NO12G03960, NO12G03960 (gene) Nannochloropsis oceanica

Overview
NameNO12G03960
Unique NameNO12G03960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3061
Alignment locationchr12:1136175..1139235 -

Link to JBrowse

Properties
Property NameValue
Description3-oxoacyl-(Acyl-carrier-protein) reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:1136175..1139235 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO12G03960 vs. NCBI_GenBank
Match: EWM25630.1 (3-oxoacyl-(acyl-carrier-protein) reductase [Nannochloropsis gaditana])

HSP 1 Score: 458.4 bits (1178), Expect = 1.700e-125
Identity = 253/291 (86.94%), Postives = 265/291 (91.07%), Query Frame = 0
Query:    1 MLAR--ALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIG 290
            MLAR   L  T  VM SSS+LAFV PA R TARS+G          EK +VAIVTG SRGIGKACALELA++GVKVVVNYASSA+SALAVVEEIKALGSEAVAIKADMSKP EV+ALFKETAAAFKDPV+ILVNNAGITKDGLV+TMKPE WQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLG++SEVAGMVRFLA+DPAA YITGHSFDVDGGIAIG
Sbjct:   26 MLARVCVLVATFFVMFSSSALAFVAPAVRMTARSAGXXXXXXXXXXEKANVAIVTGASRGIGKACALELAQHGVKVVVNYASSADSALAVVEEIKALGSEAVAIKADMSKPEEVEALFKETAAAFKDPVNILVNNAGITKDGLVMTMKPEAWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGRASEVAGMVRFLAVDPAAAYITGHSFDVDGGIAIG 316          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: GAX29363.1 (3-oxoacyl-[acyl-carrier protein] reductase [Fistulifera solaris])

HSP 1 Score: 305.1 bits (780), Expect = 2.400e-79
Identity = 176/294 (59.86%), Postives = 213/294 (72.45%), Query Frame = 0
Query:    2 LARALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYAS--SAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            L  +L L  L   +S+  +   P   + ARSS  + M+A    E   V +VTG SRG+G++ AL+L  +G KVVVNY S  S ESA   VE+IKA G +A+A+KAD SK  ++D +FK    AF   V +L+NNAGIT+D LV+ MKPE WQAVID NLSGVFY ++A   +  + R GRIINM+SVVGQIGNPGQANYAAAKGGVL +TKANAKEFAARGVTVNA+CPGFIESDMT  L    L+ + K IPL RLGK  EVAGM RFLA+DPAA YITGH+F+VDGGIAIG+
Sbjct:    5 LLSSLFLLALPWTTSAFHSAFVPRRTSIARSSSTLSMVA----ENAKVIVVTGSSRGLGRSIALDLGSHGQKVVVNYVSDGSKESAEKTVEDIKAAGGDAIAVKADTSKIEDIDNMFKAAVDAF-GTVDVLINNAGITRDTLVMRMKPEQWQAVIDTNLSGVFYCTQAFFKLAAKKRTGRIINMSSVVGQIGNPGQANYAAAKGGVLAMTKANAKEFAARGVTVNAICPGFIESDMTSVLSEEYLEEVSKGIPLKRLGKPEEVAGMTRFLALDPAADYITGHTFNVDGGIAIGA 293          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: GAX26357.1 (3-oxoacyl-[acyl-carrier protein] reductase [Fistulifera solaris])

