NO13G00110, NO13G00110 (gene) Nannochloropsis oceanica

Overview
NameNO13G00110
Unique NameNO13G00110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3510
Alignment locationchr13:35993..39502 -

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Properties
Property NameValue
DescriptionCln3like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr13genomechr13:35993..39502 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR003492Battenin_disease_Cln3
Homology
BLAST of NO13G00110 vs. NCBI_GenBank
Match: EWM22856.1 (cln3like protein [Nannochloropsis gaditana])

HSP 1 Score: 598.6 bits (1542), Expect = 2.000e-167
Identity = 342/481 (71.10%), Postives = 387/481 (80.46%), Query Frame = 0
Query:   94 IEKRHNLAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVXXXXXXXD-GEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHP----XXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATFSCGA 570
            +EKR NLAAFWALGLLNN+VYVIMLAGAKEI+AGGVGLVFLAD+APTFLVKL+APYWFH+ +YS+RAS+CG LMAASL+TVA G TLAVQL GVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGY WVVFFHLL  +SF +TL+ AL+LP+ W+ TFF+ LGDP+SE Y+ V+ DIN+ELSSA D+        D GE G   G+P         GTA+SAL+ P   S +Y+        XXXXXXXXXXXXXXXXXXXXXXXXXX                      +RERW LFLSLWPYTVPL+TVYWAEYAMQSG WSAIGFPV  EKARK FY +ANM YQ+GVF+SRSSG+ + PSL LLW LPALQCLLL+FF LNA+W FWYDW LL  CF+AGL GGAVYVAGFSLISR++R++HRELALVS+SIADTVGIMLS+V GL+LQGCLYRAN IPGATF+CGA
Sbjct:   18 MEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFG-----EGTAASALLSPNAISPLYSYPSTSLRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA 493          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: EWM22857.1 (cln3like protein [Nannochloropsis gaditana])

HSP 1 Score: 563.1 bits (1450), Expect = 9.500e-157
Identity = 326/463 (70.41%), Postives = 370/463 (79.91%), Query Frame = 0
Query:   94 IEKRHNLAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVXXXXXXXD-GEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHP----XXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQ 552
            +EKR NLAAFWALGLLNN+VYVIMLAGAKEI+AGGVGLVFLAD+APTFLVKL+APYWFH+ +YS+RAS+CG LMAASL+TVA G TLAVQL GVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGY WVVFFHLL  +SF +TL+ AL+LP+ W+ TFF+ LGDP+SE Y+ V+ DIN+ELSSA D+        D GE G   G+P         GTA+SAL+ P   S +Y+        XXXXXXXXXXXXXXXXXXXXXXXXXX                      +RERW LFLSLWPYTVPL+TVYWAEYAMQSG WSAIGFPV  EKARK FY +ANM YQ+GVF+SRSSG+ + PSL LLW LPALQCLLL+FF LNA+W FWYDW LL  CF+AGL GGAVYVAGFSLISR++R++HRELALVS+SIADTVGIMLS+V GL+LQ
