NO12G02800, NO12G02800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO12G02800 vs. NCBI_GenBank
Match: XP_014156623.1 (hypothetical protein SARC_04992, partial [Sphaeroforma arctica JP610] >KNC82721.1 hypothetical protein SARC_04992, partial [Sphaeroforma arctica JP610]) HSP 1 Score: 197.6 bits (501), Expect = 4.500e-47 Identity = 101/207 (48.79%), Postives = 134/207 (64.73%), Query Frame = 0 Query: 8 IMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEA-AHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 +MK+R L PLA+WN L+++S GA R VPHLL I F+ ++CT G ATG+ T F SK ELVDT++I L+ K IFLHWYHH++VL F W A+ + AG+YFI MNY+VH+VMY YY+ MA+K PK+LNPI IT Q++QM VG+ ++ GFYY CAV + +YASY YLF+EF++KR Sbjct: 41 LMKDREAFGLRMPLAYWNLCLSLFSAYGAFRTVPHLLNNIYQVGFEASMCTPAPESYGLSATGMATTFFVFSKFPELVDTVWIVLRKKPLIFLHWYHHITVLLFCWHAYATRSSAGLYFISMNYSVHAVMYFYYYAMAVKIWPKFLNPIMITMFQLSQMAVGIFVSIMGFYYRYNGTPCAVSDDNMAWGAAMYASYFYLFLEFLVKR 247
BLAST of NO12G02800 vs. NCBI_GenBank
Match: GAX19603.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 191.8 bits (486), Expect = 2.400e-45 Identity = 94/194 (48.45%), Postives = 127/194 (65.46%), Query Frame = 0 Query: 21 LAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 LA WN FL+V+S +G +R PHL ++ +F++ +C P G G+TGLWV LF LSK EL+DT FI + K IFLHWYHH++VL + W ++ + G+ F MNYTVH+ MY YYFLMA++ KPKW NP+ IT MQI+QM+VGV T +YY DA CA+D + ++Y SYL+LF +F R Sbjct: 83 LAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSR 276
BLAST of NO12G02800 vs. NCBI_GenBank
Match: GAX09713.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 191.8 bits (486), Expect = 2.400e-45 Identity = 94/194 (48.45%), Postives = 127/194 (65.46%), Query Frame = 0 Query: 21 LAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 LA WN FL+V+S +G +R PHL ++ +F++ +C P G G+TGLWV LF LSK EL+DT FI + K IFLHWYHH++VL + W ++ + G+ F MNYTVH+ MY YYFLMA++ KPKW NP+ IT MQI+QM+VGV T +YY DA CA+D + ++Y SYL+LF +F R Sbjct: 75 LAVWNLFLSVFSFVGMLRTAPHLFHNLTHLSFRDNMCLDPRTTYGSGSTGLWVQLFILSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPTGIIFTAMNYTVHATMYGYYFLMALRMKPKWFNPMVITAMQISQMVVGVATTIVSYYYFLTDAECALDRGNNIAAFLMYGSYLFLFCQFFFSR 268
BLAST of NO12G02800 vs. NCBI_GenBank
Match: GAX19602.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 186.4 bits (472), Expect = 1.000e-43 Identity = 95/197 (48.22%), Postives = 130/197 (65.99%), Query Frame = 0 Query: 20 PLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFY--YSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 PLA WNF L+++STIG +RV P +L+ I ++T +E C P G GATG W +F LSK+ EL DT FI + K +FLHWYHH+SVL FTW A+ + G +FI MNY VH++MY YYFLMA++ KPKW NPI+IT QI+QM VGV +T + Y + + C + + + + V+Y SYL+LF +F +R Sbjct: 94 PLALWNFGLSLFSTIGFLRVAPFVLFNIYSYTLRENCCFDPESHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHVEEREDCLMRKDINQSALVMYGSYLFLFCKFFFER 290
