NO12G03150, NO12G03150 (gene) Nannochloropsis oceanica

Overview
NameNO12G03150
Unique NameNO12G03150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2064
Alignment locationchr12:865852..867915 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:865852..867915 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO12G03150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL129nonsL129Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR010ngnoR010Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03150.1NO12G03150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592700gene_5489Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100154g8gene4796Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03150.1NO12G03150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03150 ID=NO12G03150|Name=NO12G03150|organism=Nannochloropsis oceanica|type=gene|length=2064bp
ATGGAAGCATCCTCTCCTCACCCCCAGCCTCTTTCCCCCTCCGTGCAACC
ATCATGGCGACTGGGGTCAGACACAGCAGCAGCGCGACCTCTCCCCCACC
CTCCTGCCTTCGATGTGGCACAGTCACTGGCTCTCACAGTCACCAGCAGT
AGCGGCACGAGCCAAGGCAAAAAGAGGAAACTTCCCTCCACCAAGGCAAG
TGCTTACCGCCCCGCTGCCACCACAACCAACGCGGATGCAGCAAGACCGC
ACATCCCCACATCAGCACCACAACTCAATCAAGACGCAGCAGGGGCCAAA
TCCAAGACACACAAAAGCTCTCGTAAAAGCAGAGGCGGTAGTGGTGGTGC
TGCTGATGGTAAACCCAGCGGGAGCAGCAGCCTTATAAGCAGCAGCAAGA
CGAAGAGTTCACACCACCTTGAGACAGCCAAGGCTAACATGGCAGGGACT
GAGACAGTGGTGCTCATATCGCGTACCACTACTCATTCTCCCCTTTCTTC
TTCCAGCGATGATGGAGTCGATCCCAACGCCGCCATGCCCGTGCCAGTGG
TAAACGACACACCTCCTCCTCCACCTCCTCCTCCACCTCCTGATTCTAGT
ATTCCCGTCGTTCAGCCTCCTGCAACAGGGAAAATCTGCAAGGCAAAGAA
GAAGAAAACGGCCATCACTACCAGTAAGAAATCAAGGCAAGCCATAGCAG
CTGCCACTGGTGTCCTGTCTCTTGCCCCCCCTCCACCTCCTTCCTCTCTT
CCACGACCTCCCCAGTCCAGTTCCTCAACTCCCTACCTAAACCCCCCCAA
AAACAATGCAGCAGTTGTGGCAGCAGCAACACCGATGATGAGCACCACAT
CGATGACAATAGCACGACAAGATGTAGTAGAAGGGATGGAAGAAGAAGAA
GAGGAAGGAAAAGAAATAGAAAAAGAAGGAGAAGGAATAGAAGATGACGA
CCACCATCACCAACGACAACAGCGGCAGCAGCGACAGCACCAACAATACC
AACAACAACCCACCCTAAAACAATATCACTTGCTCAGGCGACCAGACAAA
TCCTGGATAAGTCGTTCCTTCTCCTCCGCTACCGCCATCTCCCTCCCCCC
TCCTCTTCCTGCTCCCAAGACCCGCTACCTCTTGCACACCAAGGAAGCCT
ACGCAATATTTCTTCGCGAATTCCTACAAAACTGGGGAGGGAAGCCCATC
CTCCCTGCCTTCCTTCCCCCCCCTCATTCAGCCCCTACTTCTTCCTCGAA
GCTTATCCGGGCCGGCAAAATCAAAACCACCCTCCCCTCTCTCCTTCGGC
CCCTCACCCACCTCCAGCTCCTCCTACTCGCCCGGCACGAGTGGTCTACT
CTATCCCTCCGTCGTAAGCGCCGCTACTTCAAATCTCACATCACTGAAGC
CCGTGGTGGCATCTACCCCACCCACATTCGAAGCAAGGCCGAAGCTGCTG
CCTGCACTGCTGCTGCTGTTGCGCAAAGACAGCGAGAGGATGCCCGGCCA
GCAACAATGAAAGAAATGTTTCCTTTTTTTGGTGGTGTTGGTCGTGGTAG
TGGTGGCAGTGGCAGTGATTCTGCTGCTGACATACCTGCGGGAATTGGAG
GTGTGTGGCGAGGTCCACCCCCTACTAATTTGGTGGCGTTGGTGATGAGG
GAAGAGCGTTGTAATGTTGCGGAGGCAAGAGAGAGGGTGAGAAAGATGAC
GGAGAGAGAGAGGAGGAGAAGGAAGGAGGAGGTGAGGGAGGGAAAGGAGC
GCTATGAGAAGGAGGTGGAGGAGTATTGTGTTATGTGGCAGTTGCCGGTG
GTGGTGGGTGGGGAGGAAGGGAAGGGAATGGAGGAGGAGAGGGAGCGGGA
CGAAGAAGCAGCAGTTGAGGAAGAACAGAAAGAAGATGATGATGATGAAG
AAGGTAATGATGAGGATGAAGGTGATGGTGGTGATGATGATGATGACGGT
GAAAATGATGATAACGAAGAGAATGAGGGTGAGGAAGACGTGCCGTTGTC
GTGCTTGTTGAGTGCGGTGAAGGGAGGTAAAAAGAGAAGATGGACCATCA
CAGTAAGTAAATAA
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protein sequence of NO12G03150.1

>NO12G03150.1-protein ID=NO12G03150.1-protein|Name=NO12G03150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=688bp
MEASSPHPQPLSPSVQPSWRLGSDTAAARPLPHPPAFDVAQSLALTVTSS
SGTSQGKKRKLPSTKASAYRPAATTTNADAARPHIPTSAPQLNQDAAGAK
SKTHKSSRKSRGGSGGAADGKPSGSSSLISSSKTKSSHHLETAKANMAGT
ETVVLISRTTTHSPLSSSSDDGVDPNAAMPVPVVNDTPPPPPPPPPPDSS
IPVVQPPATGKICKAKKKKTAITTSKKSRQAIAAATGVLSLAPPPPPSSL
PRPPQSSSSTPYLNPPKNNAAVVAAATPMMSTTSMTIARQDVVEGMEEEE
EEGKEIEKEGEGIEDDDHHHQRQQRQQRQHQQYQQQPTLKQYHLLRRPDK
SWISRSFSSATAISLPPPLPAPKTRYLLHTKEAYAIFLREFLQNWGGKPI
LPAFLPPPHSAPTSSSKLIRAGKIKTTLPSLLRPLTHLQLLLLARHEWST
LSLRRKRRYFKSHITEARGGIYPTHIRSKAEAAACTAAAVAQRQREDARP
ATMKEMFPFFGGVGRGSGGSGSDSAADIPAGIGGVWRGPPPTNLVALVMR
EERCNVAEARERVRKMTERERRRRKEEVREGKERYEKEVEEYCVMWQLPV
VVGGEEGKGMEEERERDEEAAVEEEQKEDDDDEEGNDEDEGDGGDDDDDG
ENDDNEENEGEEDVPLSCLLSAVKGGKKRRWTITVSK*
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Synonyms
Publications