NO12G03930, NO12G03930 (gene) Nannochloropsis oceanica

Overview
NameNO12G03930
Unique NameNO12G03930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3326
Alignment locationchr12:1127976..1131301 -

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Properties
Property NameValue
DescriptionCCR4-NOT transcription complex subunit 7/8
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:1127976..1131301 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR006941RNase_CAF1
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003676nucleic acid binding
Homology
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_005854806.1 (CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526] >EKU21555.1 CCR4-NOT transcription complex subunit 7/8 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 559.7 bits (1441), Expect = 9.100e-156
Identity = 262/296 (88.51%), Postives = 281/296 (94.93%), Query Frame = 0
Query:  125 EGGEIPGIGPTRHIYTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQATNRQQQG 421
            E GEIPG+GPTRHIYT  DGKRMEIREVW+ENLD EM A+REVVE+YPYVAMDTEFPGVVARPVGDV+A+DYQYKTLKCNVDLLKIIQLGLSFAD++GNSPP+CPTWQ NF+FSL+DD+YAEDSIELLKQSGIDFSKHE HGIDV RFGELLMTSGLVLMD+VRWISFHSGYDFGYLLKVLTC+ALP+DENGFFDLLRTYFPCFYDIKYLMTAC GLHGGLQ+IAEELSVAR+GPMHQAGSDSLLTAQTFFRLC VSF+GL NLSDEKFKGELFGLGHNHTVYR+KMQ TNR   G
Sbjct:  164 EKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHG 459          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: EWM25650.1 (ccr4-associated factor [Nannochloropsis gaditana])

HSP 1 Score: 559.7 bits (1441), Expect = 9.100e-156
Identity = 262/296 (88.51%), Postives = 281/296 (94.93%), Query Frame = 0
Query:  125 EGGEIPGIGPTRHIYTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQATNRQQQG 421
            E GEIPG+GPTRHIYT  DGKRMEIREVW+ENLD EM A+REVVE+YPYVAMDTEFPGVVARPVGDV+A+DYQYKTLKCNVDLLKIIQLGLSFAD++GNSPP+CPTWQ NF+FSL+DD+YAEDSIELLKQSGIDFSKHE HGIDV RFGELLMTSGLVLMD+VRWISFHSGYDFGYLLKVLTC+ALP+DENGFFDLLRTYFPCFYDIKYLMTAC GLHGGLQ+IAEELSVAR+GPMHQAGSDSLLTAQTFFRLC VSF+GL NLSDEKFKGELFGLGHNHTVYR+KMQ TNR   G
Sbjct:   11 EKGEIPGVGPTRHIYTGQDGKRMEIREVWLENLDKEMVAVREVVEQYPYVAMDTEFPGVVARPVGDVSASDYQYKTLKCNVDLLKIIQLGLSFADSDGNSPPECPTWQFNFRFSLSDDIYAEDSIELLKQSGIDFSKHESHGIDVFRFGELLMTSGLVLMDEVRWISFHSGYDFGYLLKVLTCAALPSDENGFFDLLRTYFPCFYDIKYLMTACQGLHGGLQRIAEELSVARVGPMHQAGSDSLLTAQTFFRLCAVSFDGLNNLSDEKFKGELFGLGHNHTVYRSKMQNTNRHGHG 306          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CEG62914.1 (Putative CCR4-NOT transcription complex subunit 7 [Rhizopus microsporus])

HSP 1 Score: 371.7 bits (953), Expect = 3.500e-99
Identity = 177/272 (65.07%), Postives = 215/272 (79.04%), Query Frame = 0
Query:  149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL-----GHNHTVYRNKMQAT 415
            I+EVW ENL+ EM  +R++VE YPY+AMDTEFPGVVARP+G   T++DY Y+TL+CNVDLLKIIQLG++FAD  GN P +  TWQ NFKFSL DDMYA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+DDV+WISFHSGYDFGYLLK+LTCS +PADE+ FFDLLRTYFPC YDIKYLM +C  L GGLQ IA++L VARIGP HQAGSDSLLT  TFF++  + F     + D+K+ G L+GL       N+T+ ++   AT
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNSNNTIMKSLTTAT 278          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: OBZ89232.1 (CCR4-NOT transcription complex subunit 7 [Choanephora cucurbitarum])

