NO13G00440.1, NO13G00440.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO13G00440.1
Unique NameNO13G00440.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3237
Alignment locationchr13:146169..149809 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:146169..149809 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO13G00440.1 vs.
Match: EWM22881.1 (atp-dependent rna helicase [Nannochloropsis gaditana])

HSP 1 Score: 707.6 bits (1825), Expect = 5.100e-200
Identity = 474/944 (50.21%), Postives = 591/944 (62.61%), Query Frame = 0
Query:    1 MFAIERFVATEEGGGETQQQHDVDEKEKKQDKLALYLARVQQRRGDRKKESKMKRKRDLSATGQDETQEKKGIAPTYIQEDKEKTAKRKVE-EEHAVETSEGKQGKKDRKREEREERKKRPRTEDKAEQQASLHSSPTAAAEAPSPSSSSTPSPAPRPTQRSSGLEMIRRMLSGHMAKPSRTTQAQFTPPGKAAAAAAETVEAAAAEVSIAPSSLAPAATPTAKAAVSVASLD-NARNDEHREAKAEKKEKNLKPNSVQRTSLSSLMDMGTTPPLPSPPPSLPPAGTMSVANACTQWGLDPRLLSALATHNIRHFFPVQARVLPFLLPPPLPPSTSSSSFLLPGRDAIVCAPTGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPSVGVTVALVIGQTDFEAEQKAMQGRREDGREGPREGWVDVVVATPGRLMDHMDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGSTAPSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHHAAVSSSSSSSPSLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYFSIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVVVCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRLCRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQPQRAALLQRCLTTG----------VAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQAKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGRFEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKATEGMSEEVVREVLR----LGGASGGGMVKGQE--EEEDEDEKDEN 927
            MFAIER+ ATE        ++  D + +K DKLA YLARV+ R G +K++   KR R ++  G  +  + +  AP+      E+  K++    E    T++G Q K             R   +      AS    P   +  PS   +S+P     P++ + GL+ +RR+LSGHM K +R+    F P          +  A   E SI  S  AP       +  S   +D +A   + R  +    +    P S++                PS P SLP      +A+A  +WGLD RLL  LA+  +    PVQA+VLP LLPP LPP+      LLP