NO12G02230, NO12G02230 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO12G02230
Unique Name	NO12G02230
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2882
Alignment location	chr12:636464..639345 +

Link to JBrowse

Properties


Property Name	Value
Description	Cell cycle arrest protein BUB3

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr12	genome	chr12:636464..639345 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036322	WD40_repeat_dom_sf
IPR017986	WD40_repeat_dom
IPR001680	WD40_repeat

Homology

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_005853641.1 (cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526] >XP_005856120.1 cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526] >EKU20256.1 cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526] >EKU22722.1 cell cycle arrest protein BUB3 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 589.3 bits (1518), Expect = 1.000e-164
Identity = 279/318 (87.74%), Postives = 300/318 (94.34%), Query Frame = 0

Query:    1 MEPGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPRTQGEARSLPTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQGDLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLRCPLEGE 319
            MEPGSER L+NP QDGISSLAFSPSSSNLLL+SSWDKTARLYD +SN+AKGIW+NHAAVLDC VQDDHTGFSGGLDRAVR IYLN+PEDPGLNIGSHA  VSCMEFSRELGALVTGGWDG+VH+WDPR+QG A+SLP SEKVFTLAVSG R+VVGTSDRSVLIYDVRKL+ P+DRRESSLKHQTRCIRI+PD+SGYVLASVEGRVAVEYFD S  VQA+RYAFKCHRQ DLV+PVNAVAFHPTHGTFATGGCD MVYTWDGQNKKRLA LGPYKTSIAAL+YNFDGSL+A+AASYTYEEGE+EHP DAVYLRCPLEGE
Sbjct:    1 MEPGSERLLDNPPQDGISSLAFSPSSSNLLLVSSWDKTARLYDTSSNVAKGIWQNHAAVLDCTVQDDHTGFSGGLDRAVRKIYLNQPEDPGLNIGSHAGEVSCMEFSRELGALVTGGWDGNVHIWDPRSQGRAQSLPPSEKVFTLAVSGQRLVVGTSDRSVLIYDVRKLSAPDDRRESSLKHQTRCIRIAPDHSGYVLASVEGRVAVEYFDLSTEVQAQRYAFKCHRQDDLVYPVNAVAFHPTHGTFATGGCDAMVYTWDGQNKKRLAHLGPYKTSIAALSYNFDGSLMAIAASYTYEEGEKEHPPDAVYLRCPLEGE 318

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: EWM25818.1 (mitotic checkpoint protein bub3 [Nannochloropsis gaditana])

HSP 1 Score: 587.8 bits (1514), Expect = 3.000e-164
Identity = 278/318 (87.42%), Postives = 300/318 (94.34%), Query Frame = 0

Query:    1 MEPGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPRTQGEARSLPTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQGDLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLRCPLEGE 319
            MEPGSER L+NP QDGISSLAFSPSSSNLLL+SSWDKTARLYD +SN+AKGIW+NHAAVLDC VQDDHTGFSGGLDRAVR IYLN+PEDPGLNIGSHA  VSCMEFSRELGALVTGGWDG+VH+WDPR+QG A+SLP SEKVFTLAVSG R+VVGTSDRSVLIYDVRKL+ P+DRRESSLKHQTRCIRI+PD+SGYVLASVEGRVAVEYFD S  VQA+RYAFKCHR+ DLV+PVNAVAFHPTHGTFATGGCD MVYTWDGQNKKRLA LGPYKTSIAAL+YNFDGSL+A+AASYTYEEGE+EHP DAVYLRCPLEGE
Sbjct:    1 MEPGSERLLDNPPQDGISSLAFSPSSSNLLLVSSWDKTARLYDTSSNVAKGIWQNHAAVLDCTVQDDHTGFSGGLDRAVRKIYLNQPEDPGLNIGSHAGEVSCMEFSRELGALVTGGWDGNVHIWDPRSQGRAQSLPPSEKVFTLAVSGQRLVVGTSDRSVLIYDVRKLSAPDDRRESSLKHQTRCIRIAPDHSGYVLASVEGRVAVEYFDLSTEVQAQRYAFKCHRRDDLVYPVNAVAFHPTHGTFATGGCDAMVYTWDGQNKKRLAHLGPYKTSIAALSYNFDGSLMAIAASYTYEEGEKEHPPDAVYLRCPLEGE 318

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: OWM79169.1 (hypothetical protein CDL15_Pgr003340 [Punica granatum] >PKI71373.1 hypothetical protein CRG98_008232 [Punica granatum])

