NO12G03530, NO12G03530 (gene) Nannochloropsis oceanica

Overview
NameNO12G03530
Unique NameNO12G03530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1611
Alignment locationchr12:965814..967424 -

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosylmethionine mitochondrial carrier protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:965814..967424 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
IPR002067Mit_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO12G03530 vs. NCBI_GenBank
Match: EWM25692.1 (s-adenosylmethionine mitochondrial carrier protein [Nannochloropsis gaditana])

HSP 1 Score: 604.4 bits (1557), Expect = 3.500e-169
Identity = 302/345 (87.54%), Postives = 321/345 (93.04%), Query Frame = 0
Query:  192 SFRFPFFRPSLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKPLREGGREGGMAAGWEGMKAWARRRVPSLAPGSESPLSEPPLSEIFDEIEDAN 537
            SF F  F P+LPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKG+ EL+NLN QILTRGAGAQFALSLPHGALAFAVLEATK+TLSSWFPV FAGPAFDFVSSAVSTT+CSVISTPQMVLTDRIMAGYYPNL++GV TV+K DGV+GLYAGWFAALAQKIPSYGLTWVFFQQLK+AR RW++HEATN ENFGMGA AAAATVCVMIPLDTVKTRIVTQAANP AGVHYKGV DCF+RVL+EEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEK  RE  REGG   GW+ +KAW RR+VPSLAP S+SPLS+PPLSEIFDEIEDAN
Sbjct:  201 SFAFSSFLPTLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGAGELANLNVQILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNFAGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAAAATVCVMIPLDTVKTRIVTQAANPAAGVHYKGVWDCFSRVLKEEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKGPREERREGG---GWDAVKAWGRRKVPSLAPESDSPLSQPPLSEIFDEIEDAN 542          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CBN76640.1 (Putative mitochondrial carrier protein PET8 [Ectocarpus siliculosus])

HSP 1 Score: 318.9 bits (816), Expect = 2.900e-83
Identity = 165/273 (60.44%), Postives = 206/273 (75.46%), Query Frame = 0
Query:  211 LTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGS-AELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPE 483
            LTFWG M+AGAVSRS AQT++HPANV+KTLLQTKGS   +  L +  L+RGAGAQF LSLP+GAL FAVLE TK+ ++  FP+  A    DF S + +T LCSV+STPQMVLT+RIMAG YPNL  GV ++++  G RG YAGW+  L QKIPSYGLTWV FQQ+K    R      +N ENF +G  AAA +V +MIP+DTVKTR+VTQ++   + V Y G+ +CFTR+LREEG+ +FY  L+PRLVSVVPMIG+Q+ VYEFMKR +A +PE
Sbjct:  125 LTFWGCMVAGAVSRSVAQTSLHPANVIKTLLQTKGSFRAILPLTWTTLSRGAGAQFLLSLPNGALHFAVLENTKSRMAEMFPLKTASFLLDFASCSAATALCSVMSTPQMVLTNRIMAGVYPNLWTGVRSIIQEKGARGFYAGWWPGLVQKIPSYGLTWVLFQQVKDLHYRMAKRLPSNTENFWLGCIAAAGSVTIMIPMDTVKTRLVTQSS--ASTVMYSGIFNCFTRMLREEGVTSFYNSLSPRLVSVVPMIGVQYLVYEFMKRLMAEVPE 395          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CBJ30331.1 (mitochondrial energy transfer protein [Ectocarpus siliculosus])