RDA+VCAPTGSGKTL+YVL LL  L++RRVGRLRGLVLVP+RDLA QV+REF +LAP+VGV V L +GQ+DF+AEQ+ + G    G+EG R   VDV+VATPGRL+DH++RT GFTL HLR LVLDE DRL+NQSYQGW+ R+H A Y  RPGTF S  PS P S              E++         +SY + PTT RL     +  SSS          L+P  PL KLLFSAT T+NPQKLARL+L  PRYFS+ GH++DPPP+   G D DE P    +G         SG P+TL+E+VV C+ ++KPL+LLALLLREL+AF+S P   P S P L+L+FTSSLDSTHRL RLLQLCTAT+QVPEN FAL  S+PPSLPP+ P+  SSIV EFSSSLSQPQRAALLQRCL               G+EGGVRVLVASDGMARGIDLPNV+AV+NYD PRQ  TYIHRVGRTARAGREGRS T LK GQE+EFERLR+ VGDGGKW+ VGR   G+LG LEP LPGY+KALRGL++VMG EKGGRLK TEGM+E +VR++LR    LGG + G   +G+E  EEE+E+E +EN
Sbjct:   37 MFAIERYEATEA------LENRQDGQAEKNDKLAQYLARVRSRHGLKKEKKSQKRPR-VAEEGVGQPTDVR--APSMESSGLERKKKKEDRGTERCERTTQGTQAKA------------RHPADPPPLPSASPAFLPFPTSGTPSSLPASSPPSLDPPSRATPGLDSVRRLLSGHMHKATRSRPLPFPPVASGGTEIGRSEGAKMEEQSILASHTAPGKASLPPSKTSAQDIDGSAHRPQARGPQGPTTQPATFPTSLR----------------PSLPSSLP------MADAWKRWGLDTRLLPILASRGMSTLLPVQAQVLPHLLPPLLPPAR-----LLPCRDAVVCAPTGSGKTLIYVLVLLHQLANRRVGRLRGLVLVPSRDLATQVWREFQTLAPTVGVKVGLAVGQSDFQAEQQRVMGWEGGGKEGGR--GVDVLVATPGRLIDHLERTPGFTLTHLRCLVLDEADRLLNQSYQGWSSRIHHAIYSPRPGTF-SLPPSAPPSPPPSSSAWGAAAALEDV-------VGSSYTLRPTTQRLPFPASSLPSSS----------LRPPLPLSKLLFSATVTTNPQKLARLHLSFPRYFSVHGHILDPPPSHALGGDEDEPP----VG---------SGLPSTLREDVVPCTSQNKPLLLLALLLRELRAFASSPPIPPASGPPLVLVFTSSLDSTHRLSRLLQLCTATLQVPENSFALPPSLPPSLPPSRPSTGSSIVGEFSSSLSQPQRAALLQRCLGAAPGEGGKEGGKEGGKEGGVRVLVASDGMARGIDLPNVSAVINYDTPRQVSTYIHRVGRTARAGREGRSFTFLKRGQEKEFERLRRAVGDGGKWREVGRITAGKLGPLEPFLPGYKKALRGLKEVMGWEKGGRLKTTEGMNEGLVRQMLRMDAGLGGNAAGQGKEGEEAGEEEEEEEGEEN 899          
The following BLAST results are available for this feature:
BLAST of NO13G00440.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22881.15.100e-20050.21atp-dependent rna helicase [Nannochloropsis gadita... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO13G00440NO13G00440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO13G00440.1NO13G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO13G00440.1.cds1NO13G00440.