HSP 1 Score: 352.4 bits (903), Expect = 2.100e-93
Identity = 170/319 (53.29%), Postives = 227/319 (71.16%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DG+S+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +  AVLDC   DD +GFS   D  VR +  N  ++  L  G H  PV C+E+S   G ++TG WD  +  WDPR   G+ R+L    P  E++++L++ GNR+VV T+ R V IYD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FD S A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYTYEEG++ H  DA+++R
Sbjct:    7 PAASRELSNPPSDGVSNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFMHGGAVLDCCFHDDSSGFSASADNTVRRLVFNHGKEDIL--GKHEAPVRCVEYSYSAGQVITGSWDKKLKCWDPRGASGQERTLVGTYPQPERIYSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTYEEGDKPHEPDAIFVR 322

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_004152275.2 (PREDICTED: mitotic checkpoint protein BUB3.2 [Cucumis sativus] >KGN52771.1 hypothetical protein Csa_4G000900 [Cucumis sativus])

HSP 1 Score: 352.1 bits (902), Expect = 2.800e-93
Identity = 171/319 (53.61%), Postives = 228/319 (71.47%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TGGWD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TS+AAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PAAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GRHDAPVRCVEYSYAAGQLITGGWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSVAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_022923024.1 (mitotic checkpoint protein BUB3.2 [Cucurbita moschata])

HSP 1 Score: 350.9 bits (899), Expect = 6.200e-93
Identity = 171/319 (53.61%), Postives = 227/319 (71.16%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    8 PPAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSASVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 323

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_002300265.2 (mitotic checkpoint protein BUB3.2 [Populus trichocarpa] >XP_011030351.1 PREDICTED: mitotic checkpoint protein BUB3.2-like [Populus euphratica] >XP_011012431.1 PREDICTED: mitotic checkpoint protein BUB3.2 [Populus euphratica] >PNT57360.1 hypothetical protein POPTR_001G295100v3 [Populus trichocarpa])

HSP 1 Score: 350.5 bits (898), Expect = 8.100e-93
Identity = 172/319 (53.92%), Postives = 228/319 (71.47%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P S R L NP  DGIS+L FS + S+LLL+SSWDKT RLYDA++N  +G + +  AVLDC   DD +GFS   D  VR +  N  ++  L  G H  PV C+E+S   G ++TG WD  +  WDPR   G+ R+L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y +S+AAL+++ DG LLA+A+SYTYEEG++ H  DA+++R
Sbjct:    8 PFSGRELSNPPTDGISNLRFS-NHSDLLLVSSWDKTVRLYDASANALRGEFLHGGAVLDCCFHDDSSGFSASGDNTVRRLVFNHGKEDIL--GRHDAPVRCIEYSYAAGQVITGSWDKTLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSLPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPVYGTFATGGCDGFVNVWDGNNKKRLYQYSKYPSSVAALSFSRDGRLLAVASSYTYEEGDKPHEPDAIFVR 323

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_008454389.1 (PREDICTED: mitotic checkpoint protein BUB3.2 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.100e-92
Identity = 171/319 (53.61%), Postives = 227/319 (71.16%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PAAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GRHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_022149336.1 (mitotic checkpoint protein BUB3.2 [Momordica charantia])

HSP 1 Score: 350.1 bits (897), Expect = 1.100e-92
Identity = 170/319 (53.29%), Postives = 226/319 (70.85%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A Q K+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PAAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSASVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQTKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_022984956.1 (mitotic checkpoint protein BUB3.2 [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 1.400e-92
Identity = 171/319 (53.61%), Postives = 227/319 (71.16%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DGIS+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    7 PPAGRELSNPPSDGISNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 322

[Close]

BLAST of NO12G02230 vs. NCBI_GenBank
Match: XP_023551963.1 (mitotic checkpoint protein BUB3.2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 349.4 bits (895), Expect = 1.800e-92
Identity = 170/319 (53.29%), Postives = 227/319 (71.16%), Query Frame = 0

Query:    3 PGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAKGIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKPVSCMEFSRELGALVTGGWDGHVHVWDPR-TQGEARSL----PTSEKVFTLAVSGNRIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLASVEGRVAVEYFDPSPAVQAKRYAFKCHRQG----DLVFPVNAVAFHPTHGTFATGGCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEGEREHPIDAVYLR 313
            P + R L NP  DG+S+L FS + S+ LL+SSWDKT RLYDA++N+ +G + +   VLDC   DD +GFS  +D  VR +  N  ++  L  G H  PV C+E+S   G L+TG WD  +  WDPR   G+  +L    P  E+V++L++ GNR+VV T+ R V +YD+R ++ PE RRESSLK+QTRC+R  P+ +GY L+SVEGRVA+E+FDPS A QAK+YAFKCHR+     D+V+PVNA+AFHP +GTFATGGCDG V  WDG NKKRL Q   Y TSIAAL+++ DG LLA+A+SYT+EEG++ H  DA+Y+R
Sbjct:    8 PPAGRELSNPPSDGVSNLRFS-NHSDHLLVSSWDKTVRLYDASANVLRGEFVHGGPVLDCCFHDDSSGFSVSVDNTVRRLVFNHNKEDIL--GKHDAPVRCVEYSYAAGQLITGSWDKTLKCWDPRGASGQEHTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDPSEASQAKKYAFKCHRKSEAGRDIVYPVNAIAFHPIYGTFATGGCDGYVNVWDGNNKKRLYQYSKYPTSIAALSFSRDGRLLAVASSYTFEEGDKPHEPDAIYVR 323