BLAST of NO12G02800 vs. NCBI_GenBank
Match: GAX09712.1 (elongation of very long chain fatty acids protein 6 [Fistulifera solaris]) HSP 1 Score: 186.0 bits (471), Expect = 1.300e-43 Identity = 95/197 (48.22%), Postives = 130/197 (65.99%), Query Frame = 0 Query: 20 PLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFY--YSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 PLA WNF L+++STIG IRV P +L+ I ++T +E C P G GATG W +F LSK+ EL DT FI + K +FLHWYHH+SVL FTW A+ + G +FI MNY VH++MY YYFLMA++ KPKW NPI+IT QI+QM VGV +T + Y + + C + + + + ++Y SYL+LF +F +R Sbjct: 159 PLALWNFGLSLFSTIGFIRVAPFVLFNIYSYTLRENCCFDPESHVGSGATGFWSQMFVLSKIPELFDTFFIVIHKKPLMFLHWYHHISVLLFTWHAYVNNSPTGAFFISMNYGVHAMMYFYYFLMAVRMKPKWFNPIWITVAQISQMFVGVFLTVYTTYILHFEEREDCLMRKDINQSALLMYGSYLFLFCKFFFER 355
BLAST of NO12G02800 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.]) HSP 1 Score: 184.9 bits (468), Expect = 3.000e-43 Identity = 90/219 (41.10%), Postives = 137/219 (62.56%), Query Frame = 0 Query: 6 PRIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFIST---HTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDAT--------CAVDPFVLKISGVIYASYLYLFMEFMIKR 214 P+ M++R DL L WN L++ S GA+RV HLL+ +S +F++T+C +P D ATGLW +FT+SK++ELVDT+F+ L+ K IFLHWYHH +VL +W H +YF+ +NY++H VMY Y+FLMAIK P+W NP+++T QI+QM VG+ + YY + CA+D ++ ++Y++YL LF++F ++R Sbjct: 85 PKAMRHRKAFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPEATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQR 303
BLAST of NO12G02800 vs. NCBI_GenBank
Match: XP_008880479.1 (hypothetical protein H310_14402 [Aphanomyces invadans] >ETV90914.1 hypothetical protein H310_14402 [Aphanomyces invadans]) HSP 1 Score: 183.3 bits (464), Expect = 8.700e-43 Identity = 97/207 (46.86%), Postives = 133/207 (64.25%), Query Frame = 0 Query: 8 IMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 +MKN L+ LA WNF LA++S IG+IR VP LL + T VC+ + G G GLWVTLF SK+ EL+DT+FI L+ K IFLHWYHH++VL F W A+ + G++F+ MNYTVH+VMY YYFL AI + W ++T +Q+AQM+VGV ++ G YY A C +D LK + ++Y+SY LF++F I+R Sbjct: 56 VMKNFAPFGLNNALAAWNFGLALFSAIGSIRTVPFLLNSLVTRGVYFNVCSEAFPHYGRGPVGLWVTLFIFSKIPELIDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPMGLFFVAMNYTVHAVMYFYYFLAAIGIRAPWAK--FVTVIQLAQMVVGVAVSVAGVYYIRSGAPCLLDRENLKWAIIMYSSYFALFLKFFIER 260
BLAST of NO12G02800 vs. NCBI_GenBank
Match: OEU18932.1 (GNS1/SUR4 membrane protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 183.0 bits (463), Expect = 1.100e-42 Identity = 96/212 (45.28%), Postives = 133/212 (62.74%), Query Frame = 0 Query: 9 MKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVC------TAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 M+NR +L + +AFWN L+V+S IG R +P LL + + ++ +C A Y G G++GLW LF LSK EL+DT FI + K IFLHWYHH++VL + W ++ + G++F MNY+VH+ MY YYFLMA+K +PKW NPI IT QI+QM+VGV +T GFYY D TC + + V+Y SYL+LF++F R Sbjct: 74 MRNREPFNLRRLMAFWNLALSVFSWIGMFRTLPQLLHNLYHLSMRDNLCMDSRETIASY---GSGSSGLWFLLFVLSKFPELIDTFFIVIHKKPLIFLHWYHHITVLLYCWHSYVTTSPLGIFFSVMNYSVHASMYGYYFLMAMKMRPKWFNPIIITIFQISQMVVGVSVTLAGFYYYKTDPTCGIQNENNTAAFVMYGSYLFLFLQFFFGR 282
