NO12G03080, NO12G03080 (gene) Nannochloropsis oceanica

Overview
NameNO12G03080
Unique NameNO12G03080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2047
Alignment locationchr12:847245..849291 -

Link to JBrowse

Properties
Property NameValue
DescriptionProtein prenyltransferase alpha subunit repeat containing 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:847245..849291 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0018342protein prenylation
GO:0018342protein prenylation
Vocabulary: Molecular Function
TermDefinition
GO:0008318protein prenyltransferase activity
GO:0016740transferase activity
GO:0008318protein prenyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR002088Prenyl_trans_a
Homology
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_019624168.1 (PREDICTED: LOW QUALITY PROTEIN: protein prenyltransferase alpha subunit repeat-containing protein 1-like [Branchiostoma belcheri])

HSP 1 Score: 94.4 bits (233), Expect = 1.100e-15
Identity = 85/365 (23.29%), Postives = 133/365 (36.44%), Query Frame = 0
Query:    4 VLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEM-ATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAK-------------------------IAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNSLLELNFASLDTYPGHESLWYQRRGLLELWMATM 343
            V+E +KLGI TW L+ IF  A   + R       AR R + G+  +        + ATRA+LL+  D  TAWN+RK L+    L  + +L F  L+ +K+ K +  +AHRRW + ++++     S + S V +                      + A+                          AE  P NY+AWTHR  VV  E V  C  H++                    +  +E+   R W  RH+ D + + Y Q ++T   +   S                                                      L +  EL    +  +PGHE+LWY RR + + W + +
Sbjct:   42 VVENNKLGIETWCLELIFPYAHDKVLR-------ARGRDDNGRKIKVSRSARSLLEATRAVLLVQADCLTAWNIRKELVEAEDLKCIQDLKFAALVLTKHPKSSETFAHRRWLLKQIVQKTTSTSLQPSPVSQASHTNGLVAGDQASGGAAAVPPLNARGTKSGGAELPCDEKLLETELAVCQSSAERYPSNYYAWTHRAWVV--EQVARC--HYK--------------------ILIKELSDTRHWISRHISDHSGLQYRQFLITQLATHFRSADALQDEFLPL-------------------------------------------LTAEFELLTDLITAFPGHEALWYHRRYVFQQWESVL 332          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: OQR82081.1 (Drug/Metabolite Transporter (DMT) Superfamily [Thraustotheca clavata])

HSP 1 Score: 94.4 bits (233), Expect = 1.100e-15
Identity = 57/178 (32.02%), Postives = 89/178 (50.00%), Query Frame = 0
Query:    2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRV 180
            AFVLE HKLGIA   L  + K+             +A     T  D ++        A+RA+LL+  D YTAWN RK+L+V G+L  ++E  F++L+ S ++K    WAHRRW + R +  L+K++  + K                         +  ++ E  P+NYHAW++R+R+
Sbjct:  273 AFVLEDHKLGIALDVLPTLHKQ-----------GKEAFFASRTENDTQR-----IIQASRAILLVCADYYTAWNARKKLLVQGHLDMLEEFKFMNLVLSHHSKSIDTWAHRRWMLDRFIP-LSKDAEFLQK----------------------ELALCLRLTELYPRNYHAWSYRYRI 411          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: GBC12800.1 (ubiquitin carboxyl-terminal hydrolase [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 93.6 bits (231), Expect = 1.900e-15
Identity = 64/243 (26.34%), Postives = 112/243 (46.09%), Query Frame = 0
Query:    3 FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244
            F+L    LGI    +  I+K A  +   +         RG+ G+    E + + + +TR +++IN D Y+A N RK+LI+  ++    EL FIDL+F+  K+TK ++ W HR+W + R+ +H + N                               +T ++AE  PKNY+AWT+R              HW    + L I+T   + K   + +  E++ ++ W   ++ D +   +LQ+ L
Sbjct:  411 FLLIESNLGIPLKYVDKIYKYAHGIFMNV---------RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 601          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: GBC12803.1 (protein prenyltransferase, putative [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 93.6 bits (231), Expect = 1.900e-15
Identity = 64/243 (26.34%), Postives = 112/243 (46.09%), Query Frame = 0
Query:    3 FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244
            F+L    LGI    +  I+K A  +   +         RG+ G+    E + + + +TR +++IN D Y+A N RK+LI+  ++    EL FIDL+F+  K+TK ++ W HR+W + R+ +H + N                               +T ++AE  PKNY+AWT+R              HW    + L I+T   + K   + +  E++ ++ W   ++ D +   +LQ+ L
Sbjct:   39 FLLIESNLGIPLKYVDKIYKYAHGIFMNV---------RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 229          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: ORY50798.1 (protein prenylyltransferase [Rhizoclosmatium globosum])