HSP 1 Score: 312.0 bits (798), Expect = 3.600e-81
Identity = 169/277 (61.01%), Postives = 203/277 (73.29%), Query Frame = 0
Query:  217 MLAGAVSRSCAQTAMHPANVVKTLLQTKGSA-ELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGF---AGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAG-VHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTI---AGMPEKPL 486
            M AGAVSRS AQT M PANVVKTLLQ +G+A +LSNL+F++LTRGAGAQF +SLPHGA  +A LE      +  FP  +   AGP  DF+SS+V+T +CSV+STPQMVLTDRIMAG YPNL +GV  + +  G+ G Y GW A +AQKIPSYGLTWVFFQQ K    +  +   TN ENF +GA AA ATVC+MIP+DTVKTR+VTQ A   AG V YKGVL   TR++REEGL   Y  L PRLVSVVPMIGIQFG+YEF+++ +    G  +KPL
Sbjct:    1 MFAGAVSRSIAQTCMQPANVVKTLLQGRGTASQLSNLSFKLLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAGATVCIMIPMDTVKTRLVTQTA--QAGVVPYKGVLQTLTRIVREEGLGPIYRSLTPRLVSVVPMIGIQFGIYEFVRKELMNRKGEEKKPL 275          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CEM38396.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 285.4 bits (729), Expect = 3.600e-73
Identity = 157/290 (54.14%), Postives = 200/290 (68.97%), Query Frame = 0
Query:  201 SLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNL---NFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVH-YKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKPLR 487
            SLP LH    LTFWGNMLAGA+SRS AQTA+HP   VKTLLQ + + +       +  I  RGAGAQF +SLPHGA+ FAVL   K  ++   P+  AG  FDF S A +T LCSVISTPQMVL DRI+ G YPNL++G+S +++ +GVRGLY GWF  + QKIPSY LTWV +QQL+   +     + ++AENF +GA AA   V +MIP+DTVKTR+VTQA   +  V  YKG++DCF RV++EEG+   Y  L  RL+SVVPMIGIQFGVYE++K  +   P   ++
Sbjct:  105 SLP-LHDKGKLTFWGNMLAGALSRSVAQTAVHPLIGVKTLLQGRNTWQGWGYFLGHPGIWWRGAGAQFLISLPHGAMNFAVLGFMKHQMTRLMPIKQAGFVFDFCSQASATFLCSVISTPQMVLVDRIVTGIYPNLVSGLSKLLRTEGVRGLYTGWFPGMIQKIPSYSLTWVAYQQLRNLHSVIFPRDPSDAENFLIGATAAGIVVAIMIPVDTVKTRLVTQAT--LGAVQPYKGIIDCFLRVIKEEGVGRLYRALPMRLMSVVPMIGIQFGVYEYVKSRLLSDPHMAVK 391          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: OEU09974.1 (mitochondrial carrier [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 282.3 bits (721), Expect = 3.100e-72
Identity = 155/287 (54.01%), Postives = 190/287 (66.20%), Query Frame = 0
Query:  209 KTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQ-TKGSAELSNLN------FQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVG--------FAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKRTIAGM 481
            + L FW +M++GAVSRS AQT MHPAN +KT++Q T G + L+  +      F+ L+ GAGA F LSLPHGA  FAVLEA +  +SS               GP  DF+SSA++T  CSV+STPQM++TD IMAG YPNLI+  S +    GV G Y GW+  L  KIPSY LTW FFQQLK  R    +  A N EN  MG  A+AA VC+MIP+DT+KTR+VTQ A     + YKG++DC  RV REEG+ TFY  L PRL+SVVPMIGIQFGVYE MKR +  M
Sbjct:   84 RPLYFWESMVSGAVSRSIAQTVMHPANTMKTMMQSTVGPSRLTLRDLIKPQMFRRLSVGAGANFILSLPHGAFNFAVLEAVRAQMSSLVESNPKLERNKEKMGPGLDFISSAIATICCSVVSTPQMMITDNIMAGNYPNLISASSGLYTDRGVMGFYTGWWPGLVGKIPSYALTWTFFQQLKRVRNIMSDRPAKNYENTIMGCVASAACVCIMIPMDTIKTRLVTQVA-MKGNIPYKGIIDCGLRVAREEGINTFYRGLTPRLMSVVPMIGIQFGVYEAMKREVTKM 369          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: XP_002286310.1 (mitochondrial energy transfer protein, partial [Thalassiosira pseudonana CCMP1335] >EED95951.1 mitochondrial energy transfer protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 275.8 bits (704), Expect = 2.900e-70
Identity = 150/271 (55.35%), Postives = 183/271 (67.53%), Query Frame = 0
Query:  213 FWGNMLAGAVSRSCAQTAMHPANVVKTLLQTK----GSAELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVG-FA-------GPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYE 472
            FW  M+ GA+SRS AQT MHPAN +KT+LQ+     G   LSN     LTRGAGAQ  LS+PHGA+ FAVLE  +  +++      +A       GP  DF+SSA+ST  CSV+STPQM++ D IMAG YPNL+   + +MK  GV G Y GW+  +A KIPSYGLTW  F+Q+K  RTR     A + EN  MG  A+A TVC+MIP+DTVKTR+VTQ   P   V YKG+ DCF RVL+EEG+  FY  L PRL+SVVPMIGIQFGVYE
Sbjct:    1 FWEAMICGAISRSAAQTIMHPANTMKTILQSSRSVPGKTPLSN-----LTRGAGAQLILSIPHGAVNFAVLEFVRRQMNNVVSQSRYADAINRNFGPGMDFLSSALSTICCSVVSTPQMMICDNIMAGTYPNLVAATNGLMKDRGVAGFYTGWWPGIAGKIPSYGLTWTLFEQIKRVRTRMFKRPAKDIENSIMGCIASATTVCIMIPMDTVKTRLVTQMNYPDL-VAYKGINDCFRRVLQEEGIGAFYRGLTPRLLSVVPMIGIQFGVYE 265          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: GAX26310.1 (hypothetical protein FisN_16Lh148 [Fistulifera solaris])

