NO12G03730, NO12G03730 (gene) Nannochloropsis oceanica

Overview
NameNO12G03730
Unique NameNO12G03730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1143
Alignment locationchr12:1034532..1035674 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:1034532..1035674 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR019410Nicotinamide_N-MeTfrase-like
Homology
BLAST of NO12G03730 vs. NCBI_GenBank
Match: XP_008869634.1 (hypothetical protein H310_06367 [Aphanomyces invadans] >ETW01786.1 hypothetical protein H310_06367 [Aphanomyces invadans])

HSP 1 Score: 83.6 bits (205), Expect = 1.500e-12
Identity = 61/179 (34.08%), Postives = 86/179 (48.04%), Query Frame = 0
Query:   19 DEVDFGNLAGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPW--LIKGQRVVELGCGVGAVGLLA-SRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMYYNVD 195
            + V+FG+ AG+    Q     +N  C T          D TGLRVY+GAQ M RFL       L++G+RV+ELGCG G +G +A +R   + +VLTDG    + L QRN+     + S+ P                 S A  +L W +        +   +  FDVV+G DLMYY  +
Sbjct:    6 ETVEFGD-AGTYSFFQYGSADYNHMCLTSN----SASQDSTGLRVYSGAQVMARFLASADGLALLRGKRVIELGCGTGVIGCVAGARAILSDLVLTDGDERAVALAQRNLE--HVVHSIKPEL---------------STACRQLYWGAS-------YPPSLGAFDVVLGCDLMYYQTN 155          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: XP_012200147.1 (hypothetical protein SPRG_19922 [Saprolegnia parasitica CBS 223.65] >KDO29259.1 hypothetical protein SPRG_19922 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 80.9 bits (198), Expect = 9.600e-12
Identity = 85/324 (26.23%), Postives = 120/324 (37.04%), Query Frame = 0
Query:   12 VDGIGMVDEVDFGNLAGSIKLVQLSYGAFNERC----KTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPW--LIKGQRVVELGCGVGAVG-LLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMYYNVDASVVLTAATCLLDGRVXXXXXXXXXXXXXXXXXXXXEPPYKVNKDEREGCTNSGLAFGKRRSESEGKGGIILLAHIFRGAHLPYTLLAAAESLGWALLEVPMEEVVSEEGEGGGEGRVPGTTPEWWGSMCVLVG 329
            +D +  +++VDFG   G+  + Q     FN+ C     TH+        D TGLRVY GA  + RFL   P   L+   R+VELGCG GAVG + A       +++TDG    + L QRNV                 H   +A  +L + A   L     + + D         FD+VIG +LMYY  +   +L     L+D                                                       G+ L AH+FR       + A     GWA L VP+   V  E     E R+    P W  + C++ G
Sbjct:    1 MDPLIALEDVDFG-ATGTFPMYQYRQAQFNQLCLGANSTHQ--------DATGLRVYAGAHVLARFLGSTPGRALLHDARLVELGCGTGAVGSVTAVTASVKKLLVTDGDARAVALAQRNV----------------QHTVHAAKPALDTSASQLLWGPGPSTVGD---------FDIVIGCELMYYKTNLDALLATVLALVD----------------------------------------------------AANGLFLHAHLFRKDEHDADMTAFLTKAGWATLAVPVPSFVPYE-----EMRL---WPNWLNTCCLVSG 230          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: OQS01665.1 (hypothetical protein ACHHYP_00416 [Achlya hypogyna])

HSP 1 Score: 78.6 bits (192), Expect = 4.800e-11
Identity = 66/198 (33.33%), Postives = 92/198 (46.46%), Query Frame = 0
Query:   12 VDGIGMVDEVDFGNLAGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLY--RFPWLIKGQRVVELGCGVGAVGLLASRLGP-TCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMYYNVDASVVLTAATCLL 207
            +D +  +++VDFG  AG+  + Q     FN+ C            D TGLRVY GA  + RFL       L++   +VELGCG GAVG   +   P   +++TDG      L QRNV T  A                +A  +LP+ A  +L W   AA  D      V +FDV IG +LMYY  +   +L+    L+
Sbjct:    1 MDPLVALEDVDFG-AAGTFPIYQYRQANFNQLCLGAN----SSSQDATGLRVYAGAHVLARFLASPAAAALLRDASLVELGCGTGAVGAATAVAAPLKRLLVTDGDERACALAQRNVETTVA----------------TAKPALPAAAA-QLLWG--AASYD------VGRFDVAIGCELMYYKTNLDALLSTVLTLV 168          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: XP_008612908.1 (hypothetical protein SDRG_08789 [Saprolegnia diclina VS20] >EQC33685.1 hypothetical protein SDRG_08789 [Saprolegnia diclina VS20])