HSP 1 Score: 303.5 bits (776), Expect = 7.000e-79
Identity = 175/294 (59.52%), Postives = 213/294 (72.45%), Query Frame = 0
Query:    2 LARALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYAS--SAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            L  +L L  L   +S+  +   P   + A+SS  + M+A    E   V +VTG SRG+G++ AL+L  +G KVVVNY S  S ESA   VE+IKA G +A+A+KAD SK  ++D +FK    AF   V +L+NNAGIT+D LV+ MKPE WQAVID NLSGVFY ++A   +  + R GRIINM+SVVGQIGNPGQANYAAAKGGVL +TKANAKEFAARGVTVNA+CPGFIESDMT  L    L+ + K IPL RLGK  EVAGM RFLA+DPAA YITGH+F+VDGGIAIG+
Sbjct:    5 LLSSLFLLALPWTTSAFHSAFVPRRTSIAQSSSTLSMVA----ENAKVIVVTGSSRGLGRSIALDLGSHGQKVVVNYVSDGSKESAEKTVEDIKAAGGDAIAVKADTSKIEDIDNMFKAAVDAF-GTVDVLINNAGITRDTLVMRMKPEQWQAVIDTNLSGVFYCTQAFFKLAAKKRTGRIINMSSVVGQIGNPGQANYAAAKGGVLAMTKANAKEFAARGVTVNAICPGFIESDMTSVLSEEYLEEVSKGIPLKRLGKPEEVAGMTRFLALDPAADYITGHTFNVDGGIAIGA 293          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: ABF73009.1 (plastid beta-ketoacyl-ACP reductase protein precursor [Karenia brevis])

HSP 1 Score: 302.8 bits (774), Expect = 1.200e-78
Identity = 163/268 (60.82%), Postives = 207/268 (77.24%), Query Frame = 0
Query:   27 RATARSSG-AMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            RAT+  +G  + +  + A  +  V IVTGGSRG+GKA AL+LAK G K++VNYA+SA +A  VVEEIK LG + VA++ADMS    VD LFK  A AF +PV +LVNNAGIT+D L + MKP  W  VI+ NL+GVF+A++AA+ VML+ R+GRIIN+ASVVG+IGNPGQANYAAAKGGV+ +T + A+EF +RG+TVNAV PGFIESDMT +L    +D   K IPLGR GK  EVAG+V++LA+DP+ALYITGH  +VDGGIAIG+
Sbjct:   63 RATSNLNGKRLSLSPSMADAEKPVVIVTGGSRGLGKAIALDLAKEGCKIIVNYAASAAAAEEVVEEIKKLGGDGVAVQADMSTKEGVDGLFKAAAEAFDEPVGVLVNNAGITRDALTMRMKPAQWTDVINTNLNGVFFAAQAASKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMSMAREFGSRGITVNAVAPGFIESDMTAELPQEIVDLQLKNIPLGRFGKPEEVAGLVKYLALDPSALYITGHCLNVDGGIAIGT 330          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: OSX79458.1 (hypothetical protein BU14_0076s0014 [Porphyra umbilicalis])

HSP 1 Score: 302.0 bits (772), Expect = 2.000e-78
Identity = 163/249 (65.46%), Postives = 198/249 (79.52%), Query Frame = 0
Query:   42 AAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            AA     VAIVTG SRGIGKA AL LA  G KVVVNYA SA++A +VV +I+A G EA+A++ D+S+ A+V ALF +T  A    V +LVNNAGIT+D L++ MK   WQ VID+NL+GVF  ++AAA +M++AR GRI+N+ASVVGQIGNPGQ NYAAAKGGVLGLT A AKE A+RGVTVNAV PGFI SDMT +L LD IK  IP+GRLG+++EVAGMV FLA DPAA Y+TGH+F+VDGGIAIG+
Sbjct:  108 AADGSPKVAIVTGASRGIGKAIALALAAAGCKVVVNYARSADAAASVVADIEAAGGEALAVRGDVSQAADVAALF-QTVVATYGAVDVLVNNAGITRDTLLMRMKQAQWQEVIDLNLTGVFLCTQAAAKLMIKARAGRIVNIASVVGQIGNPGQVNYAAAKGGVLGLTMATAKEVASRGVTVNAVAPGFIASDMTAELPLDKIKAMIPMGRLGEAAEVAGMVTFLATDPAAAYVTGHTFNVDGGIAIGA 355          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: XP_005758549.1 (hypothetical protein EMIHUDRAFT_438770 [Emiliania huxleyi CCMP1516] >EOD06120.1 hypothetical protein EMIHUDRAFT_438770 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 301.6 bits (771), Expect = 2.600e-78
Identity = 172/289 (59.52%), Postives = 212/289 (73.36%), Query Frame = 0
Query:    5 ALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            +LA+   + L S+S   +  A R  A+   A R     A +   V IVTGGSRG+G+A AL L K G +VVVNYA+SA +A AVVEEIK LG + VA++ADMS P  ++ LFK TA AF DPV +LVNNAGIT+D L+L MK + W+ VI+ NL+GVFYAS+AAA  M +AR+GRIIN+ASVVG+IGNPGQANYAAAKGGV+ +T   AKE A+RGVT NAV PGFI SDMT+ LD   +  + K IP GR GK  EVAG+V+FLA+DPAA YITGH  +VDGGIAIG+
Sbjct:    2 SLAMFMGLTLPSASALALGRAGRFAAQQRFAARGAVQMAADG-PVCIVTGGSRGLGRAIALSLGKEGCRVVVNYAASAAAAEAVVEEIKGLGGDGVAVQADMSSPEGINTLFKATADAFDDPVGVLVNNAGITRDTLILRMKQQQWEDVINTNLNGVFYASQAAAKTMCKARKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMTMAKELASRGVTCNAVAPGFISSDMTDVLDEKIVSEVMKGIPAGRFGKPEEVAGLVKFLALDPAADYITGHCINVDGGIAIGT 289          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: CBJ48414.1 (3-ketoacyl-(acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase [Ectocarpus siliculosus])

