NO12G01860, NO12G01860 (gene) Nannochloropsis oceanica

Overview
NameNO12G01860
Unique NameNO12G01860
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1953
Alignment locationchr12:535569..537521 -

Link to JBrowse

Properties
Property NameValue
DescriptionMethyltransferase type 11
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr12genomechr12:535569..537521 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR025714Methyltranfer_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
BLAST of NO12G01860 vs. NCBI_GenBank
Match: XP_005856121.1 (methyltransferase type 11 [Nannochloropsis gaditana CCMP526] >EKU20257.1 methyltransferase type 11 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 411.8 bits (1057), Expect = 1.600e-111
Identity = 197/255 (77.25%), Postives = 215/255 (84.31%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT+EQLAVARAHVDWHM+RYGY K NVTF  GVIEDL S+GI DA+VDVCVSNCVLNLSP+K QVL EIFRVLKPGGELYFSDVFCDRRLP  L+ DQEVLGECLGGALYIED RRLL +LGCKD+R+M++ EIQ+TDE IAAKVGLARF SLTLRCFKLP LEDRCE+FGQFATY GT+   PV+F+LD  H+FE GRA AVCGNTA MLT TRFAPHF V GDTSVHYGLF  SGV    P  +  S FGACC
Sbjct:  100 MTEEQLAVARAHVDWHMERYGYDKANVTFRHGVIEDLASMGIADASVDVCVSNCVLNLSPDKAQVLREIFRVLKPGGELYFSDVFCDRRLPGTLREDQEVLGECLGGALYIEDVRRLLAELGCKDYRIMEQTEIQITDEAIAAKVGLARFFSLTLRCFKLPELEDRCEDFGQFATYLGTLD--PVSFELDQGHQFEAGRARAVCGNTAAMLTHTRFAPHFSVTGDTSVHYGLFGSSGVLVSSP-HTIGSTFGACC 351          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: EWM25846.1 (arsenite methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 353.6 bits (906), Expect = 5.100e-94
Identity = 167/212 (78.77%), Postives = 186/212 (87.74%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLT 213
            MT+EQLAVARAHVDWHM+RYGY K NVTF  GVIEDL S+GI DA+VDVCVSNCVLNLSP+K QVL EIFRVLKPGGELYFSDVFCDRRLP  L+ DQEVLGECLGGALYIED RRLL +LGCKD+R+M++ EIQ+TDE IAAKVGLARF SLTLRCFKLP LEDRCE+FGQFATY GT+   PV+F+LD  H+FE GRA AVCGNTA M++
Sbjct:  162 MTEEQLAVARAHVDWHMERYGYDKANVTFRHGVIEDLASMGIADASVDVCVSNCVLNLSPDKAQVLREIFRVLKPGGELYFSDVFCDRRLPGTLREDQEVLGECLGGALYIEDVRRLLAELGCKDYRIMEQTEIQITDEAIAAKVGLARFFSLTLRCFKLPELEDRCEDFGQFATYLGTLD--PVSFELDQGHQFEAGRARAVCGNTAAMVS 371          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: WP_020157195.1 (methyltransferase domain-containing protein [Methylobacter marinus])

HSP 1 Score: 328.2 bits (840), Expect = 2.300e-86
Identity = 155/255 (60.78%), Postives = 187/255 (73.33%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT  QL VAR H DWH +RYGY + NV FL+G IEDL S+GI D  +DV VSNCV+NLSP+K QVL+EIFRVLKPGGELYFSDV+ DRR+PAALK D  +LGECLGGALY EDFRR++ DLGC D R++    I + D  ++AK+G+  F S+T+R FK+P LEDRCE+FGQ A YKGT++  P  FDLDD H FETGR + VCGNTA ML  +R+A HF + GD S H+GLF     CAPP +  S     ACC
Sbjct:   99 MTQAQLDVARRHCDWHAERYGYERSNVEFLQGQIEDLASIGIADNAIDVVVSNCVINLSPDKKQVLAEIFRVLKPGGELYFSDVYADRRIPAALKLDPVLLGECLGGALYWEDFRRIMQDLGCPDVRIVKDNPIALDDPEVSAKIGMVNFRSITVRAFKMP-LEDRCEDFGQVAVYKGTLSEQPHFFDLDDHHHFETGRPLRVCGNTADMLGASRYAGHFDIWGDKSTHFGLFD----CAPPNKSLSVESGAACC 348          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: WP_036247103.1 (MULTISPECIES: methyltransferase domain-containing protein [Methylobacter])