HSP 1 Score: 271.6 bits (693), Expect = 5.400e-69
Identity = 154/292 (52.74%), Postives = 185/292 (63.36%), Query Frame = 0
Query:  199 RPSLP-----ALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNL----NFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSW-----FPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWL-NHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKR 476
            RP+ P      L   + L FW NM+ GA+SRS AQT MHPAN  KTLLQ+        L     F  L+ GAGA   LSLPHGA+ FAVLEA +  L         P  F  PA DFVSS +ST  CS +STPQMV+ D IMAG YP+L   ++ +  + GV G Y GW   L  KIP+Y LTW FFQ+ K  R R + +  A+N EN  MG+ A+A TVC+MIP+DT+KTR+VTQA   +    YKG++DC   VLREEGL +FY  L PRLVSVVPMIGIQFGVYE MKR
Sbjct:  110 RPARPTSQKTTLATIRPLVFWENMVCGAISRSVAQTVMHPANTCKTLLQSSPDYRFRELLKPSMFHRLSIGAGANLLLSLPHGAINFAVLEAVRHRLGKLAKRFDTPAHF-DPALDFVSSCISTISCSAVSTPQMVIMDNIMAGNYPHLAGAITQIHAKYGVAGFYRGWLPGLMGKIPAYALTWTFFQRFKNLRARLIPDRPASNIENSIMGSTASALTVCIMIPVDTIKTRLVTQAGR-VGPAKYKGIIDCARTVLREEGLVSFYRGLPPRLVSVVPMIGIQFGVYEAMKR 399          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: GAX29412.1 (hypothetical protein FisN_16Hh148 [Fistulifera solaris])

HSP 1 Score: 270.4 bits (690), Expect = 1.200e-68
Identity = 148/276 (53.62%), Postives = 179/276 (64.86%), Query Frame = 0
Query:  209 KTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELSNL----NFQILTRGAGAQFALSLPHGALAFAVLEATKTTL----SSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWL-NHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVYEFMKR 476
            + L FW NM+ GA+SRS AQT MHPAN  KTLLQ+        L     F  L+ GAGA   LSLPHGA+ FAVLEA +  L      +       PA DFVSS +ST  CS +STPQMV+ D IMAG YP+L   ++ +  + GV G Y GW   L  KIP+Y LTW FFQ+ K  R R + +  A+N EN  MG+ A+A TVC+MIP+DT+KTR+VTQA   +    YKG++DC   VLREEGL +FY  L PRLVSVVPMIGIQFGVYE MKR
Sbjct:   98 RPLVFWENMVCGAISRSVAQTVMHPANTCKTLLQSSPDYRFRELLKPSMFHRLSIGAGANLLLSLPHGAINFAVLEAVRHRLGKLAKQFHTPAHFDPALDFVSSCISTISCSAVSTPQMVIMDNIMAGNYPHLAGAITQIHAKYGVAGFYRGWLPGLMGKIPAYALTWTFFQRFKNLRARLIPDRPASNIENSIMGSTASALTVCIMIPVDTIKTRLVTQAGR-VGPAKYKGIIDCARTVLREEGLVSFYRGLPPRLVSVVPMIGIQFGVYEAMKR 372          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: EJK75966.1 (hypothetical protein THAOC_02295 [Thalassiosira oceanica])