HSP 1 Score: 300.1 bits (767), Expect = 7.700e-78
Identity = 165/290 (56.90%), Postives = 216/290 (74.48%), Query Frame = 0
Query:    6 LALTTLVMLSSSSLAF-VPPAFRATARSSGAMRMMAAAA---GEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKD-PVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            LA  ++  ++  + AF VPPA R++     A   ++ AA     ++ +AIVTG SRG+G A A +LA  G  V+VNYA+S+ +A  VV+ I+  G +A A+KAD+SK  EV  LF + AAAF D  + ++VNNAGIT+D L + MKP+ WQ+VID+NLSGVFY S+AA  +ML+ R+GRIIN++S+VG IGNPGQANYAAAK GV+G+T + A+EFAARGVTVNAVCPGFIESDMT  LD D IKK IPLGRLGK  E+AGMV+F+A + +A YITG +F VDGG+AIG+
Sbjct:    3 LATLSIACMAGYARAFVVPPAARSSFAQPAARAGLSTAAVGGSPRMSIAIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKAAAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 292          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: XP_002180902.1 (3-oxoacyl-[acyl-carrier protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47554.1 3-oxoacyl-[acyl-carrier protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 299.7 bits (766), Expect = 1.000e-77
Identity = 160/246 (65.04%), Postives = 194/246 (78.86%), Query Frame = 0
Query:   49 VAIVTGGSRGIGKACALELAKYGVKVVVNYAS--SAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIG 290
            V +VTG SRG+GKA AL+L K G KV++NY S  S E A A VEEIK+LG +A+AI+AD SKP  + ++F+E    F   V +L+NNAGIT+D LV+ MKP+ WQ VIDINLSGVFY S+A   V  + R GRIIN++SVVGQIGNPGQANYAAAKGGV+G+T +NAKEFAARG+TVNA+CPG+IESDMT  LD   L+ + + IPL RLGK  EVAGM RFLA+DPAA YITGH+F+VDGGIAIG
Sbjct:    8 VVLVTGSSRGLGKAIALDLGKAGQKVIINYVSDGSKEGADAAVEEIKSLGGDAIAIQADSSKPDSIKSMFEEAVEKF-GTVDVLINNAGITRDTLVMRMKPQQWQDVIDINLSGVFYCSQAFFKVASKKRTGRIINISSVVGQIGNPGQANYAAAKGGVIGMTYSNAKEFAARGITVNAICPGYIESDMTAVLDEAYLEKVAEIIPLKRLGKPEEVAGMARFLALDPAADYITGHTFNVDGGIAIG 252          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: XP_009035294.1 (hypothetical protein AURANDRAFT_23580 [Aureococcus anophagefferens] >EGB10505.1 hypothetical protein AURANDRAFT_23580 [Aureococcus anophagefferens])