HSP 1 Score: 327.8 bits (839), Expect = 3.000e-86
Identity = 155/255 (60.78%), Postives = 187/255 (73.33%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT  QL VAR H DWH +RYGY++ NV FL+G IEDL S+GI D  +DV VSNCV+NLSP+K QVL+EIFRVLKPGGELYFSDV+ DRR+PAALK D  +LGECLGGALY EDFRR++ DLGC D R++    I + D  ++AK+G+  F S+T+R FK+P LEDRCE+FGQ A YKGT+   P  FDLDD H FETGR + VCGNTA ML  +R+A HF + GD S H+GLF     CAPP +  S     ACC
Sbjct:   99 MTQAQLDVARRHCDWHAERYGYARSNVEFLQGQIEDLASIGIADNAIDVVVSNCVINLSPDKKQVLAEIFRVLKPGGELYFSDVYADRRIPAALKLDPVLLGECLGGALYWEDFRRIMQDLGCPDVRIVKDNPIALDDPEVSAKIGMVNFRSITVRAFKMP-LEDRCEDFGQVAVYKGTLPEQPHFFDLDDHHHFETGRPLRVCGNTADMLGASRYAGHFDIWGDKSTHFGLFD----CAPPNKSLSVESGAACC 348          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: WP_031435552.1 (methyltransferase domain-containing protein [Methylomarinum vadi])

HSP 1 Score: 325.1 bits (832), Expect = 2.000e-85
Identity = 150/255 (58.82%), Postives = 189/255 (74.12%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT+EQLAVA+ H DWH +RYGY++ NV F+ G+IEDL + GI D ++DV VSNCV+NLSP+K +VL EIFRVLKPGGELYFSDV+ DRR+P AL+ D  +LGECLGGALY EDFRR++ +LGC D RV+ +  I + D  +AAK+G+  F S+T+R FK+P LEDRCE+FGQ A YKGT+   P AFDLDD H  ETGR + +CGNTA M+  +R+A HF +VGD S H+GLF     CAPP    +     ACC
Sbjct:   99 MTEEQLAVAKRHCDWHAERYGYAQSNVEFIYGLIEDLATAGIADNSIDVVVSNCVINLSPDKRRVLKEIFRVLKPGGELYFSDVYADRRIPPALRTDPVLLGECLGGALYWEDFRRIMQELGCPDVRVVKENPINLDDPEVAAKIGMVHFRSVTVRAFKMP-LEDRCEDFGQIAVYKGTIGEHPHAFDLDDHHHLETGRPLRICGNTADMIGSSRYATHFDIVGDKSTHFGLFD----CAPPNTSRNLESGSACC 348          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: WP_091238800.1 (methyltransferase domain-containing protein [Aquimonas voraii] >SDD19840.1 Methyltransferase domain-containing protein [Aquimonas voraii])

HSP 1 Score: 323.2 bits (827), Expect = 7.400e-85
Identity = 148/255 (58.04%), Postives = 193/255 (75.69%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT EQL VAR H  W  +RYG+++ NV F++G IEDL + GI DA+VDV VSNCVLNL+P+K +V +EIFRVLKPGGELYFSDVF DRR+P AL+GD  +LGECLGGALY+EDFRR++  +GC D RV+ +A I + D  I A++G+ RF S+T+R FKL  LEDRCE++GQ ATY+G+++  P AF+LDD HRFETGR + VCGN+  ML  TR+APHF ++GD   H+GLF     CAP    + +++ G+CC
Sbjct:   99 MTSEQLEVARRHQAWQAERYGHARSNVRFIEGYIEDLAACGIADASVDVVVSNCVLNLAPDKARVFAEIFRVLKPGGELYFSDVFADRRIPEALRGDPVLLGECLGGALYVEDFRRVMAAVGCADARVVSRAPIPLLDPAIEARLGMVRFESITVRAFKL-DLEDRCEDYGQLATYRGSLSQAPHAFELDDHHRFETGRPLRVCGNSFDMLASTRYAPHFDLIGDKRTHFGLFD----CAPAAAAARSTEGGSCC 348          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: WP_087142031.1 (methyltransferase domain-containing protein [Crenothrix polyspora] >SJM89210.1 Arsenite methyltransferase [Crenothrix polyspora])