HSP 1 Score: 78.2 bits (191), Expect = 6.200e-11
Identity = 80/323 (24.77%), Postives = 122/323 (37.77%), Query Frame = 0
Query:   12 VDGIGMVDEVDFGNLAGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPW--LIKGQRVVELGCGVGAVG-LLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMYYNVDASVVLTAATCLLDGRVXXXXXXXXXXXXXXXXXXXXEPPYKVNKDEREGCTNSGLAFGKRRSESEGKGGIILLAHIFRGAHLPYTLLAAAESLGWALLEVPMEEVVSEEGEGGGEGRVPGTTPEWWGSMCVLVGVRD 332
            +D +  +++VDFG   G+  + Q     FN+ C          + D TGLRVY GA  + RFL   P   L+   R+VELGCG GAVG + A       +++TDG    + L QRNV                 H   +A  +L + +  +L W    +         V  FD+VIG +LMYY  +   +L+    L++                                                       G+ L AH+FR       + A    +GWA L  P+   V  +     E R+    P W  + C++ G ++
Sbjct:    1 MDPLVALEDVDFG-ATGTFPMYQYRQAQFNQLCLGAN----STNQDATGLRVYAGAHVLARFLGSTPCRALLHDARLVELGCGTGAVGSVTAVTASVKKLLVTDGDARAVALAQRNV----------------QHTVQTAKPAL-NASARQLLWGPGPS--------TVGDFDIVIGCELMYYKTNLDALLSTVLALVN----------------------------------------------------NANGLFLHAHLFRKDEHDADMTAFLSKVGWATLAAPVPSFVPYD-----EMRL---WPNWLNTCCLVSGPKE 233          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: XP_015884415.1 (PREDICTED: uncharacterized protein LOC107420064 [Ziziphus jujuba] >XP_015884416.1 PREDICTED: uncharacterized protein LOC107420064 [Ziziphus jujuba])

HSP 1 Score: 72.0 bits (175), Expect = 4.500e-9
Identity = 57/188 (30.32%), Postives = 96/188 (51.06%), Query Frame = 0
Query:   23 FGNL-AGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPWLIKGQRVVELGCG-VGAVGLLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDK--FDVVIGTDLMYYNVDASVVLTAATCLL 207
            FG L +G  +  ++++  FN + K     E +     TGL ++  A+ M   L R P ++ G+RV+ELGCG VG   ++A+R    CV+ TDG ++ L+L  +NVA+     +L P F             L  L   +L+W +   I  +   +KV+   FD+++GTD+ Y +   S + + A  L+
Sbjct:  306 FGILPSGDNETTEINFEDFNFKIKM-LSKEYQHTCKSTGLMLWESARLMASVLARNPTIVAGKRVLELGCGCVGICSMVAARFA-ECVIATDGDIKALDLLTQNVAS-----NLRPPF-------------LDKLMTMRLEWGNRDHIETI---KKVNSRGFDIILGTDVTYVSEAISPLFSTAKELI 470          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: XP_015902648.1 (PREDICTED: uncharacterized protein LOC107435529 [Ziziphus jujuba])

HSP 1 Score: 72.0 bits (175), Expect = 4.500e-9
Identity = 57/188 (30.32%), Postives = 96/188 (51.06%), Query Frame = 0
Query:   23 FGNL-AGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPWLIKGQRVVELGCG-VGAVGLLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDK--FDVVIGTDLMYYNVDASVVLTAATCLL 207
            FG L +G  +  ++++  FN + K     E +     TGL ++  A+ M   L R P ++ G+RV+ELGCG VG   ++A+R    CV+ TDG ++ L+L  +NVA+     +L P F             L  L   +L+W +   I  +   +KV+   FD+++GTD+ Y +   S + + A  L+
Sbjct:  266 FGILPSGDNETTEINFEDFNFKIKM-LSKEYQHTCKSTGLMLWESARLMASVLARNPTIVAGKRVLELGCGCVGICSMVAARFA-ECVIATDGDIKALDLLTQNVAS-----NLRPPF-------------LDKLMTMRLEWGNRDHIETI---KKVNSRGFDIILGTDVTYVSEAISPLFSTAKELI 430          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: GBG26194.1 (Protein N-lysine methyltransferase METTL21A [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 72.0 bits (175), Expect = 4.500e-9
Identity = 45/146 (30.82%), Postives = 73/146 (50.00%), Query Frame = 0
Query:   63 VYTGAQAMVRFLYRFPWLIKGQRVVELGCGVGAVGLLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMYYNVDASVVLTAATCLLDG 209
            V+  A+ M R+    P L++G+R++ELG G G  G+  +RLG   VVLTD +  ++EL Q N+               +S G   + A        +L W   AA  ++L    ++ FD+V+GTD++Y       +L +A   L+G
Sbjct:  168 VWPSAEEMARYFTANPSLVRGKRILELGSGTGLCGITMARLGAASVVLTDYNEASVELLQENI-------------DLNSAGDVCSTA--------RLVWGDDAACAEILEGMGLEHFDLVVGTDVVYEPECIQPLLQSARAFLNG 292          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: XP_012451421.1 (PREDICTED: uncharacterized protein LOC105773823 [Gossypium raimondii] >XP_012451422.1 PREDICTED: uncharacterized protein LOC105773823 [Gossypium raimondii] >KJB65509.1 hypothetical protein B456_010G098400 [Gossypium raimondii] >KJB65512.1 hypothetical protein B456_010G098400 [Gossypium raimondii])