HSP 1 Score: 297.0 bits (759), Expect = 6.500e-77
Identity = 160/243 (65.84%), Postives = 190/243 (78.19%), Query Frame = 0
Query:   51 IVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            +VTG SRGIG+A AL+L   G  VVVNYA+S   AL VVE IKA G +AVA+KADM+   E+ ALFKETA  F     +LVNNAGITKDGL + MKP  WQAVID+NLSGVFY S+AA + M + R GRIINM+SVVG  GNPGQANYAAAKGGV GLT +NAKEFA RGVTVNAVCPGFI ++M  +L    L+ +K+AIPLGRLG++ EVAG+VR+LA+D +A YITGHS  +DGGIAIG+
Sbjct:    9 VVTGASRGIGRAIALDLGAQGCNVVVNYAASEGPALEVVEAIKASGGDAVAVKADMASVDEIKALFKETADHF-GGCDVLVNNAGITKDGLAMRMKPAQWQAVIDVNLSGVFYCSQAAFTQMAKKRAGRIINMSSVVGLFGNPGQANYAAAKGGVCGLTMSNAKEFAGRGVTVNAVCPGFIGTEMANELGEDMLNKVKEAIPLGRLGEADEVAGLVRYLALDKSAAYITGHSMTIDGGIAIGA 250          
BLAST of NO12G03960 vs. NCBI_GenBank
Match: KOO24104.1 (hypothetical protein Ctob_001628 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 296.6 bits (758), Expect = 8.500e-77
Identity = 161/267 (60.30%), Postives = 202/267 (75.66%), Query Frame = 0
Query:   27 RATARSSGAMRMMAAAAGEKVDVAIVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAVAIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLD---LDGIKKAIPLGRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGS 291
            R+ A +S A   +  A G    V IVTGGSRG+G+A AL L K   KVVVNYA+SA +A  VVEEIKA+G + VA++AD      ++ LFK TA  + +PV +LVNNAGIT+D LVL MKP  WQ VID+NL+GVFYAS+AA  +M++AR+GRIIN ASVVG+ GN GQANYAAAKGGV+ +T + A+E  +RGVTVNA+ PGFIESDMT +L    +DG+ K IPLGR GK  EVAG+V++LA+DP+ALYITGH  +VDGGIAIG+
Sbjct:   21 RSLAVTSRAATPVMEATG---PVCIVTGGSRGLGRAIALALGKEKCKVVVNYAASAAAAEKVVEEIKAMGGDGVAVQADTGTQEGIEKLFKATAEKWDEPVGVLVNNAGITRDTLVLRMKPSQWQEVIDVNLNGVFYASQAATKIMMKARKGRIINTASVVGRFGNIGQANYAAAKGGVIAMTMSMARELGSRGVTVNAIAPGFIESDMTAELPKEIVDGVMKNIPLGRFGKPDEVAGLVKYLALDPSALYITGHCINVDGGIAIGT 284          
The following BLAST results are available for this feature:
BLAST of NO12G03960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25630.11.700e-12586.943-oxoacyl-(acyl-carrier-protein) reductase [Nannoc... [more]
GAX29363.12.400e-7959.863-oxoacyl-[acyl-carrier protein] reductase [Fistul... [more]
GAX26357.17.000e-7959.523-oxoacyl-[acyl-carrier protein] reductase [Fistul... [more]
ABF73009.11.200e-7860.82plastid beta-ketoacyl-ACP reductase protein precur... [more]
OSX79458.12.000e-7865.46hypothetical protein BU14_0076s0014 [Porphyra umbi... [more]