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00440.1.cds2NO13G00440.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO13G00440.1.cds3NO13G00440.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO13G00440.1 ID=NO13G00440.1|Name=NO13G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=3237bp
TGTCTCATTCATGAGCTGAAATTCCATTTCTAAGCTAGTGGCGCGATCCC
CCCCTTCTGGTAAGGGGGCAGATACCGAATGGGGACTCTCTTTGTCCATG
TGGCCACGCCCTCTGCCTAAAACCAAGGGCAGTTTCGACCGCTTAACTGT
GTCTCATGCGATGTCCTTCCCCGTCTCTGCACCTCCACCTCTCCACAGGT
ATTCGTCGCAGCCAGCCAATAGGCAGGGGCTGAGCAAACAGTAATTATAT
TATAGCTTTAGTCCCACAAGTGTCCCCACCGTAGAATACGACCCTAGTAG
TATCCTCCCAACCCGCCGCACATTATGTTTGCCATCGAGCGCTTTGTGGC
CACGGAGGAGGGGGGCGGTGAGACGCAGCAGCAGCACGACGTCGACGAGA
AGGAGAAGAAGCAAGACAAGCTCGCACTATACTTGGCGCGGGTGCAGCAG
CGTCGCGGGGACAGGAAAAAGGAGAGCAAGATGAAGCGGAAGCGGGACCT
GAGCGCAACCGGACAGGATGAGACGCAGGAGAAGAAGGGTATCGCACCTA
CATATATACAAGAGGACAAGGAGAAGACCGCGAAGAGAAAGGTGGAGGAA
GAGCATGCCGTGGAGACGTCGGAGGGAAAACAAGGCAAGAAGGACCGGAA
ACGAGAGGAAAGGGAGGAAAGGAAGAAACGTCCACGCACCGAGGACAAGG
CCGAGCAACAAGCTTCCCTCCACTCTTCTCCAACCGCTGCTGCTGAAGCT
CCTTCTCCTTCCTCCTCCTCCACCCCCTCCCCTGCACCTCGTCCCACTCA
ACGTTCCTCAGGCCTGGAAATGATCCGGCGCATGCTCAGCGGGCATATGG
CGAAACCCTCGAGGACTACACAAGCACAATTCACTCCCCCAGGAAAAGCA
GCAGCAGCAGCAGCAGAGACAGTAGAAGCAGCAGCGGCGGAAGTATCAAT
AGCTCCGTCATCGCTAGCTCCTGCAGCAACACCCACAGCAAAAGCAGCAG
TTTCAGTAGCATCATTAGACAATGCCAGAAACGATGAGCATAGGGAAGCA
AAGGCAGAGAAGAAGGAGAAGAATCTGAAGCCCAATAGTGTGCAGCGAAC
ATCGCTCTCTTCCCTCATGGACATGGGCACCACCCCACCTCTTCCTTCTC
CACCTCCGTCCCTCCCTCCCGCAGGCACCATGAGCGTCGCCAACGCTTGC
ACTCAATGGGGACTCGATCCTCGCCTCCTATCCGCCCTCGCCACCCACAA
CATCCGCCATTTCTTTCCTGTCCAAGCCCGCGTCCTCCCCTTTCTCCTCC
CTCCCCCCCTCCCTCCGTCCACCTCCTCCTCCTCCTTCCTCCTCCCGGGG
CGAGACGCCATTGTATGCGCACCAACGGGAAGTGGAAAGACTCTCGTGTA
CGTCCTGACCCTGCTTCAGGCGCTCTCTTCCCGGAGAGTGGGGAGGTTGA
GAGGTCTGGTGCTGGTGCCAACACGCGATCTAGCCATGCAGGTCTTCCGG
GAATTCATGTCCTTAGCACCGAGTGTGGGGGTGACTGTCGCTCTCGTCAT
CGGCCAAACGGATTTCGAGGCCGAGCAGAAGGCCATGCAAGGGAGGAGGG
AGGACGGGAGGGAGGGCCCGAGGGAAGGGTGGGTGGATGTGGTGGTAGCG
