSYQ W  +V+ + +                          +EV+++ +    G +      I+   IR                          TPL ++L SAT T NP+KLA + + N     I G + DP   NAK+G  GD         E  G     S TP  L E  + C    KPLVLL LL     + S              +IFT+S++STHRL RLLQL +     PE I                        EFSSSLSQ QR+AL+  C       + G V  +V SD MARG+D+ +V  VVNYD P   KTYIHRVGRTARAGR GR VTL+K GQ +   R+ K   D  K K        +   ++ L+P Y  AL+ L+D +  EK G+L+AT
Sbjct:   20 VAKLAEQWSLSPEVRATLAKLNIRSFFPVQAVAIPKILASDSDRVT----------DICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQDTPLKCGLAIGQNNFAAEQAALVGAVSGARVASTTDGGHSLVDILVATPGRXXXXXXXXXXXXXXXXQIMIVDEADRLLNQSYQDWIPKVYASVF------------------------NGQEVDEDGLAVGVGVTCRRQDSINRRRIR--------------------------TPLTRVLLSATLTRNPRKLAAIGMSNAELTKI-GRIDDPLADNAKQGTAGDSXXXXXXXXEASGAANMYS-TPTNLDEYWIECDTGSKPLVLLELLSEFAGSLS--------------IIFTASVNSTHRLARLLQLYSTD---PERI-----------------------REFSSSLSQKQRSALVADC-------KAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLK-KADNNKLKPYPL----QQEHMKTLVPRYTDALQQLKDTLEAEKAGKLQAT 511          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: ETK80241.1 (hypothetical protein L915_14037 [Phytophthora parasitica] >ETL33674.1 hypothetical protein L916_13933 [Phytophthora parasitica] >ETL86951.1 hypothetical protein L917_13725 [Phytophthora parasitica] >ETP10049.1 hypothetical protein F441_14275 [Phytophthora parasitica CJ01A1] >KUF79476.1 ATP-dependent RNA helicase DDX51 [Phytophthora nicotianae])

HSP 1 Score: 261.2 bits (666), Expect = 1.300e-65
Identity = 212/606 (34.98%), Postives = 281/606 (46.37%), Query Frame = 0
Query:  288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPR----EGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDP-PPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889
            VA    QW L P + + LA  NIR FFPVQA  +P +L       T          D  + APTGSGKTL YV+ ++Q L  R V R+R L+++P+RDLA+QV +          +   L IGQ +F AEQ A+ G     R           VD++VATPGR                + +++DE DRL+NQSYQ W  +V+ + +                          +EV+++ +    G +      I+   IR                          TPL ++L SAT T NP+KLA + + N     I G + DP   NAK+G  GD         E  G     S TP  L E  + C    KPLVLL LL     + S              +IFT+S++STHRL RLLQL +     PE I                        EFSSSLSQ QR+AL+  C       + G V  +V SD MARG+D+ +V  VVNYD P   KTYIHRVGRTARAGR GR VTL+K GQ +   R+ K   D  K K        +   ++ L+P Y  AL+ L+D +  EK G+L+AT
Sbjct:   20 VAKLAEQWSLSPEVRATLAKLNIRSFFPVQAVAIPKILASDSDRVT----------DICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQDTPLKCGLAIGQNNFAAEQAALVGAVSGARVASTTDGGHSLVDILVATPGRXXXXXXXXXXXXXXXXQIMIVDEADRLLNQSYQDWIPKVYASVF------------------------NGQEVDEDGLAVGVGVTCRRQDSINRRRIR--------------------------TPLTRVLLSATLTRNPRKLAAIGMSNAELTKI-GRIDDPLADNAKQGTAGDSXXXXXXXXEASGAANMYS-TPTNLDEYWIECDTGSKPLVLLELLSEFAGSLS--------------IIFTASVNSTHRLARLLQLYSTD---PERI-----------------------REFSSSLSQKQRSALVADC-------KAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLK-KADNNKLKPYPL----QQEHMKTLVPRYTDALQQLKDTLEAEKAGKLQAT 511          