HSP 1 Score: 268.5 bits (685), Expect = 4.600e-68
Identity = 149/281 (53.02%), Postives = 187/281 (66.55%), Query Frame = 0
Query:  209 KTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTK----GSAELSNLNF------QILTRGAGAQFALSLPHGALAFAVLE---------ATKTTLSSWFPVGFAGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQFGVY 471
            + L FW  M+ GA+SRS AQT MHPANV+KT+LQ+K    G A L+  +F      Q L+RGAGAQ  LSLPHGA+ FAVLE          +K+  +      F G   DF+SSA+ST  CSV+STPQM++ D IMAG YPNL +  S ++K  GV G Y GW+  +A KIPSYGLTW  F+Q+K  R    +  A + EN  MG  A+A TVCVMIP+DTVKTR+VTQ+  P   V Y+G+ DCF R+++EEG+  FY  L PRL+SVVPMIGIQFGVY
Sbjct:   92 RKLAFWEAMVCGAISRSTAQTIMHPANVMKTILQSKRTIPGQAPLTVASFTQWRYAQKLSRGAGAQLLLSLPHGAVNFAVLEFVRRQMHGLVSKSPYAEQINRNF-GAGMDFLSSAISTVCCSVVSTPQMMICDNIMAGTYPNLASATSNLIKDRGVAGFYTGWWPGIAGKIPSYGLTWTLFEQIKRIRATISDRPAMDLENSIMGCIASATTVCVMIPMDTVKTRLVTQSKFPDL-VPYEGINDCFRRIMQEEGVGAFYRGLTPRLLSVVPMIGIQFGVY 370          
BLAST of NO12G03530 vs. NCBI_GenBank
Match: CBJ32170.1 (mitochondrial energy transfer protein [Ectocarpus siliculosus])

HSP 1 Score: 225.3 bits (573), Expect = 4.400e-55
Identity = 119/230 (51.74%), Postives = 155/230 (67.39%), Query Frame = 0
Query:  241 LQTKG-SAELSNLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGF---AGPAFDFVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLYAGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAAATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYAPLAPRLVSVVPMIGIQ 467
            +Q +G SA+LS+L+ ++L RGAGAQF +SLPHGA  +A LE      + +FP  +   AGP  DFV+S V+T LCSV+STPQ+V+ DRIM G YPNL++G   + + +G+RG Y GW A ++QKIPSYGLTWVF+Q  K    +  +   T  E+F +GA AA   VCVM+PLDTV TR+VTQ A P   V YKG      R++ EEGL   Y+ L  +LVSVVP IGIQ
Sbjct:    1 MQGRGTSAQLSSLSLKLLRRGAGAQFIMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGAVCVMLPLDTVLTRVVTQRAQP-GFVPYKGAFRTLGRIVNEEGLGAMYSSLPAKLVSVVPAIGIQ 229          
The following BLAST results are available for this feature:
BLAST of NO12G03530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM25692.13.500e-16987.54s-adenosylmethionine mitochondrial carrier protein... [more]
CBN76640.12.900e-8360.44Putative mitochondrial carrier protein PET8 [Ectoc... [more]
CBJ30331.13.600e-8161.01mitochondrial energy transfer protein [Ectocarpus ... [more]
CEM38396.13.600e-7354.14unnamed protein product [Vitrella brassicaformis C... [more]
OEU09974.13.100e-7254.01mitochondrial carrier [Fragilariopsis cylindrus CC... [more]
XP_002286310.12.900e-7055.35mitochondrial energy transfer protein, partial [Th... [more]
GAX26310.15.400e-6952.74hypothetical protein FisN_16Lh148 [Fistulifera sol... [more]
GAX29412.11.200e-6853.62hypothetical protein FisN_16Hh148 [Fistulifera sol... [more]
EJK75966.14.600e-6853.02hypothetical protein THAOC_02295 [Thalassiosira oc... [more]
CBJ32170.14.400e-5551.74mitochondrial energy transfer protein [Ectocarpus ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03530.1NO12G03530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|543251gene_5528Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100279g7gene4825Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03530.1NO12G03530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03530 ID=NO12G03530|Name=NO12G03530|organism=Nannochloropsis oceanica|type=gene|length=1611bp
ATGGCCGCTCCCACCGGTCACAGGCGACGGGTATCGTCGACCTGTTCCTC
AGGTATCTCGCCACCACTCCTCCTTTCCGCCCCAAGTCGCGGGCTTGTCC
TCCTCCTCCTTGTCCTCCTCCTAGTCGCCTCGTCATGGCCTGCATCGGCC
GCCTCGGCATTGACGGGCGTGTCACAAGTTTCACAAGTTCTGGGCAAGAG
CGCGTTGGGCCTAGCGCCGTGGAAGATATTTGATTGCAACAGGGCGAGCA
GCAGCAGTACCACTAGCAGCACCTCTAAGGCGGCGACGAAAGCCACAACA
TCGCCCGTGGTTGTGGCAACAGCAGCAACAGCAAGGGATTATAATTTATT
TTATTTTCCTGCATTTCAACATCAACGGGAGACGGAAGCCAAGATTTGCC
GAGTCGAACCGTCCTCGACAGCAGCTGCAGGAGCTATGAAGCTAACAACC
CCCACCCGCAGTAGCAGCACCACCACTCCGAGAAGAAGAGACTCCTCATT
CTCTTCCCTTCCTTCCCAAGGCCGCGCTACCACCGCCGCCGCAGCCATAC
CCCCTCCCTCCGCCTCCCCTCCTTCATTTCGCTTCCCCTTCTTCCGACCG
AGCCTTCCGGCCCTTCACGTCAACAAAACACTCACATTTTGGGGAAATAT
GCTTGCGGGCGCCGTGTCCCGCTCCTGCGCACAGACGGCAATGCACCCCG
CCAATGTTGTCAAGACCTTGCTGCAAACCAAGGGGTCAGCTGAGCTGAGT
AATTTGAATTTTCAAATTTTGACCCGGGGGGCCGGAGCCCAGTTCGCGCT
GTCGTTGCCTCATGGGGCTTTGGCTTTCGCAGTATTGGAGGCGACCAAGA
CAACTTTATCGAGCTGGTTTCCTGTGGGATTTGCCGGTCCGGCGTTTGAC
TTCGTCTCGTCGGCCGTGAGCACGACCTTGTGCTCGGTCATTAGCACGCC
ACAGATGGTGTTAACCGACAGGATTATGGCGGGGTATTACCCTAACCTCA
TCAACGGGGTGTCGACGGTGATGAAGAGGGACGGGGTGCGAGGCCTATAC
GCGGGGTGGTTCGCGGCCTTGGCGCAGAAAATCCCGAGCTATGGCTTAAC
TTGGGTGTTTTTCCAACAACTTAAATTGGCACGCACCCGGTGGTTGAATC
ATGAGGCGACCAATGCGGAGAATTTCGGGATGGGGGCATTCGCGGCAGCA
GCCACGGTGTGTGTTATGATTCCGCTGGACACGGTCAAGACAAGAATTGT
CACGCAGGCGGCGAACCCGATGGCGGGCGTGCACTACAAGGGTGTGTTGG
ATTGTTTTACACGGGTGCTGCGAGAGGAAGGCTTGAAGACGTTTTATGCC
CCCCTGGCCCCGCGCCTGGTCAGTGTGGTACCCATGATTGGTATCCAATT
TGGTGTCTACGAGTTTATGAAGCGGACCATTGCAGGCATGCCCGAGAAGC
CACTCAGGGAGGGCGGAAGGGAGGGAGGGATGGCGGCGGGGTGGGAGGGG
ATGAAGGCCTGGGCAAGAAGGAGGGTGCCAAGTTTGGCCCCGGGATCTGA
ATCCCCCTTGTCCGAGCCGCCTTTGAGTGAAATCTTTGATGAGATTGAGG
ATGCAAATTAG
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protein sequence of NO12G03530.1