Sbjct:   18 MEKRQNLAAFWALGLLNNVVYVIMLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWFHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFG-----EGTAASALLSPNAISPLYSYPSTSLRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ 475          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: EWM22858.1 (cln3like protein [Nannochloropsis gaditana])

HSP 1 Score: 495.7 bits (1275), Expect = 1.900e-136
Identity = 291/424 (68.63%), Postives = 331/424 (78.07%), Query Frame = 0
Query:  151 FHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVXXXXXXXD-GEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHP----XXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATFSCGA 570
            FH+ +YS+RAS+CG LMAASL+TVA G TLAVQL GVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGY WVVFFHLL  +SF +TL+ AL+LP+ W+ TFF+ LGDP+SE Y+ V+ DIN+ELSSA D+        D GE G   G+P         GTA+SAL+ P   S +Y+        XXXXXXXXXXXXXXXXXXXXXXXXXX                      +RERW LFLSLWPYTVPL+TVYWAEYAMQSG WSAIGFPV  EKARK FY +ANM YQ+GVF+SRSSG+ + PSL LLW LPALQCLLL+FF LNA+W FWYDW LL  CF+AGL GGAVYVAGFSLISR++R++HRELALVS+SIADTVGIMLS+V GL+LQGCLYRAN IPGATF+CGA
Sbjct:    7 FHHVSYSLRASLCGFLMAASLLTVALGRTLAVQLTGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYAWVVFFHLLLHMSFPATLIAALLLPIAWMFTFFYALGDPTSEAYQEVLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFG-----EGTAASALLSPNAISPLYSYPSTSLRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQGCLYRANRIPGATFTCGA 425          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: PSC75581.1 (battenin [Micractinium conductrix])

HSP 1 Score: 360.9 bits (925), Expect = 7.200e-96
Identity = 218/478 (45.61%), Postives = 275/478 (57.53%), Query Frame = 0
Query:   90 VARQIEKRHNLAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVXXXXXXXDGEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATFSC 568
            +A Q E+R  +AA+W LGLLNN  YVIMLAGA E+SA  VGLV+L  +AP  L K +APYWFH   YS R  I  +LM+ S  TVA       QL+GV F SLQ G+GEAS L +T+ Y G   I+ WSSGTGFAG+ GY WV   H+L G+SF +TLL+A V    W+A +   L  P +   +    D     S AA+            G                                     XXXXXXXXX                  +  G  GW   +    +    T RER Q  + LWPYTVPL  VY+AEYAMQSGTW+AIGFPV S  AR +FY YAN  YQ GVF+SRSSGM    S   LW++P  QC+ L FF  NAV +FWY+W LL PCF+ GLLGGAVYV  F+LIS     ++RE +L ++S+AD++G+ L+DV G+++QGCL++ANG+PGA F+C
Sbjct:    1 MAEQPERRKTMAAWWLLGLLNNAAYVIMLAGANEVSAAAVGLVYLCAVAPAMLCKASAPYWFHLVRYSTRVHIVALLMSCSYTTVALSSARGWQLLGVVFASLQGGLGEASCLAMTSYYSGRPAISMWSSGTGFAGVFGYAWVALLHMLGGLSFRATLLLANVTTAAWLAVYHLLLDPPEARVQQLWRHD-----SDAAE-----------VGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREQQRLLRVEAPLGSAQQQAVG--GWSSPKPS--RAARMTWRERLQRTVVLWPYTVPLFLVYFAEYAMQSGTWTAIGFPVASTPARHTFYVYANWMYQAGVFVSRSSGMLWQASRRALWLMPLAQCVWLAFFIANAVRKFWYNWGLLAPCFVTGLLGGAVYVNAFTLISAEVPPQYREFSLAAASLADSLGVALADVAGILIQGCLFKANGLPGADFAC 458          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: XP_005854399.1 (battenin, partial [Nannochloropsis gaditana CCMP526] >EKU21964.1 battenin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 349.4 bits (895), Expect = 2.200e-92