HSP 1 Score: 93.2 bits (230), Expect = 2.500e-15
Identity = 49/132 (37.12%), Postives = 73/132 (55.30%), Query Frame = 0
Query:   52 DMMVDEM--ATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVR 182
            D  +DE+  ++  LLL+NP+ YTAWN+RK+L+    L+A +E+A IDL+ SK+ K+ +AW+HR W    LL  L + S  + K+                        +  + A+    NYHAWTHRW+VVR
Sbjct:   83 DSDLDELDASSTCLLLMNPEIYTAWNIRKKLLALQRLNATEEMALIDLVLSKHPKRPAAWSHRAW----LLPRLRETSTNIDKL------------------LTHELKICDQAAQRHRMNYHAWTHRWKVVR 192          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_001621597.1 (hypothetical protein NEMVEDRAFT_v1g248661 [Nematostella vectensis] >EDO29497.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 92.8 bits (229), Expect = 3.200e-15
Identity = 82/348 (23.56%), Postives = 134/348 (38.51%), Query Frame = 0
Query:    2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHR-WRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLT---HAISVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNSLLELNFASLDTYPGHESLWYQRRGLLE---LWMATM 343
            A V+  HKLGI +W ++P++  A H + R      K R  G   Q  E       +  +RA++L++ + Y+AWN+RK L+  G LS   +L    L+ +K+ + A A+AHR+W ++   +   K++     + E+                     V+ + AE  P NY AW+HR W   R  D         +K L  +++  ++                  W   H+ D    +Y Q ++T     +SV                                                           + LEL  + L++ PGHES+WY RR L +   LW +TM
Sbjct:   55 AMVVIGHKLGIRSWCIRPMYMYAYHRLLR------KHRHCGVKNQSTENLTATELDQLSRAVVLLSAECYSAWNIRKELVSSGLLSVDCDLHISTLVLTKHPRSAEAFAHRKWLINYFTKQKGKSTFCQEWLREE-------------------IIVSQQAAERYPDNYVAWSHRGWVADRFID--------SKKKLLCELQGMEQ------------------WVQMHISDHCGFHYRQALITKLKQLVSVCDLAFLFL---------------------------------------------------AELELVNSLLESLPGHESVWYHRRFLFQHWRLWFSTM 300          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: EXX78076.1 (Bet4p [Rhizophagus irregularis DAOM 197198w] >PKY47319.1 protein prenylyltransferase [Rhizophagus irregularis] >POG79302.1 hypothetical protein GLOIN_2v1529546 [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 92.4 bits (228), Expect = 4.200e-15
Identity = 56/205 (27.32%), Postives = 99/205 (48.29%), Query Frame = 0
Query:   41 RGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244
            RG+ G+    E + + + +TR +++IN D Y+A N RK+LI+  ++    EL FIDL+F+  K+TK ++ W HR+W + R+ +H + N                               +T ++AE  PKNY+AWT+R              HW    + L I+T   + K   + +  E++ ++ W   ++ D +   +LQ+ L
Sbjct:    4 RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 165          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: PKK78556.1 (protein prenylyltransferase [Rhizophagus irregularis])