>NO12G03530.1-protein ID=NO12G03530.1-protein|Name=NO12G03530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=537bp
MAAPTGHRRRVSSTCSSGISPPLLLSAPSRGLVLLLLVLLLVASSWPASA
ASALTGVSQVSQVLGKSALGLAPWKIFDCNRASSSSTTSSTSKAATKATT
SPVVVATAATARDYNLFYFPAFQHQRETEAKICRVEPSSTAAAGAMKLTT
PTRSSSTTTPRRRDSSFSSLPSQGRATTAAAAIPPPSASPPSFRFPFFRP
SLPALHVNKTLTFWGNMLAGAVSRSCAQTAMHPANVVKTLLQTKGSAELS
NLNFQILTRGAGAQFALSLPHGALAFAVLEATKTTLSSWFPVGFAGPAFD
FVSSAVSTTLCSVISTPQMVLTDRIMAGYYPNLINGVSTVMKRDGVRGLY
AGWFAALAQKIPSYGLTWVFFQQLKLARTRWLNHEATNAENFGMGAFAAA
ATVCVMIPLDTVKTRIVTQAANPMAGVHYKGVLDCFTRVLREEGLKTFYA
PLAPRLVSVVPMIGIQFGVYEFMKRTIAGMPEKPLREGGREGGMAAGWEG
MKAWARRRVPSLAPGSESPLSEPPLSEIFDEIEDAN*
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