ACACCGGGGAGGCTGATGGACCACATGGATAGAACGCGAGGATTTACCCT
CGAGCATTTGAGGTACCTGGTGTTGGATGAGGTGGATAGGCTGGTGAACC
AGTCCTATCAGGGGTGGGCTCAGCGGGTGCATGAGGCGGCGTATGTCCAG
CGACCAGGGACATTTGGCTCCACCGCGCCCTCTCGTCCTGCCTCGTCTAT
TGGGGAGCAAAAAGAGGGGAGGAAAGAGGTGGAGGATGAAGAAATAGAAA
AGGAGGAAGGAGGCAGTACATGCACCAGCTACATCATCCATCCAACCACT
ATCCGTCTCCGGTCCACCCATCATGCCGCCGTCTCCTCCTCCTCCTCCTC
CTCTCCCTCCCTCCAGCCCTTCCTCCAACCCTCTACACCCCTTCGAAAAC
TCCTCTTTTCGGCAACTTTCACCTCCAATCCCCAAAAGCTAGCTCGACTC
AACCTGAGGAATCCCCGGTACTTCTCCATAGATGGTCACGTCATCGACCC
GCCCCCCAATGCCAAGGAGGGGGAGGACGGGGACGAGGGCCCGGAGGAAG
GCTTCATAGGGGAAGAAGGAGGGGAGGGTGAAGCAATCAGTGGCACACCA
GCGACACTCAAGGAGGAGGTAGTGGTCTGTTCGGGGAAGGACAAGCCCCT
CGTCCTCCTTGCCCTTCTCCTCCGTGAACTCCAAGCCTTCTCCTCCCTCC
CTCTCTCCCGCCCTCCCTCCCCCCCTCTCTTGATCCTCATCTTTACCTCC
TCCCTCGACTCCACCCACCGTCTTTGCCGCCTTCTCCAACTCTGCACCGC
CACCATTCAAGTCCCCGAAAATATATTTGCCCTCTCTTCGTCTATTCCTC
CCTCCCTACCTCCCACTCCCCCTGCCCCAGCCAGCAGCATTGTGTGTGAG
TTTTCCTCTTCCCTCTCCCAGCCCCAGCGGGCGGCCCTTCTCCAACGATG
TCTAACGACAGGGGTGGCAGGAAGGGAAGGAGGGGTGAGGGTACTGGTCG
CCTCGGATGGGATGGCACGAGGCATTGACCTTCCCAATGTGACTGCGGTG
GTTAATTATGACTGTCCTCGACAAGCCAAGACGTATATCCATCGGGTGGG
GAGGACGGCGAGAGCGGGGAGGGAGGGCAGGAGTGTGACGTTGTTGAAGC
CGGGGCAGGAGAGGGAGTTTGAGCGGTTGAGGAAGGGGGTGGGGGATGGA
GGGAAGTGGAAGAGGGTGGGGAGGTTTGAGGTCGGGAGGTTGGGAGGGCT
GGAGCCGTTACTGCCCGGTTACAGGAAGGCCCTGAGGGGTTTGAGGGATG
TGATGGGACGGGAGAAGGGGGGGAGGCTGAAGGCGACGGAGGGAATGAGT
GAGGAAGTGGTGAGGGAGGTGCTGAGGTTGGGAGGAGCAAGCGGGGGAGG
GATGGTGAAGGGTCAGGAAGAGGAGGAGGACGAGGACGAGAAGGACGAGA
ATTAGGAGCAAGGTGACGAGTAAACAAAAAGTATAGATAGAAGACTGGAT
TAGTATGATACAACATGCGTCAAAGCACCCACAAAATCAACCAGAAAGAG
ATTTTTCGAAGTAATGCGAAAATCGAGTGACGAGGCT
back to top

protein sequence of NO13G00440.1

>NO13G00440.1-protein ID=NO13G00440.1-protein|Name=NO13G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=927bp
MFAIERFVATEEGGGETQQQHDVDEKEKKQDKLALYLARVQQRRGDRKKE
SKMKRKRDLSATGQDETQEKKGIAPTYIQEDKEKTAKRKVEEEHAVETSE
GKQGKKDRKREEREERKKRPRTEDKAEQQASLHSSPTAAAEAPSPSSSST
PSPAPRPTQRSSGLEMIRRMLSGHMAKPSRTTQAQFTPPGKAAAAAAETV