HSP 1 Score: 92.4 bits (228), Expect = 4.200e-15
Identity = 56/205 (27.32%), Postives = 99/205 (48.29%), Query Frame = 0
Query:   41 RGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS--KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVL 244
            RG+ G+    E + + + +TR +++IN D Y+A N RK+LI+  ++    EL FIDL+F+  K+TK ++ W HR+W + R+ +H + N                               +T ++AE  PKNY+AWT+R              HW    + L I+T   + K   + +  E++ ++ W   ++ D +   +LQ+ L
Sbjct:    4 RGD-GKVKPSETVKLLKDSTRCMVIINADCYSALNTRKKLIIDNHIDPTRELKFIDLLFTFPKHTKHSTIWFHRKWIILRIQQHFSSND---------------------ISQWQYEINITRRVAELYPKNYYAWTYR--------------HW----ILLNIKTDSVQSK---SFFVDELKIMKIWVQTNISDYSGFQHLQRCL 165          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: XP_022780433.1 (protein prenyltransferase alpha subunit repeat-containing protein 1-like isoform X1 [Stylophora pistillata] >PFX31763.1 Protein prenyltransferase alpha subunit repeat-containing protein 1 [Stylophora pistillata])

HSP 1 Score: 91.7 bits (226), Expect = 7.200e-15
Identity = 82/336 (24.40%), Postives = 125/336 (37.20%), Query Frame = 0
Query:    4 VLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHXXXXXXXXXXXXXXXXXXVTAKIAEALPKNYHAWTHR-WRVVRGEDVGICDVHWEEKGLTLKIETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLNSLLELNFASLDTYPGHESLWYQRRGLLELW 339
            VL  HKLGI +  L+P+F  A   +        + RER    + D    +      +RA+LL+N + YT WN+RK LI  G LS  D++ F  L+ SK+ + A  +AHRRW + +L +H  +N                               ++ + AE+   NY AW+HR W V R                       D +K+        E++ +R WT RH+ D    ++ Q +L +  +V  +                                                      L S LE     + T+PGHE +WY RR +   W
Sbjct:   51 VLVNHKLGIKSSCLRPLFLFAYEKL------LGRRRER----KRDYSLSVTETVQLSRAVLLVNAECYTVWNIRKELISAGILSLEDDIKFSALVLSKHPRSAETFAHRRWTIGQLEKHKGQNE-------------------FVHCCLRSELAISLRAAESYADNYTAWSHRSWLVER--------------------FMKDMKKRLFC-----ELQVMRKWTERHISDNCGFHHKQVLLKYLKNVCSNSEVIHL------------------------------------------------LLSELEFTSDLILTFPGHEVVWYHRRFVYYFW 284          
BLAST of NO12G03080 vs. NCBI_GenBank
Match: POM66529.1 (Rab-protein geranylgeranyltransferase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 90.9 bits (224), Expect = 1.200e-14
Identity = 48/129 (37.21%), Postives = 72/129 (55.81%), Query Frame = 0
Query:    2 AFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKEDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKYTKKASAWAHRRWCVSRLLEHLAKNSRKV 131
            AF LE HKLG+A  A  P+F+ A      +     +  +     +D+E+   ++    TRA+LLIN D YTAWN RK  +  G+L A DE+ F +L+F+ + K    WA+RRW  + L   L++N  +V
Sbjct:   43 AFFLEDHKLGVAFAAGIPLFQAARTQFHLLNALLLQEEDEITLSEDNERRAQLLH--CTRAILLINADFYTAWNTRKSFVTRGWLDAQDEVRFTNLVFTLHPKSIDTWAYRRWLAAGLCISLSENELQV 169          
The following BLAST results are available for this feature:
BLAST of NO12G03080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_019624168.11.100e-1523.29PREDICTED: LOW QUALITY PROTEIN: protein prenyltran... [more]
OQR82081.11.100e-1532.02Drug/Metabolite Transporter (DMT) Superfamily [Thr... [more]
GBC12800.11.900e-1526.34ubiquitin carboxyl-terminal hydrolase [Rhizophagus... [more]
GBC12803.11.900e-1526.34protein prenyltransferase, putative [Rhizophagus i... [more]
ORY50798.12.500e-1537.12protein prenylyltransferase [Rhizoclosmatium globo... [more]