Identity = 255/463 (55.08%), Postives = 289/463 (62.42%), Query Frame = 0
Query:  117 MLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAAS---LITVATGETLAV----QLIGVGF----------------CSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVXXXXXXXD-GEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHP----XXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQ 552
            MLAGAKEI+AGGVGLVFLAD+APTFLVKL+APYW+       R S    L   S      + +   LA      +I V F                           MLGLTAQYHGPSTITAWSSGTGFAGIL Y              SS+LL +L          F      S E    V+ DIN+ELSSA D+        D GE G   G+P         GTA+SAL+ P   S +Y+        XXXXXXXXXXXXXXXXXXXXXXXXXX                      +RERW LFLSLWPYTVPL+TVYWAEYAMQSG WSAIGFPV  EKARK FY +ANM YQ+GVF+SRSSG+ + PSL LLW LPALQCLLL+FF LNA+W FWYDW LL  CF+AGL GGAVYVAGFSLISR++R++HRELALVS+SIADTVGIMLS+V GL+LQ
Sbjct:    1 MLAGAKEINAGGVGLVFLADVAPTFLVKLSAPYWYVAIQSKTRTSAPPPLSLPSSPNRTCLHSSRELAPAHLDTVIDVAFXXXXXXXXXXXXXXXXXXXXXXXXXXXMLGLTAQYHGPSTITAWSSGTGFAGILAY----------PCQMSSSLLTSL----------FRNHVSSSQE----VLADINDELSSAVDERDEEEYGVDEGEDGEGAGLPDFG-----EGTAASALLSPNAISPLYSYPSTSLRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRERWSLFLSLWPYTVPLVTVYWAEYAMQSGAWSAIGFPVEEEKARKLFYAWANMSYQIGVFLSRSSGLLLPPSLPLLWTLPALQCLLLLFFCLNAIWHFWYDWGLLSLCFVAGLFGGAVYVAGFSLISRHTRDDHRELALVSASIADTVGIMLSNVAGLLLQ 434          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: PRW51162.1 (Batten s disease Cln3 isoform A [Chlorella sorokiniana])

HSP 1 Score: 347.1 bits (889), Expect = 1.100e-91
Identity = 238/488 (48.77%), Postives = 299/488 (61.27%), Query Frame = 0
Query:   92 RQIEKRHNLAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDP---SSETYRGVMED---------INNELSSAADDVXXXXXXXDGEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATFSC 568
            R  EKR NLAAFW LGL+NN  YVIMLAGA +ISA  VGLV+LA + P+ L K + PYWFH   Y  R     +LM AS  TVA   +   QL+GV   SLQ+G+GEAS L LT+ Y G + IT WSSGTGFAG+ GY WV+  H L G+SF++TLL+A      W+A +   L  P   +++ +R    D                     XXXXXXX                                         XXXXXXXXXXXXXXXXXXXXXXXXXX  G G   W   + G       T RER Q  ++LWPY VPL  VY+AEYAMQSGTW+AIGFPV SE AR  FYFYAN  YQ+GVF+SRSSGM    S T+LW +P +Q   L+FF L+AV  +WY++ LL+PCF+ GLLGGAVYV  F+LIS+    ++RE +L ++S+AD++G+ L+DV G+++QGCL++ANG+ GA F+C