EAAAAEVSIAPSSLAPAATPTAKAAVSVASLDNARNDEHREAKAEKKEKN
LKPNSVQRTSLSSLMDMGTTPPLPSPPPSLPPAGTMSVANACTQWGLDPR
LLSALATHNIRHFFPVQARVLPFLLPPPLPPSTSSSSFLLPGRDAIVCAP
TGSGKTLVYVLTLLQALSSRRVGRLRGLVLVPTRDLAMQVFREFMSLAPS
VGVTVALVIGQTDFEAEQKAMQGRREDGREGPREGWVDVVVATPGRLMDH
MDRTRGFTLEHLRYLVLDEVDRLVNQSYQGWAQRVHEAAYVQRPGTFGST
APSRPASSIGEQKEGRKEVEDEEIEKEEGGSTCTSYIIHPTTIRLRSTHH
AAVSSSSSSSPSLQPFLQPSTPLRKLLFSATFTSNPQKLARLNLRNPRYF
SIDGHVIDPPPNAKEGEDGDEGPEEGFIGEEGGEGEAISGTPATLKEEVV
VCSGKDKPLVLLALLLRELQAFSSLPLSRPPSPPLLILIFTSSLDSTHRL
CRLLQLCTATIQVPENIFALSSSIPPSLPPTPPAPASSIVCEFSSSLSQP
QRAALLQRCLTTGVAGREGGVRVLVASDGMARGIDLPNVTAVVNYDCPRQ
AKTYIHRVGRTARAGREGRSVTLLKPGQEREFERLRKGVGDGGKWKRVGR
FEVGRLGGLEPLLPGYRKALRGLRDVMGREKGGRLKATEGMSEEVVREVL
RLGGASGGGMVKGQEEEEDEDEKDEN*
back to top

mRNA from alignment at chr13:146169..149809+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO13G00440.1 ID=NO13G00440.1|Name=NO13G00440.1|organism=Nannochloropsis oceanica|type=mRNA|length=3641bp|location=Sequence derived from alignment at chr13:146169..149809+ (Nannochloropsis oceanica)
TGTCTCATTCATGAGCTGAAATTCCATTTCTAAGCTAGTGGCGCGATCCC CCCCTTCTGGTAAGGGGGCAGATACCGAATGGGGACTCTCTTTGTCCATG TGGCCACGCCCTCTGCCTAAAACCAAGGGCAGTTTCGACCGCTTAACTGT GTCTCATGCGATGTCCTTCCCCGTCTCTGCACCTCCACCTCTCCACAGGT ATTCGTCGCAGCCAGCCAATAGGCAGGGGCTGAGCAAACAGTAATTATAT TATAGCTTTAGTCCCACAAGTGTCCCCACCGTAGAATACGACCCTAGTAG TATCCTCCCAACCCGCCGCACATTATGTTTGCCATCGAGCGCTTTGTGGC CACGGAGGAGGGGGGCGGTGAGACGCAGCAGCAGCACGACGTCGACGAGA AGGAGAAGAAGCAAGACAAGCTCGCACTATACTTGGCGCGGGTGCAGCAG CGTCGCGGGGACAGGAAAAAGGAGAGCAAGATGAAGCGGAAGCGGGACCT GAGCGCAACCGGACAGGATGAGACGCAGGAGAAGAAGGGTATCGCACCTA CATATATACAAGAGGACAAGGAGAAGACCGCGAAGAGAAAGGTGGAGGAA GAGCATGCCGTGGAGACGTCGGAGGGAAAACAAGGCAAGGTACGCGTGTG TGGTGGTTAGAGGGAATGCGTCATGGAGGGCTGGAGGGGTGAATGGATTA AGAAACAGTACCAAAAGGAGAAATGTTGCATTATTTCTGGCAGTTGTTTT GACTTTCTTTGAATGAGGTGCTGGCCTGTCTGTCATCGCACGTCGCCCAG GTGCCATCCCTAGCCCTCACGACCTCACCGTTCTCCCACCTACCCCTCCT ATATTAAAACAGAAGGACCGGAAACGAGAGGAAAGGGAGGAAAGGAAGAA