XP_001621597.13.200e-1523.56hypothetical protein NEMVEDRAFT_v1g248661 [Nematos... [more]
EXX78076.14.200e-1527.32Bet4p [Rhizophagus irregularis DAOM 197198w] >PKY4... [more]
PKK78556.14.200e-1527.32protein prenylyltransferase [Rhizophagus irregular... [more]
XP_022780433.17.200e-1524.40protein prenyltransferase alpha subunit repeat-con... [more]
POM66529.11.200e-1437.21Rab-protein geranylgeranyltransferase [Phytophthor... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL125nonsL125Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR015ncniR015Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR007ngnoR007Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010258NSK010258Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G03080.2NO12G03080.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G03080.1NO12G03080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631092gene_5482Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100087g8gene4783Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G03080.2NO12G03080.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G03080.1NO12G03080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G03080 ID=NO12G03080|Name=NO12G03080|organism=Nannochloropsis oceanica|type=gene|length=2047bp
CCTTACGCCCACTTGTGCTTTTACCCTTCAGAGACACAGTACGCGCAGCA
TGGCGTCCTTGTCTTCCTCGTCGTCATCGTTGGTCCATCAGCTCGCGGCT
TGTTTTGCGAAAGACCCGCTCATgtaagtttttgctcatctgctgcgggg
gacattacgcctagtgttgatcagcttcttatgatgcctaacttacccgt
tcgcattatgctccgcacgcagCGACGAGTACGATTTTGTCTTGCTTCCT
TCACCATCCGATTTAGCGAAGGGCGCACCGATAAAAGATACTATGGCTTT
TGTGTTGGAGGCACACAAGCTTGGGATTGCCACTTGGGCACTGAAACCGA
TATTCAAAGAAGCTTTACATATGATCCGCCGCATCACCACCGCCTCTTCA
AAGGCGAGGGAGCGGGGGGAAACCGGACAAGACGACGAGAAAGAGGACAT
GATGGTAGATGAGATGGCAACGCGGGCTTTATTGCTGATAAATCCTGACA
CGTATACAGCGTGGAATGTGCGAAAACGACTGATTGTGGGGGGCTACCTT
AGgtaaggagtggaggatgcgtggacgaggcgcatgcagctttttaaaat
aatgggagataatttattttgtttccccctggcctgtcatacggtacaca
tacccctttacgtttgtcatcacccctgcatacaatcagTGCGGTCGATG
AGCTGGCCTTCATTGACCTGATCTTCAGCAAATACACTAAGAAAGCCTCT
GCCTGGGCCCATCGACGATGGTGTGTGTCGCGGCTCTTGGAGCATTTGGC
AAAAAACAGCAGGAAAGTCAGCAAGGTTGGGGAGAAGGATCAGCATCACC
AGCAGCAGCAGCAGTGGTGTTGGAGCCAGCAGCGAGAGAAGGAACTGGAA
GTAACGGCAAAGATTGCCGAGGCGCTTCCCAAGAATTACCATGCCTGGAC
GCACCGTTGGAGGGTGGTTAGAGGCGAGGACGTAGGGATATGTGATGTCC
ACTGGGAAGAAAAGGGGTTAACGTTGAAAATAGAAACGTCAGACGAGGAG
AAGAAAGAGGAGGCAGCGTTATGGCAGCAGGAAGTGGAATTTGTGCGGGG
ATGGACTGGGCGTCATGTGGGGGATATGGCCGCAATGAATTACTTGCAGC
AGGTTTTGACTCATGCCATTTCGGTCTCTCCTTCTCCTCCCTCTTCCTCT
TCCTCCTCTTCCTCCTCCTGCTCCTGCTGCTCCTCCTGCATCTCCTGCTC
CTCCTCCTCTATCCCTGCTGTTGCATTCACTCCCCTTTCGAAAAGCGAGA
GGGAGCAAAACCAGTCATTGGCGAGACTTCGTTCCATCACTTCTTCCCTA
AATTCGCTGCTGGAGTTGAACTTTGCATCCCTCGACACTTATCCAGGTCA
CGAAAGCCTGTGGTACCAACGACGGGGCCTGCTGGAACTATGGATGGCGA
CAATGAGGCGACGAGAAGTAGCAGGATCCCTCTCGTCTTCTCCTTTTTCT
TCCTCCTCCTCCTCCTCCACTTCAGCTATTGCCACCGCTGCCGCCGTTCC
CCCCTCCTACCATGCTCAGATTACTCTCTACAATGCTGAGATGGACCGCG
GTAGTCACTACATGCAGGGGGAGAGACCGTGGGAGGGAGGAGAGGGAGGG
AGGGAGGGAGGGCTGTTGTGGGATGCAGCAGCGAAACGGAAGCAGAAGCT
TAGTGCGTGGGCACATAGGTGCTGGATGGTACTTCGTTGGAGGAAAGGAG
AAGGGTGGGAGGGGAAAGGGGCAAAGGAGAATGAGAGGGCAGCATTATGG
GAGGAGTTGATGGCATTGGAGGCGAGTGACTCTCTTTTGTTTGTCCCTCC
AGGTTACAAGTGCCTGCTTTTGTCAAGAGGCATGTGCGAACGGGACGGGG
GGCGGGATGAGAGGGGTACTGAGGTGCGGAGAGGAAGAGGAAATAGGTGT
TAAAAAGATGTAAATGAGAAATTGAAATCACCTGCAGTAGAAATGTGAGA
ATACTGCATTACTGAAAGCAAAAATTTAAGGCGACCTCCACGACACG
back to top