The following BLAST results are available for this feature:

BLAST of NO12G02230 vs. NCBI_GenBank

BLAST of NO12G02230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_005853641.1	1.000e-164	87.74	cell cycle arrest protein BUB3 [Nannochloropsis ga...	[more]
EWM25818.1	3.000e-164	87.42	mitotic checkpoint protein bub3 [Nannochloropsis g...	[more]
OWM79169.1	2.100e-93	53.29	hypothetical protein CDL15_Pgr003340 [Punica grana...	[more]
XP_004152275.2	2.800e-93	53.61	PREDICTED: mitotic checkpoint protein BUB3.2 [Cucu...	[more]
XP_022923024.1	6.200e-93	53.61	mitotic checkpoint protein BUB3.2 [Cucurbita mosch...	[more]
XP_002300265.2	8.100e-93	53.92	mitotic checkpoint protein BUB3.2 [Populus trichoc...	[more]
XP_008454389.1	1.100e-92	53.61	PREDICTED: mitotic checkpoint protein BUB3.2 [Cucu...	[more]
XP_022149336.1	1.100e-92	53.29	mitotic checkpoint protein BUB3.2 [Momordica chara...	[more]
XP_022984956.1	1.400e-92	53.61	mitotic checkpoint protein BUB3.2 [Cucurbita maxim...	[more]
XP_023551963.1	1.800e-92	53.29	mitotic checkpoint protein BUB3.2 [Cucurbita pepo ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL126	nonsL126	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL125	nonsL125	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
nonsL124	nonsL124	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR015	ncniR015	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR014	ncniR014	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR008	ngnoR008	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR007	ngnoR007	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR006	ngnoR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK010124	NSK010124	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO12G02230.1	NO12G02230.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|529379	gene_5384	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100021g16	gene4680	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO12G02230.1	NO12G02230.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO12G02230 ID=NO12G02230|Name=NO12G02230|organism=Nannochloropsis oceanica|type=gene|length=2882bp
ATGGAGCCCGGCAGTGAACGACCTTTGGAAAATCCAGCGCAGGATGGTAT
CTCCTCCTTGGCCTTCTCCCCCAGCAGCTCCAACCTCTTGCTCATTTCCT
CTTGGGACAAGACCGCCCGCTTATACGACGCGACATCCAATATCGCCAAG
GGCATTTGGAGGAACCATGCTGCCGTCTTGGACTGTGCCGTGCAAGACGA
TCATACAGGCTTTTCTGGGGGGCTTGACCGGGCGGTGCGCATgtacgttt
gaaagggggtggaagtttttgttctctagtctagtgttcagggaagaccc
tctcgtctcgcttacttacccctcacattactctcccctcggacgactca
gGATTTACTTAAACCGTCCCGAGGACCCTGGTTTGAACATTGGGAGCCAC
GCGAAGCCCGTGAGCTGCATGGAGTTTTCGAGGGAGTTGGGTGCCTTGGT
CACGGGTGGATGGGACGGCCATGTGCACGTTTGgtaaggagaagaaagga
ggagcaaaagaagaaagggaggaaagatcagtaagataggaaggtgatgg
agagttttgaaaataggggcatattagtaaccggttacaggcatgcgctg
taagagaaagaaatacagctcctctcctaacccgtgctcacaacacccct
ccctgacacaattggatataaatagGGATCCACGCACACAAGGAGAGGCA
CGAAGCTTACCGACATCGGAAAAAGTCTTTACATTGGCAGTGTCGGGTAA
CCGCATTGTGGTCGGCACTTCAGACCGTTCCGTCCTCATTTACGACGTAA
Ggtacgtttggttttaatttttgttgcaggaaagtaggcggtaaacgcgc
ggaccagcactcaatattaaatcaaattgctggttgtgggccattttcac
ttacatgcacgaatatacagAAAGCTGAACGACCCAGAGGACCGGCGGGA
GTCCTCCCTGAAACACCAAACCCGATGCATCCGTATATCCCCCGATAACA
GCGgtgagtagttcttgctcgtccttgcctggttgatcgcaacatcaggc
atgattcatggtcgcatctatcttatttacttttgggtgcggtgtcatgc
cgtacaatcaggaaagacacccactcgacattttcatcctgtctttctgc
ccaaacataatgtgtccctcatgccatcttccccgcactcttatttaccg
tgttagGCTACGTCCTTGCCTCCGTAGAAGGCCGCGTGGCAGTCGAGTAT
TTTGACCCCTCCCCGGCTGTCCAAGCTAAGCGATATGCCTTCAAATGCCA
CCGACAGGGCGACCTCGTATTCCCCGTCAATGCTGTGGCCTTCCATCCCA
CTCACGGCACATTCGCTACGGGTGGTTGTGACGGGATGGTGTATACATGG
GACGGACAGAACAAGAAGAGGCTGGCACAACTGGGGCCTTACAAGACGAG
CATTGCTGCGCTTGCGTACAACTTTGATGGGTCACTTTTGGCCTTGGCTG
CGTCATACACCTATGAGGAGGGCGAGAGAGAGCATCCCATCGATGCGGTG
TATTTGCGTTGCCCACTTGAGGGTGAGgtcaggcgcaaggtcaaggccgc
agggtgagtgggtggctttgcaaaattttagagagaagtaggagggacgg
ggtgtaaaaggatgcaaattcaaactaaaagacagatttaaaagcatgaa
gtcacaaagataccaggaacaaatatttaatctatatggggctatgcgta
tagagtatctcgaggcggaaaggggagttgatgtgtacttgaatgaccgt
ggggggcgaaaaaaggttagctaccctagggattgccgcagacatggtgt
tcctccgcattggacggaagcttgacggcggtgaggatgatgcagagggt
gaatatgacgaggataaataacagatctctagaaaagtgcgaacaccatc
attctaatgttatcgtgtctaccacatgtccaacacacccgagattcaca
cacaaagaggagccttttgcccaatatcaattcctttttactcgtcgcct
acacactcgtcctatggtgtttttatgagtgagaggggtggctttagcaa
tcgaaaaagcgcgtctgatctgccttctgccatcctttcccggtccgatc
agcaccgcgactgcaacttacattttgccactttgccacggacaacacca
cactctccattagagccgtcattggaccaaagagggcaccttgcctaccc
atgatacatgtgtgcgtgcaccaccatgatgtgtcattggcccctcttgt
tggtgggctcatcctacccactttttatcttggaacgccctcctgaagga
ggagaaggagggggaggacgagggaaaggagggggaggaagaggaggagg
gagaggatcagtagCAGGAGGAGGAGGAGGGAAAGGAGAAGGAGAAGGAG
AAGGAGGGGGGGGTGGAGGAGGAGGTGGACGAGGAGGAGGTGGACGAGGA
AGTGGACGAGAAAGAGGGGGACGAGAAGGGAGACGAGGAGAAGAAGAGGA
AGAAGAAGGAGGAGGGAGAGACGGAGGGAGACGAGGAGTGGGTGGAAGGG
GAAGGGGAGGAGAAGAAGGAGGCGGTGGAAGCAGAGGGGGATGAGAAGCA
GCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGGGGAAGAGGAGG
AGGAGGAAGAGAAAGGGGAGGAGGAGGCGGAGGCGGTGGAAGCAGAGGAG
GAGAGGGGGGAAGGAGGAGGAGGAGGAGGAGGAGGTCACGGGCGGGCCAT
CCGAGGACTTTGTTGGTGTGACACCTGTGAACAATTCTTGTCCCGGGACG
GCAATGGGGCACGTAACATCCTGCGGGTGTAA

