NO13G00280, NO13G00280 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_005854660.1 (ubiquitin thioesterase otub1 [Nannochloropsis gaditana CCMP526] >EKU21705.1 ubiquitin thioesterase otub1 [Nannochloropsis gaditana CCMP526] >EWM22878.1 ubiquitin thioesterase otub1 [Nannochloropsis gaditana] >EWM22879.1 ubiquitin thioesterase otub1 [Nannochloropsis gaditana]) HSP 1 Score: 371.3 bits (952), Expect = 3.300e-99 Identity = 189/290 (65.17%), Postives = 222/290 (76.55%), Query Frame = 0 Query: 79 AVDAESNGHDDLHPAMLNQQDDAAVAEQDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGK---------------KKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPE--GGGREGG 352 A D NG A N Q + ++D LT+AQQEEI+SQIAA+QPLVG LEPPS+LL YKDNP KGFV GVEDLA+RY MRR+R DGNCFYRAFLFAYLAGLVE G+ +G K +KKEW++ ++TVKDSK WL+ VG+EEVAID+FWEVFVEELE LP K+L+DLE+TFN+PHGVASYMVWYCRLLT+G+LKKH+EEYEAFLD Y DM+DFC REVEP GKECE++QI+AL+R L V IEYLDGR LP GG LP HVLP+ GG+E G Sbjct: 13 AEDVHENGLSQSQAAGHNHQVE---EDRDLLTIAQQEEIDSQIAASQPLVGPLEPPSMLLQAYKDNPEKGFVEGVEDLARRYARMRRIRRDGNCFYRAFLFAYLAGLVEEGIEDGRKGEEKEGGXXXXXXXGRKKEWERFSQTVKDSKAWLLTVGYEEVAIDIFWEVFVEELEALPHKSLSDLESTFNEPHGVASYMVWYCRLLTSGYLKKHKEEYEAFLDASYRDMDDFCVREVEPTGKECEQVQIMALVRALGVCVRIEYLDGRALPPGGQLPCHVLPDEWDGGKEEG 299
BLAST of NO13G00280 vs. NCBI_GenBank
Match: CBN78094.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 230.7 bits (587), Expect = 7.000e-57 Identity = 120/247 (48.58%), Postives = 160/247 (64.78%), Query Frame = 0 Query: 103 VAEQDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEG--GVGEGGKKKK-EWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEGG 347 +A+Q+ T+ QQ I + I ATQP VGA E LLP+Y+ NP GF GV+DL +RY +RRVRGDGNCFYR+FLF YL L++G VG+ K E +L + V DSK L+ +G+EEVA+D FW+ F++EL+ LP + LE F + G Y+VWYCR+LT+GFLK + + + FL+ DM DFC REVEP+GKECE++QI+ L L+ V IEYLDG+ G L LP+ G Sbjct: 32 LAKQNEQTVEQQNAINATIKATQPKVGAKEEVDALLPEYEGNPKPGFRKGVQDLGKRYSALRRVRGDGNCFYRSFLFGYLERLLQGIKSVGDANTKAMLELSRLRQVVHDSKAALIALGYEEVALDDFWQTFLQELDALPNMEMGQLEINFREEAGPCEYIVWYCRMLTSGFLKLNADRFLPFLE-HTVDMQDFCQREVEPMGKECEQIQIMGLCEHLNTPVKIEYLDGQDF--SGQLGSITLPDTG 275
BLAST of NO13G00280 vs. NCBI_GenBank
Match: GAY03957.1 (ubiquitin thioesterase otubain putative [Pythium insidiosum]) HSP 1 Score: 173.3 bits (438), Expect = 1.300e-39 Identity = 86/205 (41.95%), Postives = 124/205 (60.49%), Query Frame = 0 Query: 126 PLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDG 329 PLVG P L +++ N F+ G+ L + Y MRRVR DGNCF+R F+FA LV + K ++ T++ SK LV +G+ EVAID FWE FV L+ + +T ++L F G + Y+VWY RLLTAG+LK++ E+++ F++G + ++ FCA EVEP+GKEC++ Q++AL L V IEYLDG Sbjct: 8 PLVGERAPVLELRKEFEGNAXPNFLHGITALDRHYEAMRRVRRDGNCFFRGFIFALCEQLVSRDDADAEKAAALLARIQNTIRKSKAELVAIGYXEVAIDTFWETFVXYLDAMETRTHSELVXDFGTEGGESEYLVWYMRLLTAGYLKRNSEQFQPFIEGLHPGLSVEQFCAAEVEPMGKECDQPQVIALTEALQVGVKIEYLDG 212