ACGTCCACGCACCGAGGACAAGGCCGAGCAACAAGCTTCCCTCCACTCTT CTCCAACCGCTGCTGCTGAAGCTCCTTCTCCTTCCTCCTCCTCCACCCCC TCCCCTGCACCTCGTCCCACTCAACGTTCCTCAGGCCTGGAAATGATCCG GCGCATGCTCAGCGGGCATATGGCGAAACCCTCGAGGACTACACAAGCAC AATTCACTCCCCCAGGAAAAGCAGCAGCAGCAGCAGCAGAGACAGTAGAA GCAGCAGCGGCGGAAGTATCAATAGCTCCGTCATCGCTAGCTCCTGCAGC AACACCCACAGCAAAAGCAGCAGTTTCAGTAGCATCATTAGACAATGCCA GAAACGATGAGCATAGGGAAGCAAAGGCAGAGAAGAAGGAGAAGAATCTG AAGCCCAATAGTGTGCAGCGAACATCGCTCTCTTCCCTCATGGACATGGG CACCACCCCACCTCTTCCTTCTCCACCTCCGTCCCTCCCTCCCGCAGGCA CCATGAGCGTCGCCAACGCTTGCACTCAATGGGGACTCGATCCTCGCCTC CTATCCGCCCTCGCCACCCACAACATCCGCCATTTCTTTCCTGTCCAAGC CCGCGTCCTCCCCTTTCTCCTCCCTCCCCCCCTCCCTCCGTCCACCTCCT CCTCCTCCTTCCTCCTCCCGGGGCGAGACGCCATTGTATGCGCACCAACG GGAAGTGGAAAGACTCTCGTGTACGTCCTGACCCTGCTTCAGGCGCTCTC TTCCCGGAGAGTGGGGAGGTTGAGAGGTCTGGTGCTGGTGCCAACACGCG ATCTAGCCATGCAGGTAGGGAGGGAGGGAGGGAGGAAGCAAAGCGGAGGA AGGCAAAGGGACACGTGGATGCCTGGACCGCGTCAAGCCTTGTCTTTTCT TTTTTACCTTTTGTATTTTTTCACGCCGCCTCCTTTTTGTCTCCCTCCCT CCCTCCCTCCCTCTCTCCCTCCCTAATTCGCTATCCCTTCCTCAGGTCTT CCGGGAATTCATGTCCTTAGCACCGAGTGTGGGGGTGACTGTCGCTCTCG TCATCGGCCAAACGGATTTCGAGGCCGAGCAGAAGGCCATGCAAGGGAGG AGGGAGGACGGGAGGGAGGGCCCGAGGGAAGGGTGGGTGGATGTGGTGGT AGCGACACCGGGGAGGCTGATGGACCACATGGATAGAACGCGAGGATTTA CCCTCGAGCATTTGAGGTACCTGGTGTTGGATGAGGTGGATAGGCTGGTG AACCAGTCCTATCAGGGGTGGGCTCAGCGGGTGCATGAGGCGGCGTATGT CCAGCGACCAGGGACATTTGGCTCCACCGCGCCCTCTCGTCCTGCCTCGT CTATTGGGGAGCAAAAAGAGGGGAGGAAAGAGGTGGAGGATGAAGAAATA GAAAAGGAGGAAGGAGGCAGTACATGCACCAGCTACATCATCCATCCAAC CACTATCCGTCTCCGGTCCACCCATCATGCCGCCGTCTCCTCCTCCTCCT CCTCCTCTCCCTCCCTCCAGCCCTTCCTCCAACCCTCTACACCCCTTCGA AAACTCCTCTTTTCGGCAACTTTCACCTCCAATCCCCAAAAGCTAGCTCG ACTCAACCTGAGGAATCCCCGGTACTTCTCCATAGATGGTCACGTCATCG ACCCGCCCCCCAATGCCAAGGAGGGGGAGGACGGGGACGAGGGCCCGGAG GAAGGCTTCATAGGGGAAGAAGGAGGGGAGGGTGAAGCAATCAGTGGCAC ACCAGCGACACTCAAGGAGGAGGTAGTGGTCTGTTCGGGGAAGGACAAGC CCCTCGTCCTCCTTGCCCTTCTCCTCCGTGAACTCCAAGCCTTCTCCTCC CTCCCTCTCTCCCGCCCTCCCTCCCCCCCTCTCTTGATCCTCATCTTTAC CTCCTCCCTCGACTCCACCCACCGTCTTTGCCGCCTTCTCCAACTCTGCA