HSP 1 Score: 71.6 bits (174), Expect = 5.800e-9
Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 0
Query:   16 GMVDEVDFGNLAGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPWLIKGQRVVELGCGVGAVGLLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMY 191
            GM  E+ FG L    +++++  G  + + K     E +     TGL ++  A+ M   L R P ++ G+RV+ELG G G +  + +    + +V TDG    LEL  +N+     + +L P F             L  L + KL+W +   I D + A   + F+V+IGTD+ Y
Sbjct:  307 GMAVEM-FGALTNDTEVIEIELGGCDIKIKV-LSKEYQHTCKSTGLMLWESARLMAAILARNPSIVAGKRVLELGSGCGGICSMVAVRSASIMVATDGDRTALELLNQNI-----ISNLRPPF-------------LTKLVIKKLEWGNRDDI-DAIKAMNNEGFEVIIGTDVTY 460          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: KJB65510.1 (hypothetical protein B456_010G098400 [Gossypium raimondii])

HSP 1 Score: 71.6 bits (174), Expect = 5.800e-9
Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 0
Query:   16 GMVDEVDFGNLAGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPWLIKGQRVVELGCGVGAVGLLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMY 191
            GM  E+ FG L    +++++  G  + + K     E +     TGL ++  A+ M   L R P ++ G+RV+ELG G G +  + +    + +V TDG    LEL  +N+     + +L P F             L  L + KL+W +   I D + A   + F+V+IGTD+ Y
Sbjct:  272 GMAVEM-FGALTNDTEVIEIELGGCDIKIKV-LSKEYQHTCKSTGLMLWESARLMAAILARNPSIVAGKRVLELGSGCGGICSMVAVRSASIMVATDGDRTALELLNQNI-----ISNLRPPF-------------LTKLVIKKLEWGNRDDI-DAIKAMNNEGFEVIIGTDVTY 425          
BLAST of NO12G03730 vs. NCBI_GenBank
Match: KJB65511.1 (hypothetical protein B456_010G098400 [Gossypium raimondii])