Sbjct:    7 RHQEKRRNLAAFWLLGLINNSAYVIMLAGANQISAAAVGLVYLAAVGPSLLCKASVPYWFHLVRYRTRMQAVALLMTASYTTVALSSSRGWQLLGVVLASLQSGLGEASCLALTSHYRGRAAITMWSSGTGFAGVFGYAWVLLLHFLAGLSFTATLLLANATCAAWLAVYHLLLEAPEERAAQLWRHDSADWAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGEGSEEWRPSKAGR-----MTWRERLQRTVALWPYMVPLFLVYFAEYAMQSGTWTAIGFPVTSEMARHRFYFYANWKYQMGVFLSRSSGMLYQASRTMLWAMPIMQVGWLVFFLLDAVHHWWYNYGLLLPCFMTGLLGGAVYVNAFTLISKEVPPQYREFSLGAASLADSLGVALADVCGILIQGCLFKANGLEGADFAC 489          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: PRW51161.1 (Batten s disease Cln3 isoform B [Chlorella sorokiniana])

HSP 1 Score: 339.0 bits (868), Expect = 2.900e-89
Identity = 238/498 (47.79%), Postives = 299/498 (60.04%), Query Frame = 0
Query:   92 RQIEKRHNLAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDP---SSETYRGVMED---------INNELSSAADDVXXXXXXXDGEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHR----------ELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATFSC 568
            R  EKR NLAAFW LGL+NN  YVIMLAGA +ISA  VGLV+LA + P+ L K + PYWFH   Y  R     +LM AS  TVA   +   QL+GV   SLQ+G+GEAS L LT+ Y G + IT WSSGTGFAG+ GY WV+  H L G+SF++TLL+A      W+A +   L  P   +++ +R    D                     XXXXXXX                                         XXXXXXXXXXXXXXXXXXXXXXXXXX  G G   W   + G       T RER Q  ++LWPY VPL  VY+AEYAMQSGTW+AIGFPV SE AR  FYFYAN  YQ+GVF+SRSSGM    S T+LW +P +Q   L+FF L+AV  +WY++ LL+PCF+ GLLGGAVYV  F+LIS+    ++R          E +L ++S+AD++G+ L+DV G+++QGCL++ANG+ GA F+C
Sbjct:    7 RHQEKRRNLAAFWLLGLINNSAYVIMLAGANQISAAAVGLVYLAAVGPSLLCKASVPYWFHLVRYRTRMQAVALLMTASYTTVALSSSRGWQLLGVVLASLQSGLGEASCLALTSHYRGRAAITMWSSGTGFAGVFGYAWVLLLHFLAGLSFTATLLLANATCAAWLAVYHLLLEAPEERAAQLWRHDSADWAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELGEGSEEWRPSKAGR-----MTWRERLQRTVALWPYMVPLFLVYFAEYAMQSGTWTAIGFPVTSEMARHRFYFYANWKYQMGVFLSRSSGMLYQASRTMLWAMPIMQVGWLVFFLLDAVHHWWYNYGLLLPCFMTGLLGGAVYVNAFTLISKEVPPQYREFPWALLHWQEFSLGAASLADSLGVALADVCGILIQGCLFKANGLEGADFAC 499          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: XP_011401066.1 (Protein btn-1 [Auxenochlorella protothecoides] >KFM28054.1 Protein btn-1 [Auxenochlorella protothecoides])

HSP 1 Score: 323.9 bits (829), Expect = 9.700e-85
Identity = 228/477 (47.80%), Postives = 279/477 (58.49%), Query Frame = 0
Query:  100 LAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQY---HGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAAD------DVXXXXXXXDGEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATFSC 568
            L AF  LGL NNI YVIMLAGA  ISA  VGLV+LA + P  +VK + PYWFH   Y  R +    LM+ S   VA   +  +QL+GV   S Q G+GEAS L L+A+Y    GP  IT WSSGTGFAG+ GY WV   H+  G+SF +TLL   VL   W+ATFF  L                              D           GG          L P +G+ S+  +  G +        XXXXXXXXXXXXXXXXXXXXXXXXXXX     TG        P   A     R  L L LWP+TVPL TVY AEY+MQSG W+AIGFPV    AR +FY YAN CYQ GVF+SRSSGM   P +  LW +PALQ  LL FF  +AV  +WY WTLL+PCF+ GLLGGAVYV  F+L+SR+     RE ++ ++S+AD++GI  +DV G+++QGCL++ N IPGA ++C
