NO12G03080, NO12G03080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_019624168.1 (PREDICTED: LOW QUALITY PROTEIN: protein prenyltransferase alpha subunit repeat-containing protein 1-like [Branchiostoma belcheri]) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-15 Identity = 85/365 (23.29%), Postives = 133/365 (36.44%), Query Frame = 0 Query: 4 VLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEM-ATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAK-------------------------IAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNSLLELNFASLDTYPGHESLWYQRRGLLELWMATM 343 V+E +KLGI TW L+ IF A + R AR R + G+ + + ATRA+LL+ D TAWN+RK L+ L + +L F L+ +K+ K + +AHRRW + ++++ S + S V + + A+ AE P NY+AWTHR VV E V C H++ + +E+ R W RH+ D + + Y Q ++T + S L + EL + +PGHE+LWY RR + + W + + Sbjct: 42 VVENNKLGIETWCLELIFPYAHDKVLR-------ARGRDDNGRKIKVSRSARSLLEATRAVLLVQADCLTAWNIRKELVEAEDLKCIQDLKFAALVLTKHPKSSETFAHRRWLLKQIVQKTTSTSLQPSPVSQASHTNGLVAGDQASGGAAAVPPLNARGTKSGGAELPCDEKLLETELAVCQSSAERYPSNYYAWTHRAWVV--EQVARC--HYK--------------------ILIKELSDTRHWISRHISDHSGLQYRQFLITQLATHFRSADALQDEFLPL-------------------------------------------LTAEFELLTDLITAFPGHEALWYHRRYVFQQWESVL 332
BLAST of NO12G03080 vs. NCBI_GenBank
Match: OQR82081.1 (Drug/Metabolite Transporter (DMT) Superfamily [Thraustotheca clavata]) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-15 Identity = 57/178 (32.02%), Postives = 89/178 (50.00%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRV 180 AFVLE HKLGIA L + K+ +A T D ++ A+RA+LL+ D YTAWN RK+L+V G+L ++E F++L+ S ++K WAHRRW + R + L+K++ + K + ++ E P+NYHAW++R+R+ Sbjct: 273 AFVLEDHKLGIALDVLPTLHKQ-----------GKEAFFASRTENDTQR-----IIQASRAILLVCADYYTAWNARKKLLVQGHLDMLEEFKFMNLVLSHHSKSIDTWAHRRWMLDRFIP-LSKDAEFLQK----------------------ELALCLRLTELYPRNYHAWSYRYRI 411
BLAST of NO12G03080 vs. NCBI_GenBank
Match: GBC12800.1 (ubiquitin carboxyl-terminal hydrolase [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 93.6 bits (231), Expect = 1.900e-15 Identity = 64/243 (26.34%), Postives = 112/243 (46.09%), Query Frame = 0 Query: 3 FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244 F+L LGI + I+K A + + RG+ G+ E + + + +TR +++IN D Y+A N RK+LI+ ++ EL FIDL+F+ K+TK ++ W HR+W + R+ +H + N +T ++AE PKNY+AWT+R HW + L I+T + K + + E++ ++ W ++ D + +LQ+ L Sbjct: 411 FLLIESNLGIPLKYVDKIYKYAHGIFMNV---------RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 601
BLAST of NO12G03080 vs. NCBI_GenBank
Match: GBC12803.1 (protein prenyltransferase, putative [Rhizophagus irregularis DAOM 181602]) HSP 1 Score: 93.6 bits (231), Expect = 1.900e-15 Identity = 64/243 (26.34%), Postives = 112/243 (46.09%), Query Frame = 0 Query: 3 FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244 F+L LGI + I+K A + + RG+ G+ E + + + +TR +++IN D Y+A N RK+LI+ ++ EL FIDL+F+ K+TK ++ W HR+W + R+ +H + N +T ++AE PKNY+AWT+R HW + L I+T + K + + E++ ++ W ++ D + +LQ+ L Sbjct: 39 FLLIESNLGIPLKYVDKIYKYAHGIFMNV---------RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 229
BLAST of NO12G03080 vs. NCBI_GenBank
Match: ORY50798.1 (protein prenylyltransferase [Rhizoclosmatium globosum]) HSP 1 Score: 93.2 bits (230), Expect = 2.500e-15 Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 0 Query: 52 DMMVDEM--ATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVR 182 D +DE+ ++ LLL+NP+ YTAWN+RK+L+ L+A +E+A IDL+ SK+ K+ +AW+HR W LL L + S + K+ + + A+ NYHAWTHRW+VVR Sbjct: 83 DSDLDELDASSTCLLLMNPEIYTAWNIRKKLLALQRLNATEEMALIDLVLSKHPKRPAAWSHRAW----LLPRLRETSTNIDKL------------------LTHELKICDQAAQRHRMNYHAWTHRWKVVR 192