BLAST of NO12G02800 vs. NCBI_GenBank
Match: XP_009843855.1 (hypothetical protein H257_16934 [Aphanomyces astaci] >ETV66627.1 hypothetical protein H257_16934 [Aphanomyces astaci]) HSP 1 Score: 182.6 bits (462), Expect = 1.500e-42 Identity = 97/207 (46.86%), Postives = 131/207 (63.29%), Query Frame = 0 Query: 8 IMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAH-EAAHAGMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 +MK L+ LA WN LAV+STIG+IR VP LL + T VC+ + G G GLWVTLF SK+ ELVDT+FI L+ K IFLHWYHH++VL F W A+ + G++F+ MNYTVH+VMY YYFL AI + W ++T +Q+ QM+VGV ++ G YY A C +D LK + ++Y+SY LF++F I+R Sbjct: 56 VMKKFSPFGLTSALALWNLGLAVFSTIGSIRTVPFLLNSLFTRGVYHNVCSEAFPHYGRGPVGLWVTLFIFSKIPELVDTMFIVLRKKPLIFLHWYHHITVLMFCWHAYANLSPMGLFFVAMNYTVHAVMYFYYFLAAIGIRAPWAK--FVTVIQLTQMVVGVAVSVAGVYYIRSGAPCLLDRENLKWAIIMYSSYFALFLKFFIER 260
BLAST of NO12G02800 vs. NCBI_GenBank
Match: XP_009526018.1 (hypothetical protein PHYSODRAFT_544717 [Phytophthora sojae] >EGZ16960.1 hypothetical protein PHYSODRAFT_544717 [Phytophthora sojae]) HSP 1 Score: 180.6 bits (457), Expect = 5.600e-42 Identity = 96/208 (46.15%), Postives = 126/208 (60.58%), Query Frame = 0 Query: 7 RIMKNRPVKDLSKPLAFWNFFLAVYSTIGAIRVVPHLLWFISTHTFKETVCTAPYRINGDGATGLWVTLFTLSKVVELVDTLFICLKGKKPIFLHWYHHVSVLYFTWAAHEAAHA-GMYFIGMNYTVHSVMYSYYFLMAIKAKPKWLNPIYITFMQIAQMIVGVIITAFGFYYSSKDATCAVDPFVLKISGVIYASYLYLFMEFMIKR 214 R+M++ +L PLA WN LA +S IGA R VP L+ + +VC P G G LWV LF SKV ELVDT FI L+ K IFLHWYHH++VL F W A A G+YF+ MNY+VH++MY YYFL A +P+W +T Q++QM VGV + YY + ATC+VDP LK ++Y+SY LF++F I+R Sbjct: 62 RVMRDLKPFNLKVPLALWNLALATFSAIGASRTVPFLINTVYRRGVYHSVCAPPTPHYGHGPVALWVMLFIFSKVPELVDTAFIVLRKKPLIFLHWYHHITVLLFCWHAFATLSASGLYFVAMNYSVHAIMYFYYFLTACGYRPRWAR--LVTIFQLSQMGVGVAVCGLNVYYMKQGATCSVDPDNLKWGIIMYSSYFALFLKFFIER 267 The following BLAST results are available for this feature:
BLAST of NO12G02800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO12G02800 ID=NO12G02800|Name=NO12G02800|organism=Nannochloropsis oceanica|type=gene|length=2809bpback to top protein sequence of NO12G02800.2 >NO12G02800.2-protein ID=NO12G02800.2-protein|Name=NO12G02800.2|organism=Nannochloropsis oceanica|type=polypeptide|length=242bpback to top protein sequence of NO12G02800.1 >NO12G02800.1-protein ID=NO12G02800.1-protein|Name=NO12G02800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=324bpback to top Synonyms
Publications
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