Sbjct:   15 LIAFGLLGLFNNISYVIMLAGANSISAAAVGLVYLAAVGPAIIVKASGPYWFHAVGYPPRMAAAAALMSGSFCLVALSASRPLQLLGVALASFQGGLGEASCLALSARYGSDRGP--ITLWSSGTGFAGVAGYAWVAALHVWAGLSFRTTLLAGNVLAGAWLATFFLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDPERVPLRPAAAGG----------LLPRSGSRSALAVEAGGSHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETGPGAAASLPPS--ALGPLGRLCLTLGLWPFTVPLFTVYLAEYSMQSGAWTAIGFPVTDAAARHAFYIYANWCYQAGVFVSRSSGMVWQPGMAALWAMPALQAGLLFFFLHDAVVHWWYGWTLLLPCFLTGLLGGAVYVNAFALLSRSVPPIQREFSMAAASVADSLGIACADVAGVLIQGCLFKINRIPGADYTC 477          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: KDD73692.1 (CLN3 protein [Helicosporidium sp. ATCC 50920])

HSP 1 Score: 323.6 bits (828), Expect = 1.300e-84
Identity = 195/469 (41.58%), Postives = 252/469 (53.73%), Query Frame = 0
Query:  100 LAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVXXXXXXXDGEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATFSCG 569
            L +F+ LG+LNN+ YVIMLAGA  ISA GVGLV+L  I P+  VK +AP+WFH   Y  R + C  LM+AS   VA   T +  L+GV   +LQ G+GEASML L+A+Y GP+ +TAW+SGTG AG+ GY WV   H LCG+SF +TLL+A  L   + A +F GLGDP              E  S  D              R       S       T    L+   TAS                                        G  R         + T RER    L+LWP   PL  V+++EYA+Q+GTWSA+GFPV   +AR+ FY  AN  YQ GVF+SRSSG     SL  LW +P LQ  LL+  + NA   +W DW+L  PCF+ GLLGGAVYV  F+ I+R +    RE +L ++S+AD +GI L+D   +++QGCL+R +GI GA F CG
Sbjct:   16 LGSFFLLGMLNNMGYVIMLAGATTISASGVGLVYLCAIVPSLSVKASAPHWFHRVRYGPRMATCAALMSASFCAVALSRTRSAALLGVALGALQGGLGEASMLALSARYGGPAPLTAWASGTGLAGLGGYAWVGLLHDLCGLSFPATLLLANALAAAYAAAYFRGLGDPGKGA---------TESPSPRDARRRFLPEPKESTPRAEDAAGPSSAPDERATEQRPLLALETAS---------------------------------------EGSIRGEAIVSSVRSMTARERLGASLALWPCAAPLFLVFFSEYALQAGTWSAVGFPVSDAEARRRFYVVANALYQAGVFVSRSSGTLWEASLAALWAMPLLQAALLVGLTANAAALWWNDWSLAAPCFLVGLLGGAVYVQAFARIAREAEPHLREFSLAAASLADALGIALADAVAVLIQGCLFRVHGIRGADFGCG 436          
BLAST of NO13G00110 vs. NCBI_GenBank
Match: GAY05421.1 (Hypothetical protein PINS_013219 [Pythium insidiosum])

HSP 1 Score: 318.2 bits (814), Expect = 5.300e-83
Identity = 195/474 (41.14%), Postives = 255/474 (53.80%), Query Frame = 0
Query:   95 EKRHNLAAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYWFHYFAYSIRASICGVLMAASLITVATG-ETLAVQLIGVGFCSLQAGIGEASMLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVALVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVXXXXXXXDGEGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPXXXXXXXXXXXXXXXXXXXXXXXXXXXRGAGRTGWERRRKGHPQ--THAFTMRERWQLFLSLWPYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVFISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFIAGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVLQGCLYRANGIPGATF 566
            E   NL AFW LG +NNI YVIM+AGA+EI+AGGVGLV+  DI P  LVK+T PYWFH  +Y  R  I  + M  S + VA G  +LA QL+GV F  LQ+G+ EAS L L + Y     +T WSSGTG AG+ GY WV  FHL  G+SFS+TLL+A + PL ++  F                            DV                              ++ L  P   +  Y + P                             AG      R + H      A T +E+ +  L+L PY +PL  VY+AEY MQ+G WS IGFPV S  AR +FY  A M YQ GVFISRSSG+    +  +L+++PALQ  LL+FFS+ + + FWY+W+LL+ CF+AGLLGG VYV  ++L+S      H E AL ++S+ DT+G+M++D  GL LQGCLY  NG+ GATF
Sbjct:   18 EALRNLLAFWVLGFINNIGYVIMIAGAQEIAAGGVGLVYFFDIFPALLVKVTGPYWFHLISYRHRTYIGALWMLLSFLVVAFGTHSLAWQLLGVAFSGLQSGMMEASFLALASFYQSRHCLTCWSSGTGLAGVGGYAWVAIFHLWLGLSFSATLLLACIFPLLYVIMF----------------------------DVVLD---------------------------TAHLPSPRQVTGEYTVIP------------------------DRPEDAGADADATRNQYHQPVGAAALTFKEKLRFTLTLGPYIIPLTVVYFAEYTMQTGVWSTIGFPVTSADARSAFYASAGMAYQSGVFISRSSGVLFQATRPVLYVMPALQVGLLVFFSMVSAFHFWYNWSLLVFCFVAGLLGGGVYVNAYTLLSAEVPASHVEFALSAASVGDTIGVMIADFGGLFLQGCLYSLNGLSGATF 412          
The following BLAST results are available for this feature:
BLAST of NO13G00110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22856.12.000e-16771.10cln3like protein [Nannochloropsis gaditana][more]
EWM22857.19.500e-15770.41cln3like protein [Nannochloropsis gaditana][more]
EWM22858.11.900e-13668.63cln3like protein [Nannochloropsis gaditana][more]
PSC75581.17.200e-9645.61battenin [Micractinium conductrix][more]
XP_005854399.12.200e-9255.08battenin, partial [Nannochloropsis gaditana CCMP52... [more]
PRW51162.11.100e-9148.77Batten s disease Cln3 isoform A [Chlorella sorokin... [more]
PRW51161.12.900e-8947.79Batten s disease Cln3 isoform B [Chlorella sorokin... [more]
XP_011401066.19.700e-8547.80Protein btn-1 [Auxenochlorella protothecoides] >KF... [more]
KDD73692.11.300e-8441.58CLN3 protein [Helicosporidium sp. ATCC 50920][more]
GAY05421.15.300e-8341.14Hypothetical protein PINS_013219 [Pythium insidios... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL132nonsL132Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR017ncniR017Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR056ngnoR056Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001898NSK001898Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO13G00110.2NO13G00110.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO13G00110.1NO13G00110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|617450gene_11828Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100243g3gene7594Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO13G00110.2NO13G00110.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO13G00110.1NO13G00110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO13G00110 ID=NO13G00110|Name=NO13G00110|organism=Nannochloropsis oceanica|type=gene|length=3510bp