HSP 1 Score: 322.4 bits (825), Expect = 1.300e-84
Identity = 151/255 (59.22%), Postives = 191/255 (74.90%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT+EQL VA++H DWH +RYGY++ NV FL G IEDL +VGI+D +VDV VSNCV+NLS NK +VL+EIFRVLKPGGELYFSDV+ DRR+P ALK D  +LGECL GALY EDFRR++ DLGC D RV+ +  I + D  +AAK+G+  F S+T+R FK+P LEDRCE+FGQ A YKGT+T  P AFDLDD H  ETG+ + +CGN+A ML+ +R+A HF+  GD + H+GLF     CAPP +    +   ACC
Sbjct:   99 MTEEQLTVAKSHSDWHSERYGYARSNVEFLHGHIEDLSAVGIRDNSVDVVVSNCVINLSSNKHKVLAEIFRVLKPGGELYFSDVYADRRIPPALKLDPVLLGECLSGALYWEDFRRIMQDLGCPDMRVVKENPITLDDTEVAAKIGMVGFRSVTVRAFKMP-LEDRCEDFGQLAVYKGTLTQHPHAFDLDDHHHLETGKPLRICGNSADMLSKSRYAEHFQFWGDKTTHFGLFD----CAPPNKGQLTASGAACC 348          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: WP_027157002.1 (methyltransferase domain-containing protein [Methylobacter luteus])

HSP 1 Score: 321.6 bits (823), Expect = 2.200e-84
Identity = 153/255 (60.00%), Postives = 186/255 (72.94%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT  QL VAR H DWH +RYGY+  NV FL+G IEDL S+GI D ++DV VSNCV+NLSP+K QVL+E+FRVLKPGGELYFSDV+ DRR+PAAL+ D  +LGECLGGALY EDFRR++ DLGC D R +    I + D  + AK+G+  F S+T+R FK+P LEDRCE+FGQ A YKGT+   P  FDLDD H FETGR + VCGNTA ML  +R+A HF++ GD S H+GLF     CAPP +  S     ACC
Sbjct:   99 MTQAQLDVARRHCDWHAERYGYACSNVEFLQGRIEDLASIGIADNSIDVVVSNCVINLSPDKKQVLAEVFRVLKPGGELYFSDVYADRRIPAALRQDPVLLGECLGGALYGEDFRRIMHDLGCPDVRTVKGNPITLGDPEVLAKIGMVNFRSVTVRAFKMP-LEDRCEDFGQVAVYKGTLPESPHFFDLDDHHHFETGRPLRVCGNTADMLGMSRYAEHFEIWGDKSTHFGLFD----CAPPNKSLSVESGAACC 348          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: PKM12453.1 (methyltransferase type 11 [Gammaproteobacteria bacterium HGW-Gammaproteobacteria-3])

HSP 1 Score: 321.6 bits (823), Expect = 2.200e-84
Identity = 152/255 (59.61%), Postives = 187/255 (73.33%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MT EQLAVA+ H  WH +RYGY++ NV F++  IEDL + GI D ++DV VSNCV+NLSP+K QVL+EIFRVLKPGGELYFSDV+ DRR+P ALK D  +LGECLGGALY EDFRR++ DLGC D R++  + I + D  +AAK+G+  F S+T+R FK+P LEDRCE+FGQ A YKGT+   P AFDLDD H  ETGR + VCGNTA ML  +R+A HF++ GD S H+GLF     CAPP    S     ACC
Sbjct:   99 MTPEQLAVAQRHCAWHAERYGYARSNVEFVQAYIEDLAAAGIPDNSIDVVVSNCVINLSPDKRQVLAEIFRVLKPGGELYFSDVYADRRIPQALKLDPVLLGECLGGALYWEDFRRIMQDLGCPDVRIVKDSPITLDDPEVAAKIGMVEFRSITVRAFKMP-LEDRCEDFGQVAVYKGTLPEYPHAFDLDDHHHLETGRPLRVCGNTADMLALSRYAEHFELWGDKSTHFGLFD----CAPPNTRLSLESGAACC 348          
BLAST of NO12G01860 vs. NCBI_GenBank
Match: WP_014147868.1 (methyltransferase domain-containing protein [Methylomicrobium alcaliphilum] >CCE23072.1 Arsenite methyltransferase [Methylomicrobium alcaliphilum 20Z])