protein sequence of NO12G02230.1

>NO12G02230.1-protein ID=NO12G02230.1-protein|Name=NO12G02230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=474bp
MEPGSERPLENPAQDGISSLAFSPSSSNLLLISSWDKTARLYDATSNIAK
GIWRNHAAVLDCAVQDDHTGFSGGLDRAVRMIYLNRPEDPGLNIGSHAKP
VSCMEFSRELGALVTGGWDGHVHVWDPRTQGEARSLPTSEKVFTLAVSGN
RIVVGTSDRSVLIYDVRKLNDPEDRRESSLKHQTRCIRISPDNSGYVLAS
VEGRVAVEYFDPSPAVQAKRYAFKCHRQGDLVFPVNAVAFHPTHGTFATG
GCDGMVYTWDGQNKKRLAQLGPYKTSIAALAYNFDGSLLALAASYTYEEG
EREHPIDAVYLRCPLEGEQEEEEGKEKEKEKEGGVEEEVDEEEVDEEVDE
KEGDEKGDEEKKRKKKEEGETEGDEEWVEGEGEEKKEAVEAEGDEKQQEE
EEEEEEEEKGEEEEEEEKGEEEAEAVEAEEERGEGGGGGGGGHGRAIRGL
CWCDTCEQFLSRDGNGARNILRV*

Synonyms

Publications