CCGCCACCATTCAAGTCCCCGAAAATATATTTGCCCTCTCTTCGTCTATT CCTCCCTCCCTACCTCCCACTCCCCCTGCCCCAGCCAGCAGCATTGTGTG TGAGTTTTCCTCTTCCCTCTCCCAGCCCCAGCGGGCGGCCCTTCTCCAAC GATGTCTAACGACAGGGGTGGCAGGAAGGGAAGGAGGGGTGAGGGTACTG GTCGCCTCGGATGGGATGGCACGAGGCATTGACCTTCCCAATGTGACTGC GGTGGTTAATTATGACTGTCCTCGACAAGCCAAGACGTATATCCATCGGG TGGGGAGGACGGCGAGAGCGGGGAGGGAGGGCAGGAGTGTGACGTTGTTG AAGCCGGGGCAGGAGAGGGAGTTTGAGCGGTTGAGGAAGGGGGTGGGGGA TGGAGGGAAGTGGAAGAGGGTGGGGAGGTTTGAGGTCGGGAGGTTGGGAG GGCTGGAGCCGTTACTGCCCGGTTACAGGAAGGCCCTGAGGGGTTTGAGG GATGTGATGGGACGGGAGAAGGGGGGGAGGCTGAAGGCGACGGAGGGAAT GAGTGAGGAAGTGGTGAGGGAGGTGCTGAGGTTGGGAGGAGCAAGCGGGG GAGGGATGGTGAAGGGTCAGGAAGAGGAGGAGGACGAGGACGAGAAGGAC GAGAATTAGGAGCAAGGTGACGAGTAAACAAAAAGTATAGATAGAAGACT GGATTAGTATGATACAACATGCGTCAAAGCACCCACAAAATCAACCAGAA AGAGATTTTTCGAAGTAATGCGAAAATCGAGTGACGAGGCT
back to top

Coding sequence (CDS) from alignment at chr13:146169..149809+

>NO13G00440.1 ID=NO13G00440.1|Name=NO13G00440.1|organism=Nannochloropsis oceanica|type=CDS|length=2781bp|location=Sequence derived from alignment at chr13:146169..149809+ (Nannochloropsis oceanica)
ATGTTTGCCATCGAGCGCTTTGTGGCCACGGAGGAGGGGGGCGGTGAGAC
GCAGCAGCAGCACGACGTCGACGAGAAGGAGAAGAAGCAAGACAAGCTCG
CACTATACTTGGCGCGGGTGCAGCAGCGTCGCGGGGACAGGAAAAAGGAG
AGCAAGATGAAGCGGAAGCGGGACCTGAGCGCAACCGGACAGGATGAGAC
GCAGGAGAAGAAGGGTATCGCACCTACATATATACAAGAGGACAAGGAGA
AGACCGCGAAGAGAAAGGTGGAGGAAGAGCATGCCGTGGAGACGTCGGAG
GGAAAACAAGGCAAGAAGGACCGGAAACGAGAGGAAAGGGAGGAAAGGAA
GAAACGTCCACGCACCGAGGACAAGGCCGAGCAACAAGCTTCCCTCCACT
CTTCTCCAACCGCTGCTGCTGAAGCTCCTTCTCCTTCCTCCTCCTCCACC
CCCTCCCCTGCACCTCGTCCCACTCAACGTTCCTCAGGCCTGGAAATGAT
CCGGCGCATGCTCAGCGGGCATATGGCGAAACCCTCGAGGACTACACAAG
CACAATTCACTCCCCCAGGAAAAGCAGCAGCAGCAGCAGCAGAGACAGTA
GAAGCAGCAGCGGCGGAAGTATCAATAGCTCCGTCATCGCTAGCTCCTGC
AGCAACACCCACAGCAAAAGCAGCAGTTTCAGTAGCATCATTAGACAATG
CCAGAAACGATGAGCATAGGGAAGCAAAGGCAGAGAAGAAGGAGAAGAAT
CTGAAGCCCAATAGTGTGCAGCGAACATCGCTCTCTTCCCTCATGGACAT
GGGCACCACCCCACCTCTTCCTTCTCCACCTCCGTCCCTCCCTCCCGCAG