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_008903167.1 (hypothetical protein PPTG_10258 [Phytophthora parasitica INRA-310] >ETN11360.1 hypothetical protein PPTG_10258 [Phytophthora parasitica INRA-310] >ETP20691.1 hypothetical protein F441_05663 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 168.3 bits (425), Expect = 4.300e-38 Identity = 86/199 (43.22%), Postives = 117/199 (58.79%), Query Frame = 0 Query: 137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLP 333 L +Y N F+ G++ L RY +RRVRGDGNCF+R F+FA L+ GG G ++ ++ SK LV +G+ +VAID FWE FV+ L + ++ A+L F G + Y+VWY RLLTAG++KK+ E ++ F+DG Y FCA EVEP+GKEC++ QI AL L V IEYLDG P Sbjct: 28 LKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGP 226
BLAST of NO13G00280 vs. NCBI_GenBank
Match: KUF85402.1 (Ubiquitin thioesterase otubain [Phytophthora nicotianae]) HSP 1 Score: 168.3 bits (425), Expect = 4.300e-38 Identity = 86/199 (43.22%), Postives = 117/199 (58.79%), Query Frame = 0 Query: 137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLP 333 L +Y N F+ G++ L RY +RRVRGDGNCF+R F+FA L+ GG G ++ ++ SK LV +G+ +VAID FWE FV+ L + ++ A+L F G + Y+VWY RLLTAG++KK+ E ++ F+DG Y FCA EVEP+GKEC++ QI AL L V IEYLDG P Sbjct: 6 LKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGP 204
BLAST of NO13G00280 vs. NCBI_GenBank
Match: ETI50921.1 (hypothetical protein F443_05655 [Phytophthora parasitica P1569]) HSP 1 Score: 167.2 bits (422), Expect = 9.500e-38 Identity = 85/199 (42.71%), Postives = 117/199 (58.79%), Query Frame = 0 Query: 137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLP 333 L +Y N F+ G++ L RY +RRVRGDGNCF+R F+FA L+ GG G ++ ++ SK L+ +G+ +VAID FWE FV+ L + ++ A+L F G + Y+VWY RLLTAG++KK+ E ++ F+DG Y FCA EVEP+GKEC++ QI AL L V IEYLDG P Sbjct: 28 LKAEYVGNANPNFMHGIDSLNARYEALRRVRGDGNCFFRGFIFALCEQLLPTGGAGGEDSNAALRSRIQDKIQMSKNELMAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKKNAETFQPFIDGLYPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDGSAGP 226
BLAST of NO13G00280 vs. NCBI_GenBank
Match: OWZ08759.1 (Ubiquitin thioesterase otubain [Phytophthora megakarya]) HSP 1 Score: 166.8 bits (421), Expect = 1.200e-37 Identity = 84/195 (43.08%), Postives = 118/195 (60.51%), Query Frame = 0 Query: 137 LLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLV-EGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMN--DFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDG 329 L +Y N F+ G+E L RY +RRVRGDGNCF+R F+FA L+ GGV + + ++ ++ SK LV +G+ +VAID FWE FV+ L + ++ A+L F G + Y+VWY RLLTAG++K+H + ++ F+DG + FCA EVEP+GKEC++ QI AL L V IEYLDG Sbjct: 6 LKAEYVGNANANFMHGIESLNVRYEALRRVRGDGNCFFRGFIFALCERLLPSGGVEDSNAALRR--RIQHKIQTSKSELVAIGYSDVAIDAFWETFVDYLAAMETRSHAELVQDFQTEGGESEYLVWYMRLLTAGYMKQHADTFQPFIDGLFPGQTVAQFCAAEVEPMGKECDQPQIAALTEALQVGVKIEYLDG 198