HSP 1 Score: 371.7 bits (953), Expect = 3.500e-99
Identity = 177/270 (65.56%), Postives = 213/270 (78.89%), Query Frame = 0
Query:  149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL----GHNHTVYRNKMQA 414
            I+EVW ENL+ EM  +R++VE YPY+AMDTEFPGVVARP+G   T++DY Y+TL+CNVDLLKIIQLG++FAD  GN P +  TWQ NFKF+L DDMYA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS +PADE  FF+LLRTYFPC YDIKYLM +C  L GGLQ IA++L VARIGP HQAGSDSLLT  TFF++  + F     + D+K+ G L+GL     H HT +   +QA
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSLMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGLKCSPQHTHTTHHQALQA 276          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: ORE22406.1 (CAF1-domain-containing protein [Rhizopus microsporus])

HSP 1 Score: 371.3 bits (952), Expect = 4.600e-99
Identity = 177/272 (65.07%), Postives = 215/272 (79.04%), Query Frame = 0
Query:  149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL-----GHNHTVYRNKMQAT 415
            I+EVW ENL+ EM  +R++VE YPY+AMDTEFPGVVARP+G   T++DY Y+TL+CNVDLLKIIQLG++FAD  GN P +  TWQ NFKFSL DDMYA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+DDV+WISFHSGYDFGYLLK+LTCS +PADE+ FFDLLRTYFPC YDIKYLM +C  L GGLQ IA++L VARIGP HQAGSDSLLT  TFF++  + F     + D+K+ G L+GL      +N+T  ++   AT
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEDYPYLAMDTEFPGVVARPIGSFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQHGNLPGNVCTWQFNFKFSLTDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKILTCSVMPADESEFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DKIDDQKYLGYLYGLKCSPTNNNNTTMKSLTTAT 278          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: XP_009033148.1 (hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens] >EGB12052.1 hypothetical protein AURANDRAFT_52324 [Aureococcus anophagefferens])

HSP 1 Score: 370.2 bits (949), Expect = 1.000e-98
Identity = 173/273 (63.37%), Postives = 214/273 (78.39%), Query Frame = 0
Query:  139 YTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPD-CPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNK 411
            +   DGK +EI++VW   LD EM  IRE+VE YPYVAMDTEFPGVVA+P+GD  +  YQY+TL+CNVDLLKIIQLG+SF D EG +P + C  +Q NF+F L +DMYAEDSI+LLK+SGIDF +H   GIDV RFGEL+M SGLVL DDV+W+SFHSGYDFGYL+K+LTC  LPADE GFF+LL  YFP  YD+K LMT  +GLHGGLQ++AE+L V RIGPMHQAGSDS+LT  TFFRL  ++F+    + +EK++G ++GLG +   YR K
Sbjct:   45 FPDKDGKMVEIKDVWASTLDAEMAVIRELVESYPYVAMDTEFPGVVAKPIGDAYSTGYQYQTLQCNVDLLKIIQLGISFCDGEGKTPEEGCYCFQFNFRFDLAEDMYAEDSIQLLKESGIDFHRHATEGIDVARFGELVMMSGLVLCDDVKWVSFHSGYDFGYLIKILTCQTLPADEQGFFELLALYFPTLYDVKLLMTHVDGLHGGLQRVAEDLKVERIGPMHQAGSDSMLTNATFFRLAELAFSSPEKV-EEKYRGAIYGLGEH--AYRGK 314          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: KFH71636.1 (hypothetical protein MVEG_01932 [Mortierella verticillata NRRL 6337])