GCACCATGAGCGTCGCCAACGCTTGCACTCAATGGGGACTCGATCCTCGC
CTCCTATCCGCCCTCGCCACCCACAACATCCGCCATTTCTTTCCTGTCCA
AGCCCGCGTCCTCCCCTTTCTCCTCCCTCCCCCCCTCCCTCCGTCCACCT
CCTCCTCCTCCTTCCTCCTCCCGGGGCGAGACGCCATTGTATGCGCACCA
ACGGGAAGTGGAAAGACTCTCGTGTACGTCCTGACCCTGCTTCAGGCGCT
CTCTTCCCGGAGAGTGGGGAGGTTGAGAGGTCTGGTGCTGGTGCCAACAC
GCGATCTAGCCATGCAGGTCTTCCGGGAATTCATGTCCTTAGCACCGAGT
GTGGGGGTGACTGTCGCTCTCGTCATCGGCCAAACGGATTTCGAGGCCGA
GCAGAAGGCCATGCAAGGGAGGAGGGAGGACGGGAGGGAGGGCCCGAGGG
AAGGGTGGGTGGATGTGGTGGTAGCGACACCGGGGAGGCTGATGGACCAC
ATGGATAGAACGCGAGGATTTACCCTCGAGCATTTGAGGTACCTGGTGTT
GGATGAGGTGGATAGGCTGGTGAACCAGTCCTATCAGGGGTGGGCTCAGC
GGGTGCATGAGGCGGCGTATGTCCAGCGACCAGGGACATTTGGCTCCACC
GCGCCCTCTCGTCCTGCCTCGTCTATTGGGGAGCAAAAAGAGGGGAGGAA
AGAGGTGGAGGATGAAGAAATAGAAAAGGAGGAAGGAGGCAGTACATGCA
CCAGCTACATCATCCATCCAACCACTATCCGTCTCCGGTCCACCCATCAT
GCCGCCGTCTCCTCCTCCTCCTCCTCCTCTCCCTCCCTCCAGCCCTTCCT
CCAACCCTCTACACCCCTTCGAAAACTCCTCTTTTCGGCAACTTTCACCT
CCAATCCCCAAAAGCTAGCTCGACTCAACCTGAGGAATCCCCGGTACTTC
TCCATAGATGGTCACGTCATCGACCCGCCCCCCAATGCCAAGGAGGGGGA
GGACGGGGACGAGGGCCCGGAGGAAGGCTTCATAGGGGAAGAAGGAGGGG
AGGGTGAAGCAATCAGTGGCACACCAGCGACACTCAAGGAGGAGGTAGTG
GTCTGTTCGGGGAAGGACAAGCCCCTCGTCCTCCTTGCCCTTCTCCTCCG
TGAACTCCAAGCCTTCTCCTCCCTCCCTCTCTCCCGCCCTCCCTCCCCCC
CTCTCTTGATCCTCATCTTTACCTCCTCCCTCGACTCCACCCACCGTCTT
TGCCGCCTTCTCCAACTCTGCACCGCCACCATTCAAGTCCCCGAAAATAT
ATTTGCCCTCTCTTCGTCTATTCCTCCCTCCCTACCTCCCACTCCCCCTG
CCCCAGCCAGCAGCATTGTGTGTGAGTTTTCCTCTTCCCTCTCCCAGCCC
CAGCGGGCGGCCCTTCTCCAACGATGTCTAACGACAGGGGTGGCAGGAAG
GGAAGGAGGGGTGAGGGTACTGGTCGCCTCGGATGGGATGGCACGAGGCA
TTGACCTTCCCAATGTGACTGCGGTGGTTAATTATGACTGTCCTCGACAA
GCCAAGACGTATATCCATCGGGTGGGGAGGACGGCGAGAGCGGGGAGGGA
GGGCAGGAGTGTGACGTTGTTGAAGCCGGGGCAGGAGAGGGAGTTTGAGC
GGTTGAGGAAGGGGGTGGGGGATGGAGGGAAGTGGAAGAGGGTGGGGAGG
TTTGAGGTCGGGAGGTTGGGAGGGCTGGAGCCGTTACTGCCCGGTTACAG
GAAGGCCCTGAGGGGTTTGAGGGATGTGATGGGACGGGAGAAGGGGGGGA
GGCTGAAGGCGACGGAGGGAATGAGTGAGGAAGTGGTGAGGGAGGTGCTG
AGGTTGGGAGGAGCAAGCGGGGGAGGGATGGTGAAGGGTCAGGAAGAGGA
GGAGGACGAGGACGAGAAGGACGAGAATTAG
back to top
Synonyms
Publications