ATGTGCGTCTCCCCTCAACCACACACATTGCACAGGCACCACCCCGAGCA
CCAGCAGCCCCAGCACGAGATTGGCTCTGCAACCACCGTGGCGGCATCTC
CTTCTCACGTTTTCCCGTTTGAGGTGGGAAGCGACGCCCTGCCCCCTCCT
CCTGCACCTACAGCGGTGCTCTTGTCCCCCCCTCGGCCGAACGCCGGAGG
AGGAGGCGAAGGGGGCGGAAGAGGAGCCAGTATGTGGTGGGGTGGAAGGA
GGAAGGAGGGAGAGACAGTAGCACGGCAGATTGAGAAACGCCATAACCTG
GCAGCTTTCTGGGCTTTGGGATTGTTGAACAATATTGTGTATGTGATCAT
GCTCGCCGGCGCTAAAGgtgagggtggaaggaaagagaagtgggagagag
gaactcggcagaagagagcaagtgcgagggagcgggactcgggatatggg
ggggagagtttcaagtcgttggtgttgatgtacgggtgtggtccttttgc
tcatgcccccgcttccgaacgattacgcactcagAGATCAGCGCAGGCGG
TGTGGGTCTAGTCTTTCTGGCTGACATTGCTCCCACCTTCCTCGTCAAGC
TCACGGCGCCCTACTGgtacgtgttaaggggacacgactacggaaaaaaa
agaaaatatttcatattcacgtcttctttctccttccctccctgcctccc
ttcctcctaagGTTTCACTATTTTGCCTACTCTATCCGAGCCTCGATATG
CGGGGTGCTGATGGCGGCCTCCCTTATCACGGTCGCGACGGGGGAAACCC
TGGCTGTCCAGCTTATTGgtaagggagggagggagggaggaagtgaggac
ggaagggcagggaggggtagggaggggtcaaagagaagaggacctcttat
tggtgacgacaaaaagaaaacacggaggagaagatctctcgaaaggctca
agaggctctgtttcactgtctctcaccatccatccctccctcccttcctc
cctccctcccttcctccctcccccccttcctccctccctctccacagGCG
TGGGGTTCTGCTCCCTCCAAGCTGGCATCGGAGAAGCCTCAATGCTGGGT
CTGACGGCGCAGTATCACGGCCCTTCTACCATTACGGCCTGGTCGTCAGG
CACGGGCTTCGCGGGCATCCTGGgtagggagggagggagggagggaggga
gggatagaagaatactgttgcttcgaatgtgtcaccctttctcaacttcc
catgcaattctccatccctccctccctccttccctctttcctcctcgcct
tcagGCTACGGCTGGGTTGTTTTCTTCCACCTTCTGTGCGGCGTCTCCTT
CTCCTCCACCCTCCTAGTCGCCCTCGTGCTCCCCCTCGGGTGGATCGCCA
CCTTCTTCTTCGGACTCGGTGACCCCTCCTCCGAAACATACAGGgtaagc
ccccctccctccctcccttcctccctccctcccttccttcccgcatgcat
acatacccaccaatctatttttttcctccctcacatgcattctccctcct
tccctccctccttccctccctccttccctccctccttccctccctcccgc
cctagGGGGTCATGGAAGACATCAACAACGAGCTTAGCTCGGCGGCCGAT
GATGTGAACGAGGAGGAAGAAGAGAGGGATGGGGAGGGAGGGAGGGAGGG
GGGGGTGCCCGTGTCGTCGATGCTGGGGCCGgtaagagaatgacgttgga
ggaagggaggaggggagggaagggggggaaagggtggaggataaatgaag
gtacaaagtcttggctctcctcctctttcactcatttccctccctccctt
cctcctactttctcccttcctccctctctccctccctccctccctcacac
ccacgcaaaacaagTTGAACGGGACCGCCTCGTCTGCCCTCATCCGTCCC
GGCACGGCTTCAGCCGTCTATGCCCTGCACCCGCCCTCAACGGAGGAGGT
GGAGGAGGAGGAGGAAGAGTGGGAGGAAGAGCTGCCATGCAGGAGAAGGA
CCGAGGGAGGGGGTAGAGGGGCGGGGAGAACGGGATGGGAGAGGAGGCGG
AAGGGTCATCCTCAGACGCATGCATTTACGATGCGTGAACGGTGGCAACT
CTTCTTGAGCCTCTGGCCTTACACGGTGCCATTGgtgaggaggctggagg
ggggggtcggagggagggagggtagctggagacgggcaggccgagcactg
cagttgtagcatgctcccattcattcaagcatgtcctctctcactccctc
cctcccttagATCACTGTGTACTGGGCGGAATACGCGATGCAATCCGGCA
CTTGGTCGGCCATCGGCTTTCCCGTCTACTCGGAAAAGGCCCGCAAGTCC
TTCTATTTCTATGCCAATATGTGCTACCAGGCGCGTGTGGATGCCCCGAA
CCCCTTCCCTCCTTTCGTTCCCCCCTCCTTTCGTGATTCCCTTCCTTCTC