HSP 1 Score: 370.2 bits (949), Expect = 1.000e-98
Identity = 171/258 (66.28%), Postives = 210/258 (81.40%), Query Frame = 0
Query:  145 KRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLG 402
            +R  IREVW ENLD EM  +R++V++YPY+AMDTEFPGVVARP+G+  T+ADY Y+TL+CNVDLLK+IQLG++FAD  GN P D  TWQ NFKF+L DDMYA+DSI+LL++SGI+F KHE +GIDV  FGELL++SG VL+D+V+WISFHSGYDFGYLLK+LTCS LPA+E  FFDLLRTYFPC YDIKYLM +C  L GGLQ++A +L V RIGP HQAGSDSLLT  TFF++  + F     + D K+ G L+GLG
Sbjct:    6 ERAIIREVWAENLDQEMALLRDLVDQYPYLAMDTEFPGVVARPIGNFRTSADYHYQTLRCNVDLLKMIQLGVTFADENGNVPKDACTWQFNFKFNLADDMYAQDSIDLLQKSGINFQKHEDYGIDVHHFGELLISSGFVLLDEVKWISFHSGYDFGYLLKILTCSPLPAEEGDFFDLLRTYFPCIYDIKYLMKSCKNLKGGLQELANDLQVVRIGPQHQAGSDSLLTCSTFFKMRQIFFE--DKIDDAKYLGYLYGLG 261          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CBN76829.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 369.8 bits (948), Expect = 1.300e-98
Identity = 175/272 (64.34%), Postives = 213/272 (78.31%), Query Frame = 0
Query:  139 YTSPDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPD-CPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNL----SDEKFKGELFGLGHNHT 406
            + +PDG+ +EIR VW +NL+ EM  IRE+VE YPYVAMDTEFPGVVARPVGD    D+QY+TL+CNVD+LK+IQLGLSFA+ +G  P D C TWQ NF F+L++DMYA DSI+LLK SGIDF  HE  GID+  FGELLMTSGLVL+ +V W+SFHSGYDFGYL+K+LTCS LP  E+ FFDLL+ YFP  YDIKYL+++ +G HGGL K+A++L V RIGPMHQAGSDSLLT Q F ++  V FNG+ NL    S  KF G+L+G G N T
Sbjct:   47 HRAPDGRLVEIRNVWADNLETEMVIIRELVEDYPYVAMDTEFPGVVARPVGDFNQPDFQYQTLRCNVDMLKMIQLGLSFANEKGELPEDGCCTWQFNFAFNLSEDMYAHDSIQLLKNSGIDFQGHERRGIDLQDFGELLMTSGLVLLPNVTWLSFHSGYDFGYLIKLLTCSNLPTQESDFFDLLQLYFPKIYDIKYLVSSQDGFHGGLNKLADDLKVERIGPMHQAGSDSLLTEQVFLKVADVYFNGVANLDQGKSRGKFAGQLYGYGGNQT 318          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: SAL99335.1 (hypothetical protein [Absidia glauca])

HSP 1 Score: 368.6 bits (945), Expect = 3.000e-98
Identity = 178/277 (64.26%), Postives = 219/277 (79.06%), Query Frame = 0
Query:  142 PDGKRMEIREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL--GHNHTVYRNKMQATN 416
            P      IREVW ENLD EM  +R++VE YPY++MDTEFPGVVARP+G   T++DY Y+TL+CNVDLLK+IQLG++FAD  GN P +  TWQ NFKF+L +DMYA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS++PADE+ FFDLLRTYFPCFYDIKYLM +C  L GGLQ IA++L VARIGP HQAGSDSLLT  TFF++  + F     + ++K+ G ++GL  G N +V ++   ATN
Sbjct:    2 PTNDSKYIREVWAENLDEEMVYMRDLVEDYPYLSMDTEFPGVVARPIGTFRTSSDYHYQTLRCNVDLLKVIQLGVTFADQYGNLPGNICTWQFNFKFNLEEDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSSMPADESEFFDLLRTYFPCFYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCSTFFKMRQMFFE--DKIDNQKYLGYIYGLRCGPNTSV-QSLTNATN 275          
BLAST of NO12G03930 vs. NCBI_GenBank
Match: CEP13830.1 (hypothetical protein [Parasitella parasitica])