HSP 1 Score: 321.2 bits (822), Expect = 2.800e-84
Identity = 149/255 (58.43%), Postives = 191/255 (74.90%), Query Frame = 0
Query:    1 MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSKFGACC 256
            MTDEQL +AR + DWH +RYGY++ NV F +G IEDL S+GI D ++DV VSNCV+NLSP+K +VLSEIFRVLKPGGELYFSDV+ DRR+P  LK +  +LGECL GA Y EDFRR L DLGC D R++ ++ I + D+ + AK+G+  F S+T+R FKLP LEDRCE+FGQ ATY+GT+ G P  FDLDD H FE+GR + VCGNTA ML  +R+  HF+++GD +VH+GLF     CAPP   ++ +   ACC
Sbjct:   99 MTDEQLDIARTYRDWHAERYGYARSNVEFRQGYIEDLASLGIADNSIDVVVSNCVVNLSPDKRRVLSEIFRVLKPGGELYFSDVYADRRIPEQLKLEPVLLGECLAGAFYWEDFRRALQDLGCPDVRIVSESPIDIDDDEVHAKIGMIGFRSVTIRVFKLP-LEDRCEDFGQVATYRGTIAGHPHFFDLDDHHHFESGRPLRVCGNTADMLGGSRYGRHFELLGDKNVHFGLFD----CAPPNSSTNLTSGAACC 348          
The following BLAST results are available for this feature:
BLAST of NO12G01860 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005856121.11.600e-11177.25methyltransferase type 11 [Nannochloropsis gaditan... [more]
EWM25846.15.100e-9478.77arsenite methyltransferase [Nannochloropsis gadita... [more]
WP_020157195.12.300e-8660.78methyltransferase domain-containing protein [Methy... [more]
WP_036247103.13.000e-8660.78MULTISPECIES: methyltransferase domain-containing ... [more]
WP_031435552.12.000e-8558.82methyltransferase domain-containing protein [Methy... [more]
WP_091238800.17.400e-8558.04methyltransferase domain-containing protein [Aquim... [more]
WP_087142031.11.300e-8459.22methyltransferase domain-containing protein [Creno... [more]
WP_027157002.12.200e-8460.00methyltransferase domain-containing protein [Methy... [more]
PKM12453.12.200e-8459.61methyltransferase type 11 [Gammaproteobacteria bac... [more]
WP_014147868.12.800e-8458.43methyltransferase domain-containing protein [Methy... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL124nonsL124Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR014ncniR014Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR006ngnoR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK010108NSK010108Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO12G01860.2NO12G01860.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO12G01860.1NO12G01860.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|592202gene_5343Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100021g3gene4667Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO12G01860.2NO12G01860.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO12G01860.1NO12G01860.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO12G01860 ID=NO12G01860|Name=NO12G01860|organism=Nannochloropsis oceanica|type=gene|length=1953bp
AGGGTCCAAATTATCTGTCCCTAGCAGCCATGTCATTATCGGTGGCCGCG
GAGGCGAATGGTATCAAGGAGAACGTCATAGAGTAAGTGCTATCTTATCG
TCGTCAACATCCCCTCCACCACCCTCTCCTCATAGTGAATAGTGAACAGG
AGTATGACGGTAGTGTAGCTTTGGGTTGTCTGGAAGACAGTTCCTAGAAA
AGCCGCTTAGATGATTATTACGAGGGTGGCGCACGAAATGATGTTCGATC
AAAGCGTACGGCGTGCCCTCTCTCTTCGAACCGACCTTATCATACACTTT
CTACATACAACACAGGTACTACGGTTCCAAGCTTAAAACAAACGCCGACC
TCAAGACTACTGCTTGTTGTACCGCCACCGTTCCTAAGAAGCTCCGAAGA
CTCCTCAAAGATGTGCACGACGAAGTTCTCGAAAAGTTTTACGGGTGCGG
CAGCCCTCTGCCTGAGGGCCTGGAGGGATGCACGGTGCTGGATATTGGCT
CCGGCTCGGGCCGGGATTGCTTCGTTGgtacgtgtctatttcttgattga
agaatcaggattaggaggatcatgcggtcggtcgagcactcggggacgga
aacgcattccgtgcgaggggatgtaggtgacaggcgggattgagcatttc
ttctgcttgctatatgcgcgtcgtccatcttccacatttttctgcatcgt
tgcttactatccttgccctcctttcgtcatagCCTCACAGCTTGTAGGTC
CGAACGGCACGGTGATCGGCGTGGACATGACGGACGAGCAGCTCGCCGTC
GCCCGCGCCCACGTGGATTGGCACATGCAACGCTACGGGTACAGCAAGCC
CAATGTCACTTTCCTCAAAGGCGTCATCGAAGACTTACTTTCCGTGGGGA
TCCAAGACGCGACTGTGGACGTATGCGTCAGCAATTGTGTGTTGAACCTC
TCCCCGAACAAGCCTCAAGTTTTATCAGAGATTTTCAGGGTGCTGAAGCC
AGGGGGCGAGTTGTACTTTTCCGATGTTTTTTGCGATCGGCGCTTGCCGG
CGGCTTTAAAGGGGGATCAAGAGGTTCTGGGAGAGTGTCTAGGTGGGGCG
TTGTATATTGgtacgttgagagggagggagggagggagggagtagaaccc
atcacctcacgcatccgcccttctctccctccgcacttccctccttccct
ccctcccttccccctaaaaagAGGATTTCCGTCGCCTCCTTGTTGACTTA
GGCTGCAAAGACTTCCGGGTCATGGACAAGGCAGAGATCCAAGTGACCGA
CGAGGGCATAGCGGCTAAAGTGGGCCTTGCCCGATTTCATTCCCTGACGT
TGCGTTGTTTCAAGCTGCCGGGGCTTGAGGACCGGTGTGAGGAGTTCGGA
CAGTTTGCGACGTACAAGGGGACGATGACGGGGATGCCGGTGGCGTTTGA
CTTGGACGACTCGCACCGGTTTGAGACGGGGCGGGCGGTGGCTGTGTGTG
GGAATACGGCCTTGATGgtacgtggatgaagagggagtggtagagggaga
gagtgtggagtgcttgtgatgtgagtcgccaacttgtgtacatgcatttg
tgccatcaacctggtcttgctctaaattaactcccctttctcccccgtac
agCTAACCGACACGCGCTTCGCCCCGCACTTTAAGGTGGTGGGAGATACG
TCGGTGCATTACGGCCTCTTTCAGGGGTCGGGTGTGTGTGCCCCCCCTCC
TGAAGAGTCATCGAACAGCAAATTTGGAGCGTGTTGTTGAGCGAGGGAGA
AGGAAGGAAGGAAGGGAGGGAGGGAGGGAGGGAATGGCTTAACTGAAGGG
ATCGAGGAAATCCGAGCAAGTAATTTGTGGGTAGAAAACGTTTTAAAAAA
AATGACAGGAAGGATTTAAAGAAATGAATGAAACAAACAAATATGTTAAA
CAA
back to top