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_013187270.1 (PREDICTED: ubiquitin thioesterase otubain-like [Amyelois transitella]) HSP 1 Score: 157.1 bits (396), Expect = 9.800e-35 Identity = 92/250 (36.80%), Postives = 146/250 (58.40%), Query Frame = 0 Query: 106 QDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLADLEAT----------FNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEG 346 QD L M QQ EIE +I+ + PLVG LEP S L +Y ++P ++ V+DL+ +Y+ +RR R DGNCF+RAF +AYL L+ K K E++K + K+SK LV +GF + ++ F+E F+E ++ + ++ E T FN G + Y+V Y RL+T+G L+ ++ Y+ F++G T + +FC +EVEP+ KE + + I+AL L+ V ++Y+D +G + H PEG Sbjct: 22 QDELIMKQQREIEKEISESIPLVGELEPLSSLEKEYNEDPV--YLMKVKDLSSKYKHIRRTRPDGNCFFRAFSYAYLEHLL--------KDKAEYEKFYEIAKNSKEILVALGFSQFTVEDFYETFMEVVQRVGEQAGGSPEGTEEIRLELHDKFN-KQGYSDYIVVYLRLVTSGQLQTQQDFYQNFIEGPRT-VTEFCRQEVEPMYKESDHIHIIALSNALNVGVRVKYMD---RGEGSQVIAHDFPEG 256
BLAST of NO13G00280 vs. NCBI_GenBank
Match: KFB39861.1 (AGAP009507-PA-like protein [Anopheles sinensis]) HSP 1 Score: 156.8 bits (395), Expect = 1.300e-34 Identity = 93/250 (37.20%), Postives = 142/250 (56.80%), Query Frame = 0 Query: 102 AVAEQDRLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQK------TLADLEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEG 346 +V QD L + QQ EIE +IA T PLV + S L +Y D+P +++ ++DL+ +YR +RR R DGNCF+RAF +AYL LV K E+ K + S+ L E GF I+ F+E F+E + ++ + LA+L FN+ G + Y+V Y RL+T+ L++ + Y+ F+DG T + +FC +EVEP+ KE + + I+A+ LDA V +EY+D DG + H P+G Sbjct: 18 SVENQDELIIKQQREIEQEIAHTNPLVSESQEISSLNQEYLDDPV--YISKIKDLSSKYRAIRRSRPDGNCFFRAFAYAYLEYLV--------LNKSEFQKFYEYASKSRERLTEAGFPPFTIEDFYETFMEVINKVKPEGDDTTSALAELHKLFNE-QGYSDYVVVYLRLITSSHLQEKADFYQNFIDGNIT-IVEFCHQEVEPMYKESDHIHIIAICSALDAGVRVEYMD---RGDGNQVIAHDFPDG 252
BLAST of NO13G00280 vs. NCBI_GenBank
Match: XP_022097922.1 (ubiquitin thioesterase OTUB1-like [Acanthaster planci]) HSP 1 Score: 156.4 bits (394), Expect = 1.700e-34 Identity = 101/260 (38.85%), Postives = 146/260 (56.15%), Query Frame = 0 Query: 97 QQDDAAVAEQD----------RLTMAQQEEIESQIAATQPLVGALEPPSVLLPDYKDNPAKGFVAGVEDLAQRYRMMRRVRGDGNCFYRAFLFAYLAGLVEGGVGEGGKKKKEWDKLAKTVKDSKGWLVEVGFEEVAIDMFWEVFVEELEELPQKTLAD-LEATFNDPHGVASYMVWYCRLLTAGFLKKHREEYEAFLDGRYTDMNDFCAREVEPVGKECEELQIVALMRVLDAQVHIEYLDGRPLPDGGHLPVHVLPEG 346 Q D + VA+QD +AQQE I+++I PLV P SVL +Y D+ + A +EDL+ +Y +R+ RGDGNCF+RAF FAYL L+ KKE +L + SK LV +GF I F E F+E ++++ Q+ D L TF D G++ Y+V Y RLLT+G L+++ E YE F++G T + +FC REVEP+ +E + + I+AL LD V + YLD +GG + H P+G Sbjct: 7 QPDASGVADQDTEELTGMAREEAIIAQQERIQNEIKENCPLVSDRYPISVLFDEYLDDAV--YKAKIEDLSMQYSHIRKTRGDGNCFFRAFGFAYLERLL--------TDKKELKRLKTAAEMSKDQLVSLGFPSFTITDFHETFMEVIQQVEQQPEVDELVDTFRD-QGISDYIVVYLRLLTSGQLQQNAEFYENFIEGGRT-VKEFCRREVEPMARESDHIHIIALTSALDVGVRVVYLD---RGEGGKVIPHDFPDG 251 The following BLAST results are available for this feature:
BLAST of NO13G00280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO13G00280 ID=NO13G00280|Name=NO13G00280|organism=Nannochloropsis oceanica|type=gene|length=2418bpback to top protein sequence of NO13G00280.1 >NO13G00280.1-protein ID=NO13G00280.1-protein|Name=NO13G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=356bpback to top Synonyms
Publications
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