BLAST of NO13G00440 vs. NCBI_GenBank
Match: XP_008910026.1 (hypothetical protein PPTG_14463 [Phytophthora parasitica INRA-310] >ETN04632.1 hypothetical protein PPTG_14463 [Phytophthora parasitica INRA-310])

HSP 1 Score: 261.2 bits (666), Expect = 1.300e-65
Identity = 212/606 (34.98%), Postives = 281/606 (46.37%), Query Frame = 0
Query:  288 VANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLXXSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPR----EGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHXXXXXXXXXXXXLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDP-PPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKAT 889
            VA    QW L P + + LA  NIR FFPVQA  +P +L       T          D  + APTGSGKTL YV+ ++Q L  R V R+R L+++P+RDLA+QV +          +   L IGQ +F AEQ A+ G     R           VD++VATPGR                + +++DE DRL+NQSYQ W  +V+ + +                          +EV+++ +    G +      I+   IR                          TPL ++L SAT T NP+KLA + + N     I G + DP   NAK+G  GD         E  G     S TP  L E  + C    KPLVLL LL     + S              +IFT+S++STHRL RLLQL +     PE I                        EFSSSLSQ QR+AL+  C       + G V  +V SD MARG+D+ +V  VVNYD P   KTYIHRVGRTARAGR GR VTL+K GQ +   R+ K   D  K K        +   ++ L+P Y  AL+ L+D +  EK G+L+AT
Sbjct:   20 VAKLAEQWSLSPEVRATLAKLNIRSFFPVQAVAIPKILASDSDRVT----------DICISAPTGSGKTLTYVVPIVQRLLPRVVCRVRALIVLPSRDLAVQVHQIVQQFVQDTPLKCGLAIGQNNFAAEQAALVGAVSGARVASTTDGGHSLVDILVATPGRXXXXXXXXXXXXXXXXQIMIVDEADRLLNQSYQDWIPKVYASVF------------------------NGQEVDEDGLAVGVGVTCRRQDSINRRRIR--------------------------TPLTRVLLSATLTRNPRKLAAIGMSNAELTKI-GRIDDPLADNAKQGTAGDSXXXXXXXXEASGAANMYS-TPTNLDEYWIECDTGSKPLVLLELLSEFAGSLS--------------IIFTASVNSTHRLARLLQLYSTD---PERI-----------------------REFSSSLSQKQRSALVADC-------KAGRVETVVCSDAMARGMDIEDVANVVNYDVPSFIKTYIHRVGRTARAGRHGRCVTLVKMGQMKGMMRMLK-KADNNKLKPYPL----QQEHMKTLVPRYTDALQQLKDTLEAEKAGKLQAT 511          
The following BLAST results are available for this feature:
BLAST of NO13G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22881.11.800e-14443.34atp-dependent rna helicase [Nannochloropsis gadita... [more]
CBJ31111.18.400e-8637.90DEAD box helicase [Ectocarpus siliculosus][more]
XP_002181564.11.500e-7436.33predicted protein, partial [Phaeodactylum tricornu... [more]
XP_002289414.13.100e-7236.92atp-dependent RNA helicase [Thalassiosira pseudona... [more]
XP_016605956.14.000e-7238.01hypothetical protein SPPG_06906 [Spizellomyces pun... [more]
OEU21077.11.900e-6934.90DEAD-domain-containing protein [Fragilariopsis cyl... [more]
ORX97486.11.900e-6634.66DEAD-domain-containing protein [Basidiobolus meris... [more]
ETI40087.11.300e-6534.98hypothetical protein F443_14395 [Phytophthora para... [more]
