NO13G00280, NO13G00280 (gene) Nannochloropsis oceanica

Overview
NameNO13G00280
Unique NameNO13G00280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2418
Alignment locationchr13:100804..103221 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin thioesterase otub1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:100804..103221 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR003323OTU_dom
IPR019400Peptidase_C65_otubain
Homology
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_005854660.1 (ubiquitin thioesterase otub1 [Nannochloropsis gaditana CCMP526] >EKU21705.1 ubiquitin thioesterase otub1 [Nannochloropsis gaditana CCMP526] >EWM22878.1 ubiquitin thioesterase otub1 [Nannochloropsis gaditana] >EWM22879.1 ubiquitin thioesterase otub1 [Nannochloropsis gaditana])

HSP 1 Score: 371.3 bits (952), Expect = 3.300e-99
Identity = 189/290 (65.17%), Postives = 222/290 (76.55%), Query Frame = 0
Query:   79 AVDAESNGHDDLHPAMLNQQDDAAVAEQDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGK---------------KKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPE--GGGREGG 352
            A D   NG      A  N Q +    ++D LT+AQQEEI+SQIAA+QPLVG LEPPS+LL  YKDNP KGFV GVEDLA+RY  MRR+R DGNCFYRAFLFAYLAGLVE G+ +G K               +KKEW++ ++TVKDSK WL+ VG+EEVAID+FWEVFVEELE LP K+L+DLE+TFN+PHGVASYMVWYCRLLT+G+LKKH+EEYEAFLD  Y DM+DFC REVEP GKECE++QI+AL+R L   V IEYLDGR LP GG LP HVLP+   GG+E G
Sbjct:   13 AEDVHENGLSQSQAAGHNHQVE---EDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGXXXXXXXGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEG 299          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: CBN78094.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 230.7 bits (587), Expect = 7.000e-57
Identity = 120/247 (48.58%), Postives = 160/247 (64.78%), Query Frame = 0
Query:  103 VAEQDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEG--GVGEGGKKKK-EWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEGG 347
            +A+Q+  T+ QQ  I + I ATQP VGA E    LLP+Y+ NP  GF  GV+DL +RY  +RRVRGDGNCFYR+FLF YL  L++G   VG+   K   E  +L + V DSK  L+ +G+EEVA+D FW+ F++EL+ LP   +  LE  F +  G   Y+VWYCR+LT+GFLK + + +  FL+    DM DFC REVEP+GKECE++QI+ L   L+  V IEYLDG+     G L    LP+ G
Sbjct:   32 LAKQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSVGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLE-HTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDF--SGQLGSITLPDTG 275          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: GAY03957.1 (ubiquitin thioesterase otubain putative [Pythium insidiosum])

HSP 1 Score: 173.3 bits (438), Expect = 1.300e-39
Identity = 86/205 (41.95%), Postives = 124/205 (60.49%), Query Frame = 0
Query:  126 PLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDG 329
            PLVG   P   L  +++ N    F+ G+  L + Y  MRRVR DGNCF+R F+FA    LV     +  K      ++  T++ SK  LV +G+ EVAID FWE FV  L+ +  +T ++L   F    G + Y+VWY RLLTAG+LK++ E+++ F++G +  ++   FCA EVEP+GKEC++ Q++AL   L   V IEYLDG
Sbjct:    8 PLVGERAPVLELRKEFEGNAXPNFLHGITALDRHYEAMRRVRRDGNCFFRGFIFALCEQLVSRDDADAEKAAALLARIQNTIRKSKAELVAIGYXEVAIDTFWETFVXYLDAMETRTHSELVXDFGTEGGESEYLVWYMRLLTAGYLKRNSEQFQPFIEGLHPGLSVEQFCAAEVEPMGKECDQPQVIALTEALQVGVKIEYLDG 212          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_008903167.1 (hypothetical protein PPTG_10258 [Phytophthora parasitica INRA-310] >ETN11360.1 hypothetical protein PPTG_10258 [Phytophthora parasitica INRA-310] >ETP20691.1 hypothetical protein F441_05663 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 168.3 bits (425), Expect = 4.300e-38
Identity = 86/199 (43.22%), Postives = 117/199 (58.79%), Query Frame = 0
Query:  137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLP 333
            L  +Y  N    F+ G++ L  RY  +RRVRGDGNCF+R F+FA    L+  GG G          ++   ++ SK  LV +G+ +VAID FWE FV+ L  +  ++ A+L   F    G + Y+VWY RLLTAG++KK+ E ++ F+DG Y       FCA EVEP+GKEC++ QI AL   L   V IEYLDG   P
Sbjct:   28 LKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGP 226          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: KUF85402.1 (Ubiquitin thioesterase otubain [Phytophthora nicotianae])