protein sequence of NO12G03080.2

>NO12G03080.2-protein ID=NO12G03080.2-protein|Name=NO12G03080.2|organism=Nannochloropsis oceanica|type=polypeptide|length=508bp
MAFVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEK
EDMMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFS
KYTKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHHQQQQQWCWSQ
QREKELEVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLK
IETSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVS
PSPPSSSSSSSSSCSCCSSCISCSSSSIPAVAFTPLSKSEREQNQSLARL
RSITSSLNSLLELNFASLDTYPGHESLWYQRRGLLELWMATMRRREVAGS
LSSSPFSSSSSSSTSAIATAAAVPPSYHAQITLYNAEMDRGSHYMQGERP
WEGGEGGREGGLLWDAAAKRKQKLSAWAHRCWMVLRWRKGEGWEGKGAKE
NERAALWEELMALEASDSLLFVPPGYKCLLLSRGMCERDGGRDERGTEVR
RGRGNRC*
back to top

protein sequence of NO12G03080.1

>NO12G03080.1-protein ID=NO12G03080.1-protein|Name=NO12G03080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=556bp
MASLSSSSSSLVHQLAACFAKDPLIDEYDFVLLPSPSDLAKGAPIKDTMA
FVLEAHKLGIATWALKPIFKEALHMIRRITTASSKARERGETGQDDEKED
MMVDEMATRALLLINPDTYTAWNVRKRLIVGGYLSAVDELAFIDLIFSKY
TKKASAWAHRRWCVSRLLEHLAKNSRKVSKVGEKDQHHQQQQQWCWSQQR
EKELEVTAKIAEALPKNYHAWTHRWRVVRGEDVGICDVHWEEKGLTLKIE
TSDEEKKEEAALWQQEVEFVRGWTGRHVGDMAAMNYLQQVLTHAISVSPS
PPSSSSSSSSSCSCCSSCISCSSSSIPAVAFTPLSKSEREQNQSLARLRS
ITSSLNSLLELNFASLDTYPGHESLWYQRRGLLELWMATMRRREVAGSLS
SSPFSSSSSSSTSAIATAAAVPPSYHAQITLYNAEMDRGSHYMQGERPWE
GGEGGREGGLLWDAAAKRKQKLSAWAHRCWMVLRWRKGEGWEGKGAKENE
RAALWEELMALEASDSLLFVPPGYKCLLLSRGMCERDGGRDERGTEVRRG
RGNRC*
back to top
Synonyms
Publications