TCCTCATTTCTCTGACTGTTCTCATCACTCCTTTGCCTCCCAGGTCGGCG
TCTTCATCTCCCGCTCATCCGGCATGTTTATTTCTCCCTCCTTGACATTA
CTCTGGATCCTCCCCGCCCTTCAATGCCTCCTCCTCATCTTTTTCAGCCT
GAACGCTGTCTGGCAGTTCTGGTGCGTGTGTGGGAGGGAAGGAGGAAGGG
GGGAGAGGATATAGGCAAGAGATAGAAAGCGGAAGGCGTGAAGGTGGGGA
GGCTTTACTCGCACCGATAGTCACTCAACCACACGACATGGTGTTTCGAT
ATACTGGAGGTCAAACCACGGTCCGTATCGACGACCTCACGATACAAATC
CACTTAACTCCACTCTTCCTCCCCCGAAACAAAAAAGTCGCCTCTATTTA
CAATGCACTTTTTCAACACACTTGTCCATAGGTATGACTGGACGCTGCTC
ATACCTTGCTTCATCGCGGGGCTGCTGGGTGGCGCCGTATATGTGGCCGG
CTTTAGTTTGATTTCGCGAAATTCCCGGGAGGAACACAGGTAGGAGCGTG
CTTCGAGGGGCCACTTAGACTGTTTTCCCTGCACCTTTTCCTTTACTCAT
ACATGCACACGCACACTCTCTTTCTCAAGGGAACTGGCTTTAGTATCCTC
GTCAATTGCGGACACCGTTGGAATTATGTTAAGCGACGTATTCGGGCTCG
TGTTGCAGGTAAGGAATCGATAACCGTTTTGTCACTTCTTTTCTGATATG
TGCCTCTGCTCATGTTTAATCTACAAATTCATGCATACTCAACCTTATCT
TCACGACACACCCGCATTCTCTCTCCCCTTCACCTCTCAGGGCTGTCTGT
ATCGCGCTAATGGCATTCCTGGCGCGACGTTTTCCTGTGGTGCGTGACGC
AGGCCATTGTTTTGCATAGGATGTATATAATCAAGTAAGGATTGAAAGTA
ATACGAATCAAAGCAATCCACAAGGAACAAAAGAATTGGTGTTAAAGATT
GTGATGGAAC
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protein sequence of NO13G00110.2

>NO13G00110.2-protein ID=NO13G00110.2-protein|Name=NO13G00110.2|organism=Nannochloropsis oceanica|type=polypeptide|length=501bp
MCVSPQPHTLHRHHPEHQQPQHEIGSATTVAASPSHVFPFEVGSDALPPP
PAPTAVLLSPPRPNAGGGGEGGGRGASMWWGGRRKEGETVARQIEKRHNL
AAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYW
FHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEAS
MLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVA
LVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVNEEEEERDG
EGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPPSTEEVEEEEE
EWEEELPCRRRTEGGGRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLW
PYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQARVD
APNPFPPFVPPSFRDSLPSLLISLTVLITPLPPRSASSSPAHPACLFLPP
*
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protein sequence of NO13G00110.1

>NO13G00110.1-protein ID=NO13G00110.1-protein|Name=NO13G00110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=570bp
MCVSPQPHTLHRHHPEHQQPQHEIGSATTVAASPSHVFPFEVGSDALPPP
PAPTAVLLSPPRPNAGGGGEGGGRGASMWWGGRRKEGETVARQIEKRHNL
AAFWALGLLNNIVYVIMLAGAKEISAGGVGLVFLADIAPTFLVKLTAPYW
FHYFAYSIRASICGVLMAASLITVATGETLAVQLIGVGFCSLQAGIGEAS
MLGLTAQYHGPSTITAWSSGTGFAGILGYGWVVFFHLLCGVSFSSTLLVA
LVLPLGWIATFFFGLGDPSSETYRGVMEDINNELSSAADDVNEEEEERDG
EGGREGGVPVSSMLGPLNGTASSALIRPGTASAVYALHPPSTEEVEEEEE
EWEEELPCRRRTEGGGRGAGRTGWERRRKGHPQTHAFTMRERWQLFLSLW
PYTVPLITVYWAEYAMQSGTWSAIGFPVYSEKARKSFYFYANMCYQVGVF
ISRSSGMFISPSLTLLWILPALQCLLLIFFSLNAVWQFWYDWTLLIPCFI
AGLLGGAVYVAGFSLISRNSREEHRELALVSSSIADTVGIMLSDVFGLVL
QGCLYRANGIPGATFSCGA*
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Synonyms
Publications