ETK80241.11.300e-6534.98hypothetical protein L915_14037 [Phytophthora para... [more]
XP_008910026.11.300e-6534.98hypothetical protein PPTG_14463 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR070ngnoR070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR057ngnoR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001866NSK001866Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00440.1NO13G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|117852gene_6973Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100788g2gene7569Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00440.1NO13G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00440 ID=NO13G00440|Name=NO13G00440|organism=Nannochloropsis oceanica|type=gene|length=3641bp
TGTCTCATTCATGAGCTGAAATTCCATTTCTAAGCTAGTGGCGCGATCCC
CCCCTTCTGGTAAGGGGGCAGATACCGAATGGGGACTCTCTTTGTCCATG
TGGCCACGCCCTCTGCCTAAAACCAAGGGCAGTTTCGACCGCTTAACTGT
GTCTCATGCGATGTCCTTCCCCGTCTCTGCACCTCCACCTCTCCACAGGT
ATTCGTCGCAGCCAGCCAATAGGCAGGGGCTGAGCAAACAGTAATTATAT
TATAGCTTTAGTCCCACAAGTGTCCCCACCGTAGAATACGACCCTAGTAG
TATCCTCCCAACCCGCCGCACATTATGTTTGCCATCGAGCGCTTTGTGGC
CACGGAGGAGGGGGGCGGTGAGACGCAGCAGCAGCACGACGTCGACGAGA
AGGAGAAGAAGCAAGACAAGCTCGCACTATACTTGGCGCGGGTGCAGCAG
CGTCGCGGGGACAGGAAAAAGGAGAGCAAGATGAAGCGGAAGCGGGACCT
GAGCGCAACCGGACAGGATGAGACGCAGGAGAAGAAGGGTATCGCACCTA
CATATATACAAGAGGACAAGGAGAAGACCGCGAAGAGAAAGGTGGAGGAA
GAGCATGCCGTGGAGACGTCGGAGGGAAAACAAGGCAAGgtacgcgtgtg
tggtggttagagggaatgcgtcatggagggctggaggggtgaatggatta
agaaacagtaccaaaaggagaaatgttgcattatttctggcagttgtttt
gactttctttgaatgaggtgctggcctgtctgtcatcgcacgtcgcccag
gtgccatccctagccctcacgacctcaccgttctcccacctacccctcct
atattaaaacagAAGGACCGGAAACGAGAGGAAAGGGAGGAAAGGAAGAA
ACGTCCACGCACCGAGGACAAGGCCGAGCAACAAGCTTCCCTCCACTCTT
CTCCAACCGCTGCTGCTGAAGCTCCTTCTCCTTCCTCCTCCTCCACCCCC
TCCCCTGCACCTCGTCCCACTCAACGTTCCTCAGGCCTGGAAATGATCCG
GCGCATGCTCAGCGGGCATATGGCGAAACCCTCGAGGACTACACAAGCAC
AATTCACTCCCCCAGGAAAAGCAGCAGCAGCAGCAGCAGAGACAGTAGAA
GCAGCAGCGGCGGAAGTATCAATAGCTCCGTCATCGCTAGCTCCTGCAGC
AACACCCACAGCAAAAGCAGCAGTTTCAGTAGCATCATTAGACAATGCCA
GAAACGATGAGCATAGGGAAGCAAAGGCAGAGAAGAAGGAGAAGAATCTG
AAGCCCAATAGTGTGCAGCGAACATCGCTCTCTTCCCTCATGGACATGGG
CACCACCCCACCTCTTCCTTCTCCACCTCCGTCCCTCCCTCCCGCAGGCA
CCATGAGCGTCGCCAACGCTTGCACTCAATGGGGACTCGATCCTCGCCTC
CTATCCGCCCTCGCCACCCACAACATCCGCCATTTCTTTCCTGTCCAAGC
CCGCGTCCTCCCCTTTCTCCTCCCTCCCCCCCTCCCTCCGTCCACCTCCT
CCTCCTCCTTCCTCCTCCCGGGGCGAGACGCCATTGTATGCGCACCAACG
GGAAGTGGAAAGACTCTCGTGTACGTCCTGACCCTGCTTCAGGCGCTCTC
TTCCCGGAGAGTGGGGAGGTTGAGAGGTCTGGTGCTGGTGCCAACACGCG
ATCTAGCCATGCAGgtagggagggagggagggaggaagcaaagcggagga
aggcaaagggacacgtggatgcctggaccgcgtcaagccttgtcttttct
tttttaccttttgtattttttcacgccgcctcctttttgtctccctccct
ccctccctccctctctccctccctaattcgctatcccttcctcagGTCTT
CCGGGAATTCATGTCCTTAGCACCGAGTGTGGGGGTGACTGTCGCTCTCG
TCATCGGCCAAACGGATTTCGAGGCCGAGCAGAAGGCCATGCAAGGGAGG
AGGGAGGACGGGAGGGAGGGCCCGAGGGAAGGGTGGGTGGATGTGGTGGT
AGCGACACCGGGGAGGCTGATGGACCACATGGATAGAACGCGAGGATTTA