HSP 1 Score: 168.3 bits (425), Expect = 4.300e-38
Identity = 86/199 (43.22%), Postives = 117/199 (58.79%), Query Frame = 0
Query:  137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLP 333
            L  +Y  N    F+ G++ L  RY  +RRVRGDGNCF+R F+FA    L+  GG G          ++   ++ SK  LV +G+ +VAID FWE FV+ L  +  ++ A+L   F    G + Y+VWY RLLTAG++KK+ E ++ F+DG Y       FCA EVEP+GKEC++ QI AL   L   V IEYLDG   P
Sbjct:    6 LKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGP 204          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: ETI50921.1 (hypothetical protein F443_05655 [Phytophthora parasitica P1569])

HSP 1 Score: 167.2 bits (422), Expect = 9.500e-38
Identity = 85/199 (42.71%), Postives = 117/199 (58.79%), Query Frame = 0
Query:  137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLP 333
            L  +Y  N    F+ G++ L  RY  +RRVRGDGNCF+R F+FA    L+  GG G          ++   ++ SK  L+ +G+ +VAID FWE FV+ L  +  ++ A+L   F    G + Y+VWY RLLTAG++KK+ E ++ F+DG Y       FCA EVEP+GKEC++ QI AL   L   V IEYLDG   P
Sbjct:   28 LKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSKNELMAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGP 226          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: OWZ08759.1 (Ubiquitin thioesterase otubain [Phytophthora megakarya])

HSP 1 Score: 166.8 bits (421), Expect = 1.200e-37
Identity = 84/195 (43.08%), Postives = 118/195 (60.51%), Query Frame = 0
Query:  137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDG 329
            L  +Y  N    F+ G+E L  RY  +RRVRGDGNCF+R F+FA    L+  GGV +     +   ++   ++ SK  LV +G+ +VAID FWE FV+ L  +  ++ A+L   F    G + Y+VWY RLLTAG++K+H + ++ F+DG +       FCA EVEP+GKEC++ QI AL   L   V IEYLDG
Sbjct:    6 LKAEYVGNANANFMHGIESLNVRYEALRRVRGDGNCFFRGFIFALCERLLPSGGVEDSNAALRR--RIQHKIQTSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKQHADTFQPFIDGLFPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDG 198          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_013187270.1 (PREDICTED: ubiquitin thioesterase otubain-like [Amyelois transitella])

HSP 1 Score: 157.1 bits (396), Expect = 9.800e-35
Identity = 92/250 (36.80%), Postives = 146/250 (58.40%), Query Frame = 0
Query:  106 QDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEAT----------FNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEG 346
            QD L M QQ EIE +I+ + PLVG LEP S L  +Y ++P   ++  V+DL+ +Y+ +RR R DGNCF+RAF +AYL  L+        K K E++K  +  K+SK  LV +GF +  ++ F+E F+E ++ + ++     E T          FN   G + Y+V Y RL+T+G L+  ++ Y+ F++G  T + +FC +EVEP+ KE + + I+AL   L+  V ++Y+D     +G  +  H  PEG
Sbjct:   22 QDELIMKQQREIEKEISESIPLVGELEPLSSLEKEYNEDPV--YLMKVKDLSSKYKHIRRTRPDGNCFFRAFSYAYLEHLL--------KDKAEYEKFYEIAKNSKEILVALGFSQFTVEDFYETFMEVVQRVGEQAGGSPEGTEEIRLELHDKFN-KQGYSDYIVVYLRLVTSGQLQTQQDFYQNFIEGPRT-VTEFCRQEVEPMYKESDHIHIIALSNALNVGVRVKYMD---RGEGSQVIAHDFPEG 256          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: KFB39861.1 (AGAP009507-PA-like protein [Anopheles sinensis])