protein sequence of NO12G01860.2

>NO12G01860.2-protein ID=NO12G01860.2-protein|Name=NO12G01860.2|organism=Nannochloropsis oceanica|type=polypeptide|length=256bp
MTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATVDVC
VSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGDQEV
LGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGLARF
HSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFETGRA
VAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESSNSK
FGACC*
back to top

protein sequence of NO12G01860.1

>NO12G01860.1-protein ID=NO12G01860.1-protein|Name=NO12G01860.1|organism=Nannochloropsis oceanica|type=polypeptide|length=359bp
MSLSVAAEANGIKENVIEYYGSKLKTNADLKTTACCTATVPKKLRRLLKD
VHDEVLEKFYGCGSPLPEGLEGCTVLDIGSGSGRDCFVASQLVGPNGTVI
GVDMTDEQLAVARAHVDWHMQRYGYSKPNVTFLKGVIEDLLSVGIQDATV
DVCVSNCVLNLSPNKPQVLSEIFRVLKPGGELYFSDVFCDRRLPAALKGD
QEVLGECLGGALYIEDFRRLLVDLGCKDFRVMDKAEIQVTDEGIAAKVGL
ARFHSLTLRCFKLPGLEDRCEEFGQFATYKGTMTGMPVAFDLDDSHRFET
GRAVAVCGNTALMLTDTRFAPHFKVVGDTSVHYGLFQGSGVCAPPPEESS
NSKFGACC*
back to top
Synonyms
Publications