CCCTCGAGCATTTGAGGTACCTGGTGTTGGATGAGGTGGATAGGCTGGTG
AACCAGTCCTATCAGGGGTGGGCTCAGCGGGTGCATGAGGCGGCGTATGT
CCAGCGACCAGGGACATTTGGCTCCACCGCGCCCTCTCGTCCTGCCTCGT
CTATTGGGGAGCAAAAAGAGGGGAGGAAAGAGGTGGAGGATGAAGAAATA
GAAAAGGAGGAAGGAGGCAGTACATGCACCAGCTACATCATCCATCCAAC
CACTATCCGTCTCCGGTCCACCCATCATGCCGCCGTCTCCTCCTCCTCCT
CCTCCTCTCCCTCCCTCCAGCCCTTCCTCCAACCCTCTACACCCCTTCGA
AAACTCCTCTTTTCGGCAACTTTCACCTCCAATCCCCAAAAGCTAGCTCG
ACTCAACCTGAGGAATCCCCGGTACTTCTCCATAGATGGTCACGTCATCG
ACCCGCCCCCCAATGCCAAGGAGGGGGAGGACGGGGACGAGGGCCCGGAG
GAAGGCTTCATAGGGGAAGAAGGAGGGGAGGGTGAAGCAATCAGTGGCAC
ACCAGCGACACTCAAGGAGGAGGTAGTGGTCTGTTCGGGGAAGGACAAGC
CCCTCGTCCTCCTTGCCCTTCTCCTCCGTGAACTCCAAGCCTTCTCCTCC
CTCCCTCTCTCCCGCCCTCCCTCCCCCCCTCTCTTGATCCTCATCTTTAC
CTCCTCCCTCGACTCCACCCACCGTCTTTGCCGCCTTCTCCAACTCTGCA
CCGCCACCATTCAAGTCCCCGAAAATATATTTGCCCTCTCTTCGTCTATT
CCTCCCTCCCTACCTCCCACTCCCCCTGCCCCAGCCAGCAGCATTGTGTG
TGAGTTTTCCTCTTCCCTCTCCCAGCCCCAGCGGGCGGCCCTTCTCCAAC
GATGTCTAACGACAGGGGTGGCAGGAAGGGAAGGAGGGGTGAGGGTACTG
GTCGCCTCGGATGGGATGGCACGAGGCATTGACCTTCCCAATGTGACTGC
GGTGGTTAATTATGACTGTCCTCGACAAGCCAAGACGTATATCCATCGGG
TGGGGAGGACGGCGAGAGCGGGGAGGGAGGGCAGGAGTGTGACGTTGTTG
AAGCCGGGGCAGGAGAGGGAGTTTGAGCGGTTGAGGAAGGGGGTGGGGGA
TGGAGGGAAGTGGAAGAGGGTGGGGAGGTTTGAGGTCGGGAGGTTGGGAG
GGCTGGAGCCGTTACTGCCCGGTTACAGGAAGGCCCTGAGGGGTTTGAGG
GATGTGATGGGACGGGAGAAGGGGGGGAGGCTGAAGGCGACGGAGGGAAT
GAGTGAGGAAGTGGTGAGGGAGGTGCTGAGGTTGGGAGGAGCAAGCGGGG
GAGGGATGGTGAAGGGTCAGGAAGAGGAGGAGGACGAGGACGAGAAGGAC
GAGAATTAGGAGCAAGGTGACGAGTAAACAAAAAGTATAGATAGAAGACT
GGATTAGTATGATACAACATGCGTCAAAGCACCCACAAAATCAACCAGAA
AGAGATTTTTCGAAGTAATGCGAAAATCGAGTGACGAGGCT
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protein sequence of NO13G00440.1

>NO13G00440.1-protein ID=NO13G00440.1-protein|Name=NO13G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=927bp
MFAIERFVATEEGGGETQQQHDVDEKEKKQDKLALYLARVQQRRGDRKKE
SKMKRKRDLSATGQDETQEKKGIAPTYIQEDKEKTAKRKVEEEHAVETSE
GKQGKKDRKREEREERKKRPRTEDKAEQQASLHSSPTAAAEAPSPSSSST
PSPAPRPTQRSSGLEMIRRMLSGHMAKPSRTTQAQFTPPGKAAAAAAETV
EAAAAEVSIAPSSLAPAATPTAKAAVSVASLDNARNDEHREAKAEKKEKN
LKPNSVQRTSLSSLMDMGTTPPLPSPPPSLPPAGTMSVANACTQWGLDPR
LLSALATHNIRHFFPVQARVLPFLLPPPLPPSTSSSSFLLPGRDAIVCAP
TGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPS
VGVTVALVIGQTDFEAEQKAMQGRREDGREGPREGWVDVVVATPGRLMDH
MDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGST
APSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHH
AAVSSSSSSSPSLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYF
SIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVV
VCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRL
CRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQP
QRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQ
AKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGR
FEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKATEGMSEEVVREVL
RLGGASGGGMVKGQEEEEDEDEKDEN*
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Synonyms
Publications