HSP 1 Score: 156.8 bits (395), Expect = 1.300e-34
Identity = 93/250 (37.20%), Postives = 142/250 (56.80%), Query Frame = 0
Query:  102 AVAEQDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQK------TLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEG 346
            +V  QD L + QQ EIE +IA T PLV   +  S L  +Y D+P   +++ ++DL+ +YR +RR R DGNCF+RAF +AYL  LV          K E+ K  +    S+  L E GF    I+ F+E F+E + ++  +       LA+L   FN+  G + Y+V Y RL+T+  L++  + Y+ F+DG  T + +FC +EVEP+ KE + + I+A+   LDA V +EY+D     DG  +  H  P+G
Sbjct:   18 SVENQDELIIKQQREIEQEIAHTNPLVSESQEISSLNQEYLDDPV--YISKIKDLSSKYRAIRRSRPDGNCFFRAFAYAYLEYLV--------LNKSEFQKFYEYASKSRERLTEAGFPPFTIEDFYETFMEVINKVKPEGDDTTSALAELHKLFNE-QGYSDYVVVYLRLITSSHLQEKADFYQNFIDGNIT-IVEFCHQEVEPMYKESDHIHIIAICSALDAGVRVEYMD---RGDGNQVIAHDFPDG 252          
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_022097922.1 (ubiquitin thioesterase OTUB1-like [Acanthaster planci])