XP_005758549.12.600e-7859.52hypothetical protein EMIHUDRAFT_438770 [Emiliania ... [more]
CBJ48414.17.700e-7856.903-ketoacyl-(acyl-carrier-protein) reductase, 3-oxo... [more]
XP_002180902.11.000e-7765.043-oxoacyl-[acyl-carrier protein [Phaeodactylum tri... [more]
XP_009035294.16.500e-7765.84hypothetical protein AURANDRAFT_23580 [Aureococcus... [more]
KOO24104.18.500e-7760.30hypothetical protein Ctob_001628 [Chrysochromulina... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010388NSK010388Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03960.1NO12G03960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|529283gene_5577Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100037g12gene4871Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03960.1NO12G03960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03960 ID=NO12G03960|Name=NO12G03960|organism=Nannochloropsis oceanica|type=gene|length=3061bp
TCCTTCTATACTTTTTTCTCTCCAAAACTTCGCGCGTTCGATATTTTTTC
CTTTTCATTTGATCATCCATGTACATTTTCACCCACATCCTCTTCTGCTC
CCTCGTCTGCTCCTCATTTCCCCCTGCCGGCATCGACCATTTTCCGTAGC
TCCTCGACCTCTTTCCGTTGCTTCTCCAGGTTCACTCGCTTCTGTTCCTT
CTCTGGGTGAAAGTACAGGACCACCAAATACCGGCCGCATACGTTGAAGC
CATTCAAGTGCTCGAGGGCGTCCTTGGCATCGTAAATATCCTCGTAGATG
ACAAAGGCCTTGCCGCGATTCTCGTTTGCGGCACCAACGCGTATCTGGGC
GTAGGGGGAGGGAAAGGGAGGATGCGGAAACACGAGAAAAGGAGGAAAGT
ATTCCGTGCCGTGAGCAAAAGAGGTAGGGGAACCGTGACTCGTTGCCGTA
AACCGGAGAAGAGAGCAGAACCAAGGGGCGATACACGCCAACATGCCCCA
TTGACCGCGCGAGTCACTCAAATCCGGCAATGATATGCAAAAGTGCAGGA
AACTCGCATGTATGGCATCACATCCCTTCACACTCACCCTCCTGCTGCGT
TCTCTCCCTCCCACCCCAAAACTCTCAAGACGTACCTGTCTGATTGGACC
GTACTTGCCAAAGATATCGTAAAGTTCATCCGAAGAGAGTTTAAAGGGCA
GGTTACGCACGTACAGGATGCGGGTCACGTCGGGCGACAGGCGGTTCCGC
TGCCGGAAGTTAGCGGCGTCGGCCATCTGTGTTGTGATGTTGGGTGCGAC
ACGGAAGGAGGAAGGATGGAGGGTGACGATGATGCGTTTGGTTTTTGGTG
AGAGCGGGGCAAGGGAGGCTGGTACGGGGGATGAGGCTGGGCAGGGAGCA
CTAGCACACTTTCATGCACTCACAAGCCACACAGCCATAGACAGATGACA
AACCCGGCTTATGAGGCCAGGCAACAGACAACAGGACAGGGCGTGAACGG
GAGAAGCTGGGCGTCTCCGGTCATCATTTATGTCTCAATCTACGTGTCCT
CCCTCGTCGCCAAGCCGATCACCAAACAACAGACGAGGCAATTCTGTCTA
TCACAAACCACCTACAGCCACCGCTATCGGCTGCGTTATGCCCCCCACCT
TACCAAGCAGACATAAAACGCTGCTATTCAGCCCCTTGCCGCTGCGATGG
GCTTCACAATCCACAACGGGTGGTCCCTCCTTACCGCTGCGACGAGAGAC
ACGAGCAACGTCGCCCGTGACGAGACGCGTCCAAACCCGCGCCAGACAAA
ACTCTCACCCTCTTCACGCCGCCATCCCACGCACTACCTGCGACAGGCTC
TAATTCTAAGCCAAGGCTGAACTTGCCCTTCTACGCAGAAATGCTTGCCC
GCGCCCTCGCCCTAACGACGCTCGTCATGCTCTCCTCCTCCTCCTTGGCC
TTTGTTCCCCCCGCCTTCCGTGCCACGGCCCGCAGCAGCGGTGCCATGCG
CATGATGGCGGCGGCAGCCGGCGAAAAGGTGGATGTGGCCATTGTGACAG
GAGGATCTCGCGGGATCGGCAAAGCCTGCGCGTTGGAGCTCGCCAAGTAC
GGTGTGAAGGTGGTGGTGAACTACGCCTCCTCGGCCGAGTCTGCTCTGGC
CGTGGTGGAAGAGATTAAAGCCCTGGGGTCCGAGGCCGTGGCCATTAAGg
tatacagcggcggtatttgggaaacaatcgagacggaatggcaatatata
gtgttatatttaatatttcctccctttctaccctccctttcctctagGCC
GATATGTCCAAGCCCGCCGAGGTGGATGCCCTGTTCAAGGAGACCGCCGC
GGCCTTCAAGGACCCCGTATCCATTCTTGTCAATAACGCCGGCATCACCA
AGGACGgtacgtatttatggattcgttgatttgttcgtccattcttgtct
ctcgtaagggccttgctccccccttcctctgcctcatctcttcaatttcc
caccacctaacccttcttcccttcctaagGCCTGGTCCTGACCATGAAGC
CCGAGAACTGGCAAGCCGTGATCGATATCAATCTTTCCGGTGTTTTCTAC
GCCTCCAAGGCTGCCGCGTCCGTCATGCTCCGAGCCCGGCGCGGCCGCAT
CATCAACATGGCCTCGGTTGTCGGCCAGATCGGGAATCCTGGACAGgtgg
gtgtgcgcttctttctcttcttcttacatctgctttttttcgtcacgatt
tctgcacttagccctcctctttccccttgcatcggcccactcaaattctc
tacagcccaaaacaacaagtacccaccacctctccctctctccttctctc
cctccattcctctctccctccctccctttcttccgataccccgcccagGC
CAACTATGCGGCGGCTAAAGGCGGTGTCCTGGGCCTGACTAAGGCCAACG
CCAAGGAGTTCGCGGCGCGTGGGGTGACGGTCAACGCGGTCTGCCCCGGG
TTCATCGAGAGTGACATGACAGAAAAGCTGGACTTAGACGGAATCAAGAA
GGCGATCCCGTTGGGGAGGCTGGGGAAGTCGAGCGAGGTGGCCGGCATGG
TGCGTTTCTTGGCGATTGACCCGGCGGCGCTGTACATCACAGGTCATTCC
TTTGACGTTGATGGGGGGATTGCGATTGGCTCGACTTAAGCGAGGAGGAC
GAGGGAGGGAGGGAGGAGGGAGAAGGGAGGAAGGGAGGGATCGAGGATTT
CATAGGGTGGGTGGATGTGATCGTTATTTGTGCTCTTTGTTTCTTGCGAT
GTGTGTGGTAGGTAAAGTGTTATTTGTGCTCTCTTTCTTGAGATGTGCGT
GGTAGGTAAAGTGTGTGTGTGTATGTGTGTGTTTGCGTGCATGTTTGGAA
CGCTTGGGAGTGATCAGGAGAAGCGAGGGAGGGTAAGGAACGCGGAGCTG
TGGCGCTGCCGTCGTGATGGCGGGATTGCGTTTAGCCGAGGACGGGGGAG
GAGACTTTTCCCCTCCTTTTTAAAACACGAAAAGGAAAAAAAAATTGGTC
CTTTGCCAATA
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protein sequence of NO12G03960.1

>NO12G03960.1-protein ID=NO12G03960.1-protein|Name=NO12G03960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bp
MLARALALTTLVMLSSSSLAFVPPAFRATARSSGAMRMMAAAAGEKVDVA
IVTGGSRGIGKACALELAKYGVKVVVNYASSAESALAVVEEIKALGSEAV
AIKADMSKPAEVDALFKETAAAFKDPVSILVNNAGITKDGLVLTMKPENW
QAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAA
AKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPL
GRLGKSSEVAGMVRFLAIDPAALYITGHSFDVDGGIAIGST*
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Synonyms
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