HSP 1 Score: 367.9 bits (943), Expect = 5.100e-98
Identity = 172/253 (67.98%), Postives = 207/253 (81.82%), Query Frame = 0
Query:  149 IREVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDV-TAADYQYKTLKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL 401
            I+EVW ENL+ EM  +R++VE YPY+AMDTEFPGVVARP+G   T++DY Y+TL+CNVDLLKIIQLG++FAD  GN P +  TWQ NFKF+L+DDMYA+DSIELL +SGIDF KHE +GIDV  FGELL++SG VL+DDV+WISFHSGYDFGYLLKVLTCS +PADE  FF+LLRTYFPC YDIKYLM +C  L GGLQ IA++L VARIGP HQAGSDSLLT  TFF++  + F     + D+K+ G L+GL
Sbjct:    9 IKEVWAENLEEEMAYLRDLVEEYPYLAMDTEFPGVVARPIGTFKTSSDYHYQTLRCNVDLLKIIQLGVTFADQYGNLPGNICTWQFNFKFNLSDDMYAQDSIELLTKSGIDFKKHEEYGIDVEHFGELLISSGFVLLDDVKWISFHSGYDFGYLLKVLTCSVMPADETEFFELLRTYFPCIYDIKYLMKSCKNLKGGLQDIADDLQVARIGPQHQAGSDSLLTCTTFFKMRQMFFE--DRIDDQKYLGYLYGL 259          
The following BLAST results are available for this feature:
BLAST of NO12G03930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854806.19.100e-15688.51CCR4-NOT transcription complex subunit 7/8 [Nannoc... [more]
EWM25650.19.100e-15688.51ccr4-associated factor [Nannochloropsis gaditana][more]
CEG62914.13.500e-9965.07Putative CCR4-NOT transcription complex subunit 7 ... [more]
OBZ89232.13.500e-9965.56CCR4-NOT transcription complex subunit 7 [Choaneph... [more]
ORE22406.14.600e-9965.07CAF1-domain-containing protein [Rhizopus microspor... [more]
XP_009033148.11.000e-9863.37hypothetical protein AURANDRAFT_52324 [Aureococcus... [more]
KFH71636.11.000e-9866.28hypothetical protein MVEG_01932 [Mortierella verti... [more]
CBN76829.11.300e-9864.34conserved unknown protein [Ectocarpus siliculosus][more]
SAL99335.13.000e-9864.26hypothetical protein [Absidia glauca][more]
CEP13830.15.100e-9867.98hypothetical protein [Parasitella parasitica][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010384NSK010384Nannochloropsis salina (N. salina CCMP1776)gene