HSP 1 Score: 156.4 bits (394), Expect = 1.700e-34
Identity = 101/260 (38.85%), Postives = 146/260 (56.15%), Query Frame = 0
Query:   97 QQDDAAVAEQD----------RLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLAD-LEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEG 346
            Q D + VA+QD             +AQQE I+++I    PLV    P SVL  +Y D+    + A +EDL+ +Y  +R+ RGDGNCF+RAF FAYL  L+          KKE  +L    + SK  LV +GF    I  F E F+E ++++ Q+   D L  TF D  G++ Y+V Y RLLT+G L+++ E YE F++G  T + +FC REVEP+ +E + + I+AL   LD  V + YLD     +GG +  H  P+G
Sbjct:    7 QPDASGVADQDTEELTGMAREEAIIAQQERIQNEIKENCPLVSDRYPISVLFDEYLDDAV--YKAKIEDLSMQYSHIRKTRGDGNCFFRAFGFAYLERLL--------TDKKELKRLKTAAEMSKDQLVSLGFPSFTITDFHETFMEVIQQVEQQPEVDELVDTFRD-QGISDYIVVYLRLLTSGQLQQNAEFYENFIEGGRT-VKEFCRREVEPMARESDHIHIIALTSALDVGVRVVYLD---RGEGGKVIPHDFPDG 251          
The following BLAST results are available for this feature:
BLAST of NO13G00280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854660.13.300e-9965.17ubiquitin thioesterase otub1 [Nannochloropsis gadi... [more]
CBN78094.17.000e-5748.58conserved unknown protein [Ectocarpus siliculosus][more]
GAY03957.11.300e-3941.95ubiquitin thioesterase otubain putative [Pythium i... [more]
XP_008903167.14.300e-3843.22hypothetical protein PPTG_10258 [Phytophthora para... [more]
KUF85402.14.300e-3843.22Ubiquitin thioesterase otubain [Phytophthora nicot... [more]
ETI50921.19.500e-3842.71hypothetical protein F443_05655 [Phytophthora para... [more]
OWZ08759.11.200e-3743.08Ubiquitin thioesterase otubain [Phytophthora megak... [more]
XP_013187270.19.800e-3536.80PREDICTED: ubiquitin thioesterase otubain-like [Am... [more]
KFB39861.11.300e-3437.20AGAP009507-PA-like protein [Anopheles sinensis][more]
XP_022097922.11.700e-3438.85ubiquitin thioesterase OTUB1-like [Acanthaster pla... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL134nonsL134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL133nonsL133Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR026ncniR026Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR057ngnoR057Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001870NSK001870Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00280.1NO13G00280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530689gene_6989Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00280.1NO13G00280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00280 ID=NO13G00280|Name=NO13G00280|organism=Nannochloropsis oceanica|type=gene|length=2418bp
GTATGGGGAGGATCTTGCTCGACCTGGCGGCAGGGCTAGAAAGCCTCGTC
CTTGATTTTCTTGCTAACGTCATGAGACACACATAAAGGTGGCTGATGTT
GCCGTTCGCGGGTGGACATTAAAAGGAGACGGGAAGCACGCAACACAAAA
AAGGCGTGCGGTAAAAATCATGCGTGAGGTGTCACAGACGTGAGTTCTTG
CAGCCCCATGAATTGCGGCTCATTAAAAATGTACCATGCCACGAAATACT
CTTCTTTCAGGCGTGGCTTTCCTCTCATTGCAACCAAGCCATGTCCGTGT
CTAGCTGTCTTCGTGGTGCATGCGCGAGTGTTTCATGCTTGAGCTTGATG
TTCAACGCCGCGAGAGTCGCCCATCGTCGCTCTGGGCATTATTCTTCCTT
TAGAAATGCCCTAACTACCTCAATCCCGCACACACTAAATAAGCACATAG
AAAACAGTGGTAGAGCAGCCAGCATGGGTGGAGAGGTTCCTCAATCCACC
AGGCCGACTACCACGCCCAGCACTGCCGTCGACGCCGAGAGCAATGGCCA
CGACGATCTTCACCCTGCCATGCTTAATCAACAGGATGACGCTGCCGTGG
CGGAACAAGACCGCTTGACCATGGCTCAGCAAGAAGAGATAGAAAGTCAA
ATTGCAGCTACACAGCCTTTGGTGGGGGCGCTGGAGCCACCATCCGTCTT
GCTGCCCGATTACAAAGATAACCCTGCGAAAGGATTTGTAGCGGGCGTGG
AGGACCTGGCGCAGCGGTACCGAATGATGCGGCGTGTCCGCGGGGATGGG
AACTGCTTCTACCGTGCTTTTTTGTTTGCCTACCTAGCTGGGCTGGTGGA
GGGAGGGGTGGGGGAGGGAGGGAAGAAAAAGAAAGAGTGGGATAAGCTGG
CCAAGACGGTGAAGGATAGCAAGGGATGGTTGGTGGAGGTGGGGTTTGAG
GAGGTTGCTATTGACATGTTCTGGGAGGTTTTTGTGGAAGAGgtaagatg
gggaaaggagtttgaaactcccaaccaataagcaacccaccacccactca
cacacgggtatacccctcccctcgttcctccccactccctccctcctctc
ctccctcctcctctccctccttccacccctccttcagCTGGAAGAGCTTC
CCCAAAAGACACTCGCCGATCTGGAGGCGACATTTAACGACCCTCACGGC
GTGGCATCTTACATGGTCTGGTACTGCCGTCTCTTGACCGCAGGCTTTCT
GAAGAAGCACCGGGAGGAATACGAGGCTTTCCTGGATGGCCGgtagggag
ggagggagggagggagggagggagggtgggaagagcaaggcatatcaccg
gttctcagaagcgtcgacttggtgagaggtagagagagactgaagagggt
aggtgtacgacgtaaggagaggatgtgagccaattgcgttaccgtgtaca
agctcttaccactttagacacctacctctctgtctctctctgtctctctc
tatctgtctgtctctttctctgtctctgtccctcttttatctccctctct
ctgtctatctctgtccctctttttatcttcctctctgtctctccctgtct
ctccctgtctctctctgtctctctctctctctgtctctatgtctttgtct
ctgtctctctttttatctccctctctctgtctctcttttaatctccctct
ctctgtctctctctgtctctctctgtctctctctgtctctctttttatct
ctgtctctctgtctctctgtctctctgtctctctctctctctctcttttc
atctctctctcttttcatctctctctcattttctcatctctctctctctt
catctccctcttcctctctctctctgtctctgtctctatctctctctctt
cctcactctctcttcacagCTACACCGACATGAACGACTTCTGCGCCCGG
GAAGTAGAGCCCGTAGGGAAGGAGTGCGAGGAACTGCAGATAGTGGCCTT
GATGCGCGTTTTGGACGCCCAGGTCCATATCGAATACCTGGACGGGAGGC
CTCTGCCGGATGGAGGGCATTTGCCTGTGCATGTCCTGCCGGAGGGAGGG
GGGAGGGAGGGGGGGAGGGAGGGGGGGTAACGCTGTTGTACCGCCCAGGA
CATTATGACGTGTTGTCGGCGTGAGAAGACCGAGTGGGGACCGCGGGCTT
GTCCCGAGTCGAAGCCGAGGTAGGAGGGGGCTAAGATGTGTGTGTAGAGA
GGGGGGGGATGATTATGACGAGACGATGCGCAGGCGTAGACAGAGGAGTA
CAGGCGGAGCATGTGATAAAGGCATGCAGTGCCCCCAGCAAATCCCCCGC
CGGGCCGTGAACAAATCCGTGGTAATAGAGGAAGCACCAAAGCATAAGCA
CCTTCGATTCGATACTGA
back to top

protein sequence of NO13G00280.1

>NO13G00280.1-protein ID=NO13G00280.1-protein|Name=NO13G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=356bp
MSVSSCLRGACASVSCLSLMFNAARVAHRRSGHYSSFRNALTTSIPHTLN
KHIENSGRAASMGGEVPQSTRPTTTPSTAVDAESNGHDDLHPAMLNQQDD
AAVAEQDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFV
AGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEW
DKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATF
NDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEP
VGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEGGGREG
GREGG*
back to top
Synonyms
Publications