HSP 1 Score: 71.6 bits (174), Expect = 5.800e-9
Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 0
Query:   16 GMVDEVDFGNLAGSIKLVQLSYGAFNERCKTHKGDEIEEDGDRTGLRVYTGAQAMVRFLYRFPWLIKGQRVVELGCGVGAVGLLASRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVASLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMY 191
            GM  E+ FG L    +++++  G  + + K     E +     TGL ++  A+ M   L R P ++ G+RV+ELG G G +  + +    + +V TDG    LEL  +N+     + +L P F             L  L + KL+W +   I D + A   + F+V+IGTD+ Y
Sbjct:  246 GMAVEM-FGALTNDTEVIEIELGGCDIKIKV-LSKEYQHTCKSTGLMLWESARLMAAILARNPSIVAGKRVLELGSGCGGICSMVAVRSASIMVATDGDRTALELLNQNI-----ISNLRPPF-------------LTKLVIKKLEWGNRDDI-DAIKAMNNEGFEVIIGTDVTY 399          
The following BLAST results are available for this feature:
BLAST of NO12G03730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008869634.11.500e-1234.08hypothetical protein H310_06367 [Aphanomyces invad... [more]
XP_012200147.19.600e-1226.23hypothetical protein SPRG_19922 [Saprolegnia paras... [more]
OQS01665.14.800e-1133.33hypothetical protein ACHHYP_00416 [Achlya hypogyna... [more]
XP_008612908.16.200e-1124.77hypothetical protein SDRG_08789 [Saprolegnia dicli... [more]
XP_015884415.14.500e-930.32PREDICTED: uncharacterized protein LOC107420064 [Z... [more]
XP_015902648.14.500e-930.32PREDICTED: uncharacterized protein LOC107435529 [Z... [more]
GBG26194.14.500e-930.82Protein N-lysine methyltransferase METTL21A [Auran... [more]
XP_012451421.15.800e-929.14PREDICTED: uncharacterized protein LOC105773823 [G... [more]
KJB65510.15.800e-929.14hypothetical protein B456_010G098400 [Gossypium ra... [more]
KJB65511.15.800e-929.14hypothetical protein B456_010G098400 [Gossypium ra... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03730.1NO12G03730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|566724gene_5551Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03730.1NO12G03730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03730 ID=NO12G03730|Name=NO12G03730|organism=Nannochloropsis oceanica|type=gene|length=1143bp
ATGTCTTTGACGGCGCCCTTGCCACCCGCCCCAGTGGACGGCATCGGCAT
GGTGGACGAGGTCGACTTTGGGAATTTGGCGGGCTCGATCAAACTTGTCC
AACTTTCTTACGGGGCATTCAATGAGAGGTGCAAGACACACAAAGGCGAC
GAGATAGAAGAAGACGGGGACCGTACCGGGCTGCGAGTCTACACTGGGGC
ACAAGCCATGGTCCGATTCCTGTACCGCTTCCCATGGCTGATAAAAGGAC
AGCGTGTGGTGGAACTGGGATGTGGGGTGGGCGCCGTGGGACTGTTAGCG
TCCCGATTGGGGCCGACGTGCGTAGTGCTGACGGACGGAAGTGTAGAAAC
GCTGGAACTGACGCAAAGGAACGTGGCTACCTTTCAAGCTTTACCCTCGT
TGTCCCCCGGGTTTTCTCCATCTTCGCACGGAAGTACTTCAGCTGTCGCC
TCCCTTCCCTCCCTTGCTGTGCACAAGCTGCAGTGGGACTCGCACGCTGC
CATCGTTGATTTGTTACACGCGCAAAAAGTGGACAAATTTGATGTTGTGA
TAGGCACGGACCTCATGTACTATAACGTAGATGCCTCGGTGGTATTGACG
GCCGCGACTTGCTTGCTGGATGGGAGGGTAAAAAAAAGAGAAAAAGAAGG
GGGAGGAGGTGGAGGAGGACGAAAGGTGGGAGAAGAGAGCGAACCCCCAT
ACAAAGTGAACAAAGATGAGCGAGAAGGGTGTACTAACAGCGGACTTGCG
TTCGGCAAGAGGAGAAGTGAGAGCGAGGGTAAGGGTGGCATCATCCTCCT
CGCGCATATATTCCGCGGAGCCCATCTTCCTTACACACTCTTGGCGGCCG
CAGAGTCCCTGGGATGGGCCTTGTTGGAGGTGCCGATGGAGGAGGTCGTC
TCGGAGGAAGGGGAGGGAGGGGGGGAGGGAAGAGTACCCGGAACAACGCC
GGAGTGGTGGGGGAGCATGTGTGTGTTGGTGGGGGTGAGGGATGGAGGGA
GGGAGGAAGGGAAGGAAGAAATGCTTGCGCGTTTGCCGCAGGGGAGTCGG
GTTTTTGTGCCATATTGGAAGGAGGGAGGGGAGGGAGGGGGGGAGGAAGA
CGAGGAGTTGTGGTCCTGGCAGTTACCACGTGCAATAAACTAG
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protein sequence of NO12G03730.1

>NO12G03730.1-protein ID=NO12G03730.1-protein|Name=NO12G03730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=381bp
MSLTAPLPPAPVDGIGMVDEVDFGNLAGSIKLVQLSYGAFNERCKTHKGD
EIEEDGDRTGLRVYTGAQAMVRFLYRFPWLIKGQRVVELGCGVGAVGLLA
SRLGPTCVVLTDGSVETLELTQRNVATFQALPSLSPGFSPSSHGSTSAVA
SLPSLAVHKLQWDSHAAIVDLLHAQKVDKFDVVIGTDLMYYNVDASVVLT
AATCLLDGRVKKREKEGGGGGGGRKVGEESEPPYKVNKDEREGCTNSGLA
FGKRRSESEGKGGIILLAHIFRGAHLPYTLLAAAESLGWALLEVPMEEVV
SEEGEGGGEGRVPGTTPEWWGSMCVLVGVRDGGREEGKEEMLARLPQGSR
VFVPYWKEGGEGGGEEDEELWSWQLPRAIN*
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Synonyms
Publications