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593024gene_5572Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100037g9gene4868Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03930.4NO12G03930.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03930.3NO12G03930.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03930.2NO12G03930.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03930.1NO12G03930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03930.4NO12G03930.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03930.3NO12G03930.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03930.2NO12G03930.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03930.1NO12G03930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03930 ID=NO12G03930|Name=NO12G03930|organism=Nannochloropsis oceanica|type=gene|length=3326bp
ATGGCATCTAATTACAGGCAAACCCACCAACAACAGTACCGTTgtaaggt
gtgtcttctcgacgtgtggcgggcagcttctttgcctcactcgcccttta
cacatgtcccctccattctcactcctcctttatgaggagtacctttctgc
atggaatgatgatactgcccgtatttgtccctcccgcaaagcacttccac
caacccatgcatctctacaatcacagACTCATCCGCGGCGTCGCCTAAAT
CATCAGGCAGCAGCAGCAGTAAGGACCTCAAGAAAGGATCAAACGCAAGA
GAGCAAGAGGCCAGCCTGGGGTCTCTTCTCTTCCCCGgtcagtcattcag
cacatagcctctttcctcggccggcggcaaccaaccagcgccaccttttc
taccgcagAGGGGCAGCAGACAGCAGATTCACCACCAGCACCGCCAGGAC
CGGCGACCGGGGATCAGCAAGGAGGAGGAGGAGGAGGAGGAGGAGgtgga
ggaggaggaggtggaggaggaggaggaggaggagGTGGAGGAGGTGGAGG
GCAGCAGCAGCAACCACACCAGCAAATGGGCATGAATGGCGGCGACATCG
GGGGAAGCCAGGAAAGCAGTGCGGGAGAAGGAGgtgagtgtgatctatga
gtgacatgcttggttgcgtttttttcccctgttcaacggcaagtggcact
catttcaccctttccttccccccctctctctccccaatctagGCGAGATT
CCCGGCATAGGACCGACGCGGCACATCTACACGTCGCCCGATGGGAAGCG
GATGGAAATCAGGGAGGTCTGGGTCGAAAATTTGGACCTAGAGATGACCG
CTATCCGGGAGgttggtggagagggagggagggagggagggcaggataag
acacggagagcgaggtgaaggacaataaattgtcgtgccaacttcttaca
gtatcgaaggtacccacatttttatttttcacgcatcctcctctttctct
ccatccctcgctaagGTGGTGGAGAGGTATCCATACGTGGCAATGGACAC
GGAGTTTCCCGGCGTCGTTGCCCGGCCAGTCGGAGACGTGACGGCCGCAG
ATTATCAATACAAGACCTTGAAGTGCAATGTGGATTTGCTGAAGgtaaaa
gaaggagggagaacaggagagtagcagggaagggttgtgcgtgttcgact
tctaccagacgaccgacatgcgggccccgccctccgtcccccactgcttc
cgtccctttcatctctcttagATCATCCAGCTAGGCCTCTCCTTTGCCGA
TGCCGAGGGCAACAGCCCCCCAGACTGTCCCACCTGGCAGCTCAACTTCA
AATTTTCTCTAAACGACGACATGTACGCCGAGGACTCGATCGAGCTGTTG
AAGCAGAGCGGGATTGATTTCTCGAAGCATGAGgtgagaagggtgggagg
gggagggggaagtagggagggataaccctgattgtgctgtcaacaaactg
tgcgatattgacgacctctgtcttcagcctccatttattctccccctctc
ccaccctcattcatttccccccgcagCATCATGGCATCGACGTGCCCCGG
TTCGGGGAGCTGCTCATGACTAGCGGCCTGGTGCTGATGGACGATGTGCG
TTGGATCTCTTTTCACTCGGGCTATGACTTCGGATATCTGCTTAAGGTGC
TCACCTGCTCCGCCTTGCCCGCCGATGAGAATGGgtgcgtcgtctctccc
ttcctccctccctccctccctccctccctccctccctccctccctccctc
cattgtgtatgcgcgtgcgaacaaatcagcggactagtaggtgtcacatc
agcggcctagtaggtgtcacgtcagtaatttgtcttacaccattcaccgt
tgcctcccgtccctccctccctccctcccttgtcgtcagATTCTTCGACC
TTCTTCGCACTTATTTCCCCTGCTTCTACGACATCAAGTATCTCATGACG
GCCTGTAATGGCCTACACGGAGGCCTCCAGAAAATCGgtacgtcctccct
tcaccccccccccccctccttcccatatcccctgaaacagtcacctcgta
ttgcatcttcgactccctcttcccctccattgctctctccctctggtgtg
gcctgtgctacctccgtacaagctggcagcaaaaccctctgtctcacata
cgcatcgccctccccccttccctccccctctttctctctgcagCCGAAGA
GCTGTCCGTGGCACGCATAGGCCCTATGCACCAAGCCGGCAGCGACTCCC
TCCTGACCGCACAGACCTTCTTCCGCCTTTGCACGGTCTCCTTCAACGGC
CTCGGCAATCTGAGCGACGAGAAGTTCAAGGGCGAGCTCTTCGGgtgcgt
ctcggtttcttccttccccgtcttatcctctttcttctcgttgagtgctc
tctcttccccctatttacccactcctttttttgggccctataccctcctc
tctcttccttcctccctccttagACTGGGGCATAACCATACGGTGTACCG
GAACAAGATGCAGGCCACCAACCGACAGCAACAAGGCCATGGCCACGGAG
gtaaggaagctcacagacatgtacactcacccgacctgctctctgtcccc
ccttttctccgtcctctgtctttcttggtgtgtaaacctcatttctaaca
acgtttctctcttcactagcgcaaatgatccacctgcctctccctttcct
ccctccctccatacttccctccttcccttccctccctcttcctctctcca
gGGCACGGCGGGCATGGACAAGCCCCCCCTGCACTCGAGCGGAATGACTC
GACCAGCAGTTCTCAGTCTGTCGCAGTGTCAACTTCGGCAGCGGGAAAGA
CAGgtaggtcagatagaggacattcgggagggagggaagagaaagggtgg
gagcggatgcagggctggtgcatttgctctgatatctgttttgctgaaca
tcttcctcctcaagttccccacccattccgagtactttactggatgcctt
ctcttatctttaaaataccacaacaccagcagCAGACAGCGCCGCCTCGC
CCACGACAACAGGCGCCTCTGGAGGGATTGATGGGGACGAAAAGCTCGTG
CCAGAGGAATACACGGCCACTGGAGGGTCTTGAGGAAGAAGCGTTAGAGC
GATGACGACGTGTATGTAAAGGAGGTTTGAGGGACCGAGAGGAGGGAAGC
AAAAGGAGAAAAGAGAGTTAGTGGGTGTGAATTGGTTAGGCACTTTATTC
CCTAAAAAAGGAAACAGCTCAAGCCG
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protein sequence of NO12G03930.4

>NO12G03930.4-protein ID=NO12G03930.4-protein|Name=NO12G03930.4|organism=Nannochloropsis oceanica|type=polypeptide|length=457bp
MASNYRQTHQQQYRYSSAASPKSSGSSSSKDLKKGSNAREQEASLGSLLF
PEGQQTADSPPAPPGPATGDQQGGGGGGGGGGGGGGGGGGGGGGGGGGGQ
QQQPHQQMGMNGGDIGGSQESSAGEGGEIPGIGPTRHIYTSPDGKRMEIR
EVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKT
LKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIE
LLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGY
LLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAE
ELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL
GHNHTVYRNKMQATNRQQQGHGHGGKEAHRHVHSPDLLSVPPFLRPLSFL
VCKPHF*
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protein sequence of NO12G03930.3

>NO12G03930.3-protein ID=NO12G03930.3-protein|Name=NO12G03930.3|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MASNYRQTHQQQYRYSSAASPKSSGSSSSKDLKKGSNAREQEASLGSLLF
PEGQQTADSPPAPPGPATGDQQGGGGGGGGGGGGGGQQQQPHQQMGMNGG
DIGGSQESSAGEGGEIPGIGPTRHIYTSPDGKRMEIREVWVENLDLEMTA
IREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQL
GLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHE
HHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPAD
ENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQA
GSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQA
TNRQQQGHGHGGKEAHRHVHSPDLLSVPPFLRPLSFLVCKPHF*
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protein sequence of NO12G03930.2

>NO12G03930.2-protein ID=NO12G03930.2-protein|Name=NO12G03930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MASNYRQTHQQQYRYSSAASPKSSGSSSSKDLKKGSNAREQEASLGSLLF
PEGQQTADSPPAPPGPATGDQQGGGGGGGGGGGGGGGGGGGGGGGGGGGQ
QQQPHQQMGMNGGDIGGSQESSAGEGGEIPGIGPTRHIYTSPDGKRMEIR
EVWVENLDLEMTAIREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKT
LKCNVDLLKIIQLGLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIE
LLKQSGIDFSKHEHHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGY
LLKVLTCSALPADENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAE
ELSVARIGPMHQAGSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGL
GHNHTVYRNKMQATNRQQQGHGHGGHGGHGQAPPALERNDSTSSSQSVAV
STSAAGKTADSAASPTTTGASGGIDGDEKLVPEEYTATGGS*
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protein sequence of NO12G03930.1

>NO12G03930.1-protein ID=NO12G03930.1-protein|Name=NO12G03930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MASNYRQTHQQQYRYSSAASPKSSGSSSSKDLKKGSNAREQEASLGSLLF
PEGQQTADSPPAPPGPATGDQQGGGGGGGGGGGGGGQQQQPHQQMGMNGG
DIGGSQESSAGEGGEIPGIGPTRHIYTSPDGKRMEIREVWVENLDLEMTA
IREVVERYPYVAMDTEFPGVVARPVGDVTAADYQYKTLKCNVDLLKIIQL
GLSFADAEGNSPPDCPTWQLNFKFSLNDDMYAEDSIELLKQSGIDFSKHE
HHGIDVPRFGELLMTSGLVLMDDVRWISFHSGYDFGYLLKVLTCSALPAD
ENGFFDLLRTYFPCFYDIKYLMTACNGLHGGLQKIAEELSVARIGPMHQA
GSDSLLTAQTFFRLCTVSFNGLGNLSDEKFKGELFGLGHNHTVYRNKMQA
TNRQQQGHGHGGHGGHGQAPPALERNDSTSSSQSVAVSTSAAGKTADSAA
SPTTTGASGGIDGDEKLVPEEYTATGGS*
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