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_001621597.1 (hypothetical protein NEMVEDRAFT_v1g248661 [Nematostella vectensis] >EDO29497.1 predicted protein [Nematostella vectensis]) HSP 1 Score: 92.8 bits (229), Expect = 3.200e-15 Identity = 82/348 (23.56%), Postives = 134/348 (38.51%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHR-WRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLT---HAISVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNSLLELNFASLDTYPGHESLWYQRRGLLE---LWMATM 343 A V+ HKLGI +W ++P++ A H + R K R G Q E + +RA++L++ + Y+AWN+RK L+ G LS +L L+ +K+ + A A+AHR+W ++ + K++ + E+ V+ + AE P NY AW+HR W R D +K L +++ ++ W H+ D +Y Q ++T +SV + LEL + L++ PGHES+WY RR L + LW +TM Sbjct: 55 AMVVIGHKLGIRSWCIRPMYMYAYHRLLR------KHRHCGVKNQSTENLTATELDQLSRAVVLLSAECYSAWNIRKELVSSGLLSVDCDLHISTLVLTKHPRSAEAFAHRKWLINYFTKQKGKSTFCQEWLREE-------------------IIVSQQAAERYPDNYVAWSHRGWVADRFID--------SKKKLLCELQGMEQ------------------WVQMHISDHCGFHYRQALITKLKQLVSVCDLAFLFL---------------------------------------------------AELELVNSLLESLPGHESVWYHRRFLFQHWRLWFSTM 300
BLAST of NO12G03080 vs. NCBI_GenBank
Match: EXX78076.1 (Bet4p [Rhizophagus irregularis DAOM 197198w] >PKY47319.1 protein prenylyltransferase [Rhizophagus irregularis] >POG79302.1 hypothetical protein GLOIN_2v1529546 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 92.4 bits (228), Expect = 4.200e-15 Identity = 56/205 (27.32%), Postives = 99/205 (48.29%), Query Frame = 0 Query: 41 RGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244 RG+ G+ E + + + +TR +++IN D Y+A N RK+LI+ ++ EL FIDL+F+ K+TK ++ W HR+W + R+ +H + N +T ++AE PKNY+AWT+R HW + L I+T + K + + E++ ++ W ++ D + +LQ+ L Sbjct: 4 RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 165
BLAST of NO12G03080 vs. NCBI_GenBank
Match: PKK78556.1 (protein prenylyltransferase [Rhizophagus irregularis]) HSP 1 Score: 92.4 bits (228), Expect = 4.200e-15 Identity = 56/205 (27.32%), Postives = 99/205 (48.29%), Query Frame = 0 Query: 41 RGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244 RG+ G+ E + + + +TR +++IN D Y+A N RK+LI+ ++ EL FIDL+F+ K+TK ++ W HR+W + R+ +H + N +T ++AE PKNY+AWT+R HW + L I+T + K + + E++ ++ W ++ D + +LQ+ L Sbjct: 4 RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 165
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_022780433.1 (protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X1 [Stylophora pistillata] >PFX31763.1 Protein prenyltransferase alpha subunit repeat-containing protein 1 [Stylophora pistillata]) HSP 1 Score: 91.7 bits (226), Expect = 7.200e-15 Identity = 82/336 (24.40%), Postives = 125/336 (37.20%), Query Frame = 0 Query: 4 VLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHR-WRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNSLLELNFASLDTYPGHESLWYQRRGLLELW 339 VL HKLGI + L+P+F A + + RER + D + +RA+LL+N + YT WN+RK LI G LS D++ F L+ SK+ + A +AHRRW + +L +H +N ++ + AE+ NY AW+HR W V R D +K+ E++ +R WT RH+ D ++ Q +L + +V + L S LE + T+PGHE +WY RR + W Sbjct: 51 VLVNHKLGIKSSCLRPLFLFAYEKL------LGRRRER----KRDYSLSVTETVQLSRAVLLVNAECYTVWNIRKELISAGILSLEDDIKFSALVLSKHPRSAETFAHRRWTIGQLEKHKGQNE-------------------FVHCCLRSELAISLRAAESYADNYTAWSHRSWLVER--------------------FMKDMKKRLFC-----ELQVMRKWTERHISDNCGFHHKQVLLKYLKNVCSNSEVIHL------------------------------------------------LLSELEFTSDLILTFPGHEVVWYHRRFVYYFW 284
BLAST of NO12G03080 vs. NCBI_GenBank
Match: POM66529.1 (Rab-protein geranylgeranyltransferase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 90.9 bits (224), Expect = 1.200e-14 Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 0 Query: 2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKV 131 AF LE HKLG+A A P+F+ A + + + +D+E+ ++ TRA+LLIN D YTAWN RK + G+L A DE+ F +L+F+ + K WA+RRW + L L++N +V Sbjct: 43 AFFLEDHKLGVAFAAGIPLFQAARTQFHLLNALLLQEEDEITLSEDNERRAQLLH--CTRAILLINADFYTAWNTRKSFVTRGWLDAQDEVRFTNLVFTLHPKSIDTWAYRRWLAAGLCISLSENELQV 169 The following BLAST results are available for this feature:
BLAST of NO12G03080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G03080 ID=NO12G03080|Name=NO12G03080|organism=Nannochloropsis oceanica|type=gene|length=2047bpback to top protein sequence of NO12G03080.2 >NO12G03080.2-protein ID=NO12G03080.2-protein|Name=NO12G03080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=508bpback to top protein sequence of NO12G03080.1 >NO12G03080.1-protein ID=NO12G03080.1-protein|Name=NO12G03080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=556